ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags17f18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 134 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 193 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 194 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 253 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 254 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 313 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 314 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 373 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 374 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 433 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 434 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 493 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 494 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 553 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 554 atcccagccat 564 ||||| ||||| Sbjct: 114 atcccggccat 104
>dbj|AK061882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F01, full insert sequence Length = 815 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 134 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 193 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 194 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 253 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 254 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 313 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 314 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 373 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 374 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 433 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 434 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 493 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 494 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 553 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 554 atcccagccat 564 ||||| ||||| Sbjct: 114 atcccggccat 104
>dbj|AK120339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060M10, full insert sequence Length = 823 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 134 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 193 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 537 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 478 Query: 194 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 253 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 477 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 418 Query: 254 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 313 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 417 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 358 Query: 314 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 373 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 357 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 298 Query: 374 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 433 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 297 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 238 Query: 434 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 493 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 237 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 178 Query: 494 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 553 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 177 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 118 Query: 554 atcccagccat 564 ||||| ||||| Sbjct: 117 atcccggccat 107
>dbj|AK120022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C04, full insert sequence Length = 1727 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 134 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 193 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 194 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 253 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 254 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 313 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 314 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 373 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 374 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 433 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 434 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 493 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 494 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 553 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 554 atcccagccat 564 ||||| ||||| Sbjct: 114 atcccggccat 104
>gb|AY106376.1| Zea mays PCO106666 mRNA sequence Length = 903 Score = 398 bits (201), Expect = e-108 Identities = 369/425 (86%) Strand = Plus / Minus Query: 140 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 199 ||||||| ||||||||| | ||| || |||||||||||||| ||||| ||||| | ||| Sbjct: 606 ttcttgccacgcagcttcgttcccagggccctctcgagcttgccaatgatctgctggttg 547 Query: 200 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 259 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggaattgccttgcctgactcatactcctggatcacctgtggcttctcattgatcatctga 487 Query: 260 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 319 ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| Sbjct: 486 gcaagctgtgcctgggtcaacttcttatcgagccttgcttgcatgagatttttcttcagg 427 Query: 320 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 379 || |||| ||| |||||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 426 tcacttggaactcgctcatgggcgaggttctctgtgtcgtcgtcgaggcgcttggtgttg 367 Query: 380 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 439 ||||| || ||||| || || ||||||||| | |||||||| ||||||| |||| ||| Sbjct: 366 agggatgtgccgctggacgccgccttgttcataccagcgttgaacttcttcatggtctcg 307 Query: 440 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 499 ||||| |||||||||||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 306 atctccgcgccggagcggcgcgcggcgttgacggccttctcatccttcttggcagcggcg 247 Query: 500 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 559 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 246 gtgggtgccttcttccgcacaaccaccggctcccagtcctgcctgatcggcccgatcccg 187 Query: 560 gccat 564 ||||| Sbjct: 186 gccat 182
