| Clone Name | rbags17g14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 496 bits (250), Expect = e-137 Identities = 396/447 (88%) Strand = Plus / Minus Query: 221 ttagccttgctctttgtacggtgtccagatcagcttgctcacgtcgacgtccaagnnnnn 280 ||||||||| || ||||| |||||||||||||||||||| |||||||| || | | Sbjct: 1353 ttagccttgttccttgtagggtgtccagatcagcttgctaacgtcgacctcgaggccacc 1294 Query: 281 nngccccgcagccttgaggtggcggtcgaggacctttgggtccgcacagatgacgtgctg 340 | || || |||||||||||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 1293 ccggccggcggccttgaggtggcggtcgagaaccttggggtcagcgcagatgacgtgctg 1234 Query: 341 ccctttccggtactggatcaggtccaggctctgcagtgtgctcaagatgtcgtccgcttt 400 |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 1233 acctttccggtactggatcaggtccagactctgaagcgtgctcaagatgtcgtccgcttt 1174 Query: 401 tattgccgtcatgtcgctcagctccttaatagatatgttgctcttatgcttcttcaaaat 460 |||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 1173 tattgccgtcatatcgctaagctccttaatggatatgttgctcttatgtttctttaaaat 1114 Query: 461 ttccagaagtactctagtccaatagcctctataactgagcagaccaagatccgagagagg 520 || ||||| |||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 1113 ctctagaagcactctagtccaataacctctataactgagcagaccaagatcagaaagagg 1054 Query: 521 acgctccggtgttcccactttaccttcctttttagaaagctcataagagaaagcaatcag 580 ||||||||||| || |||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 1053 gcgctccggtgtccctactttaccttccttcttagaaagctcataggagaaggcaatcag 994 Query: 581 gaactttccgtaaccctttctttggtatggagggagagtgagaatgcaggccaaattata 640 |||||| || || || |||||||| ||||||||||||||||| ||||| |||||||| || Sbjct: 993 gaacttcccatatccttttctttgatatggagggagagtgaggatgcaagccaaattgta 934 Query: 641 agcttcctcagagtgtttctccttgga 667 || |||||||||||||||||||||||| Sbjct: 933 agattcctcagagtgtttctccttgga 907
>gb|AY122274.1| Zea mays cultivar B73 histone acetyltransferase protein HAC108 (HAC108) mRNA, complete cds Length = 1515 Score = 474 bits (239), Expect = e-130 Identities = 391/444 (88%) Strand = Plus / Minus Query: 221 ttagccttgctctttgtacggtgtccagatcagcttgctcacgtcgacgtccaagnnnnn 280 |||||||||||| ||||| || ||||| || |||||||| ||||||||||||| | Sbjct: 1359 ttagccttgctccttgtagggagtccatatgagcttgctaacgtcgacgtccaggccgcc 1300 Query: 281 nngccccgcagccttgaggtggcggtcgaggacctttgggtccgcacagatgacgtgctg 340 ||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 1299 ccgccccgccgccttgaggtggcggtcgaggaccttcgggtcagcgcagatgacgtgctg 1240 Query: 341 ccctttccggtactggatcaggtccaggctctgcagtgtgctcaagatgtcgtccgcttt 400 |||||| ||||||||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 1239 ccctttgcggtactggattaggtccaggctctgtagcgtgctcaagatgtcatctgcttt 1180 Query: 401 tattgccgtcatgtcgctcagctccttaatagatatgttgctcttatgcttcttcaaaat 460 |||||||||||||||||| || ||||| ||||||||||| | |||||| ||||| | ||| Sbjct: 1179 tattgccgtcatgtcgcttagttcctttatagatatgtttcccttatgtttctttagaat 1120 Query: 461 ttccagaagtactctagtccaatagcctctataactgagcagaccaagatccgagagagg 520 ||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1119 ttccagaagcactctagtccaataacctctatagctgagcagaccaagatcagagagagg 1060 Query: 521 acgctccggtgttcccactttaccttcctttttagaaagctcataagagaaagcaatcag 580 ||||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 1059 gcgctccggtgtcccaactttaccttccttcttggaaagttcatatgagaaagcaatcag 1000 Query: 581 gaactttccgtaaccctttctttggtatggagggagagtgagaatgcaggccaaattata 640 |||||| || || || |||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 999 gaacttcccatatccttttctttggtatggggggagagtgagaatgcaagccaaattata 940 Query: 641 agcttcctcagagtgtttctcctt 664 || ||| || |||||||| ||||| Sbjct: 939 agattcttcggagtgtttttcctt 916
