| Clone Name | rbags17h14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009103.1| Triticum aestivum clone wkm2n.pk004.g13:fis, full insert mRNA sequence Length = 920 Score = 884 bits (446), Expect = 0.0 Identities = 640/702 (91%), Gaps = 17/702 (2%) Strand = Plus / Minus Query: 12 tatatgaaggcttcaacaagtaccaggaaaagcaacaacagtatgtgaaaacgaaaccaa 71 ||||||| || |||||||||||||||||||||||||||||| ||| ||||| ||||||| Sbjct: 861 tatatgacggtttcaacaagtaccaggaaaagcaacaacagcatgcaaaaacaaaaccaa 802 Query: 72 gcatccaaacatcaaaatacaacaaaatcataactgattgtcaaagccattaaagtgcag 131 ||||||| |||| ||||| ||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 801 gcatccagacatgaaaatgcaacaaactcataattgattgtcaaagccattaaag--cag 744 Query: 132 actacacagctaagacacac--gtttgacaccgagttccaaattactcgatgatga-gtc 188 | | || | ||||||||| |||||| ||||| ||||||||||||||| ||||| ||| Sbjct: 743 attgtgcatccaagacacacacgtttgataccgaattccaaattactcgaggatgaagtc 684 Query: 189 tggcgatagagcaggctggttcagtaaaccatctgagagaacctcgtacacacggccaaa 248 || |||| |||||||||| ||||||||| ||||| ||||||||| | ||||||||||||| Sbjct: 683 tgacgatggagcaggctgtttcagtaaatcatctcagagaaccttgcacacacggccaaa 624 Query: 249 acagctaaagaacgtcctgtgtttcctgagggctgc----gagcgaaccaccttggcgct 304 ||||||||||||| |||| |||| |||||||||||| |||||||||||| |||||| Sbjct: 623 acagctaaagaacctcctatgttccctgagggctgcgagtgagcgaaccaccccggcgct 564 Query: 305 c--------cagtaaagcaagggacagggtgcgcattctgctctcatgaactcgagctcg 356 | || |||||||||||||||| |||||||| ||||||| ||||||||||||| Sbjct: 563 ccaacaaggcaacaaagcaagggacagggcgcgcattccgctctcacgaactcgagctcg 504 Query: 357 gcgatgcctgcctcagcttggcttggagaaacatgcccatctcgtctgctatgctcttct 416 | ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| Sbjct: 503 gtgatgcctgcctcagcttggcttgcagaaacatgcccatttcatctgctatgctcttct 444 Query: 417 ttttggtcgccatctcaagtagttcatcgaagttggacttcagcaaattaactttccttt 476 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 443 ttttggtcgccatctcaagtagttcatcgaagttggacttcagcaaattaattttccttt 384 Query: 477 cacagtattcttttccttgagtcatagttttctcgatgtagtagcccgtgccaacgtcga 536 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 383 cacagtattcttttccttgagtcatagttttctcaatgtagtagccggtgccaacgtcga 324 Query: 537 cgaggaccttctcggcgtcgtcgagcgtgccgggcacgtagagggacgccgtgagcggca 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 cgaggaccttctcggcgtcgtcgagcgtgccgggcacgtagagggacgccgtgagcggca 264 Query: 597 cgagcagcttcttcccttgggggcggagggagagctcgtggagggcggccgtggcgttct 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 cgagcagcttcttcccttgggggcggagggagagctcgtggagggcggccgtggcgttct 204 Query: 657 cgaggcgagtggcggcggtgcggatcttggataggctgtcct 698 ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 203 cgaggcgggtggcggcggtgcggatcttggataggctgtcct 162
>gb|BT009608.1| Triticum aestivum clone wre1n.pk0099.h11:fis, full insert mRNA sequence Length = 1172 Score = 777 bits (392), Expect = 0.0 Identities = 550/600 (91%), Gaps = 7/600 (1%) Strand = Plus / Minus Query: 106 tgattgtcaaagccattaaagtgcagactacacagctaagac--acacgtttgacaccga 163 |||||||||||||||||||| |||||| | || | ||||| ||||||| || ||||| Sbjct: 1155 tgattgtcaaagccattaaattgcagattgtgcatccaagacccacacgttcgataccga 1096 Query: 164 gttccaaattactcgatgatga-gtctggcgatagagcaggctggttcagtaaaccatct 222 |||||||||||||||| ||||| ||||| ||||||||||||||| ||||||||| ||||| Sbjct: 1095 gttccaaattactcgaggatgaagtctgacgatagagcaggctgtttcagtaaatcatct 1036 Query: 223 gagagaacctcgtacacacggccaaaacagctaaagaacgtcctgtgtttcctgagggct 282 ||||||||| | ||||||||| ||||||||||||||||||||| |||| |||||||||| Sbjct: 1035 cagagaaccttgcacacacggctaaaacagctaaagaacgtcctatgttccctgagggct 976 Query: 283 g----cgagcgaaccaccttggcgctccagtaaagcaagggacagggtgcgcattctgct 338 | ||||||||||||| |||||||| |||||||||||||||| | || || || Sbjct: 975 gagagcgagcgaaccaccccagcgctccaacaaagcaagggacagggcacacactccact 916 Query: 339 ctcatgaactcgagctcggcgatgcctgcctcagcttggcttggagaaacatgcccatct 398 |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| | Sbjct: 