| Clone Name | rbags17e15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596570.1| Saccharum officinarum clone SCEPLR1051E09, complete sequence Length = 762 Score = 202 bits (102), Expect = 9e-49 Identities = 168/190 (88%) Strand = Plus / Plus Query: 294 ggcgccggcttggcaacgacgaaggggaagtcgaggacgacgaccttgtcgagcacggcc 353 |||| ||||||||| ||||||| ||||||||||| |||||| |||||||||||| ||||| Sbjct: 341 ggcggcggcttggcgacgacgacggggaagtcgatgacgaccaccttgtcgagcgcggcc 400 Query: 354 atgaaggtggcggcgaaggcagagtgcttctcgtggcccatgcacgccgccaggtcctcg 413 |||||||||||||||||||| | |||| | |||||||||||| | || | |||||| ||| Sbjct: 401 atgaaggtggcggcgaaggcggcgtgcctgtcgtggcccatgtaggctgtcaggtcgtcg 460 Query: 414 gcgctcgcgaagctcatggagaagacgtgggtgaagccctgcgtcagcgtctcctggttc 473 ||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 461 gcggaggcgaaggtcagcgagaagacgtgggtgaagccctgcgtcagcatctcctggttc 520 Query: 474 agcacgtcct 483 |||||||||| Sbjct: 521 agcacgtcct 530 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 552 tccaccaccacgccctccttgaac 575 |||||||||||||||||||||||| Sbjct: 599 tccaccaccacgccctccttgaac 622
>gb|AY107988.1| Zea mays PCO086949 mRNA sequence Length = 861 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Minus Query: 300 ggcttggcaacgacgaaggggaagtcgaggacgacgaccttgtcgagcacggccatgaag 359 |||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||||| Sbjct: 592 ggcttggcgacgacgacggggaagtcgacgacgagcaccttgtcgatggcggccatgaag 533 Query: 360 gtggcggcgaaggcagagtgcttctcgtggcccatgcacgccgccaggtcctcggcgctc 419 |||||||||||||| | ||| | |||||| ||||| | || || ||||| ||||| Sbjct: 532 gtggcggcgaaggcggtgtggctgtcgtgggccatgtaggcggcgaggtcggcggcggag 473 Query: 420 gcgaagctcatggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacg 479 |||||| | | ||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 472 gcgaaggtgagcgagaagacgtgcgtgaagccctgcgtcagcatctcctggttcagcacg 413 Query: 480 tcct 483 |||| Sbjct: 412 tcct 409 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 548 gtcgtccaccaccacgccctccttgaac 575 |||||||||||| ||||| ||||||||| Sbjct: 344 gtcgtccaccacgacgccgtccttgaac 317
>dbj|AK099186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N09, full insert sequence Length = 700 Score = 99.6 bits (50), Expect = 1e-17 Identities = 149/182 (81%) Strand = Plus / Minus Query: 310 cgacgaaggggaagtcgaggacgacgaccttgtcgagcacggccatgaaggtggcggcga 369 |||||| ||||||||||| ||||||||||||||||| | | |||||||| ||| |||||| Sbjct: 386 cgacgacggggaagtcgacgacgacgaccttgtcgatcgccgccatgaacgtgccggcga 327 Query: 370 aggcagagtgcttctcgtggcccatgcacgccgccaggtcctcggcgctcgcgaagctca 429 | | ||| ||||||||| |||| | | || ||| || || | |||||||||| ||| Sbjct: 326 actcctggtgtctctcgtggctcatgtaggtcgtcagatcttcagagctcgcgaaggtca 267 Query: 430 tggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 |||||||| || ||||||||||| |||||| |||||||||||| ||| ||||| |||| Sbjct: 266 gcgagaagacatgagtgaagccctgtgtcagcatctcctggttcaacacatccttccccc 207 Query: 490 ac 491 || Sbjct: 206 ac 205 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 tttgaacggaatgcacggaatagag 53 |||||||||||||||||| |||||| Sbjct: 655 tttgaacggaatgcacgggatagag 631
>dbj|AK058243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H08, full insert sequence Length = 712 Score = 99.6 bits (50), Expect = 1e-17 Identities = 149/182 (81%) Strand = Plus / Minus Query: 310 cgacgaaggggaagtcgaggacgacgaccttgtcgagcacggccatgaaggtggcggcga 369 |||||| ||||||||||| ||||||||||||||||| | | |||||||| ||| |||||| Sbjct: 388 cgacgacggggaagtcgacgacgacgaccttgtcgatcgccgccatgaacgtgccggcga 329 Query: 370 aggcagagtgcttctcgtggcccatgcacgccgccaggtcctcggcgctcgcgaagctca 429 | | ||| ||||||||| |||| | | || ||| || || | |||||||||| ||| Sbjct: 328 actcctggtgtctctcgtggctcatgtaggtcgtcagatcttcagagctcgcgaaggtca 269 Query: 430 tggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 |||||||| || ||||||||||| |||||| |||||||||||| ||| ||||| |||| Sbjct: 268 gcgagaagacatgagtgaagccctgtgtcagcatctcctggttcaacacatccttccccc 209 Query: 490 ac 491 || Sbjct: 208 ac 207 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 tttgaacggaatgcacggaatagag 53 |||||||||||||||||| |||||| Sbjct: 657 tttgaacggaatgcacgggatagag 633
