| Clone Name | rbags17f13 |
|---|---|
| Clone Library Name | barley_pub |
>FEM3_CAERE (Q8I8W7) Sex-determination protein fem-3 (Cr-FEM-3)| Length = 439 Score = 33.1 bits (74), Expect = 0.68 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 493 DWEGIHIVKHHTYKQVKWYAEEIHDSASRLLXGY 594 DW G+ I+ YK ++W+ EE +D + +L Y Sbjct: 313 DWFGVLIMNQIAYKTIRWHEEEYNDGSFPVLDSY 346
>EFP_RHIME (Q92ST6) Elongation factor P (EF-P)| Length = 189 Score = 33.1 bits (74), Expect = 0.68 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = +1 Query: 397 LSCSVKVGHKHQPPLQNCRDEEENRTHAEHDSDWEGIHIVKHHTYKQVKWYAEEIHDSAS 576 +S VKV +++ Q R E+R H D EG H + TY Q+ +E+I D + Sbjct: 46 ISDGVKVSERYRTTEQVERAFVEDREHTFLYEDGEGFHFMNPETYDQLVMSSEDIGDLKA 105 Query: 577 RLLXG 591 L G Sbjct: 106 YLQEG 110
>BRO1_CANAL (Q5AJC1) Vacuolar protein-sorting protein BRO1 (BRO| domain-containing protein 1) Length = 945 Score = 30.4 bits (67), Expect = 4.4 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = +1 Query: 442 QNCRDEEENRTHAEHDSDWEGIHIVKHHTYKQVKWYAEEIHDSASR 579 ++ D + AE DS W I K+ YK + +Y +H A+R Sbjct: 268 EDTEDSDNRYVAAELDSSWISIIYFKYEYYKSLAYYFNGLHLDANR 313
>EFP2_RHILO (Q983M5) Elongation factor P 2 (EF-P 2)| Length = 189 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = +1 Query: 409 VKVGHKHQPPLQNCRDEEENRTHAEHDSDWEGIHIVKHHTYKQVKWYAEEIHDSASRLLX 588 VKV +++ Q R E R H +D EG H + TY QV + D+A L Sbjct: 50 VKVSERYRTTEQVERAYVEEREHTFLYADGEGFHFMNPETYDQVAVSEAVVGDAAPYLQE 109 Query: 589 G 591 G Sbjct: 110 G 110
>SYM_NITEU (Q82WP0) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 706 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = +1 Query: 469 RTHAEHDSDWEGIHIVKHHTYK----QVKWYAEEIH 564 R HAEH D+ G HI Y + ++YAE+I+ Sbjct: 74 RVHAEHLRDFTGFHIAFDQYYSTHSDETRYYAEDIY 109
>FZD9_MOUSE (Q9R216) Frizzled 9 precursor (Frizzled-9) (Fz-9) (mFz9) (mFz3)| Length = 592 Score = 29.3 bits (64), Expect = 9.9 Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 10/97 (10%) Frame = +3 Query: 270 RLIQQPCRQADEVG---DCSMPGSRQ-----WPLVCFKGLVAHXXXXXXXXXXXCEGRTQ 425 R +QPC A G DCS+PG + L F LV +T Sbjct: 480 RATEQPCTAATVPGGRRDCSLPGGSVPTVAVFMLKIFMSLVVGITSGVWVWSSKTF-QTW 538 Query: 426 TSAASAKLPR*RGK*NTCRT*QRLGRHSHC--KAPHI 530 S K+ R + CRT GR +HC KAP + Sbjct: 539 QSLCYRKMAAGRARAKACRTPGGYGRGTHCHYKAPTV 575 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,671,161 Number of Sequences: 219361 Number of extensions: 1940300 Number of successful extensions: 4240 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4239 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)