>gb|AF440220.1|AF440220 Zea mays cultivar Ohio43 histone aceytl-transferase HAC108 (hac108) gene, complete cds Length = 1597 Score = 458 bits (231), Expect = e-125 Identities = 389/444 (87%) Strand = Plus / Minus Query: 221 ttagccttgctctttgtacggtgtccagatcagcttgctcacgtcgacgtccaagnnnnn 280 |||||||||||| ||||| || ||||| || |||||||| ||||||||||||| | Sbjct: 1370 ttagccttgctccttgtagggagtccatatgagcttgctaacgtcgacgtccaggccgcc 1311 Query: 281 nngccccgcagccttgaggtggcggtcgaggacctttgggtccgcacagatgacgtgctg 340 ||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 1310 ccgccccgccgccttgaggtggcggtcgaggaccttcgggtcagcgcagatgacgtgctg 1251 Query: 341 ccctttccggtactggatcaggtccaggctctgcagtgtgctcaagatgtcgtccgcttt 400 |||||| ||||||||||| |||||||||||||| || |||||||| ||||| || ||||| Sbjct: 1250 ccctttgcggtactggattaggtccaggctctgtagcgtgctcaatatgtcatctgcttt 1191 Query: 401 tattgccgtcatgtcgctcagctccttaatagatatgttgctcttatgcttcttcaaaat 460 |||||||||||||||||| || ||||| ||||||||||| | |||||| ||||| | ||| Sbjct: 1190 tattgccgtcatgtcgcttagttcctttatagatatgtttcccttatgtttctttagaat 1131 Query: 461 ttccagaagtactctagtccaatagcctctataactgagcagaccaagatccgagagagg 520 ||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1130 ttccagaagcactctagtccaataacctctatagctgagcagaccaagatcagagagagg 1071 Query: 521 acgctccggtgttcccactttaccttcctttttagaaagctcataagagaaagcaatcag 580 ||||||||||| || ||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 1070 gcgctccggtgtcccaactttaccttctttcttggaaagttcatatgagaaagcaatcag 1011 Query: 581 gaactttccgtaaccctttctttggtatggagggagagtgagaatgcaggccaaattata 640 |||||| || || || |||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1010 gaacttcccatatccttttctttggtatggggggagagtgagaatgcaagccaaattata 951 Query: 641 agcttcctcagagtgtttctcctt 664 || ||| || |||||||| ||||| Sbjct: 950 agattcttcggagtgtttttcctt 927
>gb|BT016729.1| Zea mays clone Contig562 mRNA sequence Length = 1597 Score = 450 bits (227), Expect = e-123 Identities = 388/444 (87%) Strand = Plus / Minus Query: 221 ttagccttgctctttgtacggtgtccagatcagcttgctcacgtcgacgtccaagnnnnn 280 |||||||||||| ||||| || |||| || |||||||| ||||||||||||| | Sbjct: 1420 ttagccttgctccttgtagggagtccgtatgagcttgctaacgtcgacgtccagggcgcc 1361 Query: 281 nngccccgcagccttgaggtggcggtcgaggacctttgggtccgcacagatgacgtgctg 340 ||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 1360 ccgccccgccgccttgaggtggcggtcgaggaccttcgggtcagcgcagatgacgtgctg 1301 Query: 341 ccctttccggtactggatcaggtccaggctctgcagtgtgctcaagatgtcgtccgcttt 400 |||||| ||||||||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 1300 ccctttgcggtactggattaggtccaggctctgtagcgtgctcaagatgtcatctgcttt 1241 Query: 401 tattgccgtcatgtcgctcagctccttaatagatatgttgctcttatgcttcttcaaaat 460 |||||||||||||||||| || ||||| ||||||||||| | |||||| ||||| | ||| Sbjct: 1240 tattgccgtcatgtcgcttagttcctttatagatatgtttcccttatgtttctttagaat 1181 Query: 461 ttccagaagtactctagtccaatagcctctataactgagcagaccaagatccgagagagg 520 ||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1180 ttccagaagcactctagtccaataacctctatagctgagcagaccaagatcagagagagg 1121 Query: 521 acgctccggtgttcccactttaccttcctttttagaaagctcataagagaaagcaatcag 580 ||||||||||| || ||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 1120 gcgctccggtgtcccaactttaccttctttcttggaaagttcatatgagaaagcaatcag 1061 Query: 581 gaactttccgtaaccctttctttggtatggagggagagtgagaatgcaggccaaattata 640 ||| || || || || |||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1060 gaatttcccatatccttttctttggtatggggggagagtgagaatgcaagccaaattata 1001 Query: 641 agcttcctcagagtgtttctcctt 664 || ||| || |||||||| ||||| Sbjct: 1000 agattcttcggagtgtttttcctt 977
