| Clone Name | rbags17h15 |
|---|---|
| Clone Library Name | barley_pub |
>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)| (Proline-rich synapse associated protein 2) (ProSAP2) (SPANK-2) Length = 1815 Score = 39.3 bits (90), Expect = 0.009 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%) Frame = -1 Query: 591 MLLAPPPG-----------ATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNID 445 +L PPPG A+GK S LPP P +A + + A TRSS +P + Sbjct: 1394 LLATPPPGPGPLPTTVPSPASGKPSSELPPAPESAADSGV---EEADTRSSSDPHLETTS 1450 Query: 444 PFSDISAIERSLPSSAELGQTKSTGAGWAAF 352 S +S++ S EL T ++ A F Sbjct: 1451 TISTVSSMSTLSSESGELTDTHTSFADGHTF 1481
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 36.6 bits (83), Expect = 0.056 Identities = 24/75 (32%), Positives = 37/75 (49%) Frame = -1 Query: 597 ASMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIE 418 AS APPP A+ SP PP+ S+S R +S +A T SS PT+ + + + A+ Sbjct: 50 ASPARAPPPQASPARASPARAPPSRSSSGRSSSARSASTTSS--PTRVYLVRATPVGAVP 107 Query: 417 RSLPSSAELGQTKST 373 + T++T Sbjct: 108 IRASPARSAPATRAT 122
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 35.4 bits (80), Expect = 0.13 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = -1 Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISA 424 PPP G P+PPP N+S+S+ N+ +A S PT + P + +A Sbjct: 162 PPPTIVGL--PPIPPPNNNSSSSSSNNSASAAAHPSHHPTAAHHSPSTGAAA 211
>FOXO1_MOUSE (Q9R1E0) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)| Length = 652 Score = 35.0 bits (79), Expect = 0.16 Identities = 25/73 (34%), Positives = 37/73 (50%) Frame = -1 Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSS 400 P P TG L P P PP+ +A+A +G T SS+ N+ ++D+ I +++ SS Sbjct: 117 PQPPPTGPLSQPPPVPPSAAAAAGPLAGQPRKTSSSRRNAWGNLS-YADL--ITKAIESS 173 Query: 399 AELGQTKSTGAGW 361 AE T S W Sbjct: 174 AEKRLTLSQIYEW 186
>NUAM_NEUCR (P24918) NADH-ubiquinone oxidoreductase 78 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-78KD) (CI-78KD) Length = 744 Score = 34.3 bits (77), Expect = 0.28 Identities = 20/58 (34%), Positives = 25/58 (43%) Frame = -1 Query: 543 LPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSAELGQTKSTG 370 + PP S N G ++ EP KK I+ F AI RS P+ A K TG Sbjct: 663 IEPPSLQQLSKVQLVEQNQGATATNEPLKKVIENFYFTDAISRSSPTMARCSAAKKTG 720
>SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains protein 3 (Shank3)| (Proline-rich synapse-associated protein 2) (ProSAP2) (Fragment) Length = 797 Score = 34.3 bits (77), Expect = 0.28 Identities = 23/75 (30%), Positives = 34/75 (45%) Frame = -1 Query: 576 PPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSA 397 P A+GK S PP P +A + + A TRSS +P + S +S++ S Sbjct: 400 PSPASGKPSSEPPPAPESAADSGVEE---ADTRSSSDPHLETTSTISTVSSMSTLSSESG 456 Query: 396 ELGQTKSTGAGWAAF 352 EL T ++ A F Sbjct: 457 ELTDTHTSFADGHTF 471
>MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (Interferon-beta| promoter stimulator protein 1) (IPS-1) (Virus-induced signaling adapter) (CARD adapter inducing interferon-beta) (Cardif) (Putative NF-kappa-B-activating protein 031N) Length = 540 Score = 33.5 bits (75), Expect = 0.48 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Frame = -1 Query: 549 SPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSAEL----GQT 382 SPL + + S H AG SS P++ + P + RS P ++ L G Sbjct: 188 SPLTSSGHQEQDTELGSTHTAGATSSLTPSRGPVSPSVSFQPLARSTPRASRLPGPTGSV 247 Query: 381 KSTGAGWAA 355 STG +++ Sbjct: 248 VSTGTSFSS 256
>PPRB_MOUSE (Q925J9) Peroxisome proliferator-activated receptor-binding protein| (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TRIP-2) Length = 1575 Score = 32.7 bits (73), Expect = 0.81 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%) Frame = -1 Query: 576 PPGATGKLRSPLPP----PPNDSASARMNSG----HNAGTRSSKEPTKKNIDPFSDISAI 421 PPG + KL SP+ P PP+ A + ++SG H +GT SS K + S S Sbjct: 1200 PPGGSDKLASPMKPVPGTPPSSKAKSPISSGSSGSHVSGT-SSSSGMKSSSGSASSGSVS 1258 Query: 420 ERSLPSS 400 +++ P+S Sbjct: 1259 QKTPPAS 1265
