>dbj|AB011443.1| Triticum aestivum WESR2 mRNA, partial sequence
          Length = 760

 Score =  115 bits (58), Expect = 2e-23
 Identities = 64/66 (96%)
 Strand = Plus / Minus

                                                                       
Query: 3   cctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaaccaactc 62
           |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 558 cctgtacataataaacacaggtagagccagcaaagcagaagccaggaaccaaaccaactc 499

                 
Query: 63  cttagt 68
           ||||||
Sbjct: 498 cttagt 493

>gb|BT017482.1| Zea mays clone EL01N0412B11.c mRNA sequence
          Length = 1016

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 3   cctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaaccaactc 62
           |||||| ||||| || ||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 584 cctgtatataatgaagacaggcagagccagcaaagcagaagccaggaaccaaactaactc 525

                 
Query: 63  cttagt 68
           ||||||
Sbjct: 524 cttagt 519

>gb|AY107973.1| Zea mays PCO099381 mRNA sequence
          Length = 935

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 3   cctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaaccaactc 62
           |||||| ||||| || ||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 488 cctgtatataatgaagacaggcagagccagcaaagcagaagccaggaaccaaactaactc 429

                 
Query: 63  cttagt 68
           ||||||
Sbjct: 428 cttagt 423

>ref|XM_483357.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1922

 Score = 69.9 bits (35), Expect = 9e-10
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                        
Query: 3    cctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaaccaactc 62
            |||||| |||||| | ||||| |  |||||||||||||| ||||||||||||||||||||
Sbjct: 1449 cctgtatataatatagacagggatagccagcaaagcagaagccaggaaccaaaccaactc 1390

               
Query: 63   ctt 65
            |||
Sbjct: 1389 ctt 1387

>dbj|AB118016.1| Oryza sativa (japonica cultivar-group) bip129 mRNA for BRI1-KD
           interacting protein 129, partial cds
          Length = 522

 Score = 69.9 bits (35), Expect = 9e-10
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 3   cctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaaccaactc 62
           |||||| |||||| | ||||| |  |||||||||||||| ||||||||||||||||||||
Sbjct: 148 cctgtatataatatagacagggatagccagcaaagcagaagccaggaaccaaaccaactc 89

              
Query: 63  ctt 65
           |||
Sbjct: 88  ctt 86

>dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N10, full
            insert sequence
          Length = 1922

 Score = 69.9 bits (35), Expect = 9e-10
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                        
Query: 3    cctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaaccaactc 62
            |||||| |||||| | ||||| |  |||||||||||||| ||||||||||||||||||||
Sbjct: 1448 cctgtatataatatagacagggatagccagcaaagcagaagccaggaaccaaaccaactc 1389

               
Query: 63   ctt 65
            |||
Sbjct: 1388 ctt 1386

>gb|AY224462.1| Oryza sativa (japonica cultivar-group) isolate 23522 unknown mRNA
          Length = 960

 Score = 63.9 bits (32), Expect = 6e-08
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                       
Query: 3   cctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaaccaactc 62
           |||||| |||||| | ||||| |  |||||||||||||| ||||||||||||||||||||
Sbjct: 861 cctgtatataatatagacagggatagccagcaaagcagaagccaggaaccaaaccaactc 802

>gb|AY596608.1| Saccharum officinarum clone SCCCRZ1001G11, complete sequence
          Length = 1735

 Score = 61.9 bits (31), Expect = 2e-07
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   cctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaaccaactc 62
           |||||| ||||| || ||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 517 cctgtatataatgaagacaggcagagctagcaaagcagaagccaggaaccaaactaactc 576

              
Query: 63  ctt 65
           |||
Sbjct: 577 ctt 579

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.053
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 44       ccaggaaccaaaccaactcctt 65
                ||||||||||||||||||||||
Sbjct: 25792720 ccaggaaccaaaccaactcctt 25792741

>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0689E12
          Length = 147516

 Score = 44.1 bits (22), Expect = 0.053
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 44    ccaggaaccaaaccaactcctt 65
             ||||||||||||||||||||||
Sbjct: 64931 ccaggaaccaaaccaactcctt 64952

>emb|AL359836.16| Human DNA sequence from clone RP11-389E6 on chromosome 10 Contains the
             5' end of gene LOC118987 and a CpG island, complete
             sequence
          Length = 49052

 Score = 42.1 bits (21), Expect = 0.21
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    aagcagaggccaggaaccaaa 55
             |||||||||||||||||||||
Sbjct: 32197 aagcagaggccaggaaccaaa 32177

>gb|AC005887.3|AC005887 citb_173_i_12, complete sequence
          Length = 120578