>gb|AY104613.1| Zea mays PCO097531 mRNA sequence Length = 770 Score = 335 bits (169), Expect = 1e-88 Identities = 281/317 (88%), Gaps = 1/317 (0%) Strand = Plus / Minus Query: 349 ggtactggatcaggtccaggctctgcagtgtgctcaagatgtcgtccgctttt-attgcc 407 |||||||||| |||||||||||||| || |||||||| |||||||| |||||| |||||| Sbjct: 751 ggtactggattaggtccaggctctgtagcgtgctcaatatgtcgtctgcttttcattgcc 692 Query: 408 gtcatgtcgctcagctccttaatagatatgttgctcttatgcttcttcaaaatttccaga 467 ||||||||||| || ||||| ||||||||||| | |||||| ||||| | |||||||||| Sbjct: 691 gtcatgtcgcttagttcctttatagatatgtttcccttatgtttctttagaatttccaga 632 Query: 468 agtactctagtccaatagcctctataactgagcagaccaagatccgagagaggacgctcc 527 || |||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 631 agcactctagtccaataacctctatagctgagcagaccaagatcagagagagggcgctcc 572 Query: 528 ggtgttcccactttaccttcctttttagaaagctcataagagaaagcaatcaggaacttt 587 ||||| || ||||||||||| || || ||||| ||||| |||||||||||||||||||| Sbjct: 571 ggtgtcccaactttaccttctttcttggaaagttcatatgagaaagcaatcaggaacttc 512 Query: 588 ccgtaaccctttctttggtatggagggagagtgagaatgcaggccaaattataagcttcc 647 || || || |||||||||||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 511 ccatatccttttctttggtatggggggagagtgagaatgcaagccaaattataagattct 452 Query: 648 tcagagtgtttctcctt 664 || |||||||| ||||| Sbjct: 451 tcggagtgtttttcctt 435
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 222 bits (112), Expect = 1e-54 Identities = 186/213 (87%) Strand = Plus / Plus Query: 214 gcttagcttagccttgctctttgtacggtgtccagatcagcttgctcacgtcgacgtcca 273 |||||||||||||||| || ||||| |||||||||||||||||||| |||||||| || | Sbjct: 25905468 gcttagcttagccttgttccttgtagggtgtccagatcagcttgctaacgtcgacctcga 25905527 Query: 274 agnnnnnnngccccgcagccttgaggtggcggtcgaggacctttgggtccgcacagatga 333 | | || || |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 25905528 ggccaccccggccggcggccttgaggtggcggtcgagaaccttggggtcagcgcagatga 25905587 Query: 334 cgtgctgccctttccggtactggatcaggtccaggctctgcagtgtgctcaagatgtcgt 393 ||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 25905588 cgtgctgacctttccggtactggatcaggtccagactctgaagcgtgctcaagatgtcgt 25905647 Query: 394 ccgcttttattgccgtcatgtcgctcagctcct 426 ||||||||||||||||||| ||||| ||||||| Sbjct: 25905648 ccgcttttattgccgtcatatcgctaagctcct 25905680 Score = 178 bits (90), Expect = 2e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 424 ccttaatagatatgttgctcttatgcttcttcaaaatttccagaagtactctagtccaat 483 ||||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 25907024 ccttaatggatatgttgctcttatgtttctttaaaatctctagaagcactctagtccaat 25907083 Query: 484 agcctctataactgagcagaccaagatccgagagaggacgctccggtgttcccactttac 543 | |||||||||||||||||||||||||| || ||||| ||||||||||| || ||||||| Sbjct: 25907084 aacctctataactgagcagaccaagatcagaaagagggcgctccggtgtccctactttac 25907143 Query: 544 cttcctttttagaaagctcata 565 ||||||| |||||||||||||| Sbjct: 25907144 cttccttcttagaaagctcata 25907165 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 568 agaaagcaatcaggaactttccgtaaccctttctttggtatggagggagagtgagaatgc 627 |||| |||||||||||||| || || || |||||||| ||||||||||||||||| |||| Sbjct: 25907273 agaaggcaatcaggaacttcccatatccttttctttgatatggagggagagtgaggatgc 25907332 Query: 628 aggccaaattataagcttcctcagagtgtttctcct 663 | |||||||| |||| |||||||||||||||||||| Sbjct: 25907333 aagccaaattgtaagattcctcagagtgtttctcct 25907368