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 95.6 bits (48), Expect = 2e-16 Identities = 147/180 (81%) Strand = Plus / Plus Query: 310 cgacgaaggggaagtcgaggacgacgaccttgtcgagcacggccatgaaggtggcggcga 369 |||||| ||||||||||| ||||||||||||||||| | | |||||||| ||| |||||| Sbjct: 102710 cgacgacggggaagtcgacgacgacgaccttgtcgatcgccgccatgaacgtgccggcga 102769 Query: 370 aggcagagtgcttctcgtggcccatgcacgccgccaggtcctcggcgctcgcgaagctca 429 | | ||| ||||||||| |||| | | || ||| || || | |||||||||| ||| Sbjct: 102770 actcctggtgtctctcgtggctcatgtaggtcgtcagatcttcagagctcgcgaaggtca 102829 Query: 430 tggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 |||||||| || ||||||||||| |||||| |||||||||||| ||| ||||| |||| Sbjct: 102830 gcgagaagacatgagtgaagccctgtgtcagcatctcctggttcaacacatccttccccc 102889 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 tttgaacggaatgcacggaatagag 53 |||||||||||||||||| |||||| Sbjct: 102441 tttgaacggaatgcacgggatagag 102465
>gb|DQ427954.1| Sorghum propinquum locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427953.1| Sorghum bicolor voucher PI585454 locus pHER1E07 genomic sequence Length = 503 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 503 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 452
>gb|DQ427952.1| Sorghum bicolor voucher PI267539 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427951.1| Sorghum bicolor voucher PI267408 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427950.1| Sorghum bicolor voucher PI221607 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427949.1| Sorghum bicolor voucher PI152702 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427948.1| Sorghum bicolor voucher NSL92371 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427947.1| Sorghum bicolor voucher NSL87666 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427946.1| Sorghum bicolor voucher NSL77217 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427945.1| Sorghum bicolor voucher NSL77034 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427944.1| Sorghum bicolor voucher NSL56174 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427943.1| Sorghum bicolor voucher NSL56003 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427942.1| Sorghum bicolor voucher NSL55243 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427941.1| Sorghum bicolor voucher NSL51365 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427940.1| Sorghum bicolor voucher NSL51030 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427939.1| Sorghum bicolor voucher NSL50875 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>gb|DQ427938.1| Sorghum bicolor voucher BTx623 locus pHER1E07 genomic sequence Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 432 gagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcct 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 gagaagacgtgggtgaagccctgcgtcagcatctcctggttcagcacgtcct 370
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 95.6 bits (48), Expect = 2e-16 Identities = 147/180 (81%) Strand = Plus / Plus Query: 310 cgacgaaggggaagtcgaggacgacgaccttgtcgagcacggccatgaaggtggcggcga 369 |||||| ||||||||||| ||||||||||||||||| | | |||||||| ||| |||||| Sbjct: 2326711 cgacgacggggaagtcgacgacgacgaccttgtcgatcgccgccatgaacgtgccggcga 2326770 Query: 370 aggcagagtgcttctcgtggcccatgcacgccgccaggtcctcggcgctcgcgaagctca 429 | | ||| ||||||||| |||| | | || ||| || || | |||||||||| ||| Sbjct: 2326771 actcctggtgtctctcgtggctcatgtaggtcgtcagatcttcagagctcgcgaaggtca 2326830 Query: 430 tggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 |||||||| || ||||||||||| |||||| |||||||||||| ||| ||||| |||| Sbjct: 2326831 gcgagaagacatgagtgaagccctgtgtcagcatctcctggttcaacacatccttccccc 2326890 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 tttgaacggaatgcacggaatagag 53 |||||||||||||||||| |||||| Sbjct: 2326442 tttgaacggaatgcacgggatagag 2326466