915 ctcacgaactcgagctcggtgatgcctgcctcagcttggcttgcagaaacatgcccattt 856 Query: 399 cgtctgctatgctcttctttttggtcgccatctcaagtagttcatcgaagttggacttca 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 cgtctgctatgctcttctttttggtcgccatctcaagtagttcatcgaagttggacttca 796 Query: 459 gcaaattaactttcctttcacagtattcttttccttgagtcatagttttctcgatgtagt 518 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 795 gcaaattaattttcctttcacagtattcttttccttgagtcatagttttctcaatgtagt 736 Query: 519 agcccgtgccaacgtcgacgaggaccttctcggcgtcgtcgagcgtgccgggcacgtaga 578 |||| |||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 735 agccggtgccaacgtcgacgaggaccttctcggaatcgtcgagcgtgccgggtacataga 676 Query: 579 gggacgccgtgagcggcacgagcagcttcttcccttgggggcggagggagagctcgtgga 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 gggacgccgtgagcggcacgagcagcttcttcccttgggggcggagggagagctcgtgga 616 Query: 639 gggcggccgtggcgttctcgaggcgagtggcggcggtgcggatcttggataggctgtcct 698 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 615 gggcggccgtggcgttctcgaggcgggcggcggcggtgcggatcttggataggctgtcct 556
>ref|NM_197100.1| Oryza sativa (japonica cultivar-group) putative c-myc binding protein (OSJNBb0049A16.4), mRNA Length = 718 Score = 406 bits (205), Expect = e-110 Identities = 322/361 (89%) Strand = Plus / Minus Query: 338 tctcatgaactcgagctcggcgatgcctgcctcagcttggcttggagaaacatgcccatc 397 ||||||||||||| ||||||||||| |||||||||||||||||| |||| | ||||| Sbjct: 519 tctcatgaactcgggctcggcgatgactgcctcagcttggcttgtagaagccgacccatt 460 Query: 398 tcgtctgctatgctcttctttttggtcgccatctcaagtagttcatcgaagttggacttc 457 ||||| |||||| | ||||| || || |||||||||| ||||||||| || || |||||| Sbjct: 459 tcgtcggctatgtttttcttcttcgtagccatctcaactagttcatcaaaattagacttc 400 Query: 458 agcaaattaactttcctttcacagtattcttttccttgagtcatagttttctcgatgtag 517 |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 399 agcaaattaattttcctttcacagtattctttgccttcagtcatagttttctcgatgaag 340 Query: 518 tagcccgtgccaacgtcgacgaggaccttctcggcgtcgtcgagcgtgccgggcacgtag 577 ||||| ||||| ||||||||||| |||||||||| |||||| ||||||||||||||||| Sbjct: 339 tagccggtgccgacgtcgacgagcaccttctcggagtcgtccagcgtgccgggcacgtac 280 Query: 578 agggacgccgtgagcggcacgagcagcttcttcccttgggggcggagggagagctcgtgg 637 || |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| Sbjct: 279 agcgacgccgtgagcggcacgagcatcttcttccctttggggcggagggagaggtcgtgg 220 Query: 638 agggcggccgtggcgttctcgaggcgagtggcggcggtgcggatcttggataggctgtcc 697 || ||||| | ||||||||||||||| |||||||||| ||||||||||| ||||||||| Sbjct: 219 agcgcggcggaggcgttctcgaggcgggtggcggcggagcggatcttggtgaggctgtcc 160 Query: 698 t 698 | Sbjct: 159 t 159
>dbj|AK064048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D11, full insert sequence Length = 919 Score = 406 bits (205), Expect = e-110 Identities = 322/361 (89%) Strand = Plus / Minus Query: 338 tctcatgaactcgagctcggcgatgcctgcctcagcttggcttggagaaacatgcccatc 397 ||||||||||||| ||||||||||| |||||||||||||||||| |||| | ||||| Sbjct: 560 tctcatgaactcgggctcggcgatgactgcctcagcttggcttgtagaagccgacccatt 501 Query: 398 tcgtctgctatgctcttctttttggtcgccatctcaagtagttcatcgaagttggacttc 457 ||||| |||||| | ||||| || || |||||||||| ||||||||| || || |||||| Sbjct: 500 tcgtcggctatgtttttcttcttcgtagccatctcaactagttcatcaaaattagacttc 441 Query: 458 agcaaattaactttcctttcacagtattcttttccttgagtcatagttttctcgatgtag 517 |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 440 agcaaattaattttcctttcacagtattctttgccttcagtcatagttttctcgatgaag 381 Query: 518 tagcccgtgccaacgtcgacgaggaccttctcggcgtcgtcgagcgtgccgggcacgtag 577 ||||| ||||| ||||||||||| |||||||||| |||||| ||||||||||||||||| Sbjct: 380 tagccggtgccgacgtcgacgagcaccttctcggagtcgtccagcgtgccgggcacgtac 321 Query: 578 agggacgccgtgagcggcacgagcagcttcttcccttgggggcggagggagagctcgtgg 637 || |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| Sbjct: 320 agcgacgccgtgagcggcacgagcatcttcttccctttggggcggagggagaggtcgtgg 261 Query: 638 agggcggccgtggcgttctcgaggcgagtggcggcggtgcggatcttggataggctgtcc 697 || ||||| | ||||||||||||||| |||||||||| ||||||||||| ||||||||| Sbjct: 260 agcgcggcggaggcgttctcgaggcgggtggcggcggagcggatcttggtgaggctgtcc 201 Query: 698 t 698 | Sbjct: 200 t 200
