>AROB_PSEAE (P34002) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 368

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 29/76 (38%), Positives = 37/76 (48%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVAXXXXXXXXXXXXXXGC 172
           GW+  + + R   +L +A LPV PP  MT E F   MAVDKKV                 
Sbjct: 281 GWLSAAERDRGIRLLRRAGLPVVPPAEMTAEDFMEHMAVDKKV-LDGRLRLVLLQGLGNA 339

Query: 171 VFTGEYDRKALXXTLR 124
           V TG++ R+ L  TLR
Sbjct: 340 VVTGDFPREILDATLR 355

>AROB_PSEPK (Q88CV2) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 365

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 29/77 (37%), Positives = 37/77 (48%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVAXXXXXXXXXXXXXXGC 172
           GWID++ + R   +L  A LPV PP+ MT   F   MAVDKKV                 
Sbjct: 281 GWIDQAERDRGIRLLQDAGLPVVPPQEMTPAHFMEHMAVDKKV-LDGRLRLVLLRQMGEA 339

Query: 171 VFTGEYDRKALXXTLRA 121
           V T +Y ++ L  TL A
Sbjct: 340 VVTDDYSKEILQATLSA 356

>AROB_PSEU2 (Q4ZZE3) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 367

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 27/77 (35%), Positives = 35/77 (45%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVAXXXXXXXXXXXXXXGC 172
           GWI    + R   +  +A LPV PP+ MT + F   MA+DKKV                 
Sbjct: 281 GWISTQERDRGIRLFQRAGLPVVPPQDMTQDNFLEHMAIDKKV-IDGRLRLVLLRRMGEA 339

Query: 171 VFTGEYDRKALXXTLRA 121
           V T EY ++ L  TL A
Sbjct: 340 VITDEYPKEVLQATLVA 356

>AROB_THICR (Q31DP9) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 358

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 28/75 (37%), Positives = 39/75 (52%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVAXXXXXXXXXXXXXXGC 172
           G + ++ +KR   IL  A LPV PPK M+V++F ++MA DKKV                 
Sbjct: 281 GDLTQTDQKRIAAILQSAHLPVMPPKEMSVQQFLDLMAGDKKVQAGQIRLVLLKAIGQAY 340

Query: 171 VFTGEYDRKALXXTL 127
           V TG+Y  + L  TL
Sbjct: 341 V-TGDYPAELLERTL 354

>AROB_PSE14 (Q48PH0) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 367

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 26/77 (33%), Positives = 35/77 (45%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVAXXXXXXXXXXXXXXGC 172
           GWI    + R   +  +A LPV PP+ MT + F   MA+DKKV                 
Sbjct: 281 GWISTQDRDRGIRLFQRAGLPVVPPQDMTEDNFLEHMAIDKKV-IDGRLRLVLLRQMGEA 339

Query: 171 VFTGEYDRKALXXTLRA 121
           V T +Y ++ L  TL A
Sbjct: 340 VITDDYPKEVLQATLVA 356

>AROB_PSEPF (Q3KJA1) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 366

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 27/77 (35%), Positives = 35/77 (45%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVAXXXXXXXXXXXXXXGC 172
           GWI E  + R   +  +A LPV PP+ MT   F   MA+DKKV                 
Sbjct: 281 GWISEQERDRGIRLFQRAGLPVIPPEEMTEADFLEHMAIDKKV-IDGRLRLVLLRRMGEA 339

Query: 171 VFTGEYDRKALXXTLRA 121
           