>dbj|AK061232.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B02, full insert sequence Length = 1046 Score = 95.6 bits (48), Expect = 2e-16 Identities = 147/180 (81%) Strand = Plus / Minus Query: 310 cgacgaaggggaagtcgaggacgacgaccttgtcgagcacggccatgaaggtggcggcga 369 |||||| ||||||||||| ||||||||||||||||| | | |||||||| ||| |||||| Sbjct: 725 cgacgacggggaagtcgacgacgacgaccttgtcgatcgccgccatgaacgtgccggcga 666 Query: 370 aggcagagtgcttctcgtggcccatgcacgccgccaggtcctcggcgctcgcgaagctca 429 | | ||| ||||||||| |||| | | || ||| || || | |||||||||| ||| Sbjct: 665 actcctggtgtctctcgtggctcatgtaggtcgtcagatcttcagagctcgcgaaggtca 606 Query: 430 tggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 |||||||| || ||||||||||| |||||| |||||||||||| ||| ||||| |||| Sbjct: 605 gcgagaagacatgagtgaagccctgtgtcagcatctcctggttcaacacatccttccccc 546 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 tttgaacggaatgcacggaatagag 53 |||||||||||||||||| |||||| Sbjct: 991 tttgaacggaatgcacgggatagag 967
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 95.6 bits (48), Expect = 2e-16 Identities = 147/180 (81%) Strand = Plus / Plus Query: 310 cgacgaaggggaagtcgaggacgacgaccttgtcgagcacggccatgaaggtggcggcga 369 |||||| ||||||||||| ||||||||||||||||| | | |||||||| ||| |||||| Sbjct: 2334492 cgacgacggggaagtcgacgacgacgaccttgtcgatcgccgccatgaacgtgccggcga 2334551 Query: 370 aggcagagtgcttctcgtggcccatgcacgccgccaggtcctcggcgctcgcgaagctca 429 | | ||| ||||||||| |||| | | || ||| || || | |||||||||| ||| Sbjct: 2334552 actcctggtgtctctcgtggctcatgtaggtcgtcagatcttcagagctcgcgaaggtca 2334611 Query: 430 tggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 |||||||| || ||||||||||| |||||| |||||||||||| ||| ||||| |||| Sbjct: 2334612 gcgagaagacatgagtgaagccctgtgtcagcatctcctggttcaacacatccttccccc 2334671 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 tttgaacggaatgcacggaatagag 53 |||||||||||||||||| |||||| Sbjct: 2334223 tttgaacggaatgcacgggatagag 2334247
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 431 ggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 ||||||||| || |||||||||||||||||| |||| ||||||| |||| | ||||||| Sbjct: 2425210 ggagaagacatgagtgaagccctgcgtcagcatctcttggttcaacacgacttttcccc 2425268
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 431 ggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 ||||||||| || |||||||||||||||||| |||| ||||||| |||| | ||||||| Sbjct: 2425154 ggagaagacatgagtgaagccctgcgtcagcatctcttggttcaacacgacttttcccc 2425212
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 431 ggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 ||||||||| || |||||||||||||||||| |||| ||||||| |||| | ||||||| Sbjct: 150401 ggagaagacatgagtgaagccctgcgtcagcatctcttggttcaacacgacttttcccc 150459
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 431 ggagaagacgtgggtgaagccctgcgtcagcgtctcctggttcagcacgtcctttcccc 489 ||||||||| || |||||||||||||||||| |||| ||||||| |||| | ||||||| Sbjct: 118282 ggagaagacatgagtgaagccctgcgtcagcatctcttggttcaacacgacttttcccc 118224
>emb|AL713860.12| Mouse DNA sequence from clone RP23-446K18 on chromosome 11 Contains the Ccl8 and Ccl1 genes for chemokine (C-C motif) ligand 8 and 1, complete sequence Length = 129489 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 163 atagatagatggatggtggctat 185 ||||||||||||||||||||||| Sbjct: 129137 atagatagatggatggtggctat 129159