>gb|AY108477.1| Zea mays PCO063318 mRNA sequence Length = 744 Score = 291 bits (147), Expect = 2e-75 Identities = 309/363 (85%) Strand = Plus / Minus Query: 336 gctctcatgaactcgagctcggcgatgcctgcctcagcttggcttggagaaacatgccca 395 ||||||||||||| | || ||| || || ||||||||||||||||| || | || |||| Sbjct: 522 gctctcatgaacttgggcccggtgacgcttgcctcagcttggcttgtagtagcaaaccca 463 Query: 396 tctcgtctgctatgctcttctttttggtcgccatctcaagtagttcatcgaagttggact 455 | |||||||||||| |||||||| || |||| ||||| | |||||| || || |||| Sbjct: 462 tatcgtctgctatggctttctttttcgtagccacctcaaccaattcatcaaaatttgact 403 Query: 456 tcagcaaattaactttcctttcacagtattcttttccttgagtcatagttttctcgatgt 515 ||| ||||||| ||||||||||||||||||||| || |||| ||| |||||||||||| Sbjct: 402 tcaataaattaattttcctttcacagtattctttcccctgagccatggttttctcgatga 343 Query: 516 agtagcccgtgccaacgtcgacgaggaccttctcggcgtcgtcgagcgtgccgggcacgt 575 |||| || ||||| || ||||||||||||||||| |||||||| || | ||||| |||| Sbjct: 342 agtaaccggtgccgacatcgacgaggaccttctccgcgtcgtccagtgaaccgggaacgt 283 Query: 576 agagggacgccgtgagcggcacgagcagcttcttcccttgggggcggagggagagctcgt 635 |||||||||| |||||||||||||||| |||||||||||||||||||||||| || || | Sbjct: 282 agagggacgcagtgagcggcacgagcatcttcttcccttgggggcggagggataggtcct 223 Query: 636 ggagggcggccgtggcgttctcgaggcgagtggcggcggtgcggatcttggataggctgt 695 |||| ||||| | |||||||||||| || |||||||||||||||||||||| ||||||| Sbjct: 222 ggagcgcggcggaggcgttctcgagtcgggtggcggcggtgcggatcttggtgaggctgt 163 Query: 696 cct 698 ||| Sbjct: 162 cct 160
>dbj|AK102742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106G17, full insert sequence Length = 1596 Score = 278 bits (140), Expect = 2e-71 Identities = 197/216 (91%) Strand = Plus / Minus Query: 430 ctcaagtagttcatcgaagttggacttcagcaaattaactttcctttcacagtattcttt 489 ||||| ||||||||| || || |||||||||||||||| ||||||||||||||||||||| Sbjct: 224 ctcaactagttcatcaaaattagacttcagcaaattaattttcctttcacagtattcttt 165 Query: 490 tccttgagtcatagttttctcgatgtagtagcccgtgccaacgtcgacgaggaccttctc 549 |||| ||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||| Sbjct: 164 gccttcagtcatagttttctcgatgaagtagccggtgccgacgtcgacgagcaccttctc 105 Query: 550 ggcgtcgtcgagcgtgccgggcacgtagagggacgccgtgagcggcacgagcagcttctt 609 || |||||| ||||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct: 104 ggagtcgtccagcgtgccgggcacgtacagcgacgccgtgagcggcacgagcatcttctt 45 Query: 610 cccttgggggcggagggagagctcgtggagggcggc 645 ||||| ||||||||||||||| |||||||| ||||| Sbjct: 44 ccctttggggcggagggagaggtcgtggagcgcggc 9 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 338 tctcatgaactcgagctcggcgatgcctgcctcagcttggcttggagaaacatgcccatc 397 ||||||||||||| ||||||||||| |||||||||||||||||| |||| | ||||| Sbjct: 1258 tctcatgaactcgggctcggcgatgactgcctcagcttggcttgtagaagccgacccatt 1199 Query: 398 tcgtctgctatgctcttctttttggtcgccatct 431 ||||| |||||| | ||||| || || ||||||| Sbjct: 1198 tcgtcggctatgtttttcttcttcgtagccatct 1165
>gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 genomic sequence, complete sequence Length = 129585 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 508 ctcgatgtagtagcccgtgccaacgtcgacgaggaccttctcggcgtcgtcgagcgtgcc 567 ||||||| ||||||| ||||| ||||||||||| |||||||||| |||||| |||||||| Sbjct: 100679 ctcgatgaagtagccggtgccgacgtcgacgagcaccttctcggagtcgtccagcgtgcc 100738 Query: 568 gggcacgtagagggacgccgtgagcggcacgagcagcttcttccct 613 ||||||||| || |||||||||||||||||||||| |||||||||| Sbjct: 100739 gggcacgtacagcgacgccgtgagcggcacgagcatcttcttccct 100784 Score = 103 bits (52), Expect = 8e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 611 ccttgggggcggagggagagctcgtggagggcggccgtggcgttctcgaggcgagtggcg 670 |||| ||||||||||||||| |||||||| ||||| | ||||||||||||||| |||||| Sbjct: 100886 cctttggggcggagggagaggtcgtggagcgcggcggaggcgttctcgaggcgggtggcg 100945 Query: 671 gcggtgcggatcttggataggctgtcct 