ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17e24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472581.1| Oryza sativa (japonica cultivar-group), predic... 182 9e-43
2gb|AY739308.1| Oryza sativa (japonica cultivar-group) protein di... 182 9e-43
3dbj|AK101074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
4ref|XM_466195.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
5dbj|AK073161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
6dbj|AK072252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
8emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4,... 84 6e-13
9gb|U41385.1|RCU41385 Ricinus communis protein disulphide isomera... 58 4e-05
10emb|AJ277379.1|TTU277379 Triticum turgidum subsp. durum mRNA for... 52 0.002
11gb|AF262981.1|AF262981 Triticum aestivum protein disulfide isome... 52 0.002
12gb|AF262979.1|AF262979 Triticum aestivum protein disulfide isome... 52 0.002
13emb|AJ868107.1| Triticum aestivum subsp. aestivum mRNA for prote... 52 0.002
14emb|AJ868105.1| Triticum aestivum subsp. aestivum mRNA for prote... 52 0.002
15gb|AC156283.6| Mus musculus 6 BAC RP24-327I4 (Roswell Park Cance... 44 0.55
16gb|U11496.1|TAU11496 Triticum aestivum Chinese spring protein di... 44 0.55
17gb|AC113176.8| Mus musculus chromosome 3, clone RP23-453A2, comp... 42 2.2
18emb|CR661866.2|CNS0F9O0 Tetraodon nigroviridis full-length cDNA 42 2.2
19gb|AC159969.4| Mus musculus chromosome 3, clone RP23-301F20, com... 42 2.2
20gb|BT000107.1| Arabidopsis thaliana dihydroxyacetone kinase, put... 42 2.2
21gb|AY128381.1| Arabidopsis thaliana dihydroxyacetone kinase, put... 42 2.2
22gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complet... 42 2.2
23gb|AC123886.7| Homo sapiens BAC clone RP11-404O21 from 2, comple... 42 2.2
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
26gb|AC112246.4| Homo sapiens BAC clone RP11-606M12 from 2, comple... 42 2.2
27gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, comple... 42 2.2
28gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complet... 42 2.2
29dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
30gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC F11A1... 42 2.2
31gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana... 42 2.2
32dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
33dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
34dbj|AK068268.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
35dbj|AK059538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
36gb|AC153080.4| Colobus guereza clone CH272-279A15, complete sequ... 40 8.5
37gb|AY648855.1| Branchiostoma belcheri tsingtaunese mitochondrial... 40 8.5
38gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chrom... 40 8.5
39gb|AC073054.2| Homo sapiens BAC clone RP11-106F1 from 7, complet... 40 8.5
40emb|CR626904.15| Zebrafish DNA sequence from clone DKEY-53D10 in... 40 8.5
41emb|CR762431.9| Zebrafish DNA sequence from clone DKEY-220O10 in... 40 8.5
42gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, comple... 40 8.5
43gb|AC010095.6| Homo sapiens BAC clone RP11-348G16 from 2, comple... 40 8.5
44gb|AC009963.11| Homo sapiens BAC clone RP11-368F12 from 2, compl... 40 8.5
45gb|AC114755.4| Homo sapiens BAC clone RP11-274P16 from 2, comple... 40 8.5
46gb|AC073415.6| Homo sapiens BAC clone RP11-84C2 from 2, complete... 40 8.5
47gb|AC013464.6| Homo sapiens BAC clone RP11-337D5 from UL, comple... 40 8.5
48gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, comple... 40 8.5
49gb|AC131187.4| Mus musculus BAC clone RP24-250M7 from 13, comple... 40 8.5
50emb|AL592042.9| Mouse DNA sequence from clone RP23-380K13 on chr... 40 8.5 
>ref|XM_472581.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1554

 Score =  182 bits (92), Expect = 9e-43
 Identities = 267/322 (82%), Gaps = 5/322 (1%)
 Strand = Plus / Minus

