ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17h15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Sh... 39 0.009
2TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.2... 37 0.056
3OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b... 35 0.13
4FOXO1_MOUSE (Q9R1E0) Forkhead box protein O1A (Forkhead in rhabd... 35 0.16
5NUAM_NEUCR (P24918) NADH-ubiquinone oxidoreductase 78 kDa subuni... 34 0.28
6SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains pro... 34 0.28
7MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (I... 33 0.48
8PPRB_MOUSE (Q925J9) Peroxisome proliferator-activated receptor-b... 33 0.81
9LCP2_HUMAN (Q13094) Lymphocyte cytosolic protein 2 (SH2 domain-c... 33 0.81
10PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor-b... 33 0.81
11CCD39_MOUSE (Q9D5Y1) Coiled-coil domain-containing protein 39 31 2.4
12IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS) 31 2.4
13AT2B3_RAT (Q64568) Plasma membrane calcium-transporting ATPase 3... 31 2.4
14CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity fa... 31 3.1
15POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Proteas... 31 3.1
16P66B_MOUSE (Q8VHR5) Transcriptional repressor p66 beta (p66/p68)... 30 4.0
17HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated c... 30 4.0
18FOXL2_HUMAN (P58012) Forkhead box protein L2 30 4.0
19SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos... 30 5.3
20PO2F1_XENLA (P16143) POU domain, class 2, transcription factor 1... 30 5.3
21SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) ... 30 5.3
22PA2G3_HUMAN (Q9NZ20) Group 3 secretory phospholipase A2 precurso... 30 5.3
23PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy... 30 5.3
24FLGH_BORPA (Q7WA92) Flagellar L-ring protein precursor (Basal bo... 30 5.3
25FLGH_BORBR (Q7WJD2) Flagellar L-ring protein precursor (Basal bo... 30 5.3
26NADC_MYCLE (P46714) Nicotinate-nucleotide pyrophosphorylase [car... 30 6.9
27TIPT_DROME (Q9U3V5) Protein tiptop 29 9.0
28NECAP_DROME (Q9VXB0) NECAP-like protein CG9132 29 9.0
29FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related p... 29 9.0
30EXO1_BRARE (Q803U7) Exonuclease 1 (EC 3.1.-.-) (Exonuclease I) 29 9.0
31LCP2_MOUSE (Q60787) Lymphocyte cytosolic protein 2 (SH2 domain-c... 29 9.0
32STE12_KLULA (Q08400) Protein STE12 29 9.0
33P66B_HUMAN (Q8WXI9) Transcriptional repressor p66 beta (p66/p68)... 29 9.0
34YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5 29 9.0
35TRI66_HUMAN (O15016) Tripartite motif protein 66 29 9.0

>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
            (Proline-rich synapse associated protein 2) (ProSAP2)
            (SPANK-2)
          Length = 1815

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
 Frame = -1

Query: 591  MLLAPPPG-----------ATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNID 445
            +L  PPPG           A+GK  S LPP P  +A + +     A TRSS +P  +   
Sbjct: 1394 LLATPPPGPGPLPTTVPSPASGKPSSELPPAPESAADSGV---EEADTRSSSDPHLETTS 1450

Query: 444  PFSDISAIERSLPSSAELGQTKSTGAGWAAF 352
              S +S++      S EL  T ++ A    F
Sbjct: 1451 TISTVSSMSTLSSESGELTDTHTSFADGHTF 1481



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>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 24/75 (32%), Positives = 37/75 (49%)
 Frame = -1

Query: 597 ASMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIE 418
           AS   APPP A+    SP   PP+ S+S R +S  +A T SS  PT+  +   + + A+ 
Sbjct: 50  ASPARAPPPQASPARASPARAPPSRSSSGRSSSARSASTTSS--PTRVYLVRATPVGAVP 107

Query: 417 RSLPSSAELGQTKST 373
                +     T++T
Sbjct: 108 IRASPARSAPATRAT 122



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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)|
           (L(1)omb) (Protein bifid)
          Length = 972

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -1

Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISA 424
           PPP   G    P+PPP N+S+S+  N+  +A    S  PT  +  P +  +A
Sbjct: 162 PPPTIVGL--PPIPPPNNNSSSSSSNNSASAAAHPSHHPTAAHHSPSTGAAA 211