>gb|BT018329.1| Zea mays clone EL01T0208G01.c mRNA sequence Length = 700 Score = 391 bits (197), Expect = e-105 Identities = 368/425 (86%) Strand = Plus / Minus Query: 140 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 199 ||||||| ||||||||| | ||| || |||||||||||||| ||||| ||||| | ||| Sbjct: 538 ttcttgccacgcagcttcgttcccagggccctctcgagcttgccaatgatctgctggttg 479 Query: 200 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 259 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 478 ggaattgccttgcctgactcatactcctggatcacctgtggcttctcattgatcatctga 419 Query: 260 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 319 ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| Sbjct: 418 gcaagctgtgcctgggtcaacttcttatcgagccttgcttgcatgagatttttcttcagg 359 Query: 320 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 379 || |||| ||| |||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 358 tcacttggaactcgctcatgggcgaggttctctgtgtcatcgtcgaggcgcttggtgttg 299 Query: 380 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 439 ||||| || ||||| || || ||||||||| | |||||||| |||||||| |||| ||| Sbjct: 298 agggatgtgccgctggacgccgccttgttcataccagcgttgtacttcttcatggtctcg 239 Query: 440 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 499 ||||| |||||||||||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 238 atctccgcgccggagcggcgcgcggcgttgacggccttctcatccttcttggcagcggcg 179 Query: 500 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 559 | | ||| |||||||||| || | ||||||||||||||| |||| ||| || ||||| Sbjct: 178 gtgggtgccttcttccgcacaaccaccggctcccagtcctgtctgatcggcccgatcccg 119 Query: 560 gccat 564 ||||| Sbjct: 118 gccat 114
>gb|BT016361.1| Zea mays clone Contig194 mRNA sequence Length = 770 Score = 335 bits (169), Expect = 1e-88 Identities = 361/425 (84%) Strand = Plus / Minus Query: 140 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 199 ||||||| ||||| ||| | ||| || |||||||||||||| | ||| ||||| | ||| Sbjct: 539 ttcttgccacgcaacttggttcccagggccctctcgagcttgctaatgatctgctggttg 480 Query: 200 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 259 || || |||||||| || || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 479 gggattgccttgcctgattcatactcctgaatcacctgtggcttctcatttatcatctga 420 Query: 260 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 319 |||||||||||||| |||| ||||||||| |||||||||||||| || || |||||||| Sbjct: 419 gcaagttgtgcctgtgtcagcttcttatcgagccttgcttgcatgagattcttcttcaga 360 Query: 320 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 379 || |||| ||| |||||||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 359 tcacttggaactcgctcatgggcgaggttttcggtgtcgtcgtcgaggcgcttggtgttg 300 Query: 380 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 439 ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |||| ||| Sbjct: 299 agggatgtaccgctggatgccgccttgttcgtaccagcgttgtacttcttcatggtatcg 240 Query: 440 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 499 ||||| || |||| |||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 239 atctccgcaccggcgcggcgcgcggcgttgacggccttctcatccttcttggcggcggcg 180 Query: 500 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 559 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 179 gtgggtgccttcttccgcacaacgaccggctcccagtcctgcctgatcggtccgatcccg 120 Query: 560 gccat 564 ||||| Sbjct: 119 gccat 115
>gb|AY103611.1| Zea mays PCO106667 mRNA sequence Length = 964 Score = 335 bits (169), Expect = 1e-88 Identities = 361/425 (84%) Strand = Plus / Minus Query: 140 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 199 ||||||| ||||| ||| | ||| || |||||||||||||| | ||| ||||| | ||| Sbjct: 664 ttcttgccacgcaacttggttcccagggccctctcgagcttgctaatgatctgctggttg 605 Query: 200 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 259 || || |||||||| || || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 604 gggattgccttgcctgattcatactcctgaatcacctgtggcttctcatttatcatctga 545 Query: 260 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 319 |||||||||||||| |||| ||||||||| |||||||||||||| || || |||||||| Sbjct: 544 gcaagttgtgcctgtgtcagcttcttatcgagccttgcttgcatgagattcttcttcaga 485 Query: 320 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 379 || |||| ||| |||||||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 484 tcacttggaactcgctcatgggcgaggttttcggtgtcgtcgtcgaggcgcttggtgttg 425 Query: 380 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 439 ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |||| ||| Sbjct: 424 agggatgtaccgctggatgccgccttgttcgtaccagcgttgtacttcttcatggtatcg 365 Query: 440 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 499 ||||| || |||| |||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 364 atctccgcaccggcgcggcgcgcggcgttgacggccttctcatccttcttggcggcggcg 305 Query: 500 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 559 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 304 gtgggtgccttcttccgcacaacgaccggctcccagtcctgcctgatcggtccgatcccg 245 Query: 560 gccat 564 ||||| Sbjct: 244 gccat 240