                                                                        
Query: 302  gctgcagcagctttggcccccctgttctttttgataaaactgatgatctcatcagctttc 361
            |||||| ||||||| |  ||||||||||  |||||||||||||||||||| |||||| ||
Sbjct: 1469 gctgcaccagctttcggtcccctgttctcgttgataaaactgatgatctcctcagctgtc 1410

                                                                        
Query: 362  ctcggaccgtcatataacaagagattccctccactagaagaatagaagtacagcgctggg 421
            || | |||||| ||  |||| || |||||   ||| || ||||||||||| |  | ||| 
Sbjct: 1409 cttgcaccgtcgtacgacaaaaggttccc---acttgatgaatagaagtagatagttgga 1353

                                                                        
Query: 422  tatccctcgaccgagaagtctgtcgggatatcgttcgcagtcccatccatcttcgctatg 481
            |||||||| |||| ||||||||| || ||||||||| |||| ||||||||||| ||||| 
Sbjct: 1352 tatccctcaaccgtgaagtctgttggtatatcgttcacagttccatccatctttgctatc 1293

                                                                        
Query: 482  actacatctttgtcatcttgcaacaagaccgcaacttcctccaaaatcggggccaacttc 541
            |||| ||||| ||||||||||||  | || |||| ||||||||  ||| |||| ||||| 
Sbjct: 1292 actatatcttggtcatcttgcaatgacactgcaatttcctccaggatcagggcaaacttg 1233

                                                                        
Query: 542  cggcaatgaccgcacccagggtgcatagaacttcgagtagaacatttttgccagagttga 601
            |||||||| || || ||| |||||||||||| || || | ||||||||||||||||||||
Sbjct: 1232 cggcaatggccaca-ccaaggtgcatagaac-tcaagcaaaacatttttgccagagttga 1175

                                  
Query: 602  aaacaatttcatcaatattgtc 623
            ||||||| ||||| ||||||||
Sbjct: 1174 aaacaatgtcatctatattgtc 1153



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 257  gatgatgttacctcctcttctacatcatccatctg 291
            |||||||||||||||||||| ||| |||| |||||
Sbjct: 1526 gatgatgttacctcctcttccacagcatcaatctg 1492
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>gb|AY739308.1| Oryza sativa (japonica cultivar-group) protein disulfide
            isomerase-like (PDIL1-2) mRNA, complete cds
          Length = 1874

 Score =  182 bits (92), Expect = 9e-43
 Identities = 267/322 (82%), Gaps = 5/322 (1%)
 Strand = Plus / Minus

                                                                        
Query: 302  gctgcagcagctttggcccccctgttctttttgataaaactgatgatctcatcagctttc 361
            |||||| ||||||| |  ||||||||||  |||||||||||||||||||| |||||| ||
Sbjct: 1509 gctgcaccagctttcggtcccctgttctcgttgataaaactgatgatctcctcagctgtc 1450

                                                                        
Query: 362  ctcggaccgtcatataacaagagattccctccactagaagaatagaagtacagcgctggg 421
            || | |||||| ||  |||| || |||||   ||| || ||||||||||| |  | ||| 
Sbjct: 1449 cttgcaccgtcgtacgacaaaaggttccc---acttgatgaatagaagtagatagttgga 1393

                                                                        
Query: 422  tatccctcgaccgagaagtctgtcgggatatcgttcgcagtcccatccatcttcgctatg 481
            |||||||| |||| ||||||||| || ||||||||| |||| ||||||||||| ||||| 
Sbjct: 1392 tatccctcaaccgtgaagtctgttggtatatcgttcacagttccatccatctttgctatc 1333

                                                                        
Query: 482  actacatctttgtcatcttgcaacaagaccgcaacttcctccaaaatcggggccaacttc 541
            |||| ||||| ||||||||||||  | || |||| ||||||||  ||| |||| ||||| 
Sbjct: 1332 actatatcttggtcatcttgcaatgacactgcaatttcctccaggatcagggcaaacttg 1273