>emb|AL731866.8| Mouse DNA sequence from clone RP23-37F22 on chromosome 11 Contains the 5' end of a variant of the Ccl1 gene for chemokine (C-C motif) ligand 1, complete sequence Length = 105085 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 163 atagatagatggatggtggctat 185 ||||||||||||||||||||||| Sbjct: 1648 atagatagatggatggtggctat 1670
>emb|AL663031.15| Mouse DNA sequence from clone RP23-29H5 on chromosome 11 Contains the 3' end of the Sox30 gene for SRY-box containing gene 30, a large ribosomal protein (Rplp1) P1 pseudogene, a novel gene, the Adam19 gene for a disintegrin and metalloproteinase domain 19 (meltrin beta), the 3' end of a novel gene and a CpG island, complete sequence Length = 181021 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 atcattcacagctgcagccttc 160 |||||||||||||||||||||| Sbjct: 37515 atcattcacagctgcagccttc 37536
>emb|BX649544.12| Zebrafish DNA sequence from clone CH211-123F23 in linkage group 9, complete sequence Length = 168473 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 cttcagatagatagatggatgg 178 |||||||||||||||||||||| Sbjct: 3068 cttcagatagatagatggatgg 3047
>gb|AC154749.2| Mus musculus BAC clone RP24-399C21 from 17, complete sequence Length = 155483 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 cttcagatagatagatggatgg 178 |||||||||||||||||||||| Sbjct: 114808 cttcagatagatagatggatgg 114787
>emb|AL606705.23| Zebrafish DNA sequence from clone BUSM1-175P5 in linkage group 15, complete sequence Length = 92464 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 cttcagatagatagatggatgg 178 |||||||||||||||||||||| Sbjct: 15230 cttcagatagatagatggatgg 15209
>gb|AY103871.1| Zea mays PCO072881 mRNA sequence Length = 983 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 323 gtcgaggacgacgaccttgtcg 344 |||||||||||||||||||||| Sbjct: 322 gtcgaggacgacgaccttgtcg 301
>gb|AC103810.5| Homo sapiens chromosome 17, clone RP11-927P21, complete sequence Length = 203192 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtgg 181 ||||||||||||||||||||| Sbjct: 148013 agatagatagatggatggtgg 148033
>gb|AC165265.2| Mus musculus BAC clone RP23-15M14 from chromosome 13, complete sequence Length = 237830 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtgg 181 ||||||||||||||||||||| Sbjct: 188750 agatagatagatggatggtgg 188730
>gb|AC109587.2| Homo sapiens chromosome 3 clone CTD-2013N24, complete sequence Length = 156614 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 acagacagataccagggtggg 274 ||||||||||||||||||||| Sbjct: 6012 acagacagataccagggtggg 5992
>gb|AC104166.2| Homo sapiens chromosome 3 clone RP11-199N21, complete sequence Length = 171705 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 acagacagataccagggtggg 274 ||||||||||||||||||||| Sbjct: 171446 acagacagataccagggtggg 171426
>emb|BX276188.11| Zebrafish DNA sequence from clone CH211-245A19, complete sequence Length = 177660 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 aagcaaaaaataggaggcctt 132 ||||||||||||||||||||| Sbjct: 62981 aagcaaaaaataggaggcctt 63001
>gb|AC159207.2| Mus musculus BAC clone RP23-150H14 from chromosome 13, complete sequence Length = 191824 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtgg 181 ||||||||||||||||||||| Sbjct: 133613 agatagatagatggatggtgg 133633
>gb|AC021631.6|AC021631 Mus musculus, clone RP23-38J11, complete sequence Length = 160618 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtgg 181 ||||||||||||||||||||| Sbjct: 52155 agatagatagatggatggtgg 52175 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtgg 181 ||||||||||||||||||||| Sbjct: 51805 agatagatagatggatggtgg 51825