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 147 bits (74), Expect = 6e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 423 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 482 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 16975284 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 16975225 Query: 483 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 542 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 16975224 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 16975165 Query: 543 tgagcggaccaatcccagccat 564 ||| |||||||||||| ||||| Sbjct: 16975164 tgatcggaccaatcccggccat 16975143 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 260 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 319 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 16977492 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 16977433 Query: 320 tcgcttgaaacacgctcat 338 || ||||| |||||||||| Sbjct: 16977432 tcacttgagacacgctcat 16977414 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 134 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 193 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 16977731 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 16977672 Query: 194 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 253 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 16977671 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 16977612 Query: 254 atctg 258 ||||| Sbjct: 16977611 atctg 16977607 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 334 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 393 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 16975770 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 16975711 Query: 394 agatgcagccttgttcgttccagcgttat 422 || || |||||||| ||||||||||||| Sbjct: 16975710 ggacgccgccttgtttgttccagcgttat 16975682
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 147 bits (74), Expect = 6e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 423 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 482 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 10801 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 10742 Query: 483 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 542 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 10741 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 10682 Query: 543 tgagcggaccaatcccagccat 564 ||| |||||||||||| ||||| Sbjct: 10681 tgatcggaccaatcccggccat 10660 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 260 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 319 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 13009 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 12950 Query: 320 tcgcttgaaacacgctcat 338 || ||||| |||||||||| Sbjct: 12949 tcacttgagacacgctcat 12931 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 134 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 193 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 13248 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 13189 Query: 194 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 253 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 13188 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 13129 Query: 254 atctg 258 ||||| Sbjct: 13128 atctg 13124 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 334 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 393 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 11287 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 11228 Query: 394 agatgcagccttgttcgttccagcgttat 422 || || |||||||| ||||||||||||| Sbjct: 11227 ggacgccgccttgtttgttccagcgttat 11199
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 147 bits (74), Expect = 6e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 423 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 482 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 122295 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 122236 Query: 483 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 542 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 122235 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 122176 Query: 543 tgagcggaccaatcccagccat 564 ||| |||||||||||| ||||| Sbjct: 122175 tgatcggaccaatcccggccat 122154 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 260 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 319 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 124503 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 124444 Query: 320 tcgcttgaaacacgctcat 338 || ||||| |||||||||| Sbjct: 124443 tcacttgagacacgctcat 124425 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 196 gttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcat 255 ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124680 gttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatcat 124621 Query: 256 ctg 258 ||| Sbjct: 124620 ctg 124618 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 334 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 393 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 122781 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 122722 Query: 394 agatgcagccttgttcgttccagcgttat 422 || || |||||||| ||||||||||||| Sbjct: 122721 ggacgccgccttgtttgttccagcgttat 122693
>gb|AY084597.1| Arabidopsis thaliana clone 112835 mRNA, complete sequence Length = 726 Score = 89.7 bits (45), Expect = 1e-14 Identities = 222/281 (79%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 197 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 256 |||||||| || || ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttccccgactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 257 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 316 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 317 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 376 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 377 ttgagggaagttccgctagatgcagccttgttcgttccagc 417 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence Length = 110572 Score = 87.7 bits (44), Expect = 5e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 212 cccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgtgcc 271 ||||||||||||||||||||||| || ||||||||| |||| || ||||||||||||||| Sbjct: 37003 cccgactcgtactcctggatcacttgaggcttctcactgataatttgagcaagttgtgcc 36944 Query: 272 tgggtcatcttcttatccagccttgcttgcat 303 || || | |||||| |||| ||| | |||||| Sbjct: 36943 tgagtaagcttcttgtccatcctagtttgcat 36912