                                                                        
Query: 542  cggcaatgaccgcacccagggtgcatagaacttcgagtagaacatttttgccagagttga 601
            |||||||| || || ||| |||||||||||| || || | ||||||||||||||||||||
Sbjct: 1272 cggcaatggccaca-ccaaggtgcatagaac-tcaagcaaaacatttttgccagagttga 1215

                                  
Query: 602  aaacaatttcatcaatattgtc 623
            ||||||| ||||| ||||||||
Sbjct: 1214 aaacaatgtcatctatattgtc 1193



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 257  gatgatgttacctcctcttctacatcatccatctg 291
            |||||||||||||||||||| ||| |||| |||||
Sbjct: 1566 gatgatgttacctcctcttccacagcatcaatctg 1532
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>dbj|AK101074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024A20, full
            insert sequence
          Length = 2451

 Score =  139 bits (70), Expect = 1e-29
 Identities = 223/272 (81%), Gaps = 4/272 (1%)
 Strand = Plus / Minus

                                                                        
Query: 302  gctgcagcagctttggcccccctgttctttttgataaaactgatgatctcatcagctttc 361
            |||||| ||||||| |  ||||||||||  |||||||||||||||||||| |||||| ||
Sbjct: 2086 gctgcaccagctttcggtcccctgttctcgttgataaaactgatgatctcctcagctgtc 2027

                                                                        
Query: 362  ctcggaccgtcatataacaagagattccctccactagaagaatagaagtacagcgctggg 421
            || | |||||| ||  |||| || |||||   ||| || ||||||||||| |  | ||| 
Sbjct: 2026 cttgcaccgtcgtacgacaaaaggttccc---acttgatgaatagaagtagatagttgga 1970

                                                                        
Query: 422  tatccctcgaccgagaagtctgtcgggatatcgttcgcagtcccatccatcttcgctatg 481
            |||||||| |||| ||||||||| || ||||||||| |||| ||||||||||| ||||| 
Sbjct: 1969 tatccctcaaccgtgaagtctgttggtatatcgttcacagttccatccatctttgctatc 1910

                                                                        
Query: 482  actacatctttgtcatcttgcaacaagaccgcaacttcctccaaaatcggggccaacttc 541
            |||| ||||| ||||||||||||  | || |||| ||||||||  ||| |||| ||||| 
Sbjct: 1909 actatatcttggtcatcttgcaatgacactgcaatttcctccaggatcagggcaaacttg 1850

                                            
Query: 542  cggcaatgaccgcacccagggtgcatagaact 573
            |||||||| || || ||| |||||||||||||
Sbjct: 1849 cggcaatggccaca-ccaaggtgcatagaact 1819



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 584  catttttgccagagttgaaaacaatttcatcaatattgtc 623
            ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1690 catttttgccagagttgaaaacaatgtcatctatattgtc 1651



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 257  gatgatgttacctcctcttctacatcatccatctg 291
            |||||||||||||||||||| ||| |||| |||||
Sbjct: 2143 gatgatgttacctcctcttccacagcatcaatctg 2109
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>ref|XM_466195.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1959

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 154/188 (81%), Gaps = 2/188 (1%)
 Strand = Plus / Minus

                                                                        
Query: 418  tgggtatccctcgaccgagaagtctgtcgggatatcgttcgcagtcccatccatcttcgc 477
            |||||| ||||| |||| ||| |||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 1567 tgggtacccctccaccgcgaaatctgacggtacatcgttggcagtaccatccatctttgc 1508

                                                                        
Query: 478  tatgactacatctttgtcatcttgcaacaagaccgcaacttcctccaaaatcggggccaa 537
            |||||| || ||||  ||||||| |||  | || ||||| || ||||| |||||||||| 
Sbjct: 1507 tatgacgacgtcttcatcatctttcaatgaaactgcaacctcttccaagatcggggccag 1448