>emb|BX510640.4| Zebrafish DNA sequence from clone RP71-57J15 in linkage group 19, complete sequence Length = 139917 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 cagatagatagatggatggtg 180 ||||||||||||||||||||| Sbjct: 53990 cagatagatagatggatggtg 53970
>emb|AL136520.3|CNS01DW9 Human chromosome 14 DNA sequence BAC C-2325K12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171744 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 aatggtaggcacctttcagacagtg 217 |||||||||||||||| |||||||| Sbjct: 39614 aatggtaggcacctttaagacagtg 39638
>gb|AC003663.1|AC003663 Homo sapiens chromosome 17, clone HCIT87G17, complete sequence Length = 132070 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtgg 181 ||||||||||||||||||||| Sbjct: 27515 agatagatagatggatggtgg 27535
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 ccacgccctccttgaacctg 578 |||||||||||||||||||| Sbjct: 1072479 ccacgccctccttgaacctg 1072460
>gb|AE009364.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 134 of 187 of the complete sequence Length = 11849 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gcacggccatgaaggtggcg 365 |||||||||||||||||||| Sbjct: 10372 gcacggccatgaaggtggcg 10391
>gb|AE008249.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 53 of 187 of the complete sequence Length = 12036 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcacggccatgaaggtggcg 365 |||||||||||||||||||| Sbjct: 4862 gcacggccatgaaggtggcg 4843
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 30640674 agatagatagatggatggtg 30640693
>emb|CR626888.9| Zebrafish DNA sequence from clone CH211-250B7 in linkage group 16, complete sequence Length = 156550 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 17809 agatagatagatggatggtg 17828
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 121718 agatagatagatggatggtg 121699
>emb|AL954816.21| Zebrafish DNA sequence from clone DKEY-38P6 in linkage group 10, complete sequence Length = 97637 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 56930 agatagatagatggatggtg 56911
>gb|AC123921.3| Mus musculus BAC clone RP24-180J14 from chromosome 8, complete sequence Length = 183936 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gatagatagatggatggtgg 181 |||||||||||||||||||| Sbjct: 123459 gatagatagatggatggtgg 123440
>emb|BX927349.12| Zebrafish DNA sequence from clone DKEY-84K15 in linkage group 17, complete sequence Length = 159649 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcagatagatagatggatgg 178 |||||||||||||||||||| Sbjct: 29069 tcagatagatagatggatgg 29088
>emb|BX537265.19| Zebrafish DNA sequence from clone DKEY-79H4 in linkage group 5, complete sequence Length = 147095 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 77296 agatagatagatggatggtg 77315
>gb|AC130809.25| Medicago truncatula clone mth2-15i12, complete sequence Length = 114664 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cagatagatagatggatggt 179 |||||||||||||||||||| Sbjct: 48885 cagatagatagatggatggt 48866
>gb|AC151823.11| Medicago truncatula clone mth2-45h2, complete sequence Length = 125855 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cagatagatagatggatggt 179 |||||||||||||||||||| Sbjct: 93194 cagatagatagatggatggt 93213
>emb|BX293991.12| Zebrafish DNA sequence from clone CH211-261I24 in linkage group 11, complete sequence Length = 198825 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cagatagatagatggatggt 179 |||||||||||||||||||| Sbjct: 5789 cagatagatagatggatggt 5808 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cagatagatagatggatggt 179 |||||||||||||||||||| Sbjct: 5458 cagatagatagatggatggt 5477
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 340 tgtcgagcacggccatgaaggtggcggc 367 ||||||||||| ||||||||||||||| Sbjct: 3423241 tgtcgagcacgttcatgaaggtggcggc 3423268
