| Clone Name | rbags17h14 |
|---|---|
| Clone Library Name | barley_pub |
>PFD5_ARATH (P57742) Probable prefoldin subunit 5| Length = 151 Score = 176 bits (446), Expect = 6e-44 Identities = 84/118 (71%), Positives = 105/118 (88%) Frame = -3 Query: 696 DSLSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGY 517 DSL+ IRTA RL+ A AAL++LSLRPQGKK+LVPLTASLYVPGTLD+A+KVLVD+GTGY Sbjct: 34 DSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDIGTGY 93 Query: 516 YIEKTMTQGKEYCERKVNLLKSNFDELLEMATKKKSIADEMGMFLQAKLRQASPSSSS 343 +IEKTM GK+YC+RK+NLLKSNFD+L E+A KKKS+ADE GM LQAK++Q + +++S Sbjct: 94 FIEKTMDDGKDYCQRKINLLKSNFDQLFEVAAKKKSVADEAGMVLQAKVKQLTAATTS 151
>PFD5_PONPY (Q5RAY0) Prefoldin subunit 5| Length = 154 Score = 87.8 bits (216), Expect = 3e-17 Identities = 41/110 (37%), Positives = 69/110 (62%) Frame = -3 Query: 693 SLSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYY 514 S+++++ T+ A L+ L+ +GK+LLVPLT+S+YVPG L D E VL+DVGTGYY Sbjct: 32 SIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYY 91 Query: 513 IEKTMTQGKEYCERKVNLLKSNFDELLEMATKKKSIADEMGMFLQAKLRQ 364 +EKT K++ +RK++ L +++ +K ++ + + K+RQ Sbjct: 92 VEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIRQ 141
>PFD5_MOUSE (Q9WU28) Prefoldin subunit 5 (C-myc-binding protein Mm-1) (Myc| modulator 1) (EIG-1) Length = 154 Score = 86.3 bits (212), Expect = 8e-17 Identities = 40/110 (36%), Positives = 69/110 (62%) Frame = -3 Query: 693 SLSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYY 514 S+++++ T+ A L+ L+ +GK+LLVPLT+S+YVPG L D E VL+DVGTGYY Sbjct: 32 SIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYY 91 Query: 513 IEKTMTQGKEYCERKVNLLKSNFDELLEMATKKKSIADEMGMFLQAKLRQ 364 +EKT K++ +RK++ L +++ +K ++ + + K++Q Sbjct: 92 VEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQQ 141
>PFD5_HUMAN (Q99471) Prefoldin subunit 5 (C-myc-binding protein Mm-1) (Myc| modulator 1) Length = 154 Score = 86.3 bits (212), Expect = 8e-17 Identities = 40/110 (36%), Positives = 69/110 (62%) Frame = -3 Query: 693 SLSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYY 514 S+++++ T+ A L+ L+ +GK+LLVPLT+S+YVPG L D E VL+DVGTGYY Sbjct: 32 SIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYY 91 Query: 513 IEKTMTQGKEYCERKVNLLKSNFDELLEMATKKKSIADEMGMFLQAKLRQ 364 +EKT K++ +RK++ L +++ +K ++ + + K++Q Sbjct: 92 VEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQQ 141
>PFD5_BOVIN (Q8HYI9) Prefoldin subunit 5| Length = 154 Score = 86.3 bits (212), Expect = 8e-17 Identities = 40/110 (36%), Positives = 68/110 (61%) Frame = -3 Query: 693 SLSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYY 514 S+++++ T+ A L+ L +GK+LLVPLT+S+YVPG L D E VL+DVGTGYY Sbjct: 32 SIAQLKVVQTKYVEAKDCLNVLKKNNEGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYY 91 Query: 513 IEKTMTQGKEYCERKVNLLKSNFDELLEMATKKKSIADEMGMFLQAKLRQ 364 +EKT K++ +RK++ L +++ +K ++ + + K++Q Sbjct: 92 VEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQQ 141
