ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483309.1| Oryza sativa (japonica cultivar-group), mRNA 319 6e-84
2gb|AY109501.1| Zea mays CL5942_1 mRNA sequence 256 8e-65
3gb|BT023978.1| Zea mays clone EL01N0324F04 mRNA sequence 248 2e-62
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
5dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete se... 74 6e-10
7emb|AL591645.35| Human DNA sequence from clone RP13-971O21 on ch... 44 0.57
8emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20... 44 0.57
9emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16... 44 0.57
10gb|AC175497.2| Pan troglodytes BAC clone CH251-951E13 from chrom... 44 0.57
11emb|AJ295057.1|HSA295057 Homo sapiens alpha satellite 5CEN-P14 a... 44 0.57
12gb|AC125789.2| Homo sapiens chromosome 5 clone CTD-2262G7, compl... 44 0.57
13gb|AC162177.2| Mus musculus BAC clone RP24-159F5 from chromosome... 42 2.3
14gb|AC019063.4| Homo sapiens BAC clone RP11-144H20 from 7, comple... 42 2.3
15emb|AL512884.15| Human DNA sequence from clone RP13-775K13 on ch... 42 2.3
16gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, comp... 42 2.3
17gb|AC022733.8| Homo sapiens chromosome 8, clone RP11-470M17, com... 42 2.3
18gb|AC139365.3| Homo sapiens chromosome 8, clone RP11-643N23, com... 42 2.3
19emb|CT025751.20| Mouse DNA sequence from clone RP24-365A12 on ch... 42 2.3
20ref|NM_119983.2| Arabidopsis thaliana aminoacylase/ metallopepti... 40 8.9
21gb|AC163498.3| Mus musculus chromosome 1, clone RP23-86J11, comp... 40 8.9
22ref|XM_759973.1| Theileria parva strain Muguga phosphate transpo... 40 8.9
23gb|AC025116.14| Mus musculus chromosome 1, clone RP23-124O19, co... 40 8.9
24emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M... 40 8.9
25emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 8.9
26gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Can... 40 8.9
27gb|AY074847.1| Arabidopsis thaliana AT4g38220/F20D10_340 mRNA, c... 40 8.9
28gb|AC155719.11| Mus musculus 6 BAC RP24-236K6 (Roswell Park Canc... 40 8.9
29gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosom... 40 8.9
30gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, comp... 40 8.9
31gb|AC153587.2| Mus musculus 6 BAC RP23-361L1 (Roswell Park Cance... 40 8.9
32emb|BX828338.1|CNS0A2YW Arabidopsis thaliana Full-length cDNA Co... 40 8.9
33emb|BX827283.1|CNS0A2SR Arabidopsis thaliana Full-length cDNA Co... 40 8.9
34dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, ... 40 8.9
35ref|XM_314399.2| Anopheles gambiae str. PEST ENSANGP00000000614 ... 40 8.9
36dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.9
37gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 8.9
38gb|AC145568.4| Mus musculus BAC clone RP24-473H20 from 6, comple... 40 8.9
39gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, co... 40 8.9
40dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 8.9 
>ref|XM_483309.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1371

 Score =  319 bits (161), Expect = 6e-84
 Identities = 338/397 (85%)
 Strand = Plus / Minus

                                                                        
Query: 257  gactcatatatcccaattcctttgaggtactcatctttgctcaggaactcgttatgatca 316
            ||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 1304 gactcgtatatcccaatccctttgaggtactcatctttgctcagaaactcattgtgatca 1245

                                                                        
Query: 317  tgaagcagtactggtgtgttcgccataggggaaaagccgaaagctggtatcccaatttcc 376
            || |||| ||  |||||||| | ||| || ||||| || || |||||||||||||   ||
Sbjct: 1244 tggagcaatatcggtgtgtttgtcattggagaaaaaccaaatgctggtatcccaagcacc 1185

                                                                        
Query: 377  cggaaataacgagcatcagtggaagccggaaatatctccggcttgccaagtttgccacca 436
            || || |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 1184 cgaaagtaacgagcatcagtagaggccgggaatatttccggcttaccaagtttgccaccg 1125