>LCP2_HUMAN (Q13094) Lymphocyte cytosolic protein 2 (SH2 domain-containing| leucocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76) Length = 533 Score = 32.7 bits (73), Expect = 0.81 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Frame = -1 Query: 588 LLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAG-------TRSSKEPTKKNIDPF 439 + A PP G+ SPLPPP + + H RS+K P +++ PF Sbjct: 194 MAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPAPSIDRSTKPPLDRSLAPF 250
>PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor-binding protein| (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TRIP-2) (p53 regulator Length = 1581 Score = 32.7 bits (73), Expect = 0.81 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%) Frame = -1 Query: 576 PPGATGKLRSPLPP----PPNDSASARMNSG----HNAGTRSSKEPTKKNIDPFSDISAI 421 PPG + KL SP+ P PP+ A + ++SG H +GT SS K + S S Sbjct: 1198 PPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGT-SSSSGMKSSSGLGSSGSLS 1256 Query: 420 ERSLPSS 400 +++ PSS Sbjct: 1257 QKTPPSS 1263
>CCD39_MOUSE (Q9D5Y1) Coiled-coil domain-containing protein 39| Length = 937 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -1 Query: 588 LLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTK 457 L +PP +LR P PPP + +S +SG N+ K+ +K Sbjct: 894 LQSPPTAKVIQLRFPEPPPATNDSSRSASSGSNSNIPKEKKLSK 937
>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)| Length = 1321 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Frame = -1 Query: 576 PPGATGKLRSPLPPPPND-----SASARMNSGHNAGTRSSKEP 463 P + L+ PLPP P D ASA + G AG+ S EP Sbjct: 1013 PSTSPSSLQQPLPPAPGDLYRLPPASAATSQGPTAGSSMSSEP 1055
>AT2B3_RAT (Q64568) Plasma membrane calcium-transporting ATPase 3 (EC 3.6.3.8)| (PMCA3) (Plasma membrane calcium pump isoform 3) (Plasma membrane calcium ATPase isoform 3) Length = 1258 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = -1 Query: 558 KLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNID--PFSDISAIERSL 409 +LR+P PPPPN + +A ++SG T ++K T P S + ++E SL Sbjct: 1208 RLRAPPPPPPNQNNNA-IDSGIYLTTHATKSATSSAFSSRPGSPLHSMETSL 1258
>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7| (Cleavage and polyadenylation specificity factor 59 kDa subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor Im 59-kDa subunit) Length = 471 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/72 (29%), Positives = 28/72 (38%) Frame = -1 Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSS 400 PPP AT + PPP+ A H+ S P+ + F DI R++ SS Sbjct: 297 PPPNAT------VGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAISSS 350 Query: 399 AELGQTKSTGAG 364 A AG Sbjct: 351 AISKAVSGASAG 362
>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -1 Query: 582 APPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDI 430 AP P A + P+PP P A ++ S PT DP SDI Sbjct: 757 APSPPAPPRAGDPVPPIPAGPADRARDAELEVACEPSGPPTSTRADPDSDI 807
>P66B_MOUSE (Q8VHR5) Transcriptional repressor p66 beta (p66/p68) (GATA zinc| finger domain-containing protein 2B) Length = 594 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/59 (30%), Positives = 25/59 (42%) Frame = -1 Query: 573 PGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSA 397 PG ++ SPLP P S +A + R E T I P + + LPS+A Sbjct: 327 PGTVNRVSSPLPSPSAMSDAANSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAA 385
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRS 475 PPP A +L+ P PPPN + + S G RS Sbjct: 26 PPPPAPLQLQPPPAPPPNPTTPSHPESADEPGPRS 60