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 222 bits (112), Expect = 1e-54 Identities = 186/213 (87%) Strand = Plus / Plus Query: 214 gcttagcttagccttgctctttgtacggtgtccagatcagcttgctcacgtcgacgtcca 273 |||||||||||||||| || ||||| |||||||||||||||||||| |||||||| || | Sbjct: 75916 gcttagcttagccttgttccttgtagggtgtccagatcagcttgctaacgtcgacctcga 75975 Query: 274 agnnnnnnngccccgcagccttgaggtggcggtcgaggacctttgggtccgcacagatga 333 | | || || |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 75976 ggccaccccggccggcggccttgaggtggcggtcgagaaccttggggtcagcgcagatga 76035 Query: 334 cgtgctgccctttccggtactggatcaggtccaggctctgcagtgtgctcaagatgtcgt 393 ||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 76036 cgtgctgacctttccggtactggatcaggtccagactctgaagcgtgctcaagatgtcgt 76095 Query: 394 ccgcttttattgccgtcatgtcgctcagctcct 426 ||||||||||||||||||| ||||| ||||||| Sbjct: 76096 ccgcttttattgccgtcatatcgctaagctcct 76128 Score = 178 bits (90), Expect = 2e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 424 ccttaatagatatgttgctcttatgcttcttcaaaatttccagaagtactctagtccaat 483 ||||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 77472 ccttaatggatatgttgctcttatgtttctttaaaatctctagaagcactctagtccaat 77531 Query: 484 agcctctataactgagcagaccaagatccgagagaggacgctccggtgttcccactttac 543 | |||||||||||||||||||||||||| || ||||| ||||||||||| || ||||||| Sbjct: 77532 aacctctataactgagcagaccaagatcagaaagagggcgctccggtgtccctactttac 77591 Query: 544 cttcctttttagaaagctcata 565 ||||||| |||||||||||||| Sbjct: 77592 cttccttcttagaaagctcata 77613 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 568 agaaagcaatcaggaactttccgtaaccctttctttggtatggagggagagtgagaatgc 627 |||| |||||||||||||| || || || |||||||| ||||||||||||||||| |||| Sbjct: 77721 agaaggcaatcaggaacttcccatatccttttctttgatatggagggagagtgaggatgc 77780 Query: 628 aggccaaattataagcttcctcagagtgtttctcct 663 | |||||||| |||| |||||||||||||||||||| Sbjct: 77781 aagccaaattgtaagattcctcagagtgtttctcct 77816
>ref|NM_121011.2| Arabidopsis thaliana chromatin binding / nucleic acid binding / zinc ion binding AT5G09740 mRNA, complete cds Length = 1513 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || |||||||| ||||||||||| || ||||| ||||||| |||||| ||||| Sbjct: 1270 cggtccagaacctttggatccgcacagatcacatgctgtcctttcctgtactgtatcagt 1211 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 || |||||||| |||||||| || || || |||||||| ||||| |||| |||||||||| Sbjct: 1210 tctaggctctgaagtgtgcttaatatatcttccgctttgattgctgtcacgtcgctcagc 1151 Query: 423 tccttaatagatatgttgctcttatgcttcttcaaaatttc 463 ||||| ||||| ||||| | |||||| || ||||| ||||| Sbjct: 1150 tccttgatagaaatgtttcccttatgttttttcaagatttc 1110
>gb|AY086663.1| Arabidopsis thaliana clone 266771 mRNA, complete sequence Length = 1503 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || |||||||| ||||||||||| || ||||| ||||||| |||||| ||||| Sbjct: 1264 cggtccagaacctttggatccgcacagatcacatgctgtcctttcctgtactgtatcagt 1205 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 || |||||||| |||||||| || || || |||||||| ||||| |||| |||||||||| Sbjct: 1204 tctaggctctgaagtgtgcttaatatatcttccgctttgattgctgtcacgtcgctcagc 1145 Query: 423 tccttaatagatatgttgctcttatgcttcttcaaaatttc 463 ||||| ||||| ||||| | |||||| || ||||| ||||| Sbjct: 1144 tccttgatagaaatgtttcccttatgttttttcaagatttc 1104
