ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17g15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009475.1| Triticum aestivum clone wr1.pk0032.h7:fis, full i... 789 0.0
2gb|AY104927.1| Zea mays PCO113544 mRNA sequence 323 4e-85
3gb|BT016683.1| Zea mays clone Contig516 mRNA sequence 311 2e-81
4dbj|AK119165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
5dbj|AK069541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
6dbj|AK104881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 5e-69
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
9emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa... 109 1e-20
10gb|DQ192536.1| Zea mays clone mmp123 genomic sequence 62 2e-06
11dbj|AB097405.1| Raphanus sativus RsProRS2 mRNA for prolyl-tRNA s... 60 9e-06
12dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone... 54 6e-04
13dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone... 54 6e-04
14dbj|AP004967.1| Lotus japonicus genomic DNA, chromosome 1, clone... 52 0.002
15gb|BT013426.1| Lycopersicon esculentum clone 132066F, mRNA sequence 50 0.009
16gb|AY568070.1| Naegleria gruberi strain NEG-M prolyl-tRNA synthe... 48 0.036
17gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete seq... 48 0.036
18gb|AC172877.1| Brassica rapa subsp. pekinensis clone KBrH042F19,... 46 0.14
19gb|AC098583.2| Homo sapiens BAC clone RP11-10G12 from 4, complet... 44 0.55
20gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, co... 44 0.55
21gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, c... 44 0.55
22emb|AL583891.15| Mouse DNA sequence from clone RP23-292L2 on chr... 44 0.55
23ref|NM_180405.1| Arabidopsis thaliana ATP binding / proline-tRNA... 42 2.2
24ref|NM_116077.2| Arabidopsis thaliana ATP binding / proline-tRNA... 42 2.2
25gb|AC005537.2| Homo sapiens BAC clone GS1-308H5 from 7, complete... 42 2.2
26gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 42 2.2
27emb|AL138651.1|ATT17J13 Arabidopsis thaliana DNA chromosome 3, B... 42 2.2
28gb|AY128720.1| Arabidopsis thaliana multifunctional aminoacyl-tR... 42 2.2
29gb|AY059812.1| Arabidopsis thaliana multifunctional aminoacyl-tR... 42 2.2
30gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
31gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
32gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
33ref|XM_859900.1| PREDICTED: Canis familiaris similar to splicing... 40 8.7
34ref|XM_533865.2| PREDICTED: Canis familiaris similar to splicing... 40 8.7
35ref|XM_859864.1| PREDICTED: Canis familiaris similar to splicing... 40 8.7
36ref|XM_749958.1| Aspergillus fumigatus Af293 nuclear envelope po... 40 8.7
37gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosom... 40 8.7
38gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosom... 40 8.7
39gb|AC117258.2| Mus musculus BAC clone RP24-491P21 from X, comple... 40 8.7
40gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete se... 40 8.7
41emb|AJ301617.1|DRE301617 Danio rerio partial mRNA for Frizzled 7... 40 8.7
42emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chr... 40 8.7
43emb|CR788242.3| Zebrafish DNA sequence from clone DKEY-239H16 in... 40 8.7
44gb|AC154796.2| Mus musculus BAC clone RP24-490B17 from chromosom... 40 8.7
45gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell ... 40 8.7
46gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Canc... 40 8.7
47gb|AC008902.5| Homo sapiens chromosome 5 clone CTD-2249G23, comp... 40 8.7
48gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswel... 40 8.7
49gb|AC157594.4| Mus musculus BAC clone RP23-279A2 from chromosome... 40 8.7
50dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
51dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
52gb|AY954953.1| Bacteriophage 85, complete genome 40 8.7
53gb|AC141636.4| Mus musculus BAC clone RP23-471D17 from chromosom... 40 8.7
54gb|AY104268.1| Zea mays PCO142257 mRNA sequence 40 8.7
55gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37... 40 8.7
56gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
57gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q... 40 8.7 
>gb|BT009475.1| Triticum aestivum clone wr1.pk0032.h7:fis, full insert mRNA sequence
          Length = 1291

 Score =  789 bits (398), Expect = 0.0
 Identities = 492/521 (94%), Gaps = 3/521 (0%)
 Strand = Plus / Minus

                                                                        
Query: 116  gaaataaacagatttgccagaacaaacggacaatgaaaatggcaatgtata-ggtggcag 174
            ||||||||||| ||||||||| ||||||  | | ||||||| ||||||||| |||| |||
Sbjct: 1105 gaaataaacagctttgccagagcaaacgatccacgaaaatgccaatgtataaggtgacag 1046

                                                                        
Query: 175  aacacagggatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaag 234
            |||||||  ||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1045 aacacag--atcaatagctgcgaccccagaatgaccacttttgagcaggctttccggaag 988

                                                                        
Query: 235  caaagcacacggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcg 294
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 987  caaagcacacggttccggaaggaagatctggctggtcaaatggagtacacaatgttttcg 928