                                                                        
Query: 538  cttccggcaatgaccgcacccagggtgcatagaacttcgagtagaacatttttgccagag 597
            |||| | ||||| || || ||| || ||||||||| ||||| ||||| |||||||| |||
Sbjct: 1447 cttctgacaatgtccaca-ccatggagcatagaac-tcgagcagaacgtttttgccggag 1390

                    
Query: 598  ttgaaaac 605
            ||||||||
Sbjct: 1389 ttgaaaac 1382
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>dbj|AK073161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021G10, full
            insert sequence
          Length = 1816

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 154/188 (81%), Gaps = 2/188 (1%)
 Strand = Plus / Minus

                                                                        
Query: 418  tgggtatccctcgaccgagaagtctgtcgggatatcgttcgcagtcccatccatcttcgc 477
            |||||| ||||| |||| ||| |||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 1420 tgggtacccctccaccgcgaaatctgacggtacatcgttggcagtaccatccatctttgc 1361

                                                                        
Query: 478  tatgactacatctttgtcatcttgcaacaagaccgcaacttcctccaaaatcggggccaa 537
            |||||| || ||||  ||||||| |||  | || ||||| || ||||| |||||||||| 
Sbjct: 1360 tatgacgacgtcttcatcatctttcaatgaaactgcaacctcttccaagatcggggccag 1301

                                                                        
Query: 538  cttccggcaatgaccgcacccagggtgcatagaacttcgagtagaacatttttgccagag 597
            |||| | ||||| || || ||| || ||||||||| ||||| ||||| |||||||| |||
Sbjct: 1300 cttctgacaatgtccaca-ccatggagcatagaac-tcgagcagaacgtttttgccggag 1243

                    
Query: 598  ttgaaaac 605
            ||||||||
Sbjct: 1242 ttgaaaac 1235
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>dbj|AK072252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H21, full
            insert sequence
          Length = 1961

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 154/188 (81%), Gaps = 2/188 (1%)
 Strand = Plus / Minus

                                                                        
Query: 418  tgggtatccctcgaccgagaagtctgtcgggatatcgttcgcagtcccatccatcttcgc 477
            |||||| ||||| |||| ||| |||| ||| | |||||| ||||| ||||||||||| ||
Sbjct: 1567 tgggtacccctccaccgcgaaatctgacggtacatcgttggcagtaccatccatctttgc 1508

                                                                        
Query: 478  tatgactacatctttgtcatcttgcaacaagaccgcaacttcctccaaaatcggggccaa 537
            |||||| || ||||  ||||||| |||  | || ||||| || ||||| |||||||||| 
Sbjct: 1507 tatgacgacgtcttcatcatctttcaatgaaactgcaacctcttccaagatcggggccag 1448

                                                                        
Query: 538  cttccggcaatgaccgcacccagggtgcatagaacttcgagtagaacatttttgccagag 597
            |||| | ||||| || || ||| || ||||||||| ||||| ||||| |||||||| |||
Sbjct: 1447 cttctgacaatgtccaca-ccatggagcatagaac-tcgagcagaacgtttttgccggag 1390

                    
Query: 598  ttgaaaac 605
            ||||||||
Sbjct: 1389 ttgaaaac 1382
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 137/168 (81%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                            
Query: 302      gctgcagcagctttggcccccctgttctttttgataaaactgatgatctcatcagctttc 361
                |||||| ||||||| |  ||||||||||  |||||||||||||||||||| |||||| ||
Sbjct: 21708735 gctgcaccagctttcggtcccctgttctcgttgataaaactgatgatctcctcagctgtc 21708794

                                                                            
Query: 362      ctcggaccgtcatataacaagagattccctccactagaagaatagaagtacagcgctggg 421
                || | |||||| ||  |||| || |||   ||||| || ||||||||||| |  | ||| 
Sbjct: 21708795 cttgcaccgtcgtacgacaaaaggttc---ccacttgatgaatagaagtagatagttgga 21708851