>ref|NM_115730.2| Arabidopsis thaliana DNA binding / transcription coactivator AT3G58680 mRNA, complete cds Length = 799 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 197 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 256 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 257 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 316 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 317 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 376 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 377 ttgagggaagttccgctagatgcagccttgttcgttccagc 417 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AF339728.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 479 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 428 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 369 Query: 197 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 256 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 368 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 309 Query: 257 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 316 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 308 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 249 Query: 317 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 376 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 248 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 189 Query: 377 ttgagggaagttccgctagatgcagccttgttcgttccagc 417 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 188 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 148
>gb|AF326909.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 741 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 197 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 256 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 257 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 316 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 317 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 376 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 377 ttgagggaagttccgctagatgcagccttgttcgttccagc 417 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AY081487.1| Arabidopsis thaliana transcriptional coactivator-like protein (At3g58680) mRNA, complete cds Length = 607 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 428 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 369 Query: 197 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 256 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 368 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 309 Query: 257 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 316 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 308 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 249 Query: 317 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 376 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 248 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 189 Query: 377 ttgagggaagttccgctagatgcagccttgttcgttccagc 417 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 188 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 148
>gb|AY042850.1| Arabidopsis thaliana transcriptional coactivator-like protein (T20N10_30) mRNA, complete cds Length = 724 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 197 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 256 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 257 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 316 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 317 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 376 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 377 ttgagggaagttccgctagatgcagccttgttcgttccagc 417 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AF324717.2|AF324717 Arabidopsis thaliana AT3g58680 (AT3g58680/T20N10_30) mRNA, complete cds Length = 779 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 573 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 514 Query: 197 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 256 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 513 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 454 Query: 257 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 316 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 453 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 394 Query: 317 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 376 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 393 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 334 Query: 377 ttgagggaagttccgctagatgcagccttgttcgttccagc 417 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 333 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 293
>dbj|AB072698.1| Nicotiana tabacum NtMBF1a mRNA for putative multiprotein bridging factor 1, complete cds Length = 703 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 200 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 259 ||||||||||| || ||||| ||||||||||| | || ||||||||||| |||| ||| Sbjct: 423 ggaatcgcctttccagactcatactcctggatgatttgaggcttctcatttatcaactgg 364 Query: 260 gcaagttgtgcctgggtcatcttcttatc 288 |||||||| |||||||||| ||||||||| Sbjct: 363 gcaagttgagcctgggtcagcttcttatc 335 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 432 tggtgtcgatctcggcgccggagcggcgggcagcgttgacggc 474 |||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 191 tggtttcgatctcagcaccggagcgacgggcggcgttgacggc 149