                                                                        
Query: 295  cagctccaagttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcac 354
            |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 927  cagccccaagttcacctttggtccgagctttcacgtccttctccacctcctcttcatcac 868

                                                                        
Query: 355  accatggagccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgc 414
            |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 867  accatggagccaagatcaactttttgtcgttgagagccgctatgaattcatcccaggtgc 808

                                                                        
Query: 415  taatgattacaatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaa 474
            | ||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 807  tgatgattttaatgcaggcgtctctctttgctttcgctgtttccaacaagtttacttgaa 748

                                                                        
Query: 475  tcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttg 534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747  tcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttg 688

                                                                        
Query: 535  caccattgtctcgccggacaatgcgcacctgcttgttcgccagatcttttggacctatct 594
             ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 687  taccattgtctcgccggacaatacgcacctgcttgtttgccagatcttttggacctatct 628

                                                     
Query: 595  cgattctcaaaggaacacctttcatttcccattgagaatat 635
            | |||||||||||||||||||||||||||||||||||||||
Sbjct: 627  ctattctcaaaggaacacctttcatttcccattgagaatat 587



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 71/81 (87%), Gaps = 4/81 (4%)
 Strand = Plus / Minus

                                                                        
Query: 27   cagttgcagttatcatacgaaagcattactcaaaaatcaggtag----tataagaaataa 82
            ||||| ||| ||||| | ||||||||||||||||||||||||||    ||||||||||||
Sbjct: 1158 cagttacaggtatcacaggaaagcattactcaaaaatcaggtagtatatataagaaataa 1099

                                 
Query: 83   acagatttgccagaacaaacg 103
            |||| ||||||||| ||||||
Sbjct: 1098 acagctttgccagagcaaacg 1078
to top
>gb|AY104927.1| Zea mays PCO113544 mRNA sequence
          Length = 1954

 Score =  323 bits (163), Expect = 4e-85
 Identities = 379/451 (84%)
 Strand = Plus / Minus

                                                                        
Query: 184  atcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcaca 243
            |||| ||||||||||||||||| |||||||| |  || ||||||||||| ||||||||||
Sbjct: 1754 atcagtagctgcggccccagaacgaccacttcttcgctggctttccagatgcaaagcaca 1695

                                                                        
Query: 244  cggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctccaa 303
             ||| ||    ||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1694 gggtaccttctggaagttctggctgctcaaatggagtacacaatgttttcgcagctccaa 1635

                                                                        
Query: 304  gttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatggag 363
            |||| ||||| ||||||| ||| || || ||||| |  ||||||||||||||||||||||
Sbjct: 1634 gttccccttttgtccgagtttttacatctttctcaatttcctcctcatcacaccatggag 1575

                                                                        
Query: 364  ccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatta 423
            |||||||||||||||||| ||| ||||| | | ||||||||||||||||| | | ||   
Sbjct: 1574 ccaagatcaactttttgttattcagagcagttgtgaattcatcccaagtgttcacgacat 1515

                                                                        
Query: 424  caatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcca 483
             ||  ||||||||||||||| |||  |||||||  ||||  |||  ||||||| ||||||
Sbjct: 1514 gaacacaggcatctctcttttcttgggctgttttgaacagatttttttgaatctcatcca 1455

                                                                        
Query: 484  gcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattgt 543
            | |||||| ||||||  |||||||| | |||   ||| || |||||||||||||| ||||
Sbjct: 1454 gtaacactttaacctcttcaaccaaattggtcacagggatgtcaacctttgcaccgttgt 1395

                                                                        
Query: 544  ctcgccggacaatgcgcacctgcttgttcgccagatcttttggacctatctcgattctca 603
            | || |||||||  |||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 1394 cccggcggacaacacgcacctgtttgtttgccagatcttttggaccaatctcaattctca 1335

                                           
Query: 604  aaggaacacctttcatttcccattgagaata 634
            | |||||||||||||||||||| || |||||
Sbjct: 1334 atggaacacctttcatttcccagtgggaata 1304
to top
>gb|BT016683.1| Zea mays clone Contig516 mRNA sequence
          Length = 1416

 Score =  311 bits (157), Expect = 2e-81
 Identities = 379/452 (83%), Gaps = 1/452 (0%)
 Strand = Plus / Minus

                                                                        
Query: 184  atcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcaca 243
            |||| ||||||||||||||||| |||||||| |  || ||||||||||| ||||||||||
Sbjct: 1097 atcagtagctgcggccccagaacgaccacttcttcgctggctttccagatgcaaagcaca 1038

                                                                        
Query: 244  cggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctccaa 303
             ||| ||    ||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1037 gggtaccttctggaagttctggctgctcaaatggagtacacaatgttttcgcagctccaa 978

                                                                        
Query: 304  gttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatggag 363
            |||| ||||| ||||||| ||| || || ||||| |  ||||||||||||||||||||||
Sbjct: 977  gttccccttttgtccgagtttttacatctttctcaatttcctcctcatcacaccatggag 918