                                                                
Query: 422      tatccctcgaccgagaagtctgtcgggatatcgttcgcagtcccatcc 469
                |||||||| |||| ||||||||| || ||||||||| |||| ||||||
Sbjct: 21708852 tatccctcaaccgtgaagtctgttggtatatcgttcacagttccatcc 21708899



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 584      catttttgccagagttgaaaacaatttcatcaatattgtc 623
                ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 21709232 catttttgccagagttgaaaacaatgtcatctatattgtc 21709271



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 88/106 (83%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                            
Query: 468      ccatcttcgctatgactacatctttgtcatcttgcaacaagaccgcaacttcctccaaaa 527
                ||||||| ||||| |||| ||||| ||||||||||||  | || |||| ||||||||  |
Sbjct: 21708999 ccatctttgctatcactatatcttggtcatcttgcaatgacactgcaatttcctccagga 21709058

                                                              
Query: 528      tcggggccaacttccggcaatgaccgcacccagggtgcatagaact 573
                || |||| ||||| |||||||| || || ||| |||||||||||||
Sbjct: 21709059 tcagggcaaacttgcggcaatggccaca-ccaaggtgcatagaact 21709103



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 257      gatgatgttacctcctcttctacatcatccatctg 291
                |||||||||||||||||||| ||| |||| |||||
Sbjct: 21708678 gatgatgttacctcctcttccacagcatcaatctg 21708712
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>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20,
             complete sequence
          Length = 141915

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 137/168 (81%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                         
Query: 302   gctgcagcagctttggcccccctgttctttttgataaaactgatgatctcatcagctttc 361
             |||||| ||||||| |  ||||||||||  |||||||||||||||||||| |||||| ||
Sbjct: 20352 gctgcaccagctttcggtcccctgttctcgttgataaaactgatgatctcctcagctgtc 20411

                                                                         
Query: 362   ctcggaccgtcatataacaagagattccctccactagaagaatagaagtacagcgctggg 421
             || | |||||| ||  |||| || |||   ||||| || ||||||||||| |  | ||| 
Sbjct: 20412 cttgcaccgtcgtacgacaaaaggttc---ccacttgatgaatagaagtagatagttgga 20468

                                                             
Query: 422   tatccctcgaccgagaagtctgtcgggatatcgttcgcagtcccatcc 469
             |||||||| |||| ||||||||| || ||||||||| |||| ||||||
Sbjct: 20469 tatccctcaaccgtgaagtctgttggtatatcgttcacagttccatcc 20516



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 584   catttttgccagagttgaaaacaatttcatcaatattgtc 623
             ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 20849 catttttgccagagttgaaaacaatgtcatctatattgtc 20888



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 88/106 (83%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                         
Query: 468   ccatcttcgctatgactacatctttgtcatcttgcaacaagaccgcaacttcctccaaaa 527
             ||||||| ||||| |||| ||||| ||||||||||||  | || |||| ||||||||  |
Sbjct: 20616 ccatctttgctatcactatatcttggtcatcttgcaatgacactgcaatttcctccagga 20675

                                                           
Query: 528   tcggggccaacttccggcaatgaccgcacccagggtgcatagaact 573
             || |||| ||||| |||||||| || || ||| |||||||||||||
Sbjct: 20676 tcagggcaaacttgcggcaatggccaca-ccaaggtgcatagaact 20720



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 257   gatgatgttacctcctcttctacatcatccatctg 291
             |||||||||||||||||||| ||| |||| |||||
Sbjct: 20295 gatgatgttacctcctcttccacagcatcaatctg 20329
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>gb|U41385.1|RCU41385 Ricinus communis protein disulphide isomerase PDI mRNA, complete cds
          Length = 1785

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 580  agaacatttttgccagagttgaaaacaat 608
            |||||||||||||||||||||||||||||
Sbjct: 1252 agaacatttttgccagagttgaaaacaat 1224
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>emb|AJ277379.1|TTU277379 Triticum turgidum subsp. durum mRNA for protein disulfide isomerase
            (Pdi gene), clone pPDICW1V
          Length = 1659

