>DHGB_ACICA (P13650) Quinoprotein glucose dehydrogenase-B precursor (EC|
           1.1.5.2) (Glucose dehydrogenase-B
           [pyrroloquinoline-quinone]) (Soluble glucose
           dehydrogenase) (s-GDH)
          Length = 478

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 148 TIYTYDERIN-NGTKCS*LFPQCFHIVIPSAQYHFRPGKRSIM*LPNSYLLPS 303
           T+YT  +  N N   C  +   C+  V PS+ Y ++ GK++I    N+ L+PS
Sbjct: 347 TLYTVQDTYNYNDPTCGEMTYICWPTVAPSSAYVYKGGKKAITGWENTLLVPS 399

>VNS3_AHSV2 (Q64914) Nonstructural protein NS3 [Contains: Nonstructural protein|
           NS3A]
          Length = 218

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
 Frame = -2

Query: 601 ASMVKNMSPDVMAN-MGEQFGMK--LSKEDAAKAQQAMSSLSPEDLDRMMKWMDKAQQGV 431
           AS ++ MS  ++   M    G    L  E AA    A +   PE + ++     K Q G+
Sbjct: 39  ASQMETMSLGILNQAMSSSAGASGALKDEKAAFGAMAEALRDPEPIRKI-----KRQVGI 93

Query: 430 EVAKKTKNWLLG--RKGLILAIVMLILAFILQRLGFIG 323
           +  K  K  L G  RK LIL I+M I A +      +G
Sbjct: 94  QTLKALKVELSGMRRKRLILKIIMFICANVTMATSLVG 131

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 14/60 (23%), Positives = 35/60 (58%)
 Frame = -2

Query: 595 MVKNMSPDVMANMGEQFGMKLSKEDAAKAQQAMSSLSPEDLDRMMKWMDKAQQGVEVAKK 416
           +VK +   V   +GE+  +++ +E A++  + +S +S ED+  + + + K ++ +E+  K
Sbjct: 152 VVKTLPSKVPVEIGEETKIEIREEPASEVLEEVSRISYEDIGGLSEQLGKIREMIELPLK 211

>ST1S1_BRARE (Q6PH37) Cytosolic sulfotransferase 1 (EC 2.8.2.-) (SULT1 ST1)|
          Length = 299

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 249 KVILGGWDDNVEALWEESRTFCTIVYSF 166
           K + G W D+V   WE+ +T+  ++Y F
Sbjct: 171 KSVFGPWYDHVNGYWEKKQTYSNLLYLF 198

>PML_MOUSE (Q60953) Probable transcription factor PML|
          Length = 808

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = -3

Query: 225 DNV--EALWEESRTFCTIVYSFVICVNCNRLLEVNGGVLSFGH*ADV*CYECLMLFCTKE 52
           DNV  E+L      F  IV +   C  C  L             AD  C+EC  L C+K 
Sbjct: 79  DNVFFESLQRRLAVFRQIVDAQAACTRCKGL-------------ADFWCFECEQLICSKC 125

Query: 51  FRVHIHY 31
           F  H  Y
Sbjct: 126 FEAHQWY 132

>MEXB_PSEAE (P52002) Multidrug resistance protein mexB (Multidrug-efflux|
           transporter mexB)
          Length = 1046

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 360 ISMTIARIRPFLPRSQFFVFFATSTPCCALSIHFII 467
           I  TIA + PF+P+    V+   +TP  + SIH ++
Sbjct: 306 IRQTIANLEPFMPQGMKVVYPYDTTPVVSASIHEVV 341

>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9|
          Length = 736

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 470 QNDEMDGQSTARSRSSKEDEELAPR*ERPDPS 375
           +N    G + ARSR+S+  E++APR   PDPS
Sbjct: 584 RNSPGPGGAPARSRTSEYYEDVAPRFATPDPS 615

>VNS3_AHSV1 (Q64903) Nonstructural protein NS3 [Contains: Nonstructural protein|
           NS3A]
          Length = 218

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
 Frame = -2

Query: 601 ASMVKNMSPDVMAN-MGEQFGMK--LSKEDAAKAQQAMSSLSPEDLDRMMKWMDKAQQGV 431
           AS ++ MS  ++   M    G    L  E AA    A +   PE + ++     K Q G+
Sbjct: 39  ASQMETMSLGILNQAMSSSAGASGALKDEKAAYGAVAEALRDPEPIRKI-----KRQVGI 93

Query: 430 EVAKKTKNWLLG--RKGLILAIVMLILAFILQRLGFIG 323
           +  K  K  L G  RK LIL I+M I A +      +G
Sbjct: 94  QTLKTLKVELSGMRRKKLILKIIMFICANVTMATSLVG 131

>FAD3C_ARATH (P46310) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 446

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/57 (24%), Positives = 26/57 (45%)
 Frame = +2

Query: 446 FVHPFHHSVQIFWRQ*RHSLLSFGSILLRQLHTKLLTHVCHHIRTHVLHHGCKHLPH 616
           ++H   H  ++ W + +      G +        L+ ++ H I THV+HH    +PH
Sbjct: 321 YLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPH 377

>FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-) (Fragment)
          Length = 404

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/57 (24%), Positives = 26/57 (45%)
 Frame = +2

Query: 446 FVHPFHHSVQIFWRQ*RHSLLSFGSILLRQLHTKLLTHVCHHIRTHVLHHGCKHLPH 616
           ++H   H  ++ W + +      G +        L+ ++ H I THV+HH    +PH
Sbjct: 279 YLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPH 335

>VNS3_AHSV8 (Q64905) Nonstructural protein NS3 [Contains: Nonstructural protein|
           NS3A]
          Length = 218

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
 Frame = -2

Query: 601 ASMVKNMSPDVMAN-MGEQFGMK--LSKEDAAKAQQAMSSLSPEDLDRMMKWMDKAQQGV 431
           AS ++ MS  ++   M    G    L  E AA    A +   PE + ++     K Q G+
Sbjct: 39  ASQMETMSLGILNQAMSSSAGASGALKDEKAAFGAVAEALRDPEPIRKI-----KRQVGI 93

Query: 430 EVAKKTKNWLLG--RKGLILAIVMLILAFILQRLGFIG 323
           +  K  K  L G  RK LIL I+M I A +      +G
Sbjct: 94  QTLKTLKVELSGMRRKKLILKIIMFICANVTMATSLVG 131

>PML_HUMAN (P29590) Probable transcription factor PML (Tripartite motif|
           protein 19) (RING finger protein 71)
          Length = 882

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
 Frame = -3

Query: 258 PWPKVILGGWDDNV--EALWEESRTFCTIVYSFVICVNCNRLLEVNGGVLSFGH*ADV*C 85
           PWP        DNV  E+L      +  IV +  +C  C                AD  C
Sbjct: 94  PWPLGADTPALDNVFFESLQRRLSVYRQIVDAQAVCTRCKES-------------ADFWC 140

Query: 84  YECLMLFCTKEFRVH 40
           +EC  L C K F  H
Sbjct: 141 FECEQLLCAKCFEAH 155

>POLC3_SYRVU (P58171) Polcalcin Syr v 3 (Calcium-binding pollen allergen Syr v|
           3)
          Length = 81

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = -2

Query: 538 KLSKEDAAKAQQAMSSLSPEDLDRMMKWMDKAQQGVEVAKKTKNWLLGRKGLI 380
           K+S  +  +  + + S++PE++ RMM  +D    G    ++ K++     GLI
Sbjct: 22  KISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGFISFEEFKDFARANSGLI 74

>MCPC_SALTY (Q02755) Methyl-accepting chemotaxis citrate transducer (Citrate|
           chemoreceptor protein)
          Length = 547

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -2

Query: 523 DAAKAQQAMSSLSPEDLDRMMKWMDKAQQGVEVAKKTKNWLLGRKGLILAIVMLILAFI- 347
           DA KAQ  M  +  + L +  + +  A    + +     W L   G+IL IV+++LAFI 
Sbjct: 154 DAQKAQDDMEQVYDQWLSQNAQLIKLASDQNQSSFTQMQWTL---GIILLIVLIVLAFIW 210

Query: 346 --LQRL 335
             LQR+
Sbjct: 211 LGLQRV 216

>FAD3C_SOYBN (P48621) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 453

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +2

Query: 437 LLCFVHPFHHSVQIFWRQ*RHSLLSFGSILLRQLHTKLLTHVCHHIRTHVLHHGCKHLPH 616
           L+ ++H   H  ++ W + +      G +         + ++ H I THV+HH    +PH
Sbjct: 326 LVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPH 385

>SECY_SYNY3 (P77964) Preprotein translocase secY subunit|
          Length = 442

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = -2

Query: 490 LSPEDLDRMMKWMDKAQQGVEVAKKTKNWLLGRKGLILAIVMLILAFI 347
           ++PED+ + +K M  +  G+   KKT+ +L G    +  +  + L+F+
Sbjct: 341 VNPEDVSKNLKKMGSSIPGIRPGKKTEQYLEGVLNRLTFLGAIFLSFV 388

>FACD2_RAT (Q6IV68) Fanconi anemia group D2 protein homolog (Protein FACD2)|
            (FanCD2)
          Length = 1451

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 482  WRQ*RHSLLSFGSILLRQLHTKLLTHVCHHIRTHVLHHGCKHLP 613
            +R+ R  +LS    L  QL+T+LL H+C H + H      KH+P
Sbjct: 1317 FRKHRDDVLSLLQTL--QLNTRLLHHLCGHSKIHQDTRLTKHVP 1358

>FAD3C_SESIN (P48620) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 447

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +2

Query: 437 LLCFVHPFHHSVQIFWRQ*RHSLLSFGSILLRQLHTKLLTHVCHHIRTHVLHHGCKHLPH 616
           L+ ++H   H  ++ W + +      G +         + ++ H I THV+HH    +PH
Sbjct: 322 LVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPH 381


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,778,641
Number of Sequences: 219361
Number of extensions: 1944815
Number of successful extensions: 5234
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5223
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)