                                                                        
Query: 364  ccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatta 423
            |||||||||||||||||| ||| ||||| | | ||||||||||||||||| | | ||   
Sbjct: 917  ccaagatcaactttttgttattcagagcagttgtgaattcatcccaagtgttcacgacat 858

                                                                        
Query: 424  caatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcca 483
             ||  ||||||||||||||| |||  |||||||  ||||  |||  ||||||| ||||||
Sbjct: 857  gaacacaggcatctctcttttcttgggctgttttgaacagatttttttgaatctcatcca 798

                                                                        
Query: 484  gcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattgt 543
            | |||||| ||||||  |||||||| | |||   ||| || |||||||||||||| ||||
Sbjct: 797  gtaacactttaacctcttcaaccaaattggtcacagggatgtcaacctttgcaccgttgt 738

                                                                        
Query: 544  ctcgccggacaa-tgcgcacctgcttgttcgccagatcttttggacctatctcgattctc 602
            | || |||||||   |||||||| ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 737  cccggcggacaacancgcacctgtttgtttgccagatcttttggaccaatctcaattctc 678

                                            
Query: 603  aaaggaacacctttcatttcccattgagaata 634
            || |||||||||||||||||||| || |||||
Sbjct: 677  aatggaacacctttcatttcccagtgggaata 646
to top
>dbj|AK119165.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E06, full
           insert sequence
          Length = 979

 Score =  278 bits (140), Expect = 2e-71
 Identities = 374/452 (82%)
 Strand = Plus / Minus

                                                                       
Query: 183 gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcac 242
           ||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||| 
Sbjct: 745 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagcat 686

                                                                       
Query: 243 acggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctcca 302
             ||||||    || ||||||||||| |||||||| |||||||| || || |||||||| 
Sbjct: 685 gtggttccttctgggagatctggctgttcaaatggtgtacacaatgtcttggcagctccc 626

                                                                       
Query: 303 agttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatgga 362
           || |||||||| |||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 625 aggtcaccttttgtccgagccttcacatccttctcaacttcctcttcatcacaccatgga 566

                                                                       
Query: 363 gccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatt 422
           |||| |||||| ||||||||||| |||||  |||||||||||||||| ||| |||  |  
Sbjct: 565 gccaggatcaattttttgtcattcagagccactatgaattcatcccaggtgttaacaacc 506

                                                                       
Query: 423 acaatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcc 482
             || ||||||||||||||||  |||||| || || |||||||||   |||| | |||| 
Sbjct: 505 ttaaggcaggcatctctcttttgtttcgccgtctcaaacaagtttttctgaacctcatca 446

                                                                       
Query: 483 agcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattg 542
           || ||| |  |||| | |||||||||||| |  | |||||||||| | ||||||||||||
Sbjct: 445 agtaacccattaactttctcaaccaagtcagccgtaggaatatcagcttttgcaccattg 386

                                                                       
Query: 543 tctcgccggacaatgcgcacctgcttgttcgccagatcttttggacctatctcgattctc 602
           |||||||  ||||  ||  |||| ||||| |||| |||||||||||||||||| ||||| 
Sbjct: 385 tctcgcctaacaacacgggcctgattgtttgccatatcttttggacctatctcaattctt 326

                                           
Query: 603 aaaggaacacctttcatttcccattgagaata 634
           | |||||| |||||||| ||||| || |||||
Sbjct: 325 agaggaacgcctttcatctcccagtgggaata 294
to top
>dbj|AK069541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023E12, full
            insert sequence
          Length = 1995

 Score =  278 bits (140), Expect = 2e-71
 Identities = 374/452 (82%)
 Strand = Plus / Minus

                                                                        
Query: 183  gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcac 242
            ||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||| 
Sbjct: 1815 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagcat 1756

                                                                        
Query: 243  acggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctcca 302
              ||||||    || ||||||||||| |||||||| |||||||| || || |||||||| 
Sbjct: 1755 gtggttccttctgggagatctggctgttcaaatggtgtacacaatgtcttggcagctccc 1696

                                                                        
Query: 303  agttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatgga 362
            || |||||||| |||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 1695 aggtcaccttttgtccgagccttcacatccttctcaacttcctcttcatcacaccatgga 1636

                                                                        
Query: 363  gccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatt 422
            |||| |||||| ||||||||||| |||||  |||||||||||||||| ||| |||  |  
Sbjct: 1635 gccaggatcaattttttgtcattcagagccactatgaattcatcccaggtgttaacaacc 1576

                                                                        
Query: 423  acaatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcc 482
              || ||||||||||||||||  |||||| || || |||||||||   |||| | |||| 
Sbjct: 1575 ttaaggcaggcatctctcttttgtttcgccgtctcaaacaagtttttctgaacctcatca 1516

                                                                        
Query: 483  agcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattg 542
            || ||| |  |||| | |||||||||||| |  | |||||||||| | ||||||||||||
Sbjct: 1515 agtaacccattaactttctcaaccaagtcagccgtaggaatatcagcttttgcaccattg 1456