>FOXL2_HUMAN (P58012) Forkhead box protein L2| Length = 376 Score = 30.4 bits (67), Expect = 4.0 Identities = 22/74 (29%), Positives = 33/74 (44%) Frame = -1 Query: 597 ASMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIE 418 A LLAP G T ++ P PPP+ G G + ++P P+S ++ I Sbjct: 12 AGALLAPETGRT--VKEPEGPPPSPG-----KGGGGGGGTAPEKPDPAQKPPYSYVALIA 64 Query: 417 RSLPSSAELGQTKS 376 ++ SAE T S Sbjct: 65 MAIRESAEKRLTLS 78
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 19/78 (24%) Frame = -1 Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGH---------------NAGTRSSKEPTKKNID 445 PP G L +P PPP +S + S N + +EPT K+ D Sbjct: 1270 PPSGPQPNLETPPQPPPRSRSSQSLPSDSSPQLQQEQPTGQVKINGISGVKQEPTLKS-D 1328 Query: 444 PFSDIS----AIERSLPS 403 PF D+S A+ ++ PS Sbjct: 1329 PFEDLSLSVLAVSKAQPS 1346
>PO2F1_XENLA (P16143) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) (XOct1) Length = 760 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +2 Query: 20 GRIQVEVSMILVSVY--EIWQTQIRQIRKPTLLFRKIFRLLELLESMRVDALIDNITS 187 G Q +V + + +Y + QT I + L F+ + +L LLE DA+++NITS Sbjct: 317 GFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVLENITS 374
>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) Length = 639 Score = 30.0 bits (66), Expect = 5.3 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -1 Query: 579 PPPGATGKLRSPLPPPP 529 PPPG+ G + +P PPPP Sbjct: 588 PPPGSAGMMYAPPPPPP 604
>PA2G3_HUMAN (Q9NZ20) Group 3 secretory phospholipase A2 precursor (EC 3.1.1.4)| (Group III secretory phospholipase A2) (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2) Length = 509 Score = 30.0 bits (66), Expect = 5.3 Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 4/83 (4%) Frame = -1 Query: 597 ASMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIE 418 +S +P P + RSP PP P R H G SK P+K N D Sbjct: 284 SSRATSPTPSS----RSPAPPKPRQKQHLRKGPPHQKG---SKRPSKANTTALQDPMVSP 336 Query: 417 RSLPSSAEL----GQTKSTGAGW 361 R + L G K GA W Sbjct: 337 RLDVAPTGLQGPQGGLKPQGARW 359
>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) (Brain-derived HLMN protein) Length = 5038 Score = 30.0 bits (66), Expect = 5.3 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Frame = -1 Query: 576 PPGATGKLRSPLP----PPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSL 409 PP ++G SP+P PPP + +A G T E T+K I P + +IE++ Sbjct: 1034 PPASSGPKASPVPAPAEPPPQKTPTAAHAKGKKKETEVKAE-TEKQI-PEKETPSIEKTP 1091 Query: 408 PSSA 397 P+ A Sbjct: 1092 PAVA 1095
>FLGH_BORPA (Q7WA92) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 230 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 588 LLAPPPGATGKLRSPLPPPPNDSA 517 ++ P P TG L +P PPPP SA Sbjct: 24 MIPPEPVVTGPLTAPPPPPPQPSA 47
>FLGH_BORBR (Q7WJD2) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 230 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 588 LLAPPPGATGKLRSPLPPPPNDSA 517 ++ P P TG L +P PPPP SA Sbjct: 24 MIPPEPVVTGPLTAPPPPPPQPSA 47
>NADC_MYCLE (P46714) Nicotinate-nucleotide pyrophosphorylase [carboxylating]| (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase) Length = 284 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = +2 Query: 5 LSNLXGRIQVEVSMILVSVYEIWQTQI----RQIRKPTLL 112 L L + E +IL+ + +WQTQ+ R IR PT+L Sbjct: 204 LEQLDAMLAEEPELILLDNFPVWQTQVAVQRRDIRAPTVL 243
>TIPT_DROME (Q9U3V5) Protein tiptop| Length = 1024 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/72 (25%), Positives = 30/72 (41%) Frame = -1 Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSS 400 P P TG + +P PPP A++ NS ++ + S+ + + + + LP Sbjct: 347 PSPLPTGGVGTPSAPPPTRLATSASNSACSSSSSSTSSSSNSSKSELNMLIKETMPLPRK 406 Query: 399 AELGQTKSTGAG 364 GQ G G Sbjct: 407 LVRGQDVWLGKG 418