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>FOXO1_MOUSE (Q9R1E0) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)|
          Length = 652

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 25/73 (34%), Positives = 37/73 (50%)
 Frame = -1

Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSS 400
           P P  TG L  P P PP+ +A+A   +G    T SS+     N+  ++D+  I +++ SS
Sbjct: 117 PQPPPTGPLSQPPPVPPSAAAAAGPLAGQPRKTSSSRRNAWGNLS-YADL--ITKAIESS 173

Query: 399 AELGQTKSTGAGW 361
           AE   T S    W
Sbjct: 174 AEKRLTLSQIYEW 186



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>NUAM_NEUCR (P24918) NADH-ubiquinone oxidoreductase 78 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-78KD) (CI-78KD)
          Length = 744

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 20/58 (34%), Positives = 25/58 (43%)
 Frame = -1

Query: 543 LPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSAELGQTKSTG 370
           + PP     S       N G  ++ EP KK I+ F    AI RS P+ A     K TG
Sbjct: 663 IEPPSLQQLSKVQLVEQNQGATATNEPLKKVIENFYFTDAISRSSPTMARCSAAKKTG 720



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>SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains protein 3 (Shank3)|
           (Proline-rich synapse-associated protein 2) (ProSAP2)
           (Fragment)
          Length = 797

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 23/75 (30%), Positives = 34/75 (45%)
 Frame = -1

Query: 576 PPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSA 397
           P  A+GK  S  PP P  +A + +     A TRSS +P  +     S +S++      S 
Sbjct: 400 PSPASGKPSSEPPPAPESAADSGVEE---ADTRSSSDPHLETTSTISTVSSMSTLSSESG 456

Query: 396 ELGQTKSTGAGWAAF 352
           EL  T ++ A    F
Sbjct: 457 ELTDTHTSFADGHTF 471



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>MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (Interferon-beta|
           promoter stimulator protein 1) (IPS-1) (Virus-induced
           signaling adapter) (CARD adapter inducing
           interferon-beta) (Cardif) (Putative
           NF-kappa-B-activating protein 031N)
          Length = 540

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = -1

Query: 549 SPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSAEL----GQT 382
           SPL    +      + S H AG  SS  P++  + P      + RS P ++ L    G  
Sbjct: 188 SPLTSSGHQEQDTELGSTHTAGATSSLTPSRGPVSPSVSFQPLARSTPRASRLPGPTGSV 247

Query: 381 KSTGAGWAA 355
            STG  +++
Sbjct: 248 VSTGTSFSS 256



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>PPRB_MOUSE (Q925J9) Peroxisome proliferator-activated receptor-binding protein|
            (PBP) (PPAR-binding protein) (Thyroid hormone
            receptor-associated protein complex 220 kDa component)
            (Trap220) (Thyroid receptor-interacting protein 2)
            (TRIP-2)
          Length = 1575

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = -1

Query: 576  PPGATGKLRSPLPP----PPNDSASARMNSG----HNAGTRSSKEPTKKNIDPFSDISAI 421
            PPG + KL SP+ P    PP+  A + ++SG    H +GT SS    K +    S  S  
Sbjct: 1200 PPGGSDKLASPMKPVPGTPPSSKAKSPISSGSSGSHVSGT-SSSSGMKSSSGSASSGSVS 1258

Query: 420  ERSLPSS 400
            +++ P+S
Sbjct: 1259 QKTPPAS 1265



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>LCP2_HUMAN (Q13094) Lymphocyte cytosolic protein 2 (SH2 domain-containing|
           leucocyte protein of 76 kDa) (SLP-76 tyrosine
           phosphoprotein) (SLP76)
          Length = 533

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
 Frame = -1

Query: 588 LLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAG-------TRSSKEPTKKNIDPF 439
           + A PP   G+  SPLPPP  +      +  H           RS+K P  +++ PF
Sbjct: 194 MAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTKPPLDRSLAPF 250



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>PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor-binding protein|
            (PBP) (PPAR-binding protein) (Thyroid hormone
            receptor-associated protein complex 220 kDa component)
            (Trap220) (Thyroid receptor-interacting protein 2)
            (TRIP-2) (p53 regulator
          Length = 1581