                                                                        
Query: 543  tctcgccggacaatgcgcacctgcttgttcgccagatcttttggacctatctcgattctc 602
            |||||||  ||||  ||  |||| ||||| |||| |||||||||||||||||| ||||| 
Sbjct: 1455 tctcgcctaacaacacgggcctgattgtttgccatatcttttggacctatctcaattctt 1396

                                            
Query: 603  aaaggaacacctttcatttcccattgagaata 634
            | |||||| |||||||| ||||| || |||||
Sbjct: 1395 agaggaacgcctttcatctcccagtgggaata 1364
to top
>dbj|AK104881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H01, full
            insert sequence
          Length = 1888

 Score =  270 bits (136), Expect = 5e-69
 Identities = 373/452 (82%)
 Strand = Plus / Minus

                                                                        
Query: 183  gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcac 242
            ||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||| 
Sbjct: 1654 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagcat 1595

                                                                        
Query: 243  acggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctcca 302
              ||||||    || ||||||||||| |||||||| |||||||| || || |||||||| 
Sbjct: 1594 gtggttccttctgggagatctggctgttcaaatggtgtacacaatgtcttggcagctccc 1535

                                                                        
Query: 303  agttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatgga 362
            || |||||||| |||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 1534 aggtcaccttttgtccgagccttcacatccttctcaacttcctcttcatcacaccatgga 1475

                                                                        
Query: 363  gccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatt 422
            |||| |||||| ||||||||||| |||||  |||||||||||||||| ||| |||  |  
Sbjct: 1474 gccaggatcaattttttgtcattcagagccactatgaattcatcccaggtgttaacaacc 1415

                                                                        
Query: 423  acaatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcc 482
              || ||||||||||||||||  |||||| || || |||||||||   |||| | |||| 
Sbjct: 1414 ttaaggcaggcatctctcttttgtttcgccgtctcaaacaagtttttctgaacctcatca 1355

                                                                        
Query: 483  agcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattg 542
            || ||| |  |||| | |||||||||||| |  | |||||||||  | ||||||||||||
Sbjct: 1354 agtaacccattaactttctcaaccaagtcagccgtaggaatatcggcttttgcaccattg 1295

                                                                        
Query: 543  tctcgccggacaatgcgcacctgcttgttcgccagatcttttggacctatctcgattctc 602
            |||||||  ||||  ||  |||| ||||| |||| |||||||||||||||||| ||||| 
Sbjct: 1294 tctcgcctaacaacacgggcctgattgtttgccatatcttttggacctatctcaattctt 1235

                                            
Query: 603  aaaggaacacctttcatttcccattgagaata 634
            | |||||| |||||||| ||||| || |||||
Sbjct: 1234 agaggaacgcctttcatctcccagtgggaata 1203
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  109 bits (55), Expect = 1e-20
 Identities = 169/207 (81%)
 Strand = Plus / Plus

                                                                            
Query: 343      cctcctcatcacaccatggagccaagatcaactttttgtcattgagagctgctatgaatt 402
                |||| ||||||||||||||||||| |||||| ||||||||||| |||||  |||||||||
Sbjct: 14942497 cctcttcatcacaccatggagccaggatcaattttttgtcattcagagccactatgaatt 14942556

                                                                            
Query: 403      catcccaagtgctaatgattacaatgcaggcatctctctttgctttcgctgtttccaaca 462
                ||||||| ||| |||  |    || ||||||||||||||||  |||||| || || ||||
Sbjct: 14942557 catcccaggtgttaacaaccttaaggcaggcatctctcttttgtttcgccgtctcaaaca 14942616

                                                                            
Query: 463      agtttgcttgaatcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaa 522
                |||||   |||| | |||| || ||| |  |||| | |||||||||||| |  | |||||
Sbjct: 14942617 agtttttctgaacctcatcaagtaacccattaactttctcaaccaagtcagccgtaggaa 14942676

                                           
Query: 523      tatcaacctttgcaccattgtctcgcc 549
                ||||| | |||||||||||||||||||
Sbjct: 14942677 tatcagcttttgcaccattgtctcgcc 14942703



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                           
Query: 183      gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagca 241
                ||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||
Sbjct: 14941698 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagca 14941756



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 258      agatctggctggtcaaatggagtacacaaggttttcgcagctccaagttcacctttggtc 317
                ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| |||
Sbjct: 14941917 agatctggctgttcaaatggtgtacacaatgtcttggcagctcccaggtcaccttttgtc 14941976

                                    
Query: 318      cgagctttcacgtccttctc 337
                ||||| ||||| ||||||||
Sbjct: 14941977 cgagccttcacatccttctc 14941996



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                            
Query: 561      acctgcttgttcgccagatcttttggacctatctcgattctcaaaggaacacctttcatt 620
                ||||| ||||| |||| |||||||||||||||||| ||||| | |||||| |||||||| 
Sbjct: 14943781 acctgattgtttgccatatcttttggacctatctcaattcttagaggaacgcctttcatc 14943840

