ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17h15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196996.1| Oryza sativa (japonica cultivar-group) unknown ... 109 1e-20
2dbj|AK100161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
3dbj|AK065629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
4gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 gen... 82 2e-12
5gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 gen... 82 2e-12
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
8dbj|AP000894.6| Homo sapiens genomic DNA, chromosome 18 clone:RP... 48 0.033
9gb|AC102296.6| Mus musculus chromosome 3, clone RP24-389G6, comp... 44 0.52
10gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, comple... 44 0.52
11emb|AL583830.7| Human DNA sequence from clone RP11-172L10 on chr... 44 0.52
12gb|AC099563.3| Homo sapiens chromosome 1 clone RP11-323K10, comp... 44 0.52
13gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, co... 42 2.1
14gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's ... 42 2.1
15ref|XM_610033.2| PREDICTED: Bos taurus similar to Solute carrier... 42 2.1
16gb|AC005999.2| Homo sapiens PAC clone RP4-718N17 from 7, complet... 42 2.1
17gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, comp... 42 2.1
18emb|AL832670.1|HSM803980 Homo sapiens mRNA; cDNA DKFZp313N0812 (... 42 2.1
19dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 2.1
20gb|AC083829.5| Homo sapiens BAC clone RP11-466G12 from 4, comple... 42 2.1
21gb|AC084421.4| Homo sapiens BAC clone RP11-420C12 from 4, comple... 42 2.1
22dbj|AK034696.1| Mus musculus 12 days embryo embryonic body betwe... 42 2.1
23emb|BX005236.16| Mouse DNA sequence from clone RP23-254A23 on ch... 42 2.1
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
25dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
26gb|AY111142.1| Zea mays CL9565_1 mRNA sequence 42 2.1
27gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 ... 42 2.1
28gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, com... 42 2.1
29ref|NM_016911.2| Mus musculus sushi-repeat-containing protein (S... 42 2.1
30gb|AC153985.4| Mus musculus 6 BAC RP24-507D15 (Roswell Park Canc... 40 8.1
31gb|AC169503.1| Mus musculus BAC clone RP24-281B5 from chromosome... 40 8.1
32ref|NM_145640.1| Homo sapiens apolipoprotein L, 3 (APOL3), trans... 40 8.1
33ref|NM_145639.1| Homo sapiens apolipoprotein L, 3 (APOL3), trans... 40 8.1
34ref|NM_145642.1| Homo sapiens apolipoprotein L, 3 (APOL3), trans... 40 8.1
35ref|NM_145641.1| Homo sapiens apolipoprotein L, 3 (APOL3), trans... 40 8.1
36ref|NM_014349.2| Homo sapiens apolipoprotein L, 3 (APOL3), trans... 40 8.1
37ref|NM_030644.1| Homo sapiens apolipoprotein L, 3 (APOL3), trans... 40 8.1
38gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, comp... 40 8.1
39gb|AE006869.1| Sulfolobus solfataricus P2 section 228 of 272 of ... 40 8.1
40emb|CT010519.5| Mouse DNA sequence from clone RP23-305D10 on chr... 40 8.1
41emb|BX088548.10| Zebrafish DNA sequence from clone CH211-188E4, ... 40 8.1
42emb|CR759954.9| Human DNA sequence from clone DAAP-101P24 on chr... 40 8.1
43emb|CR339047.8| Zebrafish DNA sequence from clone CH211-12K8 in ... 40 8.1
44emb|CR936876.2| Human DNA sequence from clone DAMC-279M23 on chr... 40 8.1
45gb|AC122798.3| Mus musculus BAC clone RP23-301A3 from 2, complet... 40 8.1
46emb|CR931814.13| Zebrafish DNA sequence from clone DKEY-236E8 in... 40 8.1
47emb|Z95114.19|HS212A2 Human DNA sequence from clone CTA-212A2 on... 40 8.1
48gb|BC038352.1| Homo sapiens cDNA clone IMAGE:4775997, containing... 40 8.1
49emb|Z92545.1|HS50A13 Human DNA sequence from clone RP1-50A13 on ... 40 8.1
50emb|Z84474.1|HS111M5 Human DNA sequence from clone RP1-111M5 on ... 40 8.1
51emb|BX119924.8| Human DNA sequence from clone DASS-46L4 on chrom... 40 8.1
52emb|AL844539.5| Human DNA sequence from clone DAQB-239N17 on chr... 40 8.1
53emb|AL662871.9| Human DNA sequence from clone XXbac-322C17 on ch... 40 8.1
54emb|AL662859.5| Human DNA sequence from clone XXbac-196D17 on ch... 40 8.1
55emb|AL512603.26| Human DNA sequence from clone RP11-426A21 on ch... 40 8.1
56emb|AL358873.25| Human DNA sequence from clone RP11-219A3 on chr... 40 8.1
57emb|AL356794.10| Human DNA sequence from clone RP11-551A11 on ch... 40 8.1
58emb|AL353621.19| Human DNA sequence from clone RP11-490D19 on ch... 40 8.1
59emb|AL353692.14| Human DNA sequence from clone RP11-63K6 on chro... 40 8.1
60emb|AL139041.17| Human DNA sequence from clone RP11-408O19 on ch... 40 8.1
61emb|AL139123.15| Human DNA sequence from clone RP11-500G10 on ch... 40 8.1
62emb|AL079342.17|HSDJ72A23 Human DNA sequence from clone RP1-72A2... 40 8.1
63emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 i... 40 8.1
64emb|CR759942.12| Human DNA sequence from clone DAAP-182E11 on ch... 40 8.1
65gb|BC042918.1| Homo sapiens apolipoprotein L, 3, transcript vari... 40 8.1
66gb|AC114877.2| Homo sapiens chromosome 3 clone CTD-2270K17, comp... 40 8.1
67gb|AF159227.7| Homo sapiens chromosome 8 clone GS1-225N9 map 8q2... 40 8.1
68gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence 40 8.1
69gb|AC114781.2| Homo sapiens BAC clone RP11-576N17 from 4, comple... 40 8.1
70gb|AC010157.12| Homo sapiens chromosome 10 clone RP11-202D18, co... 40 8.1
71gb|AC103922.2| Homo sapiens chromosome 3 clone RP11-226E22, comp... 40 8.1
72gb|AC010441.6| Homo sapiens chromosome 5 clone CTD-2228J3, compl... 40 8.1
73gb|AC008643.6| Homo sapiens chromosome 5 clone CTB-180E20, compl... 40 8.1
74gb|AC160634.2| Mus musculus BAC clone RP23-429J21 from chromosom... 40 8.1
75gb|AF305227.1|AF305227 Homo sapiens apolipoprotein L3 mRNA, comp... 40 8.1
76gb|AY014907.1| Homo sapiens apolipoprotein L-III splice variant ... 40 8.1
77gb|AY014906.1| Homo sapiens apolipoprotein L-III splice variant ... 40 8.1
78gb|AY014905.1| Homo sapiens apolipoprotein L-III splice variant ... 40 8.1
79gb|AY014904.1| Homo sapiens apolipoprotein L-III splice variant ... 40 8.1
80gb|AY014903.1| Homo sapiens apolipoprotein L-III splice variant ... 40 8.1
81gb|AY014902.1| Homo sapiens apolipoprotein L-III splice variant ... 40 8.1
82gb|AF324238.1|AF324231S6 Homo sapiens apolipoprotein L-III (APOL... 40 8.1
83dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
84emb|BX908720.10| Human DNA sequence from clone DAMA-184I15 on ch... 40 8.1
85gb|AC108201.2| Homo sapiens BAC clone RP11-18M21 from 4, complet... 40 8.1
86gb|AC010883.8| Homo sapiens BAC clone RP11-339H12 from 2, comple... 40 8.1
87gb|AC084031.5| Homo sapiens BAC clone RP11-415N16 from 2, comple... 40 8.1
88gb|AC084558.1|CBRG35I24 Caenorhabditis briggsae cosmid G35I24, c... 40 8.1
89gb|AC026956.20| Homo sapiens chromosome 15, clone RP11-597K23, c... 40 8.1
90gb|AC103764.7| Homo sapiens chromosome 8, clone RP11-1057B8, com... 40 8.1
91gb|AC138070.3| Homo sapiens chromosome 3 clone RP11-263E3, compl... 40 8.1
92dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
93emb|BX001023.12| Zebrafish DNA sequence from clone CH211-233F10 ... 40 8.1
94dbj|AK025349.1| Homo sapiens cDNA: FLJ21696 fis, clone COL09689,... 40 8.1
95gb|AY279379.1| Melaleuca alternifolia putative monoterpene synth... 40 8.1
96gb|BC050596.1| Homo sapiens apolipoprotein L, 3, transcript vari... 40 8.1
97emb|BX248099.5| Zebrafish DNA sequence from clone DKEY-147I20 in... 40 8.1
98gb|AF070675.1|AF070675 Homo sapiens TNF-inducible protein CG12-1... 40 8.1
99dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.1
100dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
101emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chr... 40 8.1
102emb|AL928607.8| Mouse DNA sequence from clone RP23-326J18 on chr... 40 8.1
103gb|AC171970.3| Mus musculus BAC RP23-116G8 (Roswell Park Cancer... 40 8.1
104dbj|AB012922.1| Homo sapiens MTA1-L1 gene, complete cds 40 8.1 
>ref|NM_196996.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBb0044B19.3), mRNA
          Length = 1527

