ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16o16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y2290_MYCBO (P64964) Hypothetical protein Mb2290c 28 5.1
2Y2267_MYCTU (P64963) Hypothetical protein Rv2267c/MT2329 28 5.1
3FA26A_HUMAN (Q86XJ0) Protein FAM26A 28 5.1

>Y2290_MYCBO (P64964) Hypothetical protein Mb2290c|
          Length = 388

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 93  HFNLLYSFSIMLEPCAGLWICPVF 22
           HF +LY+F  M+  C GLW   VF
Sbjct: 46  HFAVLYTFLSMVNSCLGLWQKIVF 69



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>Y2267_MYCTU (P64963) Hypothetical protein Rv2267c/MT2329|
          Length = 388

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 93  HFNLLYSFSIMLEPCAGLWICPVF 22
           HF +LY+F  M+  C GLW   VF
Sbjct: 46  HFAVLYTFLSMVNSCLGLWQKIVF 69



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>FA26A_HUMAN (Q86XJ0) Protein FAM26A|
          Length = 350

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 102 CTLHFNLLYSFSIMLEPCAGLWIC 31
           C +H+N LY   ++L P   L++C
Sbjct: 43  CLVHYNALYGLGLLLTPPLALFLC 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,636,542
Number of Sequences: 219361
Number of extensions: 396215
Number of successful extensions: 942
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 80,573,946
effective HSP length: 37
effective length of database: 72,457,589
effective search space used: 1738982136
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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