                                                                        
Query: 437  gctctcttcacagattcttcaaacacaggccaccatgggtttgagctgtcagcaattgtc 496
            |||||||||||||  |||||||| | || |||||||   |||||||| ||||||   || 
Sbjct: 1124 gctctcttcacagcctcttcaaatagagcccaccatacatttgagctatcagcaggggtg 1065

                                                                        
Query: 497  atggctggtttcccaaacttgtcaaggacagagcccttctgcttgaactcaaaggtcaag 556
            | |||||| || ||||| |||||||| ||||||  ||| || ||||||||||| ||||||
Sbjct: 1064 acggctggcttgccaaagttgtcaagtacagaggtcttttgtttgaactcaaatgtcaag 1005

                                                                        
Query: 557  ttgcgtgaacaaggtgcccattcttcagcaagacgcttctctagtgcttcagtatgaaca 616
            ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1004 ttgcgtgaagaaggtgcccattcttcagcaagacgcttctctagagcctcagtatgaaca 945

                                                 
Query: 617  ctaggagggattcgaatgtcaattcctacctctgctt 653
            |||||||||| ||| ||||| |  |||| ||||||||
Sbjct: 944  ctaggagggagtcggatgtctagacctatctctgctt 908
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>gb|AY109501.1| Zea mays CL5942_1 mRNA sequence
          Length = 888

 Score =  256 bits (129), Expect = 8e-65
 Identities = 315/377 (83%)
 Strand = Plus / Minus

                                                                       
Query: 189 ctcacagctctgccctagactcctcgtcgatgccgtcatctttgtgtgtggccagtgcct 248
           |||||||||||||||| || || || ||  ||||| ||||||  || |||||||||||| 
Sbjct: 390 ctcacagctctgccctggattcgtcatctttgccgccatcttcatgagtggccagtgccc 331

                                                                       
Query: 249 ttataatggactcatatatcccaattcctttgaggtactcatctttgctcaggaactcgt 308
           | || |||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||
Sbjct: 330 tgatgatggactcgtatatcccgattcccttgaggtactcgtctttgctcagaaactcgt 271

                                                                       
Query: 309 tatgatcatgaagcagtactggtgtgttcgccataggggaaaagccgaaagctggtatcc 368
           |||| ||||| |||||||  || |||||||||||||| |||||||| || |||||||  |
Sbjct: 270 tatggtcatggagcagtatcggggtgttcgccataggtgaaaagccaaatgctggtaatc 211

                                                                       
Query: 369 caatttcccggaaataacgagcatcagtggaagccggaaatatctccggcttgccaagtt 428
           | |||| |||||| || ||||| ||||| || || || ||||||||||||||||| ||||
Sbjct: 210 cgattttccggaagtagcgagcgtcagtagaggctgggaatatctccggcttgccgagtt 151

                                                                       
Query: 429 tgccaccagctctcttcacagattcttcaaacacaggccaccatgggtttgagctgtcag 488
           ||||  |||| |||||||||| |||||| | ||  | |||||||||||||| |||||| |
Sbjct: 150 tgccgtcagcgctcttcacagcttcttcgagcaacgtccaccatgggtttgtgctgtctg 91

                                                                       
Query: 489 caattgtcatggctggtttcccaaacttgtcaaggacagagcccttctgcttgaactcaa 548
           |   |||||||||||| |||||||| ||||| ||||||||   |||||| || ||||| |
Sbjct: 90  ccgctgtcatggctggcttcccaaagttgtccaggacagacatcttctgtttaaactcga 31

                            
Query: 549 aggtcaagttgcgtgaa 565
           |||||| ||||||||||
Sbjct: 30  aggtcaggttgcgtgaa 14
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>gb|BT023978.1| Zea mays clone EL01N0324F04 mRNA sequence
          Length = 1723

 Score =  248 bits (125), Expect = 2e-62
 Identities = 380/465 (81%)
 Strand = Plus / Minus

                                                                        
Query: 189  ctcacagctctgccctagactcctcgtcgatgccgtcatctttgtgtgtggccagtgcct 248
            |||||||||||||||| || || || ||  ||||| ||||||  || |||||||||||| 
Sbjct: 1395 ctcacagctctgccctggattcgtcatctttgccgccatcttcatgagtggccagtgccc 1336