 Score =  109 bits (55), Expect = 1e-20
 Identities = 207/255 (81%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                        
Query: 344  cattgtcaaaatgctgcccatccggcaccggtgctttttgtttgtcctagctcagccgat 403
            |||||||||||||||||||| || ||||| ||||||||||||||  |   ||| | ||||
Sbjct: 1083 cattgtcaaaatgctgcccaaccagcacctgtgctttttgtttgcgccgactctgtcgat 1024

                                                                        
Query: 404  gagggcaggcttcgctctatagcagaaatatctgaaaaggggtcgatgtttttcttggta 463
            || || ||| || |||  |||||||||| ||||||||||| |||| | ||| ||||||  
Sbjct: 1023 gacggtaggttttgcttcatagcagaaagatctgaaaaggcgtcgctatttctcttggcg 964

                                                                        
Query: 464  ggttcttttg-agctcctggttccagcgttgtgtccagaattcattcttgcagatgcaga 522
            |||||||||| ||| |||| ||||||| ||    ||||||||||| ||||| |  |||| 
Sbjct: 963  ggttcttttggagc-cctgattccagcattagagccagaattcatccttgcggcagcagg 905

                                                                        
Query: 523  gtcgttaggtggaggtgggagcggagaccgaagcttcccggttgcacctggcggtggtgc 582
            ||| || ||||||||||| || ||||| ||||||||||| | || ||| || || || ||
Sbjct: 904  gtcatttggtggaggtggaagaggagatcgaagcttcccagctgaacccggtggcggcgc 845

                           
Query: 583  aaggagcatgcttgc 597
            |||||||||||||||
Sbjct: 844  aaggagcatgcttgc 830



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   gaggtcagtatgattcttgt 54
            ||||||||||||||||||||
Sbjct: 1389 gaggtcagtatgattcttgt 1370
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>dbj|AK100161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020P10, full
           insert sequence
          Length = 1045

 Score =  109 bits (55), Expect = 1e-20
 Identities = 207/255 (81%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                       
Query: 344 cattgtcaaaatgctgcccatccggcaccggtgctttttgtttgtcctagctcagccgat 403
           |||||||||||||||||||| || ||||| ||||||||||||||  |   ||| | ||||
Sbjct: 662 cattgtcaaaatgctgcccaaccagcacctgtgctttttgtttgcgccgactctgtcgat 603

                                                                       
Query: 404 gagggcaggcttcgctctatagcagaaatatctgaaaaggggtcgatgtttttcttggta 463
           || || ||| || |||  |||||||||| ||||||||||| |||| | ||| ||||||  
Sbjct: 602 gacggtaggttttgcttcatagcagaaagatctgaaaaggcgtcgctatttctcttggcg 543