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = -1

Query: 576  PPGATGKLRSPLPP----PPNDSASARMNSG----HNAGTRSSKEPTKKNIDPFSDISAI 421
            PPG + KL SP+ P    PP+  A + ++SG    H +GT SS    K +    S  S  
Sbjct: 1198 PPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGT-SSSSGMKSSSGLGSSGSLS 1256

Query: 420  ERSLPSS 400
            +++ PSS
Sbjct: 1257 QKTPPSS 1263



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>CCD39_MOUSE (Q9D5Y1) Coiled-coil domain-containing protein 39|
          Length = 937

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 588  LLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTK 457
            L +PP     +LR P PPP  + +S   +SG N+     K+ +K
Sbjct: 894  LQSPPTAKVIQLRFPEPPPATNDSSRSASSGSNSNIPKEKKLSK 937



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>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)|
          Length = 1321

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -1

Query: 576  PPGATGKLRSPLPPPPND-----SASARMNSGHNAGTRSSKEP 463
            P  +   L+ PLPP P D      ASA  + G  AG+  S EP
Sbjct: 1013 PSTSPSSLQQPLPPAPGDLYRLPPASAATSQGPTAGSSMSSEP 1055



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>AT2B3_RAT (Q64568) Plasma membrane calcium-transporting ATPase 3 (EC 3.6.3.8)|
            (PMCA3) (Plasma membrane calcium pump isoform 3) (Plasma
            membrane calcium ATPase isoform 3)
          Length = 1258

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = -1

Query: 558  KLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNID--PFSDISAIERSL 409
            +LR+P PPPPN + +A ++SG    T ++K  T       P S + ++E SL
Sbjct: 1208 RLRAPPPPPPNQNNNA-IDSGIYLTTHATKSATSSAFSSRPGSPLHSMETSL 1258



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>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7|
           (Cleavage and polyadenylation specificity factor 59 kDa
           subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor
           Im 59-kDa subunit)
          Length = 471

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 21/72 (29%), Positives = 28/72 (38%)
 Frame = -1

Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSS 400
           PPP AT      + PPP+    A     H+    S   P+  +   F DI    R++ SS
Sbjct: 297 PPPNAT------VGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAISSS 350

Query: 399 AELGQTKSTGAG 364
           A         AG
Sbjct: 351 AISKAVSGASAG 362



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>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC|
           3.4.22.-) (p150); RNA-directed RNA polymerase/helicase
           (EC 2.7.7.48) (EC 3.6.1.-) (p90)]
          Length = 2115

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -1

Query: 582 APPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDI 430
           AP P A  +   P+PP P   A    ++        S  PT    DP SDI
Sbjct: 757 APSPPAPPRAGDPVPPIPAGPADRARDAELEVACEPSGPPTSTRADPDSDI 807



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>P66B_MOUSE (Q8VHR5) Transcriptional repressor p66 beta (p66/p68) (GATA zinc|
           finger domain-containing protein 2B)
          Length = 594

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/59 (30%), Positives = 25/59 (42%)
 Frame = -1

Query: 573 PGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSA 397
           PG   ++ SPLP P   S +A   +      R   E T   I P    + +   LPS+A
Sbjct: 327 PGTVNRVSSPLPSPSAMSDAANSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAA 385



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>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2
          Length = 863

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRS 475
           PPP A  +L+ P  PPPN +  +   S    G RS
Sbjct: 26  PPPPAPLQLQPPPAPPPNPTTPSHPESADEPGPRS 60



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>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/74 (29%), Positives = 33/74 (44%)
 Frame = -1

Query: 597 ASMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIE 418
           A  LLAP  G T  ++ P  PPP+         G   G  + ++P      P+S ++ I 
Sbjct: 12  AGALLAPETGRT--VKEPEGPPPSPG-----KGGGGGGGTAPEKPDPAQKPPYSYVALIA 64

Query: 417 RSLPSSAELGQTKS 376
            ++  SAE   T S
Sbjct: 65  MAIRESAEKRLTLS 78



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>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 19/78 (24%)
 Frame = -1