>PFD5_DROME (Q9VCZ8) Probable prefoldin subunit 5| Length = 168 Score = 72.8 bits (177), Expect = 9e-13 Identities = 36/125 (28%), Positives = 71/125 (56%) Frame = -3 Query: 696 DSLSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGY 517 DSLS + + + AL + +++LVPLT+S+YVPG + D + ++D+GTGY Sbjct: 40 DSLSTLHGCQAKYAGSKEALGTFQPNWENRQILVPLTSSMYVPGRVKDLNRFVIDIGTGY 99 Query: 516 YIEKTMTQGKEYCERKVNLLKSNFDELLEMATKKKSIADEMGMFLQAKLRQASPSSSS*E 337 YIEK + K+Y +R+V ++ +++ ++ +K + + L+ ++QA+ + + Sbjct: 100 YIEKDLEGSKDYFKRRVEYVQEQIEKIEKIHLQKTRFYNSVMSVLE--MKQAAAAKLQSQ 157 Query: 336 QNAHP 322 Q + P Sbjct: 158 QQSQP 162
>PFD5_YEAST (Q04493) Prefoldin subunit 5| Length = 163 Score = 66.2 bits (160), Expect = 9e-11 Identities = 31/86 (36%), Positives = 57/86 (66%) Frame = -3 Query: 615 QGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIEKTMTQGKEYCERKVNLLKSNFDEL 436 +G+KLLVP +ASLY+PG + D +K +VD+GTGYY+EK+ + ++KV+ L ++ Sbjct: 60 EGQKLLVPASASLYIPGKIVDNKKFMVDIGTGYYVEKSAEAAIAFYQKKVDKLNKESVQI 119 Query: 435 LEMATKKKSIADEMGMFLQAKLRQAS 358 ++ +K + + ++A++RQA+ Sbjct: 120 QDIIKEK----TQYSLSIEAQIRQAA 141
>PFD5_SCHPO (O94307) Probable prefoldin subunit 5 (Byr1-binding protein Bob1)| Length = 154 Score = 65.5 bits (158), Expect = 2e-10 Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%) Frame = -3 Query: 612 GKKLLVPLTASLYVPGTLD-DAEKVLVDVGTGYYIEKTMTQGKEYCERKVNLLKSNFDEL 436 GK++LVPLT+SLYVPG L+ K+LVD+GTGYY+EK+ + EY +RK L S+ + L Sbjct: 63 GKEVLVPLTSSLYVPGKLNLGNSKLLVDIGTGYYVEKSAGEATEYYKRKCEYLASSIENL 122
>PFD5_CAEEL (Q21993) Probable prefoldin subunit 5| Length = 152 Score = 55.5 bits (132), Expect = 2e-07 Identities = 26/76 (34%), Positives = 44/76 (57%) Frame = -3 Query: 696 DSLSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGY 517 +S + ++ TR E + +AL ++ + G L+PL+ SLY+ L D K LV++GTGY Sbjct: 34 ESFNALKGLLTRNEKSISALDDVKIATAGHTALIPLSESLYIRAELSDPSKHLVEIGTGY 93 Query: 516 YIEKTMTQGKEYCERK 469 ++E + K +RK Sbjct: 94 FVELDREKAKAIFDRK 109
>PFDA2_PYRKO (Q5JE63) Prefoldin alpha subunit 2 (GimC alpha subunit 2)| Length = 142 Score = 43.9 bits (102), Expect = 5e-04 Identities = 20/75 (26%), Positives = 41/75 (54%) Frame = -3 Query: 681 IRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIEKT 502 I T L A L L + +GK++ +PL + + + G +++ + V++DVG G + T Sbjct: 34 IDATITDLRTVDATLAYLKEKGKGKEIYIPLGSGVAIRGKIENPDDVIMDVGAGILVGAT 93 Query: 501 MTQGKEYCERKVNLL 457 + + +E E+++ L Sbjct: 94 VDEARENIEKRIKAL 108
>PFDA_PYRFU (Q8U3T0) Prefoldin alpha subunit (GimC alpha subunit)| Length = 146 Score = 42.7 bits (99), Expect = 0.001 Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 15/120 (12%) Frame = -3 Query: 687 SKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIE 508 ++++T LEN + + + ++LVP+ A ++ G + D ++ VG+GY +E Sbjct: 36 AEVQTVKETLENL------MKIEDENPEILVPIGAGSFLKGKIVDKNNAIISVGSGYAVE 89 Query: 507 KTMTQGKEYCERKVNLLKSNFDELL---------------EMATKKKSIADEMGMFLQAK 373 KT+ +Y + ++ +DE + E+A K + I + M + K Sbjct: 90 KTLEDAIKYLDERI----KEYDEAIRKTQEALNELQKRAAELAKKAQEIQQKQAMSFKLK 145