                                                                       
Query: 464 ggttcttttg-agctcctggttccagcgttgtgtccagaattcattcttgcagatgcaga 522
           |||||||||| ||| |||| ||||||| ||    ||||||||||| ||||| |  |||| 
Sbjct: 542 ggttcttttggagc-cctgattccagcattagagccagaattcatccttgcggcagcagg 484

                                                                       
Query: 523 gtcgttaggtggaggtgggagcggagaccgaagcttcccggttgcacctggcggtggtgc 582
           ||| || ||||||||||| || ||||| ||||||||||| | || ||| || || || ||
Sbjct: 483 gtcatttggtggaggtggaagaggagatcgaagcttcccagctgaacccggtggcggcgc 424

                          
Query: 583 aaggagcatgcttgc 597
           |||||||||||||||
Sbjct: 423 aaggagcatgcttgc 409



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  gaggtcagtatgattcttgt 54
           ||||||||||||||||||||
Sbjct: 968 gaggtcagtatgattcttgt 949
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>dbj|AK065629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028C23, full
            insert sequence
          Length = 1550

 Score =  109 bits (55), Expect = 1e-20
 Identities = 207/255 (81%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                        
Query: 344  cattgtcaaaatgctgcccatccggcaccggtgctttttgtttgtcctagctcagccgat 403
            |||||||||||||||||||| || ||||| ||||||||||||||  |   ||| | ||||
Sbjct: 1111 cattgtcaaaatgctgcccaaccagcacctgtgctttttgtttgcgccgactctgtcgat 1052

                                                                        
Query: 404  gagggcaggcttcgctctatagcagaaatatctgaaaaggggtcgatgtttttcttggta 463
            || || ||| || |||  |||||||||| ||||||||||| |||| | ||| ||||||  
Sbjct: 1051 gacggtaggttttgcttcatagcagaaagatctgaaaaggcgtcgctatttctcttggcg 992

                                                                        
Query: 464  ggttcttttg-agctcctggttccagcgttgtgtccagaattcattcttgcagatgcaga 522
            |||||||||| ||| |||| ||||||| ||    ||||||||||| ||||| |  |||| 
Sbjct: 991  ggttcttttggagc-cctgattccagcattagagccagaattcatccttgcggcagcagg 933

                                                                        
Query: 523  gtcgttaggtggaggtgggagcggagaccgaagcttcccggttgcacctggcggtggtgc 582
            ||| || ||||||||||| || ||||| ||||||||||| | || ||| || || || ||
Sbjct: 932  gtcatttggtggaggtggaagaggagatcgaagcttcccagctgaacccggtggcggcgc 873

                           
Query: 583  aaggagcatgcttgc 597
            |||||||||||||||
Sbjct: 872  aaggagcatgcttgc 858



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   gaggtcagtatgattcttgt 54
            ||||||||||||||||||||
Sbjct: 1417 gaggtcagtatgattcttgt 1398
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>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete
              sequence
          Length = 163279

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 145/177 (81%), Gaps = 2/177 (1%)
 Strand = Plus / Plus

                                                                          
Query: 422    atagcagaaatatctgaaaaggggtcgatgtttttcttggtaggttcttttg-agctcct 480
              |||||||||| ||||||||||| |||| | ||| ||||||  |||||||||| ||| |||
Sbjct: 158660 atagcagaaagatctgaaaaggcgtcgctatttctcttggcgggttcttttggagc-cct 158718

                                                                          
Query: 481    ggttccagcgttgtgtccagaattcattcttgcagatgcagagtcgttaggtggaggtgg 540
              | ||||||| ||    ||||||||||| ||||| |  |||| ||| || |||||||||||
Sbjct: 158719 gattccagcattagagccagaattcatccttgcggcagcagggtcatttggtggaggtgg 158778

                                                                       
Query: 541    gagcggagaccgaagcttcccggttgcacctggcggtggtgcaaggagcatgcttgc 597
               || ||||| ||||||||||| | || ||| || || || |||||||||||||||||
Sbjct: 158779 aagaggagatcgaagcttcccagctgaacccggtggcggcgcaaggagcatgcttgc 158835



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 344    cattgtcaaaatgctgcccatccggcaccggtgctttttgtttg 387
              |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 158135 cattgtcaaaatgctgcccaaccagcacctgtgctttttgtttg 158178



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     gaggtcagtatgattcttgt 54
              ||||||||||||||||||||
Sbjct: 157829 gaggtcagtatgattcttgt 157848
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>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete
             sequence
          Length = 81784

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 145/177 (81%), Gaps = 2/177 (1%)
 Strand = Plus / Plus

                                                                         
Query: 422   atagcagaaatatctgaaaaggggtcgatgtttttcttggtaggttcttttg-agctcct 480
             |||||||||| ||||||||||| |||| | ||| ||||||  |||||||||| ||| |||
Sbjct: 33981 atagcagaaagatctgaaaaggcgtcgctatttctcttggcgggttcttttggagc-cct 34039

                                                                         
Query: 481   ggttccagcgttgtgtccagaattcattcttgcagatgcagagtcgttaggtggaggtgg 540
             | ||||||| ||    ||||||||||| ||||| |  |||| ||| || |||||||||||
Sbjct: 34040 gattccagcattagagccagaattcatccttgcggcagcagggtcatttggtggaggtgg 34099

                                                                      
Query: 541   gagcggagaccgaagcttcccggttgcacctggcggtggtgcaaggagcatgcttgc 597
              || ||||| ||||||||||| | || ||| || || || |||||||||||||||||
Sbjct: 34100 aagaggagatcgaagcttcccagctgaacccggtggcggcgcaaggagcatgcttgc 34156



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 344   cattgtcaaaatgctgcccatccggcaccggtgctttttgtttg 387
             |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 33456 cattgtcaaaatgctgcccaaccagcacctgtgctttttgtttg 33499



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    gaggtcagtatgattcttgt 54
             ||||||||||||||||||||
Sbjct: 33150 gaggtcagtatgattcttgt 33169
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 145/177 (81%), Gaps = 2/177 (1%)
 Strand = Plus / Minus