698 |||| ||||||||||| |||||||||| Sbjct: 100946 gcggagcggatcttggtgaggctgtcct 100973 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 430 ctcaagtagttcatcgaagttggacttcagcaaattaactttcctttcacagtattcttt 489 ||||| ||||||||| || || |||||||||||||||| ||||||||||||||||||||| Sbjct: 92827 ctcaactagttcatcaaaattagacttcagcaaattaattttcctttcacagtattcttt 92886 Query: 490 tccttgagtcatagttttct 509 |||| |||||||||||||| Sbjct: 92887 gccttcagtcatagttttct 92906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 338 tctcatgaactcgagctcggcgatgcctgcctcagcttggcttggagaaacatgcccatc 397 ||||||||||||| ||||||||||| |||||||||||||||||| |||| | ||||| Sbjct: 91793 tctcatgaactcgggctcggcgatgactgcctcagcttggcttgtagaagccgacccatt 91852 Query: 398 tcgtctgctatgctcttctttttggtcgccatct 431 ||||| |||||| | ||||| || || ||||||| Sbjct: 91853 tcgtcggctatgtttttcttcttcgtagccatct 91886
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 508 ctcgatgtagtagcccgtgccaacgtcgacgaggaccttctcggcgtcgtcgagcgtgcc 567 ||||||| ||||||| ||||| ||||||||||| |||||||||| |||||| |||||||| Sbjct: 17960354 ctcgatgaagtagccggtgccgacgtcgacgagcaccttctcggagtcgtccagcgtgcc 17960295 Query: 568 gggcacgtagagggacgccgtgagcggcacgagcagcttcttccct 613 ||||||||| || |||||||||||||||||||||| |||||||||| Sbjct: 17960294 gggcacgtacagcgacgccgtgagcggcacgagcatcttcttccct 17960249 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 430 ctcaagtagttcatcgaagttggacttcagcaaattaactttcctttcacagtattcttt 489 ||||| ||||||||| || || |||||||||||||||| ||||||||||||||||||||| Sbjct: 17968206 ctcaactagttcatcaaaattagacttcagcaaattaattttcctttcacagtattcttt 17968147 Query: 490 tccttgagtcatagttttct 509 |||| |||||||||||||| Sbjct: 17968146 gccttcagtcatagttttct 17968127 Score = 103 bits (52), Expect = 8e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 611 ccttgggggcggagggagagctcgtggagggcggccgtggcgttctcgaggcgagtggcg 670 |||| ||||||||||||||| |||||||| ||||| | ||||||||||||||| |||||| Sbjct: 17960147 cctttggggcggagggagaggtcgtggagcgcggcggaggcgttctcgaggcgggtggcg 17960088 Query: 671 gcggtgcggatcttggataggctgtcct 698 |||| ||||||||||| |||||||||| Sbjct: 17960087 gcggagcggatcttggtgaggctgtcct 17960060 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 338 tctcatgaactcgagctcggcgatgcctgcctcagcttggcttggagaaacatgcccatc 397 ||||||||||||| ||||||||||| |||||||||||||||||| |||| | ||||| Sbjct: 17969240 tctcatgaactcgggctcggcgatgactgcctcagcttggcttgtagaagccgacccatt 17969181 Query: 398 tcgtctgctatgctcttctttttggtcgccatct 431 ||||| |||||| | ||||| || || ||||||| Sbjct: 17969180 tcgtcggctatgtttttcttcttcgtagccatct 17969147 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 aaaatacaacaaaatcataactgat 109 |||||||||||||||||||| |||| Sbjct: 985923 aaaatacaacaaaatcataaatgat 985899
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 508 ctcgatgtagtagcccgtgccaacgtcgacgaggaccttctcggcgtcgtcgagcgtgcc 567 ||||||| ||||||| ||||| ||||||||||| |||||||||| |||||| |||||||| Sbjct: 17969607 ctcgatgaagtagccggtgccgacgtcgacgagcaccttctcggagtcgtccagcgtgcc 17969548 Query: 568 gggcacgtagagggacgccgtgagcggcacgagcagcttcttccct 613 ||||||||| || |||||||||||||||||||||| |||||||||| Sbjct: 17969547 gggcacgtacagcgacgccgtgagcggcacgagcatcttcttccct 17969502 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 430 ctcaagtagttcatcgaagttggacttcagcaaattaactttcctttcacagtattcttt 489 ||||| ||||||||| || || |||||||||||||||| ||||||||||||||||||||| Sbjct: 17977459 ctcaactagttcatcaaaattagacttcagcaaattaattttcctttcacagtattcttt 17977400 Query: 490 tccttgagtcatagttttct 509 |||| |||||||||||||| Sbjct: 17977399 gccttcagtcatagttttct 17977380 Score = 103 bits (52), Expect = 8e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 611 ccttgggggcggagggagagctcgtggagggcggccgtggcgttctcgaggcgagtggcg 670 |||| ||||||||||||||| |||||||| ||||| | ||||||||||||||| |||||| Sbjct: 17969400 cctttggggcggagggagaggtcgtggagcgcggcggaggcgttctcgaggcgggtggcg 17969341 Query: 671 gcggtgcggatcttggataggctgtcct 698 |||| ||||||||||| |||||||||| Sbjct: 17969340 