                                                                        
Query: 249  ttataatggactcatatatcccaattcctttgaggtactcatctttgctcaggaactcgt 308
            | || |||||||| |||||||| ||||| |||||| |||| ||||||||||  |||||||
Sbjct: 1335 tgatgatggactcgtatatcccgattcccttgagggactcgtctttgctcaaaaactcgt 1276

                                                                        
Query: 309  tatgatcatgaagcagtactggtgtgttcgccataggggaaaagccgaaagctggtatcc 368
            |||| ||||| |||||||  || |||||||||||||| |||||||| || |||||||  |
Sbjct: 1275 tatggtcatggagcagtatcggggtgttcgccataggtgaaaagccaaatgctggtaatc 1216

                                                                        
Query: 369  caatttcccggaaataacgagcatcagtggaagccggaaatatctccggcttgccaagtt 428
            | |||| |||||| || ||||| ||||| || || || ||||||||||||||||| ||||
Sbjct: 1215 cgattttccggaagtagcgagcgtcagtagaggctgggaatatctccggcttgcccagtt 1156

                                                                        
Query: 429  tgccaccagctctcttcacagattcttcaaacacaggccaccatgggtttgagctgtcag 488
            ||||  |||| |||||||||| |||||||| ||  | |||||||||||||| |||||| |
Sbjct: 1155 tgccgtcagcgctcttcacagcttcttcaagcaacgtccaccatgggtttgtgctgtctg 1096

                                                                        
Query: 489  caattgtcatggctggtttcccaaacttgtcaaggacagagcccttctgcttgaactcaa 548
            |   |||||||||||| |||||||| ||||| |  |||||   |||||| || ||||| |
Sbjct: 1095 ccgctgtcatggctggcttcccaaagttgtccaaaacagacatcttctgtttaaactcca 1036

                                                                        
Query: 549  aggtcaagttgcgtgaacaaggtgcccattcttcagcaagacgcttctctagtgcttcag 608
            |||||  |||||| |||   ||||||||||| ||| ||||  || |||| ||||||||  
Sbjct: 1035 aggtcttgttgcgagaaggtggtgcccattcctcaacaaggtgcctctccagtgcttcca 976

                                                         
Query: 609  tatgaacactaggagggattcgaatgtcaattcctacctctgctt 653
             |||  ||||||||||||| || |||||||  |||||||||||||
Sbjct: 975  catgggcactaggagggatccggatgtcaagacctacctctgctt 931
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  139 bits (70), Expect = 1e-29
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                            
Query: 544      ctcaaaggtcaagttgcgtgaacaaggtgcccattcttcagcaagacgcttctctagtgc 603
                |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 25382570 ctcaaatgtcaagttgcgtgaagaaggtgcccattcttcagcaagacgcttctctagagc 25382629

                                                                  
Query: 604      ttcagtatgaacactaggagggattcgaatgtcaattcctacctctgctt 653
                 |||||||||||||||||||||| ||| ||||| |  |||| ||||||||
Sbjct: 25382630 ctcagtatgaacactaggagggagtcggatgtctagacctatctctgctt 25382679



 Score =  117 bits (59), Expect = 5e-23
 Identities = 179/219 (81%)
 Strand = Plus / Plus

                                                                            
Query: 311      tgatcatgaagcagtactggtgtgttcgccataggggaaaagccgaaagctggtatccca 370
                |||||||| |||| ||  |||||||| | ||| || ||||| || || ||||||||||||
Sbjct: 25381829 tgatcatggagcaatatcggtgtgtttgtcattggagaaaaaccaaatgctggtatccca 25381888

                                                                            
Query: 371      atttcccggaaataacgagcatcagtggaagccggaaatatctccggcttgccaagtttg 430
                |   |||| || |||||||||||||| || ||||| ||||| |||||||| |||||||||
Sbjct: 25381889 agcacccgaaagtaacgagcatcagtagaggccgggaatatttccggcttaccaagtttg 25381948

                                                                            
Query: 431      ccaccagctctcttcacagattcttcaaacacaggccaccatgggtttgagctgtcagca 490
                ||||| |||||||||||||  |||||||| | || |||||||   |||||||| ||||||
Sbjct: 25381949 ccaccggctctcttcacagcctcttcaaatagagcccaccatacatttgagctatcagca 25382008