                                                                            
Query: 422      atagcagaaatatctgaaaaggggtcgatgtttttcttggtaggttcttttg-agctcct 480
                |||||||||| ||||||||||| |||| | ||| ||||||  |||||||||| ||| |||
Sbjct: 17213619 atagcagaaagatctgaaaaggcgtcgctatttctcttggcgggttcttttggagc-cct 17213561

                                                                            
Query: 481      ggttccagcgttgtgtccagaattcattcttgcagatgcagagtcgttaggtggaggtgg 540
                | ||||||| ||    ||||||||||| ||||| |  |||| ||| || |||||||||||
Sbjct: 17213560 gattccagcattagagccagaattcatccttgcggcagcagggtcatttggtggaggtgg 17213501

                                                                         
Query: 541      gagcggagaccgaagcttcccggttgcacctggcggtggtgcaaggagcatgcttgc 597
                 || ||||| ||||||||||| | || ||| || || || |||||||||||||||||
Sbjct: 17213500 aagaggagatcgaagcttcccagctgaacccggtggcggcgcaaggagcatgcttgc 17213444



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 344      cattgtcaaaatgctgcccatccggcaccggtgctttttgtttg 387
                |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 17214144 cattgtcaaaatgctgcccaaccagcacctgtgctttttgtttg 17214101



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 35       gaggtcagtatgattcttgt 54
                ||||||||||||||||||||
Sbjct: 17214450 gaggtcagtatgattcttgt 17214431
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 145/177 (81%), Gaps = 2/177 (1%)
 Strand = Plus / Minus

                                                                            
Query: 422      atagcagaaatatctgaaaaggggtcgatgtttttcttggtaggttcttttg-agctcct 480
                |||||||||| ||||||||||| |||| | ||| ||||||  |||||||||| ||| |||
Sbjct: 17222659 atagcagaaagatctgaaaaggcgtcgctatttctcttggcgggttcttttggagc-cct 17222601

                                                                            
Query: 481      ggttccagcgttgtgtccagaattcattcttgcagatgcagagtcgttaggtggaggtgg 540
                | ||||||| ||    ||||||||||| ||||| |  |||| ||| || |||||||||||
Sbjct: 17222600 gattccagcattagagccagaattcatccttgcggcagcagggtcatttggtggaggtgg 17222541

                                                                         
Query: 541      gagcggagaccgaagcttcccggttgcacctggcggtggtgcaaggagcatgcttgc 597
                 || ||||| ||||||||||| | || ||| || || || |||||||||||||||||
Sbjct: 17222540 aagaggagatcgaagcttcccagctgaacccggtggcggcgcaaggagcatgcttgc 17222484



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 344      cattgtcaaaatgctgcccatccggcaccggtgctttttgtttg 387
                |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 17223184 cattgtcaaaatgctgcccaaccagcacctgtgctttttgtttg 17223141



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 35       gaggtcagtatgattcttgt 54
                ||||||||||||||||||||
Sbjct: 17223490 gaggtcagtatgattcttgt 17223471
to top
>dbj|AP000894.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-672L10, complete
             sequence
          Length = 170522

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 106   actcctattcaggaaaatattcag 129
             ||||||||||||||||||||||||
Sbjct: 25572 actcctattcaggaaaatattcag 25595
to top
>gb|AC102296.6| Mus musculus chromosome 3, clone RP24-389G6, complete sequence
          Length = 184243

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 457   cttggtaggttcttttgagctc 478
             ||||||||||||||||||||||
Sbjct: 65329 cttggtaggttcttttgagctc 65308
to top
>gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, complete sequence
          Length = 198281

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 457    cttggtaggttcttttgagctc 478
              ||||||||||||||||||||||
Sbjct: 165141 cttggtaggttcttttgagctc 165120
to top
>emb|AL583830.7| Human DNA sequence from clone RP11-172L10 on chromosome 1 Contains the
             5' end of a variant of the KCNK2 gene for potassium
             channel subfamily K member 2 and a translocase of inner
             mitochondrial membrane 17 homolog A (yeast) (TIMM17A)
             pseudogene, complete sequence
          Length = 151469

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 120   aaatattcagacttttggagct 141
             ||||||||||||||||||||||
Sbjct: 74708 aaatattcagacttttggagct 74729
to top
>gb|AC099563.3| Homo sapiens chromosome 1 clone RP11-323K10, complete sequence
          Length = 91282

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 120   aaatattcagacttttggagct 141
             ||||||||||||||||||||||
Sbjct: 78597 aaatattcagacttttggagct 78576
to top
>gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, complete sequence
          Length = 199727

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 419   tctatagcagaaatatctgaa 439
             |||||||||||||||||||||
Sbjct: 51406 tctatagcagaaatatctgaa 51386
to top
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 227955

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 401    gatgagggcaggcttcgctct 421
              |||||||||||||||||||||
Sbjct: 164516 gatgagggcaggcttcgctct 164536
to top
>ref|XM_610033.2| PREDICTED: Bos taurus similar to Solute carrier family 13 member 4
            (Na(+)/sulfate cotransporter SUT-1), transcript variant 1
            (LOC531535), mRNA
          Length = 2484

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 466  ttcttttgagctcctggttcc 486
            |||||||||||||||||||||
Sbjct: 1366 ttcttttgagctcctggttcc 1346
to top
>gb|AC005999.2| Homo sapiens PAC clone RP4-718N17 from 7, complete sequence
          Length = 135727

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   ttttggagctccttgaatcca 152
             |||||||||||||||||||||
Sbjct: 94555 ttttggagctccttgaatcca 94535
to top
>gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, complete sequence
          Length = 170074

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 301    cggttttcgttgtctttttta 321
              |||||||||||||||||||||
Sbjct: 147243 cggttttcgttgtctttttta 147223
to top
>emb|AL832670.1|HSM803980 Homo sapiens mRNA; cDNA DKFZp313N0812 (from clone DKFZp313N0812)
          Length = 3175

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 449  atgtttttcttggtaggttct 469
            |||||||||||||||||||||
Sbjct: 1408 atgtttttcttggtaggttct 1428
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 366     cggcaccggtgctttttgttt 386
               |||||||||||||||||||||
Sbjct: 3396438 cggcaccggtgctttttgttt 3396418
to top
>gb|AC083829.5| Homo sapiens BAC clone RP11-466G12 from 4, complete sequence
          Length = 189402