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 8479 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 8420 Query: 197 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatca 254 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 8419 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatca 8362 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 389 ccgctagatgcagccttgttcgttccagc 417 ||||| |||||||||||||||| |||||| Sbjct: 7831 ccgcttgatgcagccttgttcgatccagc 7803
>ref|NM_129829.2| Arabidopsis thaliana DNA binding / transcription coactivator AT2G42680 mRNA, complete cds Length = 692 Score = 73.8 bits (37), Expect = 7e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 209 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 268 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 425 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 366 Query: 269 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 328 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 365 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 306 Query: 329 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 388 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 305 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 246 Query: 389 ccgctagatgcagccttgttcgttccagc 417 ||||| ||||| |||||||| |||||||| Sbjct: 245 ccgcttgatgccgccttgttggttccagc 217
>gb|AY063014.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 460 Score = 73.8 bits (37), Expect = 7e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 209 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 268 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 356 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 297 Query: 269 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 328 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 296 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 237 Query: 329 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 388 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 236 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 177 Query: 389 ccgctagatgcagccttgttcgttccagc 417 ||||| ||||| |||||||| |||||||| Sbjct: 176 ccgcttgatgccgccttgttggttccagc 148
>gb|AF370280.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 703 Score = 73.8 bits (37), Expect = 7e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 209 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 268 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 420 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 361 Query: 269 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 328 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 360 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 301 Query: 329 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 388 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 300 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 241 Query: 389 ccgctagatgcagccttgttcgttccagc 417 ||||| ||||| |||||||| |||||||| Sbjct: 240 ccgcttgatgccgccttgttggttccagc 212
>emb|BX819434.1|CNS0A8ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 73.8 bits (37), Expect = 7e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 209 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 268 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 411 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 352 Query: 269 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 328 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 351 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 292 Query: 329 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 388 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 291 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgtttagagatgtg 232 Query: 389 ccgctagatgcagccttgttcgttccagc 417 ||||| ||||| |||||||| |||||||| Sbjct: 231 ccgcttgatgccgccttgttggttccagc 203
>gb|AY088140.1| Arabidopsis thaliana clone 41712 mRNA, complete sequence Length = 675 Score = 73.8 bits (37), Expect = 7e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 209 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 268 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 425 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 366 Query: 269 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 328 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 365 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 306 Query: 329 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 388 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 305 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 246 Query: 389 ccgctagatgcagccttgttcgttccagc 417 ||||| ||||| |||||||| |||||||| Sbjct: 245 ccgcttgatgccgccttgttggttccagc 217
>gb|AF232062.1|AF232062 Solanum tuberosum multiprotein bridging factor 1 mRNA, complete cds Length = 626 Score = 73.8 bits (37), Expect = 7e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 185 attatctgattgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttc 244 |||||||| | ||| ||||| ||||| ||||||||||| || ||||| | |||||||||| Sbjct: 394 attatctgttggtttggaattgcctttcccgactcgtattcttggataatctgtggcttc 335 Query: 245 tcattgatcatctgagcaagttgtgcctgggtcatcttctt 285 ||||| |||| ||||||||||| | ||| |||| |||||| Sbjct: 334 tcatttatcaattgagcaagttgagactgagtcagcttctt 294 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 437 tcgatctcggcgccggagcggcgggcagcgttgacggc 474 |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 142 tcgatctcggcgccggagcgacgggcggcgttaacggc 105