>PFDA1_PYRKO (Q5JIE3) Prefoldin alpha subunit 1 (GimC alpha subunit 1)| Length = 146 Score = 42.7 bits (99), Expect = 0.001 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Frame = -3 Query: 606 KLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIEKTMTQGKEYCERKV-----------NL 460 ++LVP+ A ++ G + DA+ +V VG GY ++K++ EY E+++ Sbjct: 57 EILVPIGAGSFLKGKIVDAKNAIVSVGAGYAVQKSLDDSIEYLEKRIKEYEEAIAKTQEA 116 Query: 459 LKSNFDELLEMATKKKSIADEMGMFLQAK 373 LK +L E+A + + I + M K Sbjct: 117 LKKLEAQLGELARQAQEIQQKQAMGFSVK 145
>PFDA_PYRAB (Q9UYI4) Prefoldin alpha subunit (GimC alpha subunit)| Length = 148 Score = 39.3 bits (90), Expect = 0.012 Identities = 18/75 (24%), Positives = 40/75 (53%) Frame = -3 Query: 687 SKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIE 508 ++++T LEN + + ++LVP+ A ++ G + D +V VG+GY +E Sbjct: 37 AEVQTVKETLENLK------KIEEEKPEILVPIGAGSFLKGIIVDKNNAIVSVGSGYAVE 90 Query: 507 KTMTQGKEYCERKVN 463 +++ + E+++N Sbjct: 91 RSVDDAISFLEKRLN 105
>PFDA_PYRHO (O58263) Prefoldin alpha subunit (GimC alpha subunit)| Length = 148 Score = 38.5 bits (88), Expect = 0.020 Identities = 19/86 (22%), Positives = 45/86 (52%) Frame = -3 Query: 687 SKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIE 508 ++++T LEN + + ++LVP+ A ++ G + D +V VG+GY +E Sbjct: 37 AEVQTVRETLENLK------KIEEEKPEILVPIGAGSFLKGVIVDKNNAIVSVGSGYAVE 90 Query: 507 KTMTQGKEYCERKVNLLKSNFDELLE 430 +++ + + E+++ +DE ++ Sbjct: 91 RSIDEAISFLEKRL----KEYDEAIK 112
>PFDA_METTH (O27646) Prefoldin alpha subunit (GimC alpha subunit)| Length = 141 Score = 38.1 bits (87), Expect = 0.026 Identities = 23/91 (25%), Positives = 42/91 (46%) Frame = -3 Query: 690 LSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYI 511 + +R + LE L ++ + G + LVP+ A ++ L D +V++ VG G I Sbjct: 28 MEAVRATISELEILEKTLSDIQGK-DGSETLVPVGAGSFIKAELKDTSEVIMSVGAGVAI 86 Query: 510 EKTMTQGKEYCERKVNLLKSNFDELLEMATK 418 +K E + + N L+S ++ E K Sbjct: 87 KKNFEDAMESIKSQKNELESTLQKMGENLRK 117
>PFDA_METKA (Q8TUY7) Prefoldin alpha subunit (GimC alpha subunit)| Length = 157 Score = 37.7 bits (86), Expect = 0.034 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 7/111 (6%) Frame = -3 Query: 663 RLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIEKTMTQGKE 484 R+E + EL +++LVP+ A +V + D E+V+V +G G +E+T+ + E Sbjct: 47 RVEETLKGVKELE---GDEEVLVPVGAQSFVRACVTDTERVIVGIGAGVAVERTIDEALE 103 Query: 483 YCERKVNLL-------KSNFDELLEMATKKKSIADEMGMFLQAKLRQASPS 352 + + L + EL + +K+ A E+ L+ R A S Sbjct: 104 SIDDQRQELEKARAEAQQKLQELAQELQEKQRKAQELAQQLEGAQRIAQQS 154
>PFDA_AQUAE (O66961) Putative prefoldin alpha subunit| Length = 149 Score = 36.2 bits (82), Expect = 0.098 Identities = 17/57 (29%), Positives = 32/57 (56%) Frame = -3 Query: 690 LSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTG 520 +S I + T L A A L L +GK++L+P+ A+ + + ++V++ +GTG Sbjct: 37 ISVINQSITDLRTAEATLRSLKELGKGKEVLIPVGATAQIKAKSEGVDEVIMSIGTG 93