>NECAP_DROME (Q9VXB0) NECAP-like protein CG9132| Length = 246 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/82 (25%), Positives = 34/82 (41%) Frame = -1 Query: 597 ASMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIE 418 +S +L PPPG GK+ PP +A+A + G + P + ++D ++ Sbjct: 177 SSGVLPPPPGGLGKI-----APPPAAAAANTTVRQSPGVSPAHRPAAGGSE-WTDYAS-- 228 Query: 417 RSLPSSAELGQTKSTGAGWAAF 352 + GQ S A W F Sbjct: 229 ----AGGNQGQQNSANANWVQF 246
>FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related protein FKHL6)| (Forkhead-related transcription factor 2) (FREAC-2) (Forkhead-related activator 2) Length = 444 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/73 (28%), Positives = 31/73 (42%) Frame = -1 Query: 585 LAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLP 406 ++P PG+T P+P P +A G + G SS P + + SAIE P Sbjct: 276 MSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSP---AMASAIECHSP 332 Query: 405 SSAELGQTKSTGA 367 ++ S GA Sbjct: 333 YTSPAAHWSSPGA 345
>EXO1_BRARE (Q803U7) Exonuclease 1 (EC 3.1.-.-) (Exonuclease I)| Length = 806 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/72 (29%), Positives = 34/72 (47%) Frame = -1 Query: 594 SMLLAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIER 415 S+ +P G+ SP PP DSA +S +A +S T+ N D + ++ Sbjct: 630 SLSSSPVEGSEDAGNSPGSPPSQDSAYFSQSSSISASVENSL-VTEDNSDKEKERDSVVS 688 Query: 414 SLPSSAELGQTK 379 + PSS+ L + K Sbjct: 689 NSPSSSPLDRLK 700
>LCP2_MOUSE (Q60787) Lymphocyte cytosolic protein 2 (SH2 domain-containing| leucocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76) Length = 533 Score = 29.3 bits (64), Expect = 9.0 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Frame = -1 Query: 582 APPPGATGKLRSPLPPP-PNDSASARMNSGHNAG------TRSSKEPTKKNIDP 442 A PP TG+ SPL PP PN +R + A RS+K P +++ P Sbjct: 196 ALPPLPTGRNHSPLSPPHPNHEEPSRSGNNKTAKLPAPSIDRSTKPPLDRSLAP 249
>STE12_KLULA (Q08400) Protein STE12| Length = 666 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -1 Query: 579 PPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNI 448 PPP A +P SA+ R S N R SK P +KN+ Sbjct: 576 PPPSAMNPYYTPYHRRQPSSATRRYFSKANLINRKSKSPPRKNV 619
>P66B_HUMAN (Q8WXI9) Transcriptional repressor p66 beta (p66/p68) (GATA zinc| finger domain-containing protein 2B) Length = 593 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/59 (28%), Positives = 25/59 (42%) Frame = -1 Query: 573 PGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEPTKKNIDPFSDISAIERSLPSSA 397 PG ++ SPLP P + +A + R E T I P + + LPS+A Sbjct: 326 PGTVNRVSSPLPSPSAMTDAANSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAA 384
>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5| Length = 780 Score = 29.3 bits (64), Expect = 9.0 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 597 ASMLLAPPPGATGKLRSPLPPPPN-DSASARMNSGHNAGTRSSKEPTKKN 451 A++L P G T R+P+PP P SA AR A T++S P+ N Sbjct: 93 AALLGNTPAGGTPGYRAPVPPDPQPTSAQARNPPVTVATTQASTTPSAPN 142
>TRI66_HUMAN (O15016) Tripartite motif protein 66| Length = 1214 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 13/83 (15%) Frame = -1 Query: 585 LAPPPGATGKLRSPLPPPPNDSASARMNSGHNAGTRSSKEP---TKKNIDPF-------- 439 L PPP PLPPPP S H A ++ P +N+D Sbjct: 455 LPPPPPPLPHPPPPLPPPPQQPHPPLPPSQHLASSQHESPPGPACSQNMDIMHHKFELEE 514 Query: 438 --SDISAIERSLPSSAELGQTKS 376 D+ + ++ S +L QTKS Sbjct: 515 MQKDLELLLQAQQPSLQLSQTKS 537 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,951,782 Number of Sequences: 219361 Number of extensions: 2018081 Number of successful extensions: 7839 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 6543 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7711 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)