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   atgtttttcttggtaggttct 469
             |||||||||||||||||||||
Sbjct: 45142 atgtttttcttggtaggttct 45162
to top
>gb|AC084421.4| Homo sapiens BAC clone RP11-420C12 from 4, complete sequence
          Length = 93974

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   aggaaaatattcagacttttg 136
             |||||||||||||||||||||
Sbjct: 36019 aggaaaatattcagacttttg 35999
to top
>dbj|AK034696.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430025L15 product:sushi-repeat-containing protein,
            full insert sequence
          Length = 2458

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 427  agaaatatctgaaaaggggtc 447
            |||||||||||||||||||||
Sbjct: 2388 agaaatatctgaaaaggggtc 2368
to top
>emb|BX005236.16| Mouse DNA sequence from clone RP23-254A23 on chromosome X, complete
             sequence
          Length = 122633

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 427   agaaatatctgaaaaggggtc 447
             |||||||||||||||||||||
Sbjct: 21192 agaaatatctgaaaaggggtc 21212
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 452     tttttcttggtaggttcttttgagctcct 480
               |||||| |||||||||||| |||||||||
Sbjct: 4224770 tttttcatggtaggttcttatgagctcct 4224742
to top
>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0523B07
          Length = 170510

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 452   tttttcttggtaggttcttttgagctcct 480
             |||||| |||||||||||| |||||||||
Sbjct: 48529 tttttcatggtaggttcttatgagctcct 48501
to top
>gb|AY111142.1| Zea mays CL9565_1 mRNA sequence
          Length = 737

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 494 tgtccagaattcattcttgcagatgcagagtcg 526
           |||||||||||||| ||||||| ||||| ||||
Sbjct: 514 tgtccagaattcatccttgcagctgcagggtcg 546
to top
>gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 map 4p16, complete sequence
          Length = 191904

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 424    agcagaaatatctgaaaaggg 444
              |||||||||||||||||||||
Sbjct: 168443 agcagaaatatctgaaaaggg 168423
to top
>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence
          Length = 174902

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 419   tctatagcagaaatatctgaa 439
             |||||||||||||||||||||
Sbjct: 72329 tctatagcagaaatatctgaa 72349
to top
>ref|NM_016911.2| Mus musculus sushi-repeat-containing protein (Srpx), mRNA
          Length = 2458

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 427  agaaatatctgaaaaggggtc 447
            |||||||||||||||||||||
Sbjct: 2388 agaaatatctgaaaaggggtc 2368
to top
>gb|AC153985.4| Mus musculus 6 BAC RP24-507D15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 148264

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gaaaatattcagacttttgg 137
             ||||||||||||||||||||
Sbjct: 93513 gaaaatattcagacttttgg 93494
to top
>gb|AC169503.1| Mus musculus BAC clone RP24-281B5 from chromosome 12, complete sequence
          Length = 163008

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   caagtaccaagtggatgcagatca 227
             |||| |||||||||||||||||||
Sbjct: 19975 caagcaccaagtggatgcagatca 19952
to top
>ref|NM_145640.1| Homo sapiens apolipoprotein L, 3 (APOL3), transcript variant alpha/d,
            mRNA
          Length = 2118

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1978 tgtttttcttggtaggttct 1959
to top
>ref|NM_145639.1| Homo sapiens apolipoprotein L, 3 (APOL3), transcript variant alpha/c,
            mRNA
          Length = 2215

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 2075 tgtttttcttggtaggttct 2056
to top
>ref|NM_145642.1| Homo sapiens apolipoprotein L, 3 (APOL3), transcript variant beta/b,
            mRNA
          Length = 3564

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 3424 tgtttttcttggtaggttct 3405
to top
>ref|NM_145641.1| Homo sapiens apolipoprotein L, 3 (APOL3), transcript variant beta/a,
            mRNA
          Length = 3627

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 3487 tgtttttcttggtaggttct 3468
to top
>ref|NM_014349.2| Homo sapiens apolipoprotein L, 3 (APOL3), transcript variant alpha/a,
            mRNA
          Length = 2444

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 2304 tgtttttcttggtaggttct 2285
to top
>ref|NM_030644.1| Homo sapiens apolipoprotein L, 3 (APOL3), transcript variant alpha/b,
            mRNA
          Length = 2328

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 2188 tgtttttcttggtaggttct 2169
to top
>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence
          Length = 254081

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    tttttcaagtaccaagtgga 218
              ||||||||||||||||||||
Sbjct: 122975 tttttcaagtaccaagtgga 122956
to top
>gb|AE006869.1| Sulfolobus solfataricus P2 section 228 of 272 of the complete genome
          Length = 11765

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   tgtgtactttttcagtcaca 300
             ||||||||||||||||||||
Sbjct: 10626 tgtgtactttttcagtcaca 10607
to top
>emb|CT010519.5| Mouse DNA sequence from clone RP23-305D10 on chromosome 14, complete
              sequence
          Length = 224463

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    aaatgtttatttttcaagta 209
              ||||||||||||||||||||
Sbjct: 126504 aaatgtttatttttcaagta 126523
to top
>emb|BX088548.10| Zebrafish DNA sequence from clone CH211-188E4, complete sequence
          Length = 152713

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 326 acacaacagatgtccttcca 345
           ||||||||||||||||||||
Sbjct: 625 acacaacagatgtccttcca 644
to top
>emb|CR759954.9| Human DNA sequence from clone DAAP-101P24 on chromosome 6, complete
             sequence
          Length = 94061

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 93351 tgtttttcttggtaggttct 93370
to top
>emb|CR339047.8| Zebrafish DNA sequence from clone CH211-12K8 in linkage group 11,
             complete sequence
          Length = 137403

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   acacaacagatgtccttcca 345
             ||||||||||||||||||||
Sbjct: 56446 acacaacagatgtccttcca 56427
to top
>emb|CR936876.2| Human DNA sequence from clone DAMC-279M23 on chromosome 6, complete
            sequence
          Length = 41386