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 557  ccagggtgcatagaacttcgagtagaacatttttgccagagttgaa 602
            ||||||||||||||||| |||  ||||||||||||||||| |||||
Sbjct: 1234 ccagggtgcatagaact-cgataagaacatttttgccagatttgaa 1190
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>gb|AF262981.1|AF262981 Triticum aestivum protein disulfide isomerase 3 precursor (PDI3)
            mRNA, complete cds
          Length = 1862

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 557  ccagggtgcatagaacttcgagtagaacatttttgccagagttgaa 602
            ||||||||||||||||| |||  ||||||||||||||||| |||||
Sbjct: 1266 ccagggtgcatagaact-cgataagaacatttttgccagatttgaa 1222
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>gb|AF262979.1|AF262979 Triticum aestivum protein disulfide isomerase 1 precursor (PDI1)
            mRNA, complete cds
          Length = 1784

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 557  ccagggtgcatagaacttcgagtagaacatttttgccagagttgaa 602
            ||||||||||||||||| |||  ||||||||||||||||| |||||
Sbjct: 1258 ccagggtgcatagaact-cgataagaacatttttgccagatttgaa 1214
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>emb|AJ868107.1| Triticum aestivum subsp. aestivum mRNA for protein disulfide
            isomerase (PDI gene), clone CPDI-4D
          Length = 1745

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 557  ccagggtgcatagaacttcgagtagaacatttttgccagagttgaa 602
            ||||||||||||||||| |||  ||||||||||||||||| |||||
Sbjct: 1265 ccagggtgcatagaact-cgataagaacatttttgccagatttgaa 1221
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>emb|AJ868105.1| Triticum aestivum subsp. aestivum mRNA for protein disulfide
            isomerase (PDI gene), clone CPDI-4A
          Length = 1745

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 557  ccagggtgcatagaacttcgagtagaacatttttgccagagttgaa 602
            ||||||||||||||||| |||  ||||||||||||||||| |||||
Sbjct: 1265 ccagggtgcatagaact-cgataagaacatttttgccagatttgaa 1221
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>gb|AC156283.6| Mus musculus 6 BAC RP24-327I4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 172188

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 289    ctgagttacttctgctgcagca 310
              ||||||||||||||||||||||
Sbjct: 130881 ctgagttacttctgctgcagca 130902
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>gb|U11496.1|TAU11496 Triticum aestivum Chinese spring protein disulfide isomerase (PDI)
            mRNA, complete cds
          Length = 1796

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 41/46 (89%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 557  ccagggtgcatagaacttcgagtagaacatttttgccagagttgaa 602
            |||||||||||||||| ||||  |||||||||||| |||| |||||
Sbjct: 1269 ccagggtgcatagaac-tcgataagaacatttttggcagatttgaa 1225
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>gb|AC113176.8| Mus musculus chromosome 3, clone RP23-453A2, complete sequence
          Length = 217606

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 324   tgttctttttgataaaactga 344
             |||||||||||||||||||||
Sbjct: 73340 tgttctttttgataaaactga 73360
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>emb|CR661866.2|CNS0F9O0 Tetraodon nigroviridis full-length cDNA
          Length = 1100

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 265 tacctcctcttctacatcatc 285
           |||||||||||||||||||||
Sbjct: 145 tacctcctcttctacatcatc 125
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>gb|AC159969.4| Mus musculus chromosome 3, clone RP23-301F20, complete sequence
          Length = 187487

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 324   tgttctttttgataaaactga 344
             |||||||||||||||||||||
Sbjct: 87873 tgttctttttgataaaactga 87853
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>gb|BT000107.1| Arabidopsis thaliana dihydroxyacetone kinase, putative (At1g48430)
            mRNA, complete cds
          Length = 1211

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 601  aaaacaatttcatcaatattg 621
            |||||||||||||||||||||
Sbjct: 1175 aaaacaatttcatcaatattg 1195
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>gb|AY128381.1| Arabidopsis thaliana dihydroxyacetone kinase, putative (At1g48430)
            mRNA, complete cds
          Length = 2089