                                                       
Query: 491      attgtcatggctggtttcccaaacttgtcaaggacagag 529
                   || | |||||| || ||||| |||||||| ||||||
Sbjct: 25382009 ggggtgacggctggcttgccaaagttgtcaagtacagag 25382047



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                 
Query: 257      gactcatatatcccaattcctttgaggtactcatctttgctcaggaact 305
                ||||| ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 25381529 gactcgtatatcccaatccctttgaggtactcatctttgctcagaaact 25381577
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>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0711H09
          Length = 185858

 Score =  139 bits (70), Expect = 1e-29
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                         
Query: 544   ctcaaaggtcaagttgcgtgaacaaggtgcccattcttcagcaagacgcttctctagtgc 603
             |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 13886 ctcaaatgtcaagttgcgtgaagaaggtgcccattcttcagcaagacgcttctctagagc 13945

                                                               
Query: 604   ttcagtatgaacactaggagggattcgaatgtcaattcctacctctgctt 653
              |||||||||||||||||||||| ||| ||||| |  |||| ||||||||
Sbjct: 13946 ctcagtatgaacactaggagggagtcggatgtctagacctatctctgctt 13995



 Score =  117 bits (59), Expect = 5e-23
 Identities = 179/219 (81%)
 Strand = Plus / Plus

                                                                         
Query: 311   tgatcatgaagcagtactggtgtgttcgccataggggaaaagccgaaagctggtatccca 370
             |||||||| |||| ||  |||||||| | ||| || ||||| || || ||||||||||||
Sbjct: 13145 tgatcatggagcaatatcggtgtgtttgtcattggagaaaaaccaaatgctggtatccca 13204

                                                                         
Query: 371   atttcccggaaataacgagcatcagtggaagccggaaatatctccggcttgccaagtttg 430
             |   |||| || |||||||||||||| || ||||| ||||| |||||||| |||||||||
Sbjct: 13205 agcacccgaaagtaacgagcatcagtagaggccgggaatatttccggcttaccaagtttg 13264

                                                                         
Query: 431   ccaccagctctcttcacagattcttcaaacacaggccaccatgggtttgagctgtcagca 490
             ||||| |||||||||||||  |||||||| | || |||||||   |||||||| ||||||
Sbjct: 13265 ccaccggctctcttcacagcctcttcaaatagagcccaccatacatttgagctatcagca 13324

                                                    
Query: 491   attgtcatggctggtttcccaaacttgtcaaggacagag 529
                || | |||||| || ||||| |||||||| ||||||
Sbjct: 13325 ggggtgacggctggcttgccaaagttgtcaagtacagag 13363



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                              
Query: 257   gactcatatatcccaattcctttgaggtactcatctttgctcaggaact 305
             ||||| ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 12845 gactcgtatatcccaatccctttgaggtactcatctttgctcagaaact 12893
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>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence
          Length = 116699

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                         
Query: 377   cggaaataacgagcatcagtggaagccggaaatatctccggcttgccaagtttgccacca 436
             |||||||| || ||||| |||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 43839 cggaaatagcgggcatctgtggaagcaggaaatatctccggcttaccaagtttcccacca 43898

              
Query: 437   g 437
             |
Sbjct: 43899 g 43899
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>emb|AL591645.35| Human DNA sequence from clone RP13-971O21 on chromosome Xp11.1-11.22,
             complete sequence
          Length = 148773

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 439   tctcttcacagattcttcaaacacag 464
             ||||||||||||||||||||| ||||
Sbjct: 21917 tctcttcacagattcttcaaaaacag 21942
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>emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20 on chromosome 6q11.1-12,
             complete sequence
          Length = 65237

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 439   tctcttcacagattcttcaaacacag 464
             |||||||||||||||| |||||||||
Sbjct: 40415 tctcttcacagattctacaaacacag 40440
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>emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16 on chromosome 1q32.1-32.3
              Contains a novel gene, the CAMK1G gene for
              calcium/calmodulin-dependent protein kinase IG  and the 3'
              end of the LAMB3 gene for laminin beta 3, complete sequence
          Length = 157875