Query: 579  PPPGATGKLRSPLPPPPNDSASARMNSGH---------------NAGTRSSKEPTKKNID 445
            PP G    L +P  PPP   +S  + S                 N  +   +EPT K+ D
Sbjct: 1270 PPSGPQPNLETPPQPPPRSRSSQSLPSDSSPQLQQEQPTGQVKINGISGVKQEPTLKS-D 1328

Query: 444  PFSDIS----AIERSLPS 403
            PF D+S    A+ ++ PS
Sbjct: 1329 PFEDLSLSVLAVSKAQPS 1346



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>PO2F1_XENLA (P16143) POU domain, class 2, transcription factor 1|
           (Octamer-binding transcription factor 1) (Oct-1) (OTF-1)
           (NF-A1) (XOct1)
          Length = 760

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +2

Query: 20  GRIQVEVSMILVSVY--EIWQTQIRQIRKPTLLFRKIFRLLELLESMRVDALIDNITS 187
           G  Q +V + +  +Y  +  QT I +     L F+ + +L  LLE    DA+++NITS
Sbjct: 317 GFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVLENITS 374



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>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian
           branch point-binding protein mBBP) (BBP)
          Length = 639

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 579 PPPGATGKLRSPLPPPP 529
           PPPG+ G + +P PPPP
Sbjct: 588 PPPGSAGMMYAPPPPPP 604



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>PA2G3_HUMAN (Q9NZ20) Group 3 secretory phospholipase A2 precursor (EC 3.1.1.4)|
           (Group III secretory phospholipase A2)
           (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2)
          Length = 509

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
 Frame = -1

Query: 597 ASMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIE 418
           +S   +P P +    RSP PP P      R    H  G   SK P+K N     D     
Sbjct: 284 SSRATSPTPSS----RSPAPPKPRQKQHLRKGPPHQKG---SKRPSKANTTALQDPMVSP 336

Query: 417 RSLPSSAEL----GQTKSTGAGW 361
           R   +   L    G  K  GA W
Sbjct: 337 RLDVAPTGLQGPQGGLKPQGARW 359



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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -1

Query: 576  PPGATGKLRSPLP----PPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSL 409
            PP ++G   SP+P    PPP  + +A    G    T    E T+K I P  +  +IE++ 
Sbjct: 1034 PPASSGPKASPVPAPAEPPPQKTPTAAHAKGKKKETEVKAE-TEKQI-PEKETPSIEKTP 1091

Query: 408  PSSA 397
            P+ A
Sbjct: 1092 PAVA 1095



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>FLGH_BORPA (Q7WA92) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 230

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 588 LLAPPPGATGKLRSPLPPPPNDSA 517
           ++ P P  TG L +P PPPP  SA
Sbjct: 24  MIPPEPVVTGPLTAPPPPPPQPSA 47



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>FLGH_BORBR (Q7WJD2) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 230

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 588 LLAPPPGATGKLRSPLPPPPNDSA 517
           ++ P P  TG L +P PPPP  SA
Sbjct: 24  MIPPEPVVTGPLTAPPPPPPQPSA 47



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>NADC_MYCLE (P46714) Nicotinate-nucleotide pyrophosphorylase [carboxylating]|
           (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase)
          Length = 284

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +2

Query: 5   LSNLXGRIQVEVSMILVSVYEIWQTQI----RQIRKPTLL 112
           L  L   +  E  +IL+  + +WQTQ+    R IR PT+L
Sbjct: 204 LEQLDAMLAEEPELILLDNFPVWQTQVAVQRRDIRAPTVL 243



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>TIPT_DROME (Q9U3V5) Protein tiptop|
          Length = 1024

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = -1

Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSS 400
           P P  TG + +P  PPP   A++  NS  ++ + S+   +  +    + +      LP  
Sbjct: 347 PSPLPTGGVGTPSAPPPTRLATSASNSACSSSSSSTSSSSNSSKSELNMLIKETMPLPRK 406

Query: 399 AELGQTKSTGAG 364
              GQ    G G
Sbjct: 407 LVRGQDVWLGKG 418



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>NECAP_DROME (Q9VXB0) NECAP-like protein CG9132|
          Length = 246

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/82 (25%), Positives = 34/82 (41%)
 Frame = -1