                              
Query: 621      tcccattgagaata 634
                ||||| || |||||
Sbjct: 14943841 tcccagtgggaata 14943854
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  109 bits (55), Expect = 1e-20
 Identities = 169/207 (81%)
 Strand = Plus / Plus

                                                                            
Query: 343      cctcctcatcacaccatggagccaagatcaactttttgtcattgagagctgctatgaatt 402
                |||| ||||||||||||||||||| |||||| ||||||||||| |||||  |||||||||
Sbjct: 14896780 cctcttcatcacaccatggagccaggatcaattttttgtcattcagagccactatgaatt 14896839

                                                                            
Query: 403      catcccaagtgctaatgattacaatgcaggcatctctctttgctttcgctgtttccaaca 462
                ||||||| ||| |||  |    || ||||||||||||||||  |||||| || || ||||
Sbjct: 14896840 catcccaggtgttaacaaccttaaggcaggcatctctcttttgtttcgccgtctcaaaca 14896899

                                                                            
Query: 463      agtttgcttgaatcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaa 522
                |||||   |||| | |||| || ||| |  |||| | |||||||||||| |  | |||||
Sbjct: 14896900 agtttttctgaacctcatcaagtaacccattaactttctcaaccaagtcagccgtaggaa 14896959

                                           
Query: 523      tatcaacctttgcaccattgtctcgcc 549
                ||||| | |||||||||||||||||||
Sbjct: 14896960 tatcagcttttgcaccattgtctcgcc 14896986



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                           
Query: 183      gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagca 241
                ||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||
Sbjct: 14895981 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagca 14896039



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 258      agatctggctggtcaaatggagtacacaaggttttcgcagctccaagttcacctttggtc 317
                ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| |||
Sbjct: 14896200 agatctggctgttcaaatggtgtacacaatgtcttggcagctcccaggtcaccttttgtc 14896259

                                    
Query: 318      cgagctttcacgtccttctc 337
                ||||| ||||| ||||||||
Sbjct: 14896260 cgagccttcacatccttctc 14896279



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                            
Query: 561      acctgcttgttcgccagatcttttggacctatctcgattctcaaaggaacacctttcatt 620
                ||||| ||||| |||| |||||||||||||||||| ||||| | |||||| |||||||| 
Sbjct: 14898064 acctgattgtttgccatatcttttggacctatctcaattcttagaggaacgcctttcatc 14898123

                              
Query: 621      tcccattgagaata 634
                ||||| || |||||
Sbjct: 14898124 tcccagtgggaata 14898137
to top
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 174521

 Score =  109 bits (55), Expect = 1e-20
 Identities = 169/207 (81%)
 Strand = Plus / Minus

                                                                          
Query: 343    cctcctcatcacaccatggagccaagatcaactttttgtcattgagagctgctatgaatt 402
              |||| ||||||||||||||||||| |||||| ||||||||||| |||||  |||||||||
Sbjct: 139350 cctcttcatcacaccatggagccaggatcaattttttgtcattcagagccactatgaatt 139291

                                                                          
Query: 403    catcccaagtgctaatgattacaatgcaggcatctctctttgctttcgctgtttccaaca 462
              ||||||| ||| |||  |    || ||||||||||||||||  |||||| || || ||||
Sbjct: 139290 catcccaggtgttaacaaccttaaggcaggcatctctcttttgtttcgccgtctcaaaca 139231

                                                                          
Query: 463    agtttgcttgaatcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaa 522
              |||||   |||| | |||| || ||| |  |||| | |||||||||||| |  | |||||
Sbjct: 139230 agtttttctgaacctcatcaagtaacccattaactttctcaaccaagtcagccgtaggaa 139171

                                         
Query: 523    tatcaacctttgcaccattgtctcgcc 549
              ||||| | |||||||||||||||||||
Sbjct: 139170 tatcagcttttgcaccattgtctcgcc 139144



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                         
Query: 183    gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagca 241
              ||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||
Sbjct: 140149 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagca 140091



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                          
Query: 258    agatctggctggtcaaatggagtacacaaggttttcgcagctccaagttcacctttggtc 317
              ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| |||
Sbjct: 139930 agatctggctgttcaaatggtgtacacaatgtcttggcagctcccaggtcaccttttgtc 139871

                                  
Query: 318    cgagctttcacgtccttctc 337
              ||||| ||||| ||||||||
Sbjct: 139870 cgagccttcacatccttctc 139851



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                          
Query: 561    acctgcttgttcgccagatcttttggacctatctcgattctcaaaggaacacctttcatt 620
              ||||| ||||| |||| |||||||||||||||||| ||||| | |||||| |||||||| 
Sbjct: 138066 acctgattgtttgccatatcttttggacctatctcaattcttagaggaacgcctttcatc 138007

                            
Query: 621    tcccattgagaata 634
              ||||| || |||||
Sbjct: 138006 tcccagtgggaata 137993
to top
>gb|DQ192536.1| Zea mays clone mmp123 genomic sequence
          Length = 250