>emb|AL359813.23| Human DNA sequence from clone RP5-895C5 on chromosome 6p12.3-21.2 Contains three novel genes (FLJ00002, FLJ30818, FLJ14207) and three CpG islands, complete sequence Length = 102892 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcagatagatagatggatgg 178 |||||||||||||||||||| Sbjct: 42724 tcagatagatagatggatgg 42705
>ref|XM_776288.1| PREDICTED: Strongylocentrotus purpuratus similar to sperm-specific sodium proton exchanger (LOC575925), mRNA Length = 4254 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 gcgtctcctggttcagcacg 479 |||||||||||||||||||| Sbjct: 1824 gcgtctcctggttcagcacg 1843
>emb|BX005361.16| Zebrafish DNA sequence from clone DKEY-19C8 in linkage group 8, complete sequence Length = 222110 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 147320 agatagatagatggatggtg 147301 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 145278 agatagatagatggatggtg 145259
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gccatgaaggtggcggcgaaggca 374 ||||||||||||||| |||||||| Sbjct: 87284 gccatgaaggtggcgacgaaggca 87307
>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01, complete sequence Length = 186325 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcagatagatagatggatgg 178 |||||||||||||||||||| Sbjct: 43038 tcagatagatagatggatgg 43057
>emb|AL031863.1|DMCEG0003 Drosophila melanogaster cosmid EG0003 Length = 37688 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 atgaaggtggcggcgaaggc 373 |||||||||||||||||||| Sbjct: 26975 atgaaggtggcggcgaaggc 26994
>emb|CR354594.13| Zebrafish DNA sequence from clone DKEY-173F1 in linkage group 13, complete sequence Length = 196408 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 49067 agatagatagatggatggtg 49086
>emb|BX511081.8| Zebrafish DNA sequence from clone DKEY-6B12 in linkage group 21, complete sequence Length = 210246 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 2098 agatagatagatggatggtg 2117
>emb|CR293511.11| Zebrafish DNA sequence from clone DKEY-93H22 in linkage group 1, complete sequence Length = 178953 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 31546 agatagatagatggatggtg 31565 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 6414 agatagatagatggatggtg 6433
>gb|AC078867.11| Homo sapiens 3 BAC RP11-605F14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132701 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 atgaaatggtaggcaccttt 208 |||||||||||||||||||| Sbjct: 101359 atgaaatggtaggcaccttt 101378
>emb|BX897670.7| Zebrafish DNA sequence from clone DKEY-117L15 in linkage group 8, complete sequence Length = 107559 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 71958 agatagatagatggatggtg 71939
>ref|NM_137318.2| Drosophila melanogaster CG5859-RA (CG5859), mRNA Length = 3269 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 atgaaggtggcggcgaaggc 373 |||||||||||||||||||| Sbjct: 2246 atgaaggtggcggcgaaggc 2227
>gb|AC099030.1| Drosophila melanogaster, chromosome 2R, region 53F-54X, BAC clone BACR09M08, complete sequence Length = 179283 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 atgaaggtggcggcgaaggc 373 |||||||||||||||||||| Sbjct: 2125 atgaaggtggcggcgaaggc 2106
>gb|AC099021.1| Drosophila melanogaster, chromosome 2R, region 53E-54X, BAC clone BACR03E17, complete sequence Length = 160338 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 atgaaggtggcggcgaaggc 373 |||||||||||||||||||| Sbjct: 106774 atgaaggtggcggcgaaggc 106755
>emb|AL954819.21| Zebrafish DNA sequence from clone CH211-1F7 in linkage group 8, complete sequence Length = 177929 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 172235 agatagatagatggatggtg 172216
>gb|AY058406.1| Drosophila melanogaster GH18129 full length cDNA Length = 3298 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 atgaaggtggcggcgaaggc 373 |||||||||||||||||||| Sbjct: 2246 atgaaggtggcggcgaaggc 2227