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1634 tgtttttcttggtaggttct 1653
to top
>gb|AC122798.3| Mus musculus BAC clone RP23-301A3 from 2, complete sequence
          Length = 206324

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   tagaaattctgtgtactttt 291
             ||||||||||||||||||||
Sbjct: 39201 tagaaattctgtgtactttt 39182
to top
>emb|CR931814.13| Zebrafish DNA sequence from clone DKEY-236E8 in linkage group 5,
             complete sequence
          Length = 155089

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   acacaacagatgtccttcca 345
             ||||||||||||||||||||
Sbjct: 86586 acacaacagatgtccttcca 86605
to top
>emb|Z95114.19|HS212A2 Human DNA sequence from clone CTA-212A2 on chromosome 22q12, complete
              sequence
          Length = 212753

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    tgtttttcttggtaggttct 469
              ||||||||||||||||||||
Sbjct: 124978 tgtttttcttggtaggttct 124997
to top
>gb|BC038352.1| Homo sapiens cDNA clone IMAGE:4775997, containing frame-shift errors
          Length = 2101

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1882 tgtttttcttggtaggttct 1863
to top
>emb|Z92545.1|HS50A13 Human DNA sequence from clone RP1-50A13 on chromosome Xp11-21 Contains
             a pseudogene similar to part of ribosomal protein S4,
             X-linked (RPS4X) and an ATP synthase, H+ transporting,
             mitochondrial F0 complex, subunit c (subunit 9), isoform 1
             (ATP5G1) pseudogene, complete sequence
          Length = 131735

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 49285 tgtttttcttggtaggttct 49304
to top
>emb|Z84474.1|HS111M5 Human DNA sequence from clone RP1-111M5 on chromosome 6p21.3 Contains
             an RPL13 (60S Ribosomal protein L13, BBC1) pseudogene, a
             zinc finger protein pseudogene, the 3' end of the RFP gene
             for ret finger protein, four CpG islands, ESTs, STSs and
             GSSs, complete sequence
          Length = 107526

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 60639 tgtttttcttggtaggttct 60658
to top
>emb|BX119924.8| Human DNA sequence from clone DASS-46L4 on chromosome 6, complete
             sequence
          Length = 92058

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 37030 tgtttttcttggtaggttct 37049
to top
>emb|AL844539.5| Human DNA sequence from clone DAQB-239N17 on chromosome 6 Contains the
             NOL5BP pseudogene for nucleolar protein 5B, the RPL13P
             pseudogene for ribosomal protein L13 and 3 CpG islands,
             complete sequence
          Length = 98145

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 93622 tgtttttcttggtaggttct 93641
to top
>emb|AL662871.9| Human DNA sequence from clone XXbac-322C17 on chromosome 6 contains
            the RFP gene for ret finger protein gene, a zinc finger
            protein pseudogene, a novel protein and three CpG
            islands, complete sequence
          Length = 103158

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 4387 tgtttttcttggtaggttct 4406
to top
>emb|AL662859.5| Human DNA sequence from clone XXbac-196D17 on chromosome 6 contains a
            zinc finger protein pseudogene, the RFP gene for ret
            finger protein and three CpG islands, complete sequence
          Length = 61233

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 2393 tgtttttcttggtaggttct 2412
to top
>emb|AL512603.26| Human DNA sequence from clone RP11-426A21 on chromosome 10 Contains the
             gene for a novel OTU-like cysteine protease domain
             containing protein (LOC220213) and a CpG island, complete
             sequence
          Length = 182917

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 85099 tgtttttcttggtaggttct 85080
to top
>emb|AL358873.25| Human DNA sequence from clone RP11-219A3 on chromosome 6, complete
             sequence
          Length = 93029

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 42206 tgtttttcttggtaggttct 42225
to top
>emb|AL356794.10| Human DNA sequence from clone RP11-551A11 on chromosome 6 Contains a
              ribosomal protein S3A (40S ribosomal protein S3a, v-fos
              transformation effector protein 1) (RPS3A)(FTE1)
              pseudogene, complete sequence
          Length = 164439

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    tattcaggaaaatattcaga 130
              ||||||||||||||||||||
Sbjct: 117593 tattcaggaaaatattcaga 117612
to top
>emb|AL353621.19| Human DNA sequence from clone RP11-490D19 on chromosome 9 Contains a
             novel pseudogene, the MRPL50 gene for mitochondrial
             ribosomal protein L50, the ZNF189 gene for zinc finger
             protein 189, the ALDOB gene for aldolase B,
             fructose-bisphosphate, a NADH dehydrogenase (ubiquinone) 1
             alpha subcomplex (NDUFA4) pseudogene, three novel genes,
             the 5' end of the RNF20 gene for ring finger protein 20
             and three CpG islands, complete sequence
          Length = 164115

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 78142 tgtttttcttggtaggttct 78123
to top
>emb|AL353692.14| Human DNA sequence from clone RP11-63K6 on chromosome 6 Contains a
             novel pseudogene, the 5' end of the MDN1 gene for midasin
             homolog (yeast), the CASP8AP2 gene for CASP8 associated
             protein 2, a ribosomal protein L22 (RPL22) pseudogene, a
             novel pseudogene similar to G protein pathway suppressor 1
             (GPS1), the gene for connexin 62 (CX62), a novel gene, the
             3' part of the BACH2 gene for BTB and CNC homology 1 basic
             leucine zipper transcription factor 2 and four CpG
             islands, complete sequence
          Length = 137184

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 38829 tgtttttcttggtaggttct 38848
to top
>emb|AL139041.17| Human DNA sequence from clone RP11-408O19 on chromosome 9p11.2-21
              Contains the 3' end of the gene for a novel protein similar
              to sorting nexin 7 (SNX7), the TSCOT gene for thymic
              stromal co-transporter, a pseudogene similar to Mus
              musculus major urinary proteins and a CpG island, complete
              sequence
          Length = 141659