>PFDA_METMA (Q8PYQ1) Prefoldin alpha subunit (GimC alpha subunit)| Length = 142 Score = 34.7 bits (78), Expect = 0.29 Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 3/94 (3%) Frame = -3 Query: 690 LSKIRTAATRLENATAALHELSLRPQGKKL---LVPLTASLYVPGTLDDAEKVLVDVGTG 520 +S ++ + + A A ++EL + + +VP+ YV + + +KV+V++G G Sbjct: 29 MSMVQASIASCDQAIATINELKAASEAGRAAETMVPVGFGSYVYAEVKNPDKVVVNLGAG 88 Query: 519 YYIEKTMTQGKEYCERKVNLLKSNFDELLEMATK 418 + E+T E R+ L +++ TK Sbjct: 89 FSAEETAEAAVETLNRRKEQLTKILEQMNASLTK 122
>UXT_MOUSE (Q9WTZ0) Protein UXT (Ubiquitously expressed transcript protein)| Length = 157 Score = 34.3 bits (77), Expect = 0.37 Identities = 15/54 (27%), Positives = 30/54 (55%) Frame = -3 Query: 597 VPLTASLYVPGTLDDAEKVLVDVGTGYYIEKTMTQGKEYCERKVNLLKSNFDEL 436 V L + +V + D ++ V +G G+++E T+ + ++ +RK +LL D L Sbjct: 71 VDLGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSL 124
>PFDA_ARCFU (O28216) Prefoldin alpha subunit (GimC alpha subunit)| Length = 137 Score = 34.3 bits (77), Expect = 0.37 Identities = 16/76 (21%), Positives = 42/76 (55%) Frame = -3 Query: 600 LVPLTASLYVPGTLDDAEKVLVDVGTGYYIEKTMTQGKEYCERKVNLLKSNFDELLEMAT 421 L+ L ++ + +++K+LVD+G+G +E+ + + E+ + ++ ++ N +++ M Sbjct: 58 LMNLGGGVFAYVDVKNSKKMLVDIGSGVVVEREVGEAIEFVKNRIKKIEENQEKMTSMLQ 117 Query: 420 KKKSIADEMGMFLQAK 373 + S A + L A+ Sbjct: 118 QVLSQAQRIQQELAAR 133
>PFDA2_METJA (Q58064) Prefoldin alpha subunit 2 (GimC alpha subunit 2)| Length = 147 Score = 33.5 bits (75), Expect = 0.64 Identities = 23/89 (25%), Positives = 41/89 (46%) Frame = -3 Query: 690 LSKIRTAATRLENATAALHELSLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYI 511 + ++ L + A L L +GK +LVP+ + V ++ +KV+V VG Sbjct: 26 IGRLDATIATLRQSLATLKSLKTLGEGKTVLVPVGSIAQVEMKVEKMDKVVVSVGQNISA 85 Query: 510 EKTMTQGKEYCERKVNLLKSNFDELLEMA 424 E + +Y E ++ L + F +LE A Sbjct: 86 ELEYEEALKYIEDEIKKLLT-FRLVLEQA 113
>UXT_HUMAN (Q9UBK9) Protein UXT (Ubiquitously expressed transcript protein)| Length = 157 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/47 (27%), Positives = 28/47 (59%) Frame = -3 Query: 597 VPLTASLYVPGTLDDAEKVLVDVGTGYYIEKTMTQGKEYCERKVNLL 457 V L + +V + D ++ V +G G+++E T+ + ++ +RK +LL Sbjct: 71 VDLGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLL 117
>OMPF_SERMA (O33980) Outer membrane protein F precursor (Porin ompF)| Length = 374 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = -3 Query: 633 ELSLRPQGKKLLVPLTASLYVPGTLDDAEKV-LVDVGTGYYIEKTMTQGKEYCERKVNLL 457 + LRP+ L +L VPG D + V V VGT YY K M+ Y + K+NLL Sbjct: 294 DFGLRPE-VSYLQSKGKNLNVPGVGSDQDLVKYVSVGTTYYFNKNMS---TYVDYKINLL 349 Query: 456 KSN 448 N Sbjct: 350 DDN 352
>PFDA_METMP (Q6LX82) Prefoldin alpha subunit (GimC alpha subunit)| Length = 144 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 7/95 (7%) Frame = -3 Query: 609 KKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIEKTM-------TQGKEYCERKVNLLKS 451 K++L+PL A ++ + EK+++ VG +EK + + E E+ L+ + Sbjct: 50 KEILLPLGAGAFIKAEAQNPEKIVLSVGVDVLLEKNVDDVIVDFQKSVEELEKTKELVNN 109 Query: 450 NFDELLEMATKKKSIADEMGMFLQAKLRQASPSSS 346 + + K +S ++ ++ + Q P ++ Sbjct: 110 QIQKTNQEIVKLRSELEKRAAAIEQRSAQMKPKTN 144