gcggagcggatcttggtgaggctgtcct 17969313 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 338 tctcatgaactcgagctcggcgatgcctgcctcagcttggcttggagaaacatgcccatc 397 ||||||||||||| ||||||||||| |||||||||||||||||| |||| | ||||| Sbjct: 17978493 tctcatgaactcgggctcggcgatgactgcctcagcttggcttgtagaagccgacccatt 17978434 Query: 398 tcgtctgctatgctcttctttttggtcgccatct 431 ||||| |||||| | ||||| || || ||||||| Sbjct: 17978433 tcgtcggctatgtttttcttcttcgtagccatct 17978400 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 aaaatacaacaaaatcataactgat 109 |||||||||||||||||||| |||| Sbjct: 985920 aaaatacaacaaaatcataaatgat 985896
>emb|AL358789.22| Human DNA sequence from clone RP11-507C22 on chromosome 1 Contains the 5' end of the MCOLN2 gene for mucolipin 2, the MCOLN3 gene for mucolipin 3, the gene for testis development protein NYD-SP29 (NYD-SP29) and two CpG islands, complete sequence Length = 165799 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 39 aaaagcaacaacagtatgtgaaa 61 ||||||||||||||||||||||| Sbjct: 156979 aaaagcaacaacagtatgtgaaa 157001
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 86 aaatacaacaaaatcataactgattgt 112 |||| |||||||||||||||||||||| Sbjct: 26730467 aaatgcaacaaaatcataactgattgt 26730493 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aaaatacaacaaaatcataa 104 |||||||||||||||||||| Sbjct: 24664881 aaaatacaacaaaatcataa 24664900
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 86 aaatacaacaaaatcataactgattgt 112 |||| |||||||||||||||||||||| Sbjct: 26658637 aaatgcaacaaaatcataactgattgt 26658663 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aaaatacaacaaaatcataa 104 |||||||||||||||||||| Sbjct: 24593087 aaaatacaacaaaatcataa 24593106
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 aaatacaacaaaatcataactgattgt 112 |||| |||||||||||||||||||||| Sbjct: 40655 aaatgcaacaaaatcataactgattgt 40629
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 aaatacaacaaaatcataactgattgt 112 |||| |||||||||||||||||||||| Sbjct: 68511 aaatgcaacaaaatcataactgattgt 68485
>gb|CP000119.1| Anabaena variabilis ATCC 29413 plasmid A, complete sequence Length = 366354 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 78 aaacatcaaaatacaacaaaat 99 |||||||||||||||||||||| Sbjct: 68330 aaacatcaaaatacaacaaaat 68351
>gb|U40415.2| Caenorhabditis elegans cosmid K02G10, complete sequence Length = 38439 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 458 agcaaattaactttcctttcac 479 |||||||||||||||||||||| Sbjct: 15751 agcaaattaactttcctttcac 15730
>ref|NM_076401.2| Caenorhabditis elegans K02G10.5 (K02G10.5) mRNA, complete cds Length = 2271 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 458 agcaaattaactttcctttcac 479 |||||||||||||||||||||| Sbjct: 1387 agcaaattaactttcctttcac 1408
>gb|AY106368.1| Zea mays PCO142961 mRNA sequence Length = 774 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 659 aggcgagtggcggcggtgcgga 680 |||||||||||||||||||||| Sbjct: 78 aggcgagtggcggcggtgcgga 57
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 aaaatacaacaaaatcataactgat 109 |||||||||||||||||||| |||| Sbjct: 16631 aaaatacaacaaaatcataaatgat 16655
>gb|AC132621.5| Mus musculus BAC clone RP23-102G6 from chromosome 12, complete sequence Length = 211730 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 ggacttcagcaaattaacttt 471 ||||||||||||||||||||| Sbjct: 114657 ggacttcagcaaattaacttt 114677
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 657 cgaggcgagtggcggcggtgc 677 ||||||||||||||||||||| Sbjct: 2348040 cgaggcgagtggcggcggtgc 2348020
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 aaaatacaacaaaatcataactgat 109 |||||||||||||||||||| |||| Sbjct: 985923 aaaatacaacaaaatcataaatgat 985899
>gb|AC109806.12| Mus musculus chromosome 1, clone RP23-310C14, complete sequence Length = 198227 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 catcaaaatacaacaaaatca 101 ||||||||||||||||||||| Sbjct: 89325 catcaaaatacaacaaaatca 89305