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    tgtttttcttggtaggttct 469
              ||||||||||||||||||||
Sbjct: 101121 tgtttttcttggtaggttct 101140
to top
>emb|AL139123.15| Human DNA sequence from clone RP11-500G10 on chromosome 10 Contains three
              novel genes, a peptidylprolyl isomerase A (cyclophilin A)
              (PPIA) pseudogene, a meningioma expressed antigen 6 (MGEA6)
              pseudogene, a novel protein similar thioredoxin-like 2
              (TXNL2) and four CpG islands, complete sequence
          Length = 209527

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    tgtttttcttggtaggttct 469
              ||||||||||||||||||||
Sbjct: 196361 tgtttttcttggtaggttct 196342
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>emb|AL079342.17|HSDJ72A23 Human DNA sequence from clone RP1-72A23 on chromosome 6 Contains an
             adaptor-related (clathrin-associated) protein complex 4,
             sigma 1 subunit (AP4A1) pseudogene, a novel pseudogene,
             the 5' end of the RNGTT gene for RNA guanylyltransferase
             and 5'-phosphatase (mRNA capping enzyme, CAP1A) and two
             CpG islands, complete sequence
          Length = 150541

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   ctccacaaatgtttattttt 203
             ||||||||||||||||||||
Sbjct: 83378 ctccacaaatgtttattttt 83359
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>emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 in linkage group 14,
             complete sequence
          Length = 110290

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   acacaacagatgtccttcca 345
             ||||||||||||||||||||
Sbjct: 20220 acacaacagatgtccttcca 20239
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>emb|CR759942.12| Human DNA sequence from clone DAAP-182E11 on chromosome 6, complete
            sequence
          Length = 69422

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1290 tgtttttcttggtaggttct 1309
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>gb|BC042918.1| Homo sapiens apolipoprotein L, 3, transcript variant alpha/c, mRNA
            (cDNA clone MGC:52206 IMAGE:5932779), complete cds
          Length = 2046

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1880 tgtttttcttggtaggttct 1861
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>gb|AC114877.2| Homo sapiens chromosome 3 clone CTD-2270K17, complete sequence
          Length = 179246

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tgtttatttttcaagtacca 212
              ||||||||||||||||||||
Sbjct: 150786 tgtttatttttcaagtacca 150805



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    tgtttatttttcaagtacca 212
              ||||||||||||||||||||
Sbjct: 150041 tgtttatttttcaagtacca 150022
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>gb|AF159227.7| Homo sapiens chromosome 8 clone GS1-225N9 map 8q24.2, complete
            sequence
          Length = 109219

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ccacaaatgtttatttttca 205
            ||||||||||||||||||||
Sbjct: 7910 ccacaaatgtttatttttca 7891
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>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence
          Length = 191684

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   tgtttttcttggtaggttct 469
             ||||||||||||||||||||
Sbjct: 61824 tgtttttcttggtaggttct 61805
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>gb|AC114781.2| Homo sapiens BAC clone RP11-576N17 from 4, complete sequence
          Length = 149188

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    tgtttttcttggtaggttct 469
              ||||||||||||||||||||
Sbjct: 137644 tgtttttcttggtaggttct 137663
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>gb|AC010157.12| Homo sapiens chromosome 10 clone RP11-202D18, complete sequence
          Length = 160310

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  tgtccttccattgtcaaaat 355
            ||||||||||||||||||||
Sbjct: 9074 tgtccttccattgtcaaaat 9093
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>gb|AC103922.2| Homo sapiens chromosome 3 clone RP11-226E22, complete sequence
          Length = 164479

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tgtttatttttcaagtacca 212
              ||||||||||||||||||||
Sbjct: 129723 tgtttatttttcaagtacca 129742



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    tgtttatttttcaagtacca 212
              ||||||||||||||||||||
Sbjct: 128978 tgtttatttttcaagtacca 128959
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>gb|AC010441.6| Homo sapiens chromosome 5 clone CTD-2228J3, complete sequence
          Length = 157076

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    ttaggtggaggtgggagcgg 546
              ||||||||||||||||||||
Sbjct: 131334 ttaggtggaggtgggagcgg 131315
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>gb|AC008643.6| Homo sapiens chromosome 5 clone CTB-180E20, complete sequence
          Length = 103788

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   ttaggtggaggtgggagcgg 546
             ||||||||||||||||||||
Sbjct: 58805 ttaggtggaggtgggagcgg 58786
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>gb|AC160634.2| Mus musculus BAC clone RP23-429J21 from chromosome 12, complete sequence
          Length = 176160

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 204    caagtaccaagtggatgcagatca 227
              |||| |||||||||||||||||||
Sbjct: 157194 caagcaccaagtggatgcagatca 157171
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>gb|AF305227.1|AF305227 Homo sapiens apolipoprotein L3 mRNA, complete cds
          Length = 2085

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1932 tgtttttcttggtaggttct 1913
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>gb|AY014907.1| Homo sapiens apolipoprotein L-III splice variant beta/b (APOLIII)
            mRNA, complete cds
          Length = 3563

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 3424 tgtttttcttggtaggttct 3405
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>gb|AY014906.1| Homo sapiens apolipoprotein L-III splice variant beta/a (APOLIII)
            mRNA, complete cds
          Length = 3626

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 3487 tgtttttcttggtaggttct 3468
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>gb|AY014905.1| Homo sapiens apolipoprotein L-III splice variant alpha/a (APOLIII)
            mRNA, complete cds
          Length = 2443

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 2304 tgtttttcttggtaggttct 2285
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>gb|AY014904.1| Homo sapiens apolipoprotein L-III splice variant alpha/d (APOLIII)
            mRNA, complete cds
          Length = 2117

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1978 tgtttttcttggtaggttct 1959
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>gb|AY014903.1| Homo sapiens apolipoprotein L-III splice variant alpha/c (APOLIII)
            mRNA, complete cds
          Length = 2214

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 2075 tgtttttcttggtaggttct 2056
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>gb|AY014902.1| Homo sapiens apolipoprotein L-III splice variant alpha/b (APOLIII)
            mRNA, complete cds
          Length = 2327

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 2188 tgtttttcttggtaggttct 2169
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>gb|AF324238.1|AF324231S6 Homo sapiens apolipoprotein L-III (APOLIII) gene, exon 5 and complete
            cds, alternatively spliced
          Length = 1749