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 601  aaaacaatttcatcaatattg 621
            |||||||||||||||||||||
Sbjct: 2049 aaaacaatttcatcaatattg 2069
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>gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complete sequence
          Length = 165158

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    atgtgtttaggcatcagaaat 41
             |||||||||||||||||||||
Sbjct: 43941 atgtgtttaggcatcagaaat 43921
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>gb|AC123886.7| Homo sapiens BAC clone RP11-404O21 from 2, complete sequence
          Length = 162447

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    atgtgtttaggcatcagaaat 41
             |||||||||||||||||||||
Sbjct: 10308 atgtgtttaggcatcagaaat 10288
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 155     caatggcatcagaacaaaaca 175
               |||||||||||||||||||||
Sbjct: 3976162 caatggcatcagaacaaaaca 3976142
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 485      acatctttgtcatcttgcaac 505
                |||||||||||||||||||||
Sbjct: 39983809 acatctttgtcatcttgcaac 39983829
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>gb|AC112246.4| Homo sapiens BAC clone RP11-606M12 from 2, complete sequence
          Length = 72179

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    atgtgtttaggcatcagaaat 41
             |||||||||||||||||||||
Sbjct: 23390 atgtgtttaggcatcagaaat 23370
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>gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, complete sequence
          Length = 175222

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     atgtgtttaggcatcagaaat 41
              |||||||||||||||||||||
Sbjct: 173017 atgtgtttaggcatcagaaat 172997
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>gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complete sequence
          Length = 155702

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     atgtgtttaggcatcagaaat 41
              |||||||||||||||||||||
Sbjct: 111488 atgtgtttaggcatcagaaat 111468
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>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413C03
          Length = 162161

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 485   acatctttgtcatcttgcaac 505
             |||||||||||||||||||||
Sbjct: 75260 acatctttgtcatcttgcaac 75280
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>gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC F11A17 sequence, complete
            sequence
          Length = 102078

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 601  aaaacaatttcatcaatattg 621
            |||||||||||||||||||||
Sbjct: 1387 aaaacaatttcatcaatattg 1407
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>gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana BAC T1N15 from chromosome I,
             complete sequence
          Length = 95295

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 601   aaaacaatttcatcaatattg 621
             |||||||||||||||||||||
Sbjct: 17569 aaaacaatttcatcaatattg 17549
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>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073A21
          Length = 170051

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   caatggcatcagaacaaaaca 175
             |||||||||||||||||||||
Sbjct: 22828 caatggcatcagaacaaaaca 22808
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>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G02
          Length = 187265

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 155    caatggcatcagaacaaaaca 175
              |||||||||||||||||||||
Sbjct: 174633 caatggcatcagaacaaaaca 174613
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>dbj|AK068268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147I21, full
            insert sequence
          Length = 1878

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 451  atcgttcgcagtcccatccatcttcgctatgactacatctttgtc 495
            ||||||||||||  |||||||||| || ||||| ||||| |||||
Sbjct: 1392 atcgttcgcagttgcatccatcttagcgatgacaacatccttgtc 1348
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>dbj|AK059538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E04, full
            insert sequence
          Length = 1539

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 451  atcgttcgcagtcccatccatcttcgctatgactacatctttgtc 495
            ||||||||||||  |||||||||| || ||||| ||||| |||||
Sbjct: 1053 atcgttcgcagttgcatccatcttagcgatgacaacatccttgtc 1009
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>gb|AC153080.4| Colobus guereza clone CH272-279A15, complete sequence
          Length = 141541

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 582   aacatttttgccagagttgaaaac 605
             ||||||||||||||| ||||||||
Sbjct: 26993 aacatttttgccagaattgaaaac 26970
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>gb|AY648855.1| Branchiostoma belcheri tsingtaunese mitochondrial
           ubiquinol-cytochrome c reductase mRNA, complete cds;
           nuclear gene for mitochondrial product
          Length = 560