>gb|AC154105.2| Mus musculus BAC clone RP24-457N12 from chromosome 12, complete sequence Length = 237236 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 ggacttcagcaaattaacttt 471 ||||||||||||||||||||| Sbjct: 59500 ggacttcagcaaattaacttt 59480
>emb|AL928703.9| Mouse DNA sequence from clone RP23-308K19 on chromosome 2, complete sequence Length = 109891 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 ctttcacagtattcttttcct 493 ||||||||||||||||||||| Sbjct: 46658 ctttcacagtattcttttcct 46678
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 ccttctcggcgtcgtcgagcg 563 ||||||||||||||||||||| Sbjct: 1363515 ccttctcggcgtcgtcgagcg 1363495
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 cgtcgagcgtgccgggcacg 574 |||||||||||||||||||| Sbjct: 2725440 cgtcgagcgtgccgggcacg 2725421
>gb|AY780550.1| Homo sapiens hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome) (HPRT1) gene, complete cds Length = 44436 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aaaatacaacaaaatcataa 104 |||||||||||||||||||| Sbjct: 13089 aaaatacaacaaaatcataa 13070
>ref|XM_953436.1| Neurospora crassa OR74A hypothetical protein (NCU09830.1) partial mRNA Length = 4218 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 cgtcgtcgagcgtgccgggc 571 |||||||||||||||||||| Sbjct: 3235 cgtcgtcgagcgtgccgggc 3216
>ref|XM_330479.1| Neurospora crassa OR74A hypothetical protein (NCU09830.1) partial mRNA Length = 4218 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 cgtcgtcgagcgtgccgggc 571 |||||||||||||||||||| Sbjct: 3235 cgtcgtcgagcgtgccgggc 3216
>gb|AC167124.2| Mus musculus chromosome 1, clone wi1-2628G8, complete sequence Length = 38440 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tctgctatgctcttcttttt 420 |||||||||||||||||||| Sbjct: 17044 tctgctatgctcttcttttt 17025
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 tctcggcgtcgtcgagcgtg 565 |||||||||||||||||||| Sbjct: 1811089 tctcggcgtcgtcgagcgtg 1811108
>gb|AC005039.1| Homo sapiens BAC clone RP11-512E16 from 7, complete sequence Length = 151316 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gctatgctcttctttttggt 423 |||||||||||||||||||| Sbjct: 150252 gctatgctcttctttttggt 150233
>emb|CR354584.8| Zebrafish DNA sequence from clone DKEY-7B6 in linkage group 12, complete sequence Length = 218091 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ggagaaacatgcccatctcg 400 |||||||||||||||||||| Sbjct: 92081 ggagaaacatgcccatctcg 92100
>gb|AC114007.6| Mus musculus BAC clone RP23-187G1 from chromosome 14, complete sequence Length = 203514 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ctttcctttcacagtattct 487 |||||||||||||||||||| Sbjct: 61329 ctttcctttcacagtattct 61348
>gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complete sequence Length = 200807 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aaatacaacaaaatcataac 105 |||||||||||||||||||| Sbjct: 93138 aaatacaacaaaatcataac 93157
>gb|AC142315.1| Pan troglodytes BAC clone RP43-48P12 from 7, complete sequence Length = 178928 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gctatgctcttctttttggt 423 |||||||||||||||||||| Sbjct: 177472 gctatgctcttctttttggt 177453
>gb|AC142341.1| Pan troglodytes BAC clone RP43-43C1 from 7, complete sequence Length = 132532 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gctatgctcttctttttggt 423 |||||||||||||||||||| Sbjct: 9025 gctatgctcttctttttggt 9006
>gb|AC137081.30| Medicago truncatula clone mth2-10j6, complete sequence Length = 132253 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aacatcaaaatacaacaaaa 98 |||||||||||||||||||| Sbjct: 44536 aacatcaaaatacaacaaaa 44555
>emb|AL133407.25| Human DNA sequence from clone RP3-395K14 on chromosome 6q13-14.3 Contains part of a novel gene, complete sequence Length = 163431 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 acttcagcaaattaactttc 472 |||||||||||||||||||| Sbjct: 18940 acttcagcaaattaactttc 18921