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1610 tgtttttcttggtaggttct 1591
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 379    ttttgtttgtcctagctcagccga 402
              |||||||||||||| |||||||||
Sbjct: 121602 ttttgtttgtcctacctcagccga 121579
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>emb|BX908720.10| Human DNA sequence from clone DAMA-184I15 on chromosome 6, complete
              sequence
          Length = 132528

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    tgtttttcttggtaggttct 469
              ||||||||||||||||||||
Sbjct: 126351 tgtttttcttggtaggttct 126370
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>gb|AC108201.2| Homo sapiens BAC clone RP11-18M21 from 4, complete sequence
          Length = 176099

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   atgcagatcatcatttttca 237
             ||||||||||||||||||||
Sbjct: 23281 atgcagatcatcatttttca 23300
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>gb|AC010883.8| Homo sapiens BAC clone RP11-339H12 from 2, complete sequence
          Length = 215532

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   aacatcacctccacaaatgt 195
             ||||||||||||||||||||
Sbjct: 40445 aacatcacctccacaaatgt 40464
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>gb|AC084031.5| Homo sapiens BAC clone RP11-415N16 from 2, complete sequence
          Length = 77850

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   ttgtcaaaatgctgcccatc 365
             ||||||||||||||||||||
Sbjct: 37503 ttgtcaaaatgctgcccatc 37484
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>gb|AC084558.1|CBRG35I24 Caenorhabditis briggsae cosmid G35I24, complete sequence
          Length = 24174

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  attctgtgtactttttcagt 296
            ||||||||||||||||||||
Sbjct: 7272 attctgtgtactttttcagt 7291
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>gb|AC026956.20| Homo sapiens chromosome 15, clone RP11-597K23, complete sequence
          Length = 215520

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 504    tcattcttgcagatgcagag 523
              ||||||||||||||||||||
Sbjct: 174637 tcattcttgcagatgcagag 174656
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>gb|AC103764.7| Homo sapiens chromosome 8, clone RP11-1057B8, complete sequence
          Length = 179860

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   ccacaaatgtttatttttca 205
             ||||||||||||||||||||
Sbjct: 36776 ccacaaatgtttatttttca 36795
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>gb|AC138070.3| Homo sapiens chromosome 3 clone RP11-263E3, complete sequence
          Length = 169834

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 193  tgtttatttttcaagtacca 212
            ||||||||||||||||||||
Sbjct: 4054 tgtttatttttcaagtacca 4073



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 193  tgtttatttttcaagtacca 212
            ||||||||||||||||||||
Sbjct: 3309 tgtttatttttcaagtacca 3290
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>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1460A05
          Length = 143371

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 379    ttttgtttgtcctagctcagccga 402
              |||||||||||||| |||||||||
Sbjct: 121602 ttttgtttgtcctacctcagccga 121579
to top
>emb|BX001023.12| Zebrafish DNA sequence from clone CH211-233F10 in linkage group 5,
             complete sequence
          Length = 168064

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   acacaacagatgtccttcca 345
             ||||||||||||||||||||
Sbjct: 45827 acacaacagatgtccttcca 45808
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>dbj|AK025349.1| Homo sapiens cDNA: FLJ21696 fis, clone COL09689, highly similar to
            AF070675 Homo sapiens TNF-inducible protein CG12-1 mRNA
          Length = 2124

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1901 tgtttttcttggtaggttct 1882
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>gb|AY279379.1| Melaleuca alternifolia putative monoterpene synthase mRNA, complete
            cds
          Length = 1925

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  tcctagctcagccgatgagg 407
            ||||||||||||||||||||
Sbjct: 1520 tcctagctcagccgatgagg 1501
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>gb|BC050596.1| Homo sapiens apolipoprotein L, 3, transcript variant alpha/c, mRNA
            (cDNA clone MGC:60037 IMAGE:6012757), complete cds
          Length = 2091

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 1935 tgtttttcttggtaggttct 1916
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>emb|BX248099.5| Zebrafish DNA sequence from clone DKEY-147I20 in linkage group 4,
             complete sequence
          Length = 72508

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   cagaattcattcttgcagat 517
             ||||||||||||||||||||
Sbjct: 63815 cagaattcattcttgcagat 63796
to top
>gb|AF070675.1|AF070675 Homo sapiens TNF-inducible protein CG12-1 mRNA, complete cds
          Length = 2298

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  tgtttttcttggtaggttct 469
            ||||||||||||||||||||
Sbjct: 2145 tgtttttcttggtaggttct 2126
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>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete
             sequence
          Length = 177433

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    tgagatctggcaaacacaaa 83
             ||||||||||||||||||||
Sbjct: 13727 tgagatctggcaaacacaaa 13746
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>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0681G01, complete sequence
          Length = 184118

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 379   ttttgtttgtcctagctcagccga 402
             |||||||||||||| |||||||||
Sbjct: 98940 ttttgtttgtcctacctcagccga 98963
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>emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chromosome 2, complete
            sequence
          Length = 153467

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  aacatcacctccacaaatgt 195
            ||||||||||||||||||||
Sbjct: 3448 aacatcacctccacaaatgt 3467
to top
>emb|AL928607.8| Mouse DNA sequence from clone RP23-326J18 on chromosome 2, complete
             sequence
          Length = 128293

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   tagaaattctgtgtactttt 291
             ||||||||||||||||||||
Sbjct: 40797 tagaaattctgtgtactttt 40816
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>gb|AC171970.3| Mus musculus  BAC RP23-116G8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 193415

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    gaaaatattcagacttttgg 137
              ||||||||||||||||||||
Sbjct: 103953 gaaaatattcagacttttgg 103934
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>dbj|AB012922.1| Homo sapiens MTA1-L1 gene, complete cds
          Length = 16790

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   tgagatctggcaaacacaaa 83
            ||||||||||||||||||||
Sbjct: 2222 tgagatctggcaaacacaaa 2203


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,924,699
Number of Sequences: 3902068
Number of extensions: 6924699
Number of successful extensions: 119438
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119052
Number of HSP's gapped (non-prelim): 377
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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