>dbj|AK117126.1| Arabidopsis thaliana At5g09740 mRNA for putative embryogenic callus protein, complete cds, clone: RAFL16-66-G06 Length = 1279 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || |||||||| ||||||||||| || ||||| ||||||| |||||| ||||| Sbjct: 1036 cggtccagaacctttggatccgcacagatcacatgctgtcctttcctgtactgtatcagt 977 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 || |||||||| |||||||| || || || |||||||| ||||| |||| |||||||||| Sbjct: 976 tctaggctctgaagtgtgcttaatatatcttccgctttgattgctgtcacgtcgctcagc 917 Query: 423 tccttaatagatatgttgctcttatgcttcttcaaaatttc 463 ||||| ||||| ||||| | |||||| || ||||| ||||| Sbjct: 916 tccttgatagaaatgtttcccttatgttttttcaagatttc 876
>dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH16 Length = 68098 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || |||||||| ||||||||||| || ||||| ||||||| |||||| ||||| Sbjct: 43086 cggtccagaacctttggatccgcacagatcacatgctgtcctttcctgtactgtatcagt 43145 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 || |||||||| |||||||| || || || |||||||| ||||| |||| |||||||||| Sbjct: 43146 tctaggctctgaagtgtgcttaatatatcttccgctttgattgctgtcacgtcgctcagc 43205 Query: 423 tcct 426 |||| Sbjct: 43206 tcct 43209
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project) Length = 92491 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || |||||||| ||||||||||| || ||||| ||||||| |||||| ||||| Sbjct: 26498 cggtccagaacctttggatccgcacagatcacatgctgtcctttcctgtactgtatcagt 26439 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 || |||||||| |||||||| || || || |||||||| ||||| |||| |||||||||| Sbjct: 26438 tctaggctctgaagtgtgcttaatatatcttccgctttgattgctgtcacgtcgctcagc 26379 Query: 423 tcct 426 |||| Sbjct: 26378 tcct 26375
>ref|NM_125857.2| Arabidopsis thaliana chromatin binding / nucleic acid binding / zinc ion binding AT5G64610 mRNA, complete cds Length = 1532 Score = 99.6 bits (50), Expect = 1e-17 Identities = 131/158 (82%) Strand = Plus / Minus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || ||||| || ||||| ||||| ||||| || ||||||| ||| || ||||| Sbjct: 1277 cggtccagtaccttaggatccgcgcagattacgtgttgtcctttcctgtattgtatcagt 1218 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 |||| ||||||||| ||||| || || || || ||||| || || ||||||||||||||| Sbjct: 1217 tccaagctctgcagggtgcttaatatatcttctgctttaatcgctgtcatgtcgctcagc 1158 Query: 423 tccttaatagatatgttgctcttatgcttcttcaaaat 460 ||||| ||||||||||| | ||| ||||| |||||||| Sbjct: 1157 tccttgatagatatgtttcccttgtgctttttcaaaat 1120
>gb|BT000277.1| Arabidopsis thaliana histone acetyltransferase (At5g64610) mRNA, complete cds Length = 1475 Score = 99.6 bits (50), Expect = 1e-17 Identities = 131/158 (82%) Strand = Plus / Minus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || ||||| || ||||| ||||| ||||| || ||||||| ||| || ||||| Sbjct: 1256 cggtccagtaccttaggatccgcgcagattacgtgttgtcctttcctgtattgtatcagt 1197 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 |||| ||||||||| ||||| || || || || ||||| || || ||||||||||||||| Sbjct: 1196 tccaagctctgcagggtgcttaatatatcttctgctttaatcgctgtcatgtcgctcagc 1137 Query: 423 tccttaatagatatgttgctcttatgcttcttcaaaat 460 ||||| ||||||||||| | ||| ||||| |||||||| Sbjct: 1136 tccttgatagatatgtttcccttgtgctttttcaaaat 1099
>gb|AY099684.1| Arabidopsis thaliana histone acetyltransferase (At5g64610) mRNA, complete cds Length = 1538 Score = 99.6 bits (50), Expect = 1e-17 Identities = 131/158 (82%) Strand = Plus / Minus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || ||||| || ||||| ||||| ||||| || ||||||| ||| || ||||| Sbjct: 1283 cggtccagtaccttaggatccgcgcagattacgtgttgtcctttcctgtattgtatcagt 1224 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 |||| ||||||||| ||||| || || || || ||||| || || ||||||||||||||| Sbjct: 1223 tccaagctctgcagggtgcttaatatatcttctgctttaatcgctgtcatgtcgctcagc 1164 Query: 423 tccttaatagatatgttgctcttatgcttcttcaaaat 460 ||||| ||||||||||| | ||| ||||| |||||||| Sbjct: 1163 tccttgatagatatgtttcccttgtgctttttcaaaat 1126
>dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUB3 Length = 82188 Score = 71.9 bits (36), Expect = 3e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 303 cggtcgaggacctttgggtccgcacagatgacgtgctgccctttccggtactggatcagg 362 ||||| || ||||| || ||||| ||||| ||||| || ||||||| ||| || ||||| Sbjct: 47583 cggtccagtaccttaggatccgcgcagattacgtgttgtcctttcctgtattgtatcagt 47642 Query: 363 tccaggctctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagc 422 |||| ||||||||| ||||| || || || || ||||| || || ||||||||||||||| Sbjct: 47643 tccaagctctgcagggtgcttaatatatcttctgctttaatcgctgtcatgtcgctcagc 47702 Query: 423 tcct 426 |||| Sbjct: 47703 tcct 47706
>gb|AY346458.1| Solanum chacoense MYST-type acetyltransferase mRNA, partial cds Length = 1548 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 528 ggtgttcccactttaccttcctttttagaaagctcataagagaaagcaatcaggaa 583 ||||| |||||||||||||| || || ||||| ||||| ||||| ||||||||||| Sbjct: 1022 ggtgtgcccactttaccttctttctttgaaagttcatatgagaatgcaatcaggaa 967
>dbj|AB012703.1| Daucus carota mRNA for 181, partial cds Length = 1513 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 555 gaaagctcataagagaaagcaatcaggaactttccgtaaccctttct 601 |||||||||||||| || ||||||||||| || || ||||||||||| Sbjct: 969 gaaagctcataagaaaacgcaatcaggaatttcccataaccctttct 923 Score = 40.1 bits (20), Expect = 9.1 Identities = 113/144 (78%) Strand = Plus / Minus Query: 311 gacctttgggtccgcacagatgacgtgctgccctttccggtactggatcaggtccaggct 370 ||||||||| || |||||||| || |||||||| || || ||||| |||| || | ||| Sbjct: 1213 gacctttggatctgcacagataacatgctgcccctttcgatactgaatcaattctaagct 1154 Query: 371 ctgcagtgtgctcaagatgtcgtccgcttttattgccgtcatgtcgctcagctccttaat 430 ||| || ||| ||| || || || || || ||||| ||||| || || || ||||| || Sbjct: 1153 ctgaagggtggtcagaatatcctctgccttgattgctgtcatatcactaagttccttgat 1094 Query: 431 agatatgttgctcttatgcttctt 454 ||||||||| | ||| |||||||| Sbjct: 1093 agatatgttacccttgtgcttctt 1070
>gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, complete sequence Length = 184989 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 tgagaatgcaggccaaattat 639 ||||||||||||||||||||| Sbjct: 165424 tgagaatgcaggccaaattat 165404
>emb|CR723405.2|CNS0GL4J Tetraodon nigroviridis full-length cDNA Length = 1809 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctggatcaggtccaggctctg 373 ||||||||||||||||||||| Sbjct: 604 ctggatcaggtccaggctctg 624
>emb|CR656151.2|CNS0F599 Tetraodon nigroviridis full-length cDNA Length = 1153 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctggatcaggtccaggctctg 373 ||||||||||||||||||||| Sbjct: 611 ctggatcaggtccaggctctg 631
>emb|CR647187.2|CNS0EYC9 Tetraodon nigroviridis full-length cDNA Length = 1815 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctggatcaggtccaggctctg 373 ||||||||||||||||||||| Sbjct: 609 ctggatcaggtccaggctctg 629
>emb|CR641368.2|CNS0ETUM Tetraodon nigroviridis full-length cDNA Length = 1811 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctggatcaggtccaggctctg 373 ||||||||||||||||||||| Sbjct: 606 ctggatcaggtccaggctctg 626
>emb|CR640788.2|CNS0ETEI Tetraodon nigroviridis full-length cDNA Length = 1802 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctggatcaggtccaggctctg 373 ||||||||||||||||||||| Sbjct: 597 ctggatcaggtccaggctctg 617
>emb|CR637401.2|CNS0EQSF Tetraodon nigroviridis full-length cDNA Length = 1819 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctggatcaggtccaggctctg 373 ||||||||||||||||||||| Sbjct: 614 ctggatcaggtccaggctctg 634