>ref|XM_784992.1| PREDICTED: Strongylocentrotus purpuratus similar to Transcription factor 7-like 2 (HMG box transcription factor 4) (T-cell-specific transcription factor 4) (TCF-4) (mTCF-4) (LOC585155), mRNA Length = 1908 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 552 cgtcgtcgagcgtgccgggcacgt 575 |||||||||||| ||||||||||| Sbjct: 1466 cgtcgtcgagcgggccgggcacgt 1489
>ref|XM_966951.1| PREDICTED: Tribolium castaneum similar to CG4769-PA (LOC660744), mRNA Length = 1294 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 gcggcacgagcagcttcttc 610 |||||||||||||||||||| Sbjct: 656 gcggcacgagcagcttcttc 637
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 cgtcgacgaggaccttctcg 550 |||||||||||||||||||| Sbjct: 36185 cgtcgacgaggaccttctcg 36166
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 626 gagagctcgtggagggcggc 645 |||||||||||||||||||| Sbjct: 31433 gagagctcgtggagggcggc 31452
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 catcaaaatacaacaaaatcataa 104 ||||||||||| |||||||||||| Sbjct: 46107 catcaaaataccacaaaatcataa 46130
>emb|AL049658.1|ATT17F15 Arabidopsis thaliana DNA chromosome 3, BAC clone T17F15 Length = 107950 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 aaaacgaaaccaagcatcca 78 |||||||||||||||||||| Sbjct: 34031 aaaacgaaaccaagcatcca 34012
>emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E13 (ESSAII project) Length = 94695 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 catcaaaatacaacaaaatcataa 104 ||||||||||| |||||||||||| Sbjct: 69386 catcaaaataccacaaaatcataa 69409
>emb|BX908795.10| Zebrafish DNA sequence from clone DKEY-92J12 in linkage group 1, complete sequence Length = 142468 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 aaacatcaaaatacaacaaaatca 101 |||||||||||||||| ||||||| Sbjct: 101142 aaacatcaaaatacaataaaatca 101119
>gb|AC151907.5| Mus musculus BAC clone RP23-163E23 from chromosome 15, complete sequence Length = 197165 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 catccaaacatcaaaataca 92 |||||||||||||||||||| Sbjct: 184291 catccaaacatcaaaataca 184310
>emb|BX276182.13| Zebrafish DNA sequence from clone CH211-283K4 in linkage group 1, complete sequence Length = 145896 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 aaacatcaaaatacaacaaaatca 101 |||||||||||||||| ||||||| Sbjct: 128198 aaacatcaaaatacaataaaatca 128175
>emb|CR380839.1|PTB083D21 Pan troglodytes chromosome X BAC PTB-083D21, complete sequence Length = 186291 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aaaatacaacaaaatcataa 104 |||||||||||||||||||| Sbjct: 86598 aaaatacaacaaaatcataa 86617
>emb|CR556711.3| Mouse DNA sequence from clone RP23-415J12 on chromosome X, complete sequence Length = 195389 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aaaatcataactgattgtca 114 |||||||||||||||||||| Sbjct: 4146 aaaatcataactgattgtca 4165
>gb|AC175028.7| Medicago truncatula clone mth2-7e22, complete sequence Length = 131012 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aacatcaaaatacaacaaaa 98 |||||||||||||||||||| Sbjct: 43798 aacatcaaaatacaacaaaa 43779
>dbj|AK093698.1| Homo sapiens cDNA FLJ36379 fis, clone THYMU2008351, weakly similar to Calcium-regulated heat stable protein CRHSP-24 Length = 1921 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 gacgaggaccttctcggcgt 554 |||||||||||||||||||| Sbjct: 189 gacgaggaccttctcggcgt 208
>gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, complete sequence Length = 174696 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 caggaaaagcaacaacagta 54 |||||||||||||||||||| Sbjct: 78721 caggaaaagcaacaacagta 78740
>gb|AF318365.1|AF318365 Homo sapiens pp8607 mRNA, complete cds Length = 2316 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 ggcttcaacaagtaccaggaaaag 43 ||||||||||||||| |||||||| Sbjct: 2157 ggcttcaacaagtacaaggaaaag 2180
>gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164252 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gccaaaacagctaaagaacg 262 |||||||||||||||||||| Sbjct: 45836 gccaaaacagctaaagaacg 45817