>emb|BX649598.17| Zebrafish DNA sequence from clone CH211-214P12 in linkage group 18, complete sequence Length = 213741 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 151701 agatagatagatggatggtg 151682 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 143394 agatagatagatggatggtg 143375
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcagatagatagatggatgg 178 |||||||||||||||||||| Sbjct: 29370022 tcagatagatagatggatgg 29370041
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 17066135 agatagatagatggatggtg 17066116
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 30732096 agatagatagatggatggtg 30732115
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 gctgcagccttcagatagatagat 172 |||||||| ||||||||||||||| Sbjct: 20087845 gctgcagctttcagatagatagat 20087822
>emb|AL929105.27| Zebrafish DNA sequence from clone CH211-142D6 in linkage group 7, complete sequence Length = 176147 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 81354 agatagatagatggatggtg 81373
>emb|AL954670.11| Zebrafish DNA sequence from clone CH211-274J15 in linkage group 10, complete sequence Length = 148765 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 63678 agatagatagatggatggtg 63659
>emb|BX465202.4| Zebrafish DNA sequence from clone CH211-191G24 in linkage group 2, complete sequence Length = 170771 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 118805 agatagatagatggatggtg 118824
>dbj|AB086653.1| Streptomyces halstedii vicenistatin biosynthetic gene cluster (vinR1, vinA, vinB, vinC, vinP2, vinP3, vinP4, vinG, vinF, vinD, vinE, vinH, vinI, vinJ, vinK, vinL, vinM, vinN, vinO, vinP1), partial and complete cds Length = 64492 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ccatgaaggtggcggcgaag 371 |||||||||||||||||||| Sbjct: 40596 ccatgaaggtggcggcgaag 40577
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 acgccgccaggtcctcggcg 416 |||||||||||||||||||| Sbjct: 2083959 acgccgccaggtcctcggcg 2083978
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 tcctggttcagcacgtcctt 484 |||||||||||||||||||| Sbjct: 3707973 tcctggttcagcacgtcctt 3707992
>emb|BX005342.14| Zebrafish DNA sequence from clone DKEY-81P7, complete sequence Length = 257502 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 168864 agatagatagatggatggtg 168845
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 6892 agatagatagatggatggtg 6873
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 59794 agatagatagatggatggtg 59775
>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1298_H07 Length = 106434 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 gctgcagccttcagatagatagat 172 |||||||| ||||||||||||||| Sbjct: 36368 gctgcagctttcagatagatagat 36345
>emb|BX005239.8| Zebrafish DNA sequence from clone CH211-144F7 in linkage group 18, complete sequence Length = 168745 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 51925 agatagatagatggatggtg 51906
>emb|AL672058.5| Zebrafish DNA sequence from clone BUSM1-47J20 in linkage group 1, complete sequence Length = 130339 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 60041 agatagatagatggatggtg 60060 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 40629 agatagatagatggatggtg 40648
>ref|XM_309651.2| Anopheles gambiae str. PEST ENSANGP00000003866 (ENSANGG00000003079), partial mRNA Length = 2091 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 ctgctgaatgatgtcgtcca 555 |||||||||||||||||||| Sbjct: 1815 ctgctgaatgatgtcgtcca 1796
>gb|AC153102.3| Sus scrofa clone RP44-33N10, complete sequence Length = 113400 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 ccacgccctccttgaacctg 578 |||||||||||||||||||| Sbjct: 97443 ccacgccctccttgaacctg 97424