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 398 gaagaatagaagtacagcgc 417
           ||||||||||||||||||||
Sbjct: 225 gaagaatagaagtacagcgc 244
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>gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chromosome 2, complete
             sequence
          Length = 202850

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    tgtgtttaggcatcagaaat 41
             ||||||||||||||||||||
Sbjct: 45708 tgtgtttaggcatcagaaat 45689
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>gb|AC073054.2| Homo sapiens BAC clone RP11-106F1 from 7, complete sequence
          Length = 154419

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   aatggcatcagaacaaaaca 175
             ||||||||||||||||||||
Sbjct: 85989 aatggcatcagaacaaaaca 86008
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>emb|CR626904.15| Zebrafish DNA sequence from clone DKEY-53D10 in linkage group 8, complete
              sequence
          Length = 203689

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 300    ctgctgcagcagctttggcccccctgtt 327
              |||||||||||||| ||| |||||||||
Sbjct: 199479 ctgctgcagcagctgtggaccccctgtt 199506
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>emb|CR762431.9| Zebrafish DNA sequence from clone DKEY-220O10 in linkage group 13,
             complete sequence
          Length = 96564

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   ctcatcagctttcctcggac 368
             ||||||||||||||||||||
Sbjct: 79186 ctcatcagctttcctcggac 79205
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>gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, complete sequence
          Length = 186752

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     tgtgtttaggcatcagaaat 41
              ||||||||||||||||||||
Sbjct: 142258 tgtgtttaggcatcagaaat 142277
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>gb|AC010095.6| Homo sapiens BAC clone RP11-348G16 from 2, complete sequence
          Length = 179517

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     tgtgtttaggcatcagaaat 41
              ||||||||||||||||||||
Sbjct: 138184 tgtgtttaggcatcagaaat 138203
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>gb|AC009963.11| Homo sapiens BAC clone RP11-368F12 from 2, complete sequence
          Length = 190043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tgtgtttaggcatcagaaat 41
             ||||||||||||||||||||
Sbjct: 27765 tgtgtttaggcatcagaaat 27784
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>gb|AC114755.4| Homo sapiens BAC clone RP11-274P16 from 2, complete sequence
          Length = 195403

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     tgtgtttaggcatcagaaat 41
              ||||||||||||||||||||
Sbjct: 177463 tgtgtttaggcatcagaaat 177444
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>gb|AC073415.6| Homo sapiens BAC clone RP11-84C2 from 2, complete sequence
          Length = 214668

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tgtgtttaggcatcagaaat 41
             ||||||||||||||||||||
Sbjct: 69534 tgtgtttaggcatcagaaat 69553
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>gb|AC013464.6| Homo sapiens BAC clone RP11-337D5 from UL, complete sequence
          Length = 195161

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    tgtgtttaggcatcagaaat 41
             ||||||||||||||||||||
Sbjct: 38671 tgtgtttaggcatcagaaat 38652
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>gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, complete sequence
          Length = 192494

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     tgtgtttaggcatcagaaat 41
              ||||||||||||||||||||
Sbjct: 138533 tgtgtttaggcatcagaaat 138514
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>gb|AC131187.4| Mus musculus BAC clone RP24-250M7 from 13, complete sequence
          Length = 159288

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   tctgagttacttctgctgcagcag 311
             ||||||||||||||||| ||||||
Sbjct: 93448 tctgagttacttctgcttcagcag 93471
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>emb|AL592042.9| Mouse DNA sequence from clone RP23-380K13 on chromosome 2, complete
             sequence
          Length = 84122

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 480   tgactacatctttgtcatcttgca 503
             ||||||||||||| ||||||||||
Sbjct: 14441 tgactacatctttatcatcttgca 14464


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,668,726
Number of Sequences: 3902068
Number of extensions: 5668726
Number of successful extensions: 103104
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 102923
Number of HSP's gapped (non-prelim): 171
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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