>emb|CR634885.2|CNS0EOUJ Tetraodon nigroviridis full-length cDNA Length = 1799 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctggatcaggtccaggctctg 373 ||||||||||||||||||||| Sbjct: 594 ctggatcaggtccaggctctg 614
>emb|Z69734.2|HSU71B4 Human DNA sequence from clone LL0XNC01-71B4 on chromosome X Contains the 3'end of a novel gene and the 5' end of the gene for a novel protein similar to mouse Nik related kinase (Nrk), complete sequence Length = 23606 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 ccactttaccttcctttttag 555 ||||||||||||||||||||| Sbjct: 20900 ccactttaccttcctttttag 20880
>ref|XM_787813.1| PREDICTED: Strongylocentrotus purpuratus similar to CG6121-PA (LOC588112), partial mRNA Length = 263 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 597 tttctttggtatggagggagagtgagaat 625 ||||||||| ||||||| ||||||||||| Sbjct: 71 tttctttggaatggaggtagagtgagaat 43
>ref|NM_140368.1| Drosophila melanogaster CG11253-RA (CG11253), mRNA Length = 1502 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 catggcagatgtgcttagctt 222 ||||||||||||||||||||| Sbjct: 726 catggcagatgtgcttagctt 746
>gb|AC093546.2| Drosophila melanogaster 3L BAC RP98-8G7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 207761 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 catggcagatgtgcttagctt 222 ||||||||||||||||||||| Sbjct: 123902 catggcagatgtgcttagctt 123882
>gb|AC009081.8| Homo sapiens chromosome 16 clone RP11-354I13, complete sequence Length = 166179 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 cccactttaccttccttttta 554 ||||||||||||||||||||| Sbjct: 53338 cccactttaccttccttttta 53318
>gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46 of 83 of the complete sequence Length = 272016 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 catggcagatgtgcttagctt 222 ||||||||||||||||||||| Sbjct: 151836 catggcagatgtgcttagctt 151816
>gb|AC154234.1| Mus musculus BAC clone RP24-345H5 from 16, complete sequence Length = 161505 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 tgagaatgcaggccaaattat 639 ||||||||||||||||||||| Sbjct: 42174 tgagaatgcaggccaaattat 42154
>ref|XM_638718.1| Dictyostelium discoideum hypothetical protein (DDB0167422), partial mRNA Length = 1920 Score = 40.1 bits (20), Expect = 9.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 528 ggtgttcccactttaccttcctttttagaaagctcataagagaa 571 ||||| || |||||||||||||| || || || ||||||||||| Sbjct: 1601 ggtgtgccaactttaccttccttctttgagagttcataagagaa 1558
>ref|XM_428596.1| PREDICTED: Gallus gallus similar to MYST1 protein (LOC431044), partial mRNA Length = 445 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 cagatgacgtgctgccctttccggtact 354 ||||||||||||||||| |||| ||||| Sbjct: 78 cagatgacgtgctgccccttccagtact 51
>gb|AC096551.1| Homo sapiens BAC clone RP11-22K23 from 7, complete sequence Length = 149656 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ttcaaaatttccagaagtac 472 |||||||||||||||||||| Sbjct: 13302 ttcaaaatttccagaagtac 13321
>ref|XM_809128.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510201.50) partial mRNA Length = 10449 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gaaagcttggcaaagagtgc 33 |||||||||||||||||||| Sbjct: 3497 gaaagcttggcaaagagtgc 3478
>ref|XM_813798.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510197.110) partial mRNA Length = 10452 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gaaagcttggcaaagagtgc 33 |||||||||||||||||||| Sbjct: 3494 gaaagcttggcaaagagtgc 3475