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 343 cctcctcatcacaccatggagccaagatcaactttttgt 381
           |||||||||| |||||||||||||||| |||||||||||
Sbjct: 199 cctcctcatcgcaccatggagccaagaccaactttttgt 237
to top
>dbj|AB097405.1| Raphanus sativus RsProRS2 mRNA for prolyl-tRNA synthetase, partial
           cds
          Length = 662

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 261 tctggctggtcaaatggagtacacaaggttttcgcagctccaagttcacctttggtccga 320
           |||||||| |||||||||| ||| | ||||||||| ||||||  ||||||||| || || 
Sbjct: 622 tctggctgctcaaatggagaacagagggttttcgctgctccagtttcacctttagtacgt 563

                                                             
Query: 321 gctttcacgtccttctcgacctcctcctcatcacaccatggagccaagat 370
           || || || ||  |||| || ||||||||||| ||||| ||||| |||||
Sbjct: 562 gccttgacatctctctccacttcctcctcatcgcaccagggagctaagat 513
to top
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557
          Length = 87695

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 591   atctcgattctcaaaggaacacctttcatttcccattgagaat 633
             ||||| ||||| | ||||||||||||||||||||| |||||||
Sbjct: 63082 atctctattcttagaggaacacctttcatttcccagtgagaat 63040



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 339   acctcctcctcatcacaccatggagccaagatcaacttt 377
             |||||||||||||||||||| || || ||||||| ||||
Sbjct: 63334 acctcctcctcatcacaccaaggtgctaagatcatcttt 63296
to top
>dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N11, TM0177,
              complete sequence
          Length = 133589

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 591    atctcgattctcaaaggaacacctttcatttcccattgagaat 633
              ||||| ||||| | ||||||||||||||||||||| |||||||
Sbjct: 121927 atctctattcttagaggaacacctttcatttcccagtgagaat 121969



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 339    acctcctcctcatcacaccatggagccaagatcaacttt 377
              |||||||||||||||||||| || || ||||||| ||||
Sbjct: 121675 acctcctcctcatcacaccaaggtgctaagatcatcttt 121713
to top
>dbj|AP004967.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT27L02, TM0144,
             complete sequence
          Length = 89959

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 561   acctgcttgttcgccagatcttttggacctatctcgattctcaaaggaacacctttcatt 620
             |||||||| || |||| ||| ||||| || || || ||||| | |||||| |||||||||
Sbjct: 17764 acctgcttatttgccaaatcctttggcccaatttcaattcttagaggaacgcctttcatt 17705

                           
Query: 621   tcccattgagaata 634
             ||||| ||||||||
Sbjct: 17704 tcccagtgagaata 17691



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 197   gccccagaatgaccacttttgagcaggctttccagaagcaaagca 241
             ||||||| |||||||||||   ||||||||||| || ||||||||
Sbjct: 19162 gccccagtatgaccactttgtcgcaggctttcctgatgcaaagca 19118
to top
>gb|BT013426.1| Lycopersicon esculentum clone 132066F, mRNA sequence
          Length = 1899

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 333  ttctcgacctcctcctcatcacaccatggagccaagatcaa 373
            ||||| || ||||||||||||||||| |||||||| |||||
Sbjct: 1577 ttctcaacatcctcctcatcacaccaaggagccaatatcaa 1537



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 576  agatcttttggacctatctcgattctcaaaggaacacctttcatttcccattgagaatat 635
            ||||||||||| ||||| || || || | ||| || || ||||||||||| |||||||||
Sbjct: 1334 agatcttttggtcctatttcaatcctaagagggacccccttcatttcccagtgagaatat 1275
to top
>gb|AY568070.1| Naegleria gruberi strain NEG-M prolyl-tRNA synthetase (proS) mRNA,
            partial cds
          Length = 1603

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 582  tttggacctatctcgattctcaaaggaacacc 613
            |||||||| || ||||||||||||||||||||
Sbjct: 1013 tttggaccaatttcgattctcaaaggaacacc 982
to top
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence
          Length = 148736

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 603   aaaggaacacctttcatttcccattgagaata 634
             ||||| ||||||||||||||||||| ||||||
Sbjct: 78092 aaagggacacctttcatttcccattcagaata 78061
to top
>gb|AC172877.1| Brassica rapa subsp. pekinensis clone KBrH042F19, complete sequence
          Length = 108651

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 591   atctcgattctcaaaggaacacctttcatttccca 625
             ||||| ||||||||||| ||||| |||||||||||
Sbjct: 45674 atctcaattctcaaagggacacccttcatttccca 45640
to top
>gb|AC098583.2| Homo sapiens BAC clone RP11-10G12 from 4, complete sequence
          Length = 127148

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 107   aatgaaatggaaataaacagatttgccaga 136
             ||||||||| ||||| ||||||||||||||
Sbjct: 98301 aatgaaatgaaaatatacagatttgccaga 98330
to top
>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence
          Length = 163597