 Score = 42.1 bits (21), Expect = 0.21
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    aagcagaggccaggaaccaaa 55
             |||||||||||||||||||||
Sbjct: 51546 aagcagaggccaggaaccaaa 51566

>gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, complete sequence
          Length = 219414

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    cagcaaagcagaggccagga 49
             ||||||||||||||||||||
Sbjct: 26451 cagcaaagcagaggccagga 26470

>gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, complete sequence
          Length = 172286

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    cagcaaagcagaggccagga 49
             ||||||||||||||||||||
Sbjct: 55075 cagcaaagcagaggccagga 55056

>gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, complete sequence
          Length = 225687

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ctgtacataataaacacagg 23
              ||||||||||||||||||||
Sbjct: 211802 ctgtacataataaacacagg 211783

>ref|NM_122348.2| Arabidopsis thaliana EMB2024; 6-phosphogluconolactonase/ catalytic
            AT5G24400 (EMB2024) mRNA, complete cds
          Length = 1248

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   ccaggaaccaaaccaactc 62
            |||||||||||||||||||
Sbjct: 1005 ccaggaaccaaaccaactc 987

>ref|XM_417921.1| PREDICTED: Gallus gallus similar to probable RNA helicase (EC
            3.6.1.-) RCK - human (LOC419783), mRNA
          Length = 3367

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 28   gccagcaaagcagaggcca 46
            |||||||||||||||||||
Sbjct: 2675 gccagcaaagcagaggcca 2657

>ref|XM_783991.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC584112 (LOC584112), partial mRNA
          Length = 795

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  gcagaggccaggaaccaaa 55
           |||||||||||||||||||
Sbjct: 358 gcagaggccaggaaccaaa 376

>gb|AF370305.1| Arabidopsis thaliana At5g24400 mRNA sequence
          Length = 1195

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 44  ccaggaaccaaaccaactc 62
           |||||||||||||||||||
Sbjct: 937 ccaggaaccaaaccaactc 919

>emb|CR847543.13| Zebrafish DNA sequence from clone DKEY-183P4 in linkage group 8, complete
              sequence
          Length = 207382

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      ctgtacataataaacacag 22
              |||||||||||||||||||
Sbjct: 137821 ctgtacataataaacacag 137839

>gb|AC154038.1| Mus musculus 6 BAC RP23-49L8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 213878

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    gcaaagcagaggccaggaa 50
             |||||||||||||||||||
Sbjct: 73372 gcaaagcagaggccaggaa 73354

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 41       aggccaggaaccaaaccaa 59
                |||||||||||||||||||
Sbjct: 22202090 aggccaggaaccaaaccaa 22202072

>emb|BX832117.1|CNS0A166 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH52ZF11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1089

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 44  ccaggaaccaaaccaactc 62
           |||||||||||||||||||
Sbjct: 936 ccaggaaccaaaccaactc 918

>emb|BX833820.1|CNS0A0L5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZA10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1116

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 44  ccaggaaccaaaccaactc 62
           |||||||||||||||||||
Sbjct: 929 ccaggaaccaaaccaactc 911

>gb|AY086161.1| Arabidopsis thaliana clone 21890 mRNA, complete sequence
          Length = 1250

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   ccaggaaccaaaccaactc 62
            |||||||||||||||||||
Sbjct: 1006 ccaggaaccaaaccaactc 988

>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0567H04
          Length = 181420

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 41   aggccaggaaccaaaccaa 59
            |||||||||||||||||||
Sbjct: 7336 aggccaggaaccaaaccaa 7318

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 38      cagaggccaggaaccaaac 56
               |||||||||||||||||||
Sbjct: 5811942 cagaggccaggaaccaaac 5811960

>dbj|AB016884.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16H17
          Length = 45529

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    ccaggaaccaaaccaactc 62
             |||||||||||||||||||
Sbjct: 33928 ccaggaaccaaaccaactc 33946

>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence
          Length = 189949

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    caaagcagaggccaggaac 51
             |||||||||||||||||||
Sbjct: 89625 caaagcagaggccaggaac 89607

>gb|BT001923.1| Arabidopsis thaliana clone C105102 putative
           6-phosphogluconolactonase (At5g24400) mRNA, complete cds
          Length = 1009

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 44  ccaggaaccaaaccaactc 62
           |||||||||||||||||||
Sbjct: 952 ccaggaaccaaaccaactc 934


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 772,232
Number of Sequences: 3902068
Number of extensions: 772232
Number of successful extensions: 47379
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47320
Number of HSP's gapped (non-prelim): 59
length of query: 80
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 59
effective length of database: 17,151,101,840
effective search space: 1011915008560
effective search space used: 1011915008560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)