>gb|AC122909.2| Mus musculus BAC clone RP23-53K17 from 10, complete sequence Length = 198537 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 ttcttcaaaatttccagaag 469 |||||||||||||||||||| Sbjct: 170437 ttcttcaaaatttccagaag 170418
>emb|CR352209.10| Zebrafish DNA sequence from clone DKEY-150O13 in linkage group 24, complete sequence Length = 143425 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 tttttagaaagctcataaga 568 |||||||||||||||||||| Sbjct: 128218 tttttagaaagctcataaga 128199
>ref|NM_137136.1| Drosophila melanogaster CG12866-RA (CG12866), mRNA Length = 2508 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gacggcaaggagttcctact 148 |||||||||||||||||||| Sbjct: 1783 gacggcaaggagttcctact 1802
>ref|XM_683990.1| PREDICTED: Danio rerio similar to myosin XV (LOC560592), mRNA Length = 11097 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 ttcctcagagtgtttctcct 663 |||||||||||||||||||| Sbjct: 3575 ttcctcagagtgtttctcct 3594
>gb|AC007580.6| Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone BACR07P02, complete sequence Length = 160920 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gacggcaaggagttcctact 148 |||||||||||||||||||| Sbjct: 69488 gacggcaaggagttcctact 69507
>emb|BX649547.7| Zebrafish DNA sequence from clone DKEY-19E10 in linkage group 3, complete sequence Length = 237569 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 ttcctcagagtgtttctcct 663 |||||||||||||||||||| Sbjct: 120353 ttcctcagagtgtttctcct 120372
>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete sequence Length = 87768 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 attggtcagcttatctaatt 185 |||||||||||||||||||| Sbjct: 3826 attggtcagcttatctaatt 3807
>gb|BT022882.1| Drosophila melanogaster IP12936 full insert cDNA Length = 2825 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gacggcaaggagttcctact 148 |||||||||||||||||||| Sbjct: 1808 gacggcaaggagttcctact 1827
>gb|BT022871.1| Drosophila melanogaster IP12836 full insert cDNA Length = 2831 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gacggcaaggagttcctact 148 |||||||||||||||||||| Sbjct: 1808 gacggcaaggagttcctact 1827
>gb|BT022849.1| Drosophila melanogaster IP13036 full insert cDNA Length = 2827 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gacggcaaggagttcctact 148 |||||||||||||||||||| Sbjct: 1811 gacggcaaggagttcctact 1830
>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence Length = 413138 Score = 40.1 bits (20), Expect = 9.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 528 ggtgttcccactttaccttcctttttagaaagctcataagagaa 571 ||||| || |||||||||||||| || || || ||||||||||| Sbjct: 165438 ggtgtgccaactttaccttccttctttgagagttcataagagaa 165395
>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete sequence Length = 266851 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gacggcaaggagttcctact 148 |||||||||||||||||||| Sbjct: 39500 gacggcaaggagttcctact 39519 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,125,554 Number of Sequences: 3902068 Number of extensions: 5125554 Number of successful extensions: 92599 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92481 Number of HSP's gapped (non-prelim): 117 length of query: 667 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 644 effective length of database: 17,143,297,704 effective search space: 11040283721376 effective search space used: 11040283721376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)