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 105    tcaatgaaatggaaataaacag 126
              ||||||||||||||||||||||
Sbjct: 163071 tcaatgaaatggaaataaacag 163050
to top
>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence
          Length = 174914

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 105    tcaatgaaatggaaataaacag 126
              ||||||||||||||||||||||
Sbjct: 140606 tcaatgaaatggaaataaacag 140627
to top
>emb|AL583891.15| Mouse DNA sequence from clone RP23-292L2 on chromosome 15, complete
              sequence
          Length = 170132

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 218    agcaggctttccagaagcaaag 239
              ||||||||||||||||||||||
Sbjct: 161566 agcaggctttccagaagcaaag 161587
to top
>ref|NM_180405.1| Arabidopsis thaliana ATP binding / proline-tRNA ligase/ tRNA ligase
            AT3G62120 transcript variant AT3G62120.2 mRNA, complete
            cds
          Length = 1906

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 585  ggacctatctcgattctcaaaggaacacctttcatttccca 625
            ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 1309 ggaccaatctcaatcctcaatggaacacccttcatttccca 1269
to top
>ref|NM_116077.2| Arabidopsis thaliana ATP binding / proline-tRNA ligase/ tRNA ligase
            AT3G62120 transcript variant AT3G62120.1 mRNA, complete
            cds
          Length = 1919

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 585  ggacctatctcgattctcaaaggaacacctttcatttccca 625
            ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 1322 ggaccaatctcaatcctcaatggaacacccttcatttccca 1282
to top
>gb|AC005537.2| Homo sapiens BAC clone GS1-308H5 from 7, complete sequence
          Length = 176750

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    aatgaaatggaaataaacaga 127
              |||||||||||||||||||||
Sbjct: 135695 aatgaaatggaaataaacaga 135675
to top
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 585    ggacctatctcgattctcaaaggaacacctttcatttccca 625
              ||||||||||| || ||||||||||| || ||||| |||||
Sbjct: 174288 ggacctatctctatcctcaaaggaacgcccttcatctccca 174248
to top
>emb|AL138651.1|ATT17J13 Arabidopsis thaliana DNA chromosome 3, BAC clone T17J13
          Length = 85217

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 585   ggacctatctcgattctcaaaggaacacctttcatttccca 625
             ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 29570 ggaccaatctcaatcctcaatggaacacccttcatttccca 29610
to top
>gb|AY128720.1| Arabidopsis thaliana multifunctional aminoacyl-tRNA ligase-like
            protein (At3g62120) mRNA, complete cds
          Length = 1666

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 585  ggacctatctcgattctcaaaggaacacctttcatttccca 625
            ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 1193 ggaccaatctcaatcctcaatggaacacccttcatttccca 1153
to top
>gb|AY059812.1| Arabidopsis thaliana multifunctional aminoacyl-tRNA ligase-like
            protein (T17J13.8) mRNA, complete cds
          Length = 1808

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 585  ggacctatctcgattctcaaaggaacacctttcatttccca 625
            ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 1274 ggaccaatctcaatcctcaatggaacacccttcatttccca 1234
to top
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 433   catctctctttgctttcgctgttt 456
             ||||||||||||||||| ||||||
Sbjct: 46064 catctctctttgctttctctgttt 46041
to top
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10,
              complete sequence
          Length = 140282

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 433    catctctctttgctttcgctgttt 456
              ||||||||||||||||| ||||||
Sbjct: 114083 catctctctttgctttctctgttt 114060
to top
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11,
              complete sequence
          Length = 199348

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    acctcctcctcatcacacca 358
              ||||||||||||||||||||
Sbjct: 168547 acctcctcctcatcacacca 168528
to top
>ref|XM_859900.1| PREDICTED: Canis familiaris similar to splicing factor 4 isoform a,
           transcript variant 3 (LOC476661), mRNA
          Length = 1990

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 ctgtttccaacaagtttgct 470
           ||||||||||||||||||||
Sbjct: 229 ctgtttccaacaagtttgct 248
to top
>ref|XM_533865.2| PREDICTED: Canis familiaris similar to splicing factor 4 isoform a,
           transcript variant 1 (LOC476661), mRNA
          Length = 2053

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 ctgtttccaacaagtttgct 470
           ||||||||||||||||||||
Sbjct: 229 ctgtttccaacaagtttgct 248
to top
>ref|XM_859864.1| PREDICTED: Canis familiaris similar to splicing factor 4 isoform a,
           transcript variant 2 (LOC476661), mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 ctgtttccaacaagtttgct 470
           ||||||||||||||||||||
Sbjct: 229 ctgtttccaacaagtttgct 248
to top
>ref|XM_749958.1| Aspergillus fumigatus Af293 nuclear envelope pore membrane protein
            (Afu3g05500) partial mRNA
          Length = 3672

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 519  ggaatatcaacctttgcacc 538
            ||||||||||||||||||||
Sbjct: 2246 ggaatatcaacctttgcacc 2227
to top
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence
          Length = 176369