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 470    catgggtttgagctgtcagcaa 491
              ||||||||||||||||||||||
Sbjct: 104510 catgggtttgagctgtcagcaa 104489
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>gb|AC175497.2| Pan troglodytes BAC clone CH251-951E13 from chromosome y, complete
             sequence
          Length = 198653

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 439   tctcttcacagattcttcaaacacag 464
             |||||||||||||||| |||||||||
Sbjct: 18958 tctcttcacagattctacaaacacag 18933
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>emb|AJ295057.1|HSA295057 Homo sapiens alpha satellite 5CEN-P14 and partial L1 element
          Length = 959

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 439 tctcttcacagattcttcaaacacag 464
           ||||||||||||||||||||| ||||
Sbjct: 702 tctcttcacagattcttcaaaaacag 677
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>gb|AC125789.2| Homo sapiens chromosome 5 clone CTD-2262G7, complete sequence
          Length = 135052

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 439   tctcttcacagattcttcaaacacag 464
             ||||||||||||||||||||| ||||
Sbjct: 63952 tctcttcacagattcttcaaaaacag 63977
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>gb|AC162177.2| Mus musculus BAC clone RP24-159F5 from chromosome 9, complete sequence
          Length = 148915

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 257    gactcatatatcccaattcctttga 281
              ||||||||| |||||||||||||||
Sbjct: 128050 gactcatatctcccaattcctttga 128026
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>gb|AC019063.4| Homo sapiens BAC clone RP11-144H20 from 7, complete sequence
          Length = 187282

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 442   cttcacagattcttcaaacac 462
             |||||||||||||||||||||
Sbjct: 79093 cttcacagattcttcaaacac 79073
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>emb|AL512884.15| Human DNA sequence from clone RP13-775K13 on chromosome Xp11.1-11.22,
             complete sequence
          Length = 157064

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   tctcttcacagattcttcaaa 459
             |||||||||||||||||||||
Sbjct: 88111 tctcttcacagattcttcaaa 88091
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>gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, complete sequence
          Length = 168531

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 42     atttattatttcaaggtccaattat 66
              |||||||||||||||||| ||||||
Sbjct: 159929 atttattatttcaaggtcgaattat 159905
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>gb|AC022733.8| Homo sapiens chromosome 8, clone RP11-470M17, complete sequence
          Length = 175202

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 42    atttattatttcaaggtccaattat 66
             |||||||||||||||||| ||||||
Sbjct: 98023 atttattatttcaaggtcgaattat 98047
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>gb|AC139365.3| Homo sapiens chromosome 8, clone RP11-643N23, complete sequence
          Length = 185549

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 441    tcttcacagattcttcaaaca 461
              |||||||||||||||||||||
Sbjct: 112585 tcttcacagattcttcaaaca 112565
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>emb|CT025751.20| Mouse DNA sequence from clone RP24-365A12 on chromosome 9, complete
             sequence
          Length = 176584

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 257   gactcatatatcccaattcctttga 281
             ||||||||| |||||||||||||||
Sbjct: 99983 gactcatatctcccaattcctttga 99959
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>ref|NM_119983.2| Arabidopsis thaliana aminoacylase/ metallopeptidase AT4G38220
            transcript variant AT4G38220.1 mRNA, complete cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  cttctgcttgaactcaaagg 551
            ||||||||||||||||||||
Sbjct: 1046 cttctgcttgaactcaaagg 1027
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>gb|AC163498.3| Mus musculus chromosome 1, clone RP23-86J11, complete sequence
          Length = 192061

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 591   gcttctctagtgcttcagtatgaa 614
             ||||||||||||||||| ||||||
Sbjct: 46302 gcttctctagtgcttcaatatgaa 46325
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>ref|XM_759973.1| Theileria parva strain Muguga phosphate transporter (TP02_0500)
            partial mRNA
          Length = 2241

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  ctcctcgtcgatgccgtcat 227
            ||||||||||||||||||||
Sbjct: 1587 ctcctcgtcgatgccgtcat 1568
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>gb|AC025116.14| Mus musculus chromosome 1, clone RP23-124O19, complete sequence
          Length = 233298