Query: 597 ASMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIE 418
           +S +L PPPG  GK+      PP  +A+A      + G   +  P     + ++D ++  
Sbjct: 177 SSGVLPPPPGGLGKI-----APPPAAAAANTTVRQSPGVSPAHRPAAGGSE-WTDYAS-- 228

Query: 417 RSLPSSAELGQTKSTGAGWAAF 352
               +    GQ  S  A W  F
Sbjct: 229 ----AGGNQGQQNSANANWVQF 246



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>FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related protein FKHL6)|
           (Forkhead-related transcription factor 2) (FREAC-2)
           (Forkhead-related activator 2)
          Length = 444

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = -1

Query: 585 LAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLP 406
           ++P PG+T     P+P  P    +A    G + G  SS  P   +    +  SAIE   P
Sbjct: 276 MSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSP---AMASAIECHSP 332

Query: 405 SSAELGQTKSTGA 367
            ++      S GA
Sbjct: 333 YTSPAAHWSSPGA 345



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>EXO1_BRARE (Q803U7) Exonuclease 1 (EC 3.1.-.-) (Exonuclease I)|
          Length = 806

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/72 (29%), Positives = 34/72 (47%)
 Frame = -1

Query: 594 SMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIER 415
           S+  +P  G+     SP  PP  DSA    +S  +A   +S   T+ N D   +  ++  
Sbjct: 630 SLSSSPVEGSEDAGNSPGSPPSQDSAYFSQSSSISASVENSL-VTEDNSDKEKERDSVVS 688

Query: 414 SLPSSAELGQTK 379
           + PSS+ L + K
Sbjct: 689 NSPSSSPLDRLK 700



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>LCP2_MOUSE (Q60787) Lymphocyte cytosolic protein 2 (SH2 domain-containing|
           leucocyte protein of 76 kDa) (SLP-76 tyrosine
           phosphoprotein) (SLP76)
          Length = 533

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
 Frame = -1

Query: 582 APPPGATGKLRSPLPPP-PNDSASARMNSGHNAG------TRSSKEPTKKNIDP 442
           A PP  TG+  SPL PP PN    +R  +   A        RS+K P  +++ P
Sbjct: 196 ALPPLPTGRNHSPLSPPHPNHEEPSRSGNNKTAKLPAPSIDRSTKPPLDRSLAP 249



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>STE12_KLULA (Q08400) Protein STE12|
          Length = 666

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNI 448
           PPP A     +P       SA+ R  S  N   R SK P +KN+
Sbjct: 576 PPPSAMNPYYTPYHRRQPSSATRRYFSKANLINRKSKSPPRKNV 619



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>P66B_HUMAN (Q8WXI9) Transcriptional repressor p66 beta (p66/p68) (GATA zinc|
           finger domain-containing protein 2B)
          Length = 593

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = -1

Query: 573 PGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSA 397
           PG   ++ SPLP P   + +A   +      R   E T   I P    + +   LPS+A
Sbjct: 326 PGTVNRVSSPLPSPSAMTDAANSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAA 384



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>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5|
          Length = 780

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 597 ASMLLAPPPGATGKLRSPLPPPPN-DSASARMNSGHNAGTRSSKEPTKKN 451
           A++L   P G T   R+P+PP P   SA AR      A T++S  P+  N
Sbjct: 93  AALLGNTPAGGTPGYRAPVPPDPQPTSAQARNPPVTVATTQASTTPSAPN 142



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>TRI66_HUMAN (O15016) Tripartite motif protein 66|
          Length = 1214

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 13/83 (15%)
 Frame = -1

Query: 585 LAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEP---TKKNIDPF-------- 439
           L PPP        PLPPPP         S H A ++    P     +N+D          
Sbjct: 455 LPPPPPPLPHPPPPLPPPPQQPHPPLPPSQHLASSQHESPPGPACSQNMDIMHHKFELEE 514

Query: 438 --SDISAIERSLPSSAELGQTKS 376
              D+  + ++   S +L QTKS
Sbjct: 515 MQKDLELLLQAQQPSLQLSQTKS 537


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,951,782
Number of Sequences: 219361
Number of extensions: 2018081
Number of successful extensions: 7839
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 6543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7711
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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