>emb|BX826065.1|CNS0A4ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 671 Score = 61.9 bits (31), Expect = 3e-06 Identities = 98/119 (82%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 137 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 196 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 496 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 437 Query: 197 ttcggaatcgccttgccc-gactcgtactcctggatcacctgtggcttctcattgatca 254 |||||||| || || | | |||||||| || |||||||| ||||||||||||||||||| Sbjct: 436 ttcggaattgctttccacagactcgtattcttggatcacttgtggcttctcattgatca 378 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 389 ccgctagatgcagccttgttcgttccagc 417 ||||| |||||||||||||||| |||||| Sbjct: 242 ccgcttgatgcagccttgttcgatccagc 214
>emb|Z49698.1|RCJS21MR R.communis mRNA (unknown) Length = 674 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 221 tactcctggatcacctgtggcttctcattgatcatctgagcaagttgtgcctgggt 276 ||||| ||||| | ||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 390 tactcttggattatctggggcttttcattgatcatctgagcaagctgagcctgggt 335 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 437 tcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttctt 489 ||||||||||| || | ||| || |||||||||||| |||| ||||||||||| Sbjct: 174 tcgatctcggcaccagcgcgacgagcagcgttgacgaccttctcgtccttctt 122
>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete sequence Length = 96685 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 209 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatct 257 ||||| ||||| ||||| || ||||| ||||||||||||||||| |||| Sbjct: 9784 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatct 9832
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete sequence Length = 115310 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 209 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatct 257 ||||| ||||| ||||| || ||||| ||||||||||||||||| |||| Sbjct: 105703 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatct 105751
>gb|BC015500.1| Homo sapiens endothelial differentiation-related factor 1, transcript variant alpha, mRNA (cDNA clone MGC:9058 IMAGE:3903539), complete cds Length = 658 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>ref|NM_153200.1| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant beta, mRNA Length = 538 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>ref|NM_003792.2| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant alpha, mRNA Length = 658 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 141458 gatcacctgtggcttctcattgat 141481
>gb|BT009863.1| Homo sapiens endothelial differentiation-related factor 1 mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>emb|CR541914.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0633D for gene EDF1, endothelial differentiation-related factor 1; complete cds, without stopcodon Length = 444 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>emb|AJ005259.1|HSAJ5259 Homo sapiens mRNA for EDF-1 protein Length = 981 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 352 gatcacctgtggcttctcattgat 329
>gb|AY888864.1| Synthetic construct Homo sapiens clone FLH109977.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>gb|AY888863.1| Synthetic construct Homo sapiens clone FLH109976.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>gb|AY888862.1| Synthetic construct Homo sapiens clone FLH109972.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>dbj|AB002283.2| Homo sapiens mRNA for hMBF1beta, complete cds Length = 538 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 355 gatcacctgtggcttctcattgat 332
>gb|AY893963.1| Synthetic construct Homo sapiens clone FLH130861.01L endothelial differentiation-related factor 1 (EDF1) mRNA, partial cds Length = 447 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>dbj|AB002282.1| Homo sapiens mRNA for hMBF1alpha, complete cds Length = 636 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 229 gatcacctgtggcttctcattgat 252 |||||||||||||||||||||||| Sbjct: 355 gatcacctgtggcttctcattgat 332
>gb|AY509992.1| Malus x domestica cultivar Royal Gala sucrose phosphate phosphatase mRNA, complete cds Length = 1631 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 gggaaaggttctcagtgtcgt 359 ||||||||||||||||||||| Sbjct: 222 gggaaaggttctcagtgtcgt 202
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 ttggtggtgtcgatctcggcg 448 ||||||||||||||||||||| Sbjct: 188873 ttggtggtgtcgatctcggcg 188853
>gb|AE008743.2| Salmonella typhimurium LT2, section 49 of 220 of the complete genome Length = 62027 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 cttggtggtgtcgatctcggcgccg 451 ||||||||||||| ||||||||||| Sbjct: 2350 cttggtggtgtcgctctcggcgccg 2374
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 cttggtggtgtcgatctcggcgccg 451 ||||||||||||| ||||||||||| Sbjct: 238677 cttggtggtgtcgctctcggcgccg 238701
>gb|AC084072.13| Mus musculus strain 129S6/SvEvTac clone rp22-511i2, complete sequence Length = 114579 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 551 ccaatcccagccatatctccctgat 575 |||| |||||||||||||||||||| Sbjct: 56969 ccaaacccagccatatctccctgat 56945
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 ctcggcgccggagcggcgggc 462 ||||||||||||||||||||| Sbjct: 874563 ctcggcgccggagcggcgggc 874543
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 cttggtggtgtcgatctcggcgccg 451 ||||||||||||| ||||||||||| Sbjct: 1865324 cttggtggtgtcgctctcggcgccg 1865300
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 cttggtggtgtcgatctcggcgccg 451 ||||||||||||| ||||||||||| Sbjct: 1983400 cttggtggtgtcgctctcggcgccg 1983376