>PSTB3_ANASP (Q8YNJ3) Phosphate import ATP-binding protein pstB 3 (EC 3.6.3.27)| (Phosphate-transporting ATPase 3) (ABC phosphate transporter 3) Length = 268 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = -3 Query: 471 KVNLLKSNFDELLEMATKKKSIADEMGMFLQAKLRQASPSSSS*EQ 334 K+N K N DEL+E + +K ++ DE ++ KLRQ+ S S +Q Sbjct: 120 KINGYKGNMDELVERSLRKAALWDE----VKDKLRQSGASLSGGQQ 161
>CRBA4_CHICK (P49152) Beta crystallin A4| Length = 196 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = +3 Query: 228 NLVHTAKTAKERPVFPEGCERTTLAL-Q*SKGQGAHSALMNSSSAMPASAWLGETCPSRL 404 N H + + RP+ R+ L L + QG L + ++PA W G S L Sbjct: 84 NAYHVDRMSSFRPITCAVHGRSQLLLFEQENFQGRRGELSDDCPSLPALGWGGSAVGSFL 143 Query: 405 LCSSFWSPSQ 434 +CS W SQ Sbjct: 144 VCSGAWVCSQ 153
>OMPC_ECOL6 (Q8CVW1) Outer membrane protein C precursor (Porin ompC) (Outer| membrane protein 1B) Length = 375 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -3 Query: 624 LRPQGKKLLVPLTASLYVPGTLDDAEKVL--VDVGTGYYIEKTMTQGKEYCERKVNLLKS 451 L+ +GK L V V G D E +L VDVG YY K M+ Y + K+NLL Sbjct: 303 LQSKGKNLGV-------VAGRNYDDEDILKYVDVGATYYFNKNMS---TYVDYKINLLDD 352 Query: 450 N 448 N Sbjct: 353 N 353
>EF2_METKA (Q8TXJ4) Elongation factor 2 (EF-2) [Contains: Mka fusA intein]| Length = 1257 Score = 30.0 bits (66), Expect = 7.1 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = -3 Query: 558 DDAEKVLVDVGTGYYIEKTMTQGKEYCERKVNLLKSNFDELLE 430 DDA+ V GT ++++KT+ G +Y + LL F+E +E Sbjct: 1053 DDAKAVETVKGTNFFLDKTV--GLQYLNEVMELLIEGFEEAME 1093
>OMPC_ECO57 (Q8XE41) Outer membrane protein C precursor (Porin ompC) (Outer| membrane protein 1B) Length = 367 Score = 29.6 bits (65), Expect = 9.2 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -3 Query: 624 LRPQGKKLLVPLTASLYVPGTLDDAEKVL--VDVGTGYYIEKTMTQGKEYCERKVNLLKS 451 L+ +GK L V + G D E +L VDVG YY K M+ Y + K+NLL Sbjct: 295 LQSKGKNLGV-------INGRNYDDEDILKYVDVGATYYFNKNMS---TYVDYKINLLDD 344 Query: 450 N 448 N Sbjct: 345 N 345
>MURB_HELPY (O25963) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 259 Score = 29.6 bits (65), Expect = 9.2 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Frame = -3 Query: 627 SLRPQGKKLLVPLTASLYVPGTLDDAEKVLVDVGTGYYIEKTMTQGKEYCERKVNLLKSN 448 S+R KL P S + D A ++L VG Y K + KE+ VNL + Sbjct: 171 SMRKSHPKL--PNFGSCFKNPPNDHAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAE 228 Query: 447 FDELLEMATKKKS-IADEMGMFLQAKLR 367 F+E L++ K+ + E G+ L+ +++ Sbjct: 229 FEEALDLIELAKARVLQEYGIHLEEEVK 256
>FLGD_BUCAI (P57421) Basal-body rod modification protein flgD| Length = 236 Score = 29.6 bits (65), Expect = 9.2 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +3 Query: 15 MKASTSTRKSNNSM*K-RNQASKHQNTTKS*LIVKAIKVQTTQLRHTFDTEFQ 170 + ++ +K NN++ + NQ SK+QN S LI + + V ++ HT DT+ Q Sbjct: 75 INTASGMQKLNNTVDQFSNQISKNQNIQLSTLIGRHVMVPNKKIIHTKDTKTQ 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,481,083 Number of Sequences: 219361 Number of extensions: 1745010 Number of successful extensions: 5437 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5278 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5436 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)