>gb|M26434.1|HUMHPRTB Human hypoxanthine phosphoribosyltransferase (HPRT) gene, complete cds Length = 56737 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aaaatacaacaaaatcataa 104 |||||||||||||||||||| Sbjct: 12678 aaaatacaacaaaatcataa 12659
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 543 ccttctcggcgtcgtcgagcgtgc 566 |||||||||| ||||||||||||| Sbjct: 2778356 ccttctcggcatcgtcgagcgtgc 2778379
>gb|AC149128.3| Medicago truncatula chromosome 7 BAC clone mth2-139i2, complete sequence Length = 93434 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aacatcaaaatacaacaaaa 98 |||||||||||||||||||| Sbjct: 59853 aacatcaaaatacaacaaaa 59872
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 626 gagagctcgtggagggcggc 645 |||||||||||||||||||| Sbjct: 22936977 gagagctcgtggagggcggc 22936996
>gb|AC022167.7| Homo sapiens chromosome 16 clone RP11-77H9, complete sequence Length = 180705 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 gacgaggaccttctcggcgt 554 |||||||||||||||||||| Sbjct: 167971 gacgaggaccttctcggcgt 167990
>emb|AL929074.5| Zebrafish DNA sequence from clone CH211-101B14, complete sequence Length = 165705 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 aaacatcaaaatacaacaaaatca 101 |||||||||||||||| ||||||| Sbjct: 140566 aaacatcaaaatacaataaaatca 140543
>dbj|AB010698.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPL12 Length = 87434 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 aacgaaaccaagcatccaaacatcaaaa 88 |||||||||||| | ||||||||||||| Sbjct: 10218 aacgaaaccaagtacccaaacatcaaaa 10245
>gb|AC112670.11| Mus musculus chromosome 7, clone RP24-298H10, complete sequence Length = 161683 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 661 gcgagtggcggcggtgcgga 680 |||||||||||||||||||| Sbjct: 4193 gcgagtggcggcggtgcgga 4212
>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete sequence Length = 308311 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gccaaaacagctaaagaacg 262 |||||||||||||||||||| Sbjct: 157156 gccaaaacagctaaagaacg 157137
>gb|AC118735.8| Mus musculus chromosome 7, clone RP24-170M16, complete sequence Length = 142938 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 661 gcgagtggcggcggtgcgga 680 |||||||||||||||||||| Sbjct: 27435 gcgagtggcggcggtgcgga 27416
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 547 ctcggcgtcgtcgagcgtgccgggcacg 574 ||||||||||||||||| |||| ||||| Sbjct: 2591161 ctcggcgtcgtcgagcgcgccgcgcacg 2591188
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143895 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aaaatacaacaaaatcataa 104 |||||||||||||||||||| Sbjct: 109747 aaaatacaacaaaatcataa 109766
>gb|AC004383.1|AC004383 Human Chromosome X clone bWXD187, complete sequence Length = 156461 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aaaatacaacaaaatcataa 104 |||||||||||||||||||| Sbjct: 55870 aaaatacaacaaaatcataa 55851
>emb|AL663056.11| Mouse DNA sequence from clone RP23-24O15 on chromosome X, complete sequence Length = 197729 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 aacaagtaccaggaaaagcaacaa 49 |||||||||||||||||| ||||| Sbjct: 88915 aacaagtaccaggaaaagaaacaa 88892
>emb|AL022017.1|DMC190E7 Drosophila melanogaster cosmid clone 190E7 Length = 26100 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gccaaaacagctaaagaacg 262 |||||||||||||||||||| Sbjct: 15941 gccaaaacagctaaagaacg 15922 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,545,481 Number of Sequences: 3902068 Number of extensions: 6545481 Number of successful extensions: 120244 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119380 Number of HSP's gapped (non-prelim): 860 length of query: 698 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 675 effective length of database: 17,143,297,704 effective search space: 11571725950200 effective search space used: 11571725950200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)