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 cttggtggtgtcgatctcggcgccg 451 ||||||||||||| ||||||||||| Sbjct: 1072430 cttggtggtgtcgctctcggcgccg 1072454
>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete sequence Length = 246587 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 551 ccaatcccagccatatctccctgat 575 |||| |||||||||||||||||||| Sbjct: 22605 ccaaacccagccatatctccctgat 22581
>ref|XM_365829.1| Magnaporthe grisea 70-15 hypothetical protein (MG10049.4) partial mRNA Length = 654 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 ctcggcgccggagcggcggg 461 |||||||||||||||||||| Sbjct: 376 ctcggcgccggagcggcggg 395
>ref|XM_878913.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 3 (LOC532674), mRNA Length = 5573 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gctcccagtcctgcctgagc 547 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>ref|XM_611824.2| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 1 (LOC532674), mRNA Length = 5390 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gctcccagtcctgcctgagc 547 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>ref|XM_866654.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 2 (LOC532674), mRNA Length = 5453 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gctcccagtcctgcctgagc 547 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence Length = 195911 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 660 gagagagaggggagatattt 679 |||||||||||||||||||| Sbjct: 48438 gagagagaggggagatattt 48419
>emb|Z32679.1|CEC05B5 Caenorhabditis elegans Cosmid C05B5, complete sequence Length = 30320 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 attcagtatcaaccaacaggaacagcct 83 ||||||||||| |||||| ||||||||| Sbjct: 16368 attcagtatcagccaacatgaacagcct 16395
>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence Length = 150332 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 cttgcataaggtttttcttc 316 |||||||||||||||||||| Sbjct: 126454 cttgcataaggtttttcttc 126435
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 cgcaccactatcggctccca 534 |||||||||||||||||||| Sbjct: 1007050 cgcaccactatcggctccca 1007031
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 tggtggtgtcgatctcggcg 448 |||||||||||||||||||| Sbjct: 136957 tggtggtgtcgatctcggcg 136976
>gb|AC133540.2| Homo sapiens chromosome 16 clone LA16c-352F7, complete sequence Length = 40695 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cttgcataaggtttttcttc 316 |||||||||||||||||||| Sbjct: 2479 cttgcataaggtttttcttc 2498
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence Length = 186963 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 agccgcttggtgttgaggga 384 |||||||||||||||||||| Sbjct: 44273 agccgcttggtgttgaggga 44292
>gb|DQ397548.1| Cenarchaeum symbiosum clone C04G08, complete sequence Length = 46706 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gtatcaaccaacaggaacag 80 |||||||||||||||||||| Sbjct: 45414 gtatcaaccaacaggaacag 45395
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 cttgcataaggtttttcttc 316 |||||||||||||||||||| Sbjct: 8402 cttgcataaggtttttcttc 8383
>gb|AC024094.28| Homo sapiens 4 RP11-193M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161973 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 651 caggcgctagagagagaggggaga 674 ||||| |||||||||||||||||| Sbjct: 20149 caggcactagagagagaggggaga 20172
>ref|NM_001025972.1| Caenorhabditis elegans C05B5.9 (C05B5.9) mRNA, complete cds Length = 598 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 attcagtatcaaccaacaggaacagcct 83 ||||||||||| |||||| ||||||||| Sbjct: 242 attcagtatcagccaacatgaacagcct 269
>emb|AL929242.16| Mouse DNA sequence from clone RP23-78D16 on chromosome 2, complete sequence Length = 217352 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catggttattcagtatcaac 68 |||||||||||||||||||| Sbjct: 135410 catggttattcagtatcaac 135391
>gb|AC147874.3| Monodelphis domestica clone VMRC6-639B11, complete sequence Length = 132290 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 663 agagaggggagatattttgg 682 |||||||||||||||||||| Sbjct: 3894 agagaggggagatattttgg 3875
>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4, cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ), MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY (mmcY) genes, complete cds; and unknown genes Length = 63734 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 tcggcgccggagcggcgggcagcg 466 |||||||||||| ||||||||||| Sbjct: 7251 tcggcgccggaggggcgggcagcg 7228
>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225736 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 661 agagagaggggagatatttt 680 |||||||||||||||||||| Sbjct: 13152 agagagaggggagatatttt 13133
>gb|L05438.1|MUSIGFBP03 Mouse insulin-like growth factor binding protein 2 (IGFBP-2) gene, exon 3 Length = 425 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 agccgcttggtgttgaggga 384 |||||||||||||||||||| Sbjct: 121 agccgcttggtgttgaggga 140
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 663 agagaggggagatattttgg 682 |||||||||||||||||||| Sbjct: 1048426 agagaggggagatattttgg 1048407 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,136,103 Number of Sequences: 3902068 Number of extensions: 5136103 Number of successful extensions: 96398 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95922 Number of HSP's gapped (non-prelim): 468 length of query: 698 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 675 effective length of database: 17,143,297,704 effective search space: 11571725950200 effective search space used: 11571725950200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