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 310 cgacgaaggggaagtcgaggacgacgac 337 |||||||| ||||| ||||||||||||| Sbjct: 2401098 cgacgaagaggaagacgaggacgacgac 2401071
>gb|AC144813.3| Mus musculus BAC clone RP24-324I23 from 9, complete sequence Length = 146104 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gatagatagatggatggtgg 181 |||||||||||||||||||| Sbjct: 66764 gatagatagatggatggtgg 66783 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gatagatagatggatggtgg 181 |||||||||||||||||||| Sbjct: 66577 gatagatagatggatggtgg 66596
>emb|BX927123.8| Zebrafish DNA sequence from clone CH211-278N15 in linkage group 20, complete sequence Length = 121145 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 51925 agatagatagatggatggtg 51906
>emb|BX465206.15| Zebrafish DNA sequence from clone DKEYP-25A3 in linkage group 19, complete sequence Length = 161014 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 47344 agatagatagatggatggtg 47363 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 14617 agatagatagatggatggtg 14636
>emb|BX088706.8| Zebrafish DNA sequence from clone CH211-196C2 in linkage group 22, complete sequence Length = 145064 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 113226 agatagatagatggatggtg 113207
>emb|BX324163.8| Zebrafish DNA sequence from clone DKEY-106C17 in linkage group 3, complete sequence Length = 168712 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 168547 agatagatagatggatggtg 168566
>emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in linkage group 17, complete sequence Length = 232846 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcagatagatagatggatgg 178 |||||||||||||||||||| Sbjct: 21411 tcagatagatagatggatgg 21430
>gb|AE003805.3| Drosophila melanogaster chromosome 2R, section 45 of 73 of the complete sequence Length = 272948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 atgaaggtggcggcgaaggc 373 |||||||||||||||||||| Sbjct: 120622 atgaaggtggcggcgaaggc 120603
>emb|CR854851.12| Zebrafish DNA sequence from clone DKEY-98D7 in linkage group 16, complete sequence Length = 218036 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cagatagatagatggatggt 179 |||||||||||||||||||| Sbjct: 134828 cagatagatagatggatggt 134847
>emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chromosome 2, complete sequence Length = 200521 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcagatagatagatggatgg 178 |||||||||||||||||||| Sbjct: 180709 tcagatagatagatggatgg 180728
>gb|AC004641.1|AC004641 Drosophila melanogaster DNA sequence (P1s DS07321 (D175), DS05993 (D241), and DS06306 (D173)), complete sequence Length = 154985 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 atgaaggtggcggcgaaggc 373 |||||||||||||||||||| Sbjct: 103672 atgaaggtggcggcgaaggc 103691
>emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chromosome 4, complete sequence Length = 216239 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 73396 agatagatagatggatggtg 73377
>emb|CR354395.20| Zebrafish DNA sequence from clone DKEYP-45G11 in linkage group 12, complete sequence Length = 160211 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 82083 agatagatagatggatggtg 82102
>emb|CR936437.14| Zebrafish DNA sequence from clone CH211-197I23 in linkage group 3, complete sequence Length = 96056 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 7183 agatagatagatggatggtg 7202 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agatagatagatggatggtg 180 |||||||||||||||||||| Sbjct: 1835 agatagatagatggatggtg 1854 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,878,812 Number of Sequences: 3902068 Number of extensions: 5878812 Number of successful extensions: 141682 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140243 Number of HSP's gapped (non-prelim): 1354 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)