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 591   gcttctctagtgcttcagtatgaa 614
             ||||||||||||||||| ||||||
Sbjct: 86332 gcttctctagtgcttcaatatgaa 86309
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>emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M2 on chromosome 6q25.1-26
             Contains the 3' end of the gene for KIAA1116 and a
             ribosomal protein L17 (60S ribosomal protein L17)
             (RPL17)(rpL17) pseudogene, complete sequence
          Length = 107506

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   tgggtttgagctgtcagcaa 491
             ||||||||||||||||||||
Sbjct: 75878 tgggtttgagctgtcagcaa 75859
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    gcaagataagatcatctttc 188
              ||||||||||||||||||||
Sbjct: 190135 gcaagataagatcatctttc 190116
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>gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 442    cttcacagattcttcaaacacagg 465
              ||||||||||||| ||||||||||
Sbjct: 149302 cttcacagattctacaaacacagg 149279
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>gb|AY074847.1| Arabidopsis thaliana AT4g38220/F20D10_340 mRNA, complete cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  cttctgcttgaactcaaagg 551
            ||||||||||||||||||||
Sbjct: 1046 cttctgcttgaactcaaagg 1027
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>gb|AC155719.11| Mus musculus 6 BAC RP24-236K6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 179419

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   tgtgtggccagtgcctttat 252
             ||||||||||||||||||||
Sbjct: 36774 tgtgtggccagtgcctttat 36755
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>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence
          Length = 171057

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 420    tgccaagtttgccaccagctctct 443
              ||||||| ||||||||||||||||
Sbjct: 117320 tgccaagcttgccaccagctctct 117297
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>gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, complete sequence
          Length = 215022

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 617    ctaggagggattcgaatgtc 636
              ||||||||||||||||||||
Sbjct: 140778 ctaggagggattcgaatgtc 140797
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>gb|AC153587.2| Mus musculus 6 BAC RP23-361L1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232002

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    tgtgtggccagtgcctttat 252
              ||||||||||||||||||||
Sbjct: 227061 tgtgtggccagtgcctttat 227042
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>emb|BX828338.1|CNS0A2YW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH78ZD02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1439

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 532 cttctgcttgaactcaaagg 551
           ||||||||||||||||||||
Sbjct: 996 cttctgcttgaactcaaagg 977
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>emb|BX827283.1|CNS0A2SR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS32ZC10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1488

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  cttctgcttgaactcaaagg 551
            ||||||||||||||||||||
Sbjct: 1021 cttctgcttgaactcaaagg 1002
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>dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, map 22, complete
             sequences
          Length = 171187

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     gtgtaatatgctgaggaactacat 31
             |||||| |||||||||||||||||
Sbjct: 50284 gtgtaagatgctgaggaactacat 50307
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>ref|XM_314399.2| Anopheles gambiae str. PEST ENSANGP00000000614
           (ENSANGG00000000551), partial mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 cgtcatctttgtgtgtggcc 241
           ||||||||||||||||||||
Sbjct: 573 cgtcatctttgtgtgtggcc 592
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>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 8      gtgtaatatgctgaggaactacat 31
              |||||| |||||||||||||||||
Sbjct: 125058 gtgtaagatgctgaggaactacat 125081
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 481     gctgtcagcaattgtcatgg 500
               ||||||||||||||||||||
Sbjct: 2116456 gctgtcagcaattgtcatgg 2116475
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>gb|AC145568.4| Mus musculus BAC clone RP24-473H20 from 6, complete sequence
          Length = 201210

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 420    tgccaagtttgccaccagctctct 443
              ||||||| ||||||||||||||||
Sbjct: 180153 tgccaagcttgccaccagctctct 180176
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>gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, complete sequence
          Length = 182926

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    ctgtggttttgctttggctg 108
             ||||||||||||||||||||
Sbjct: 31641 ctgtggttttgctttggctg 31660
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>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP
              region, complete sequence
          Length = 150681

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 8      gtgtaatatgctgaggaactacat 31
              |||||| |||||||||||||||||
Sbjct: 113281 gtgtaagatgctgaggaactacat 113304


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,698,787
Number of Sequences: 3902068
Number of extensions: 5698787
Number of successful extensions: 103442
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103065
Number of HSP's gapped (non-prelim): 374
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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