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 472    gaatcccatccagcaacact 491
              ||||||||||||||||||||
Sbjct: 134575 gaatcccatccagcaacact 134556
to top
>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence
          Length = 178746

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 472    gaatcccatccagcaacact 491
              ||||||||||||||||||||
Sbjct: 176071 gaatcccatccagcaacact 176090
to top
>gb|AC117258.2| Mus musculus BAC clone RP24-491P21 from X, complete sequence
          Length = 161458

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 75    agaaataaaca-gatttgccagaacaaa 101
             ||||||||||| ||||||||||||||||
Sbjct: 33841 agaaataaacatgatttgccagaacaaa 33868
to top
>gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete sequence
          Length = 94750

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 609   acacctttcatttcccattgagaa 632
             ||||||||||||||||||| ||||
Sbjct: 55993 acacctttcatttcccattcagaa 55970
to top
>emb|AJ301617.1|DRE301617 Danio rerio partial mRNA for Frizzled 7 protein (fz7 gene)
          Length = 1680

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gagcaggctttccagaagca 236
            ||||||||||||||||||||
Sbjct: 1429 gagcaggctttccagaagca 1448
to top
>emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chromosome 4 Contains part
             of the Ptprd gene for receptor type protein tyrosine
             phosphatase D, complete sequence
          Length = 186256

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   gtcaatgaaatggaaataaa 123
             ||||||||||||||||||||
Sbjct: 64531 gtcaatgaaatggaaataaa 64550
to top
>emb|CR788242.3| Zebrafish DNA sequence from clone DKEY-239H16 in linkage group 13,
              complete sequence
          Length = 143940

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     taagaaataaacagatttgc 92
              ||||||||||||||||||||
Sbjct: 125469 taagaaataaacagatttgc 125488
to top
>gb|AC154796.2| Mus musculus BAC clone RP24-490B17 from chromosome 17, complete
             sequence
          Length = 161075

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   ttttgagcaggctttccaga 232
             ||||||||||||||||||||
Sbjct: 53181 ttttgagcaggctttccaga 53200
to top
>gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 164941

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 614    tttcatttcccattgagaat 633
              ||||||||||||||||||||
Sbjct: 107720 tttcatttcccattgagaat 107739
to top
>gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156054

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    tataagaaataaacagattt 90
             ||||||||||||||||||||
Sbjct: 84489 tataagaaataaacagattt 84470
to top
>gb|AC008902.5| Homo sapiens chromosome 5 clone CTD-2249G23, complete sequence
          Length = 101352

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   aatgaaatggaaataaacagattt 130
             ||||||||||||||||||| ||||
Sbjct: 38454 aatgaaatggaaataaacacattt 38431
to top
>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 170356

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 614   tttcatttcccattgagaat 633
             ||||||||||||||||||||
Sbjct: 33420 tttcatttcccattgagaat 33439
to top
>gb|AC157594.4| Mus musculus BAC clone RP23-279A2 from chromosome 17, complete sequence
          Length = 220526

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   aaggaacacctttcatttcc 623
             ||||||||||||||||||||
Sbjct: 24470 aaggaacacctttcatttcc 24451
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 339      acctcctcctcatcacacca 358
                ||||||||||||||||||||
Sbjct: 25039499 acctcctcctcatcacacca 25039480
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 433    catctctctttgctttcgctgttt 456
              ||||||||||||||||| ||||||
Sbjct: 841641 catctctctttgctttctctgttt 841618
to top
>gb|AY954953.1| Bacteriophage 85, complete genome
          Length = 44283

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   catcccaagtgctaatgatt 422
             ||||||||||||||||||||
Sbjct: 24891 catcccaagtgctaatgatt 24910
to top
>gb|AC141636.4| Mus musculus BAC clone RP23-471D17 from chromosome 19, complete
             sequence
          Length = 165424

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   ggctttccagaagcaaagca 241
             ||||||||||||||||||||
Sbjct: 99168 ggctttccagaagcaaagca 99187
to top
>gb|AY104268.1| Zea mays PCO142257 mRNA sequence
          Length = 1687

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 584  tggacctatctcgattctcaaaggaacacctttcat 619
            |||||||||||| ||||| | |||||| ||||||||
Sbjct: 1015 tggacctatctctattcttacaggaacccctttcat 980
to top
>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete
             sequence
          Length = 244140

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 614   tttcatttcccattgagaat 633
             ||||||||||||||||||||
Sbjct: 44705 tttcatttcccattgagaat 44724
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 339      acctcctcctcatcacacca 358
                ||||||||||||||||||||
Sbjct: 25351089 acctcctcctcatcacacca 25351070
to top
>gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q24.2, complete sequence
          Length = 199668

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    acctcctcctcatcacacca 358
              ||||||||||||||||||||
Sbjct: 131419 acctcctcctcatcacacca 131400


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,202,753
Number of Sequences: 3902068
Number of extensions: 6202753
Number of successful extensions: 113638
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 113318
Number of HSP's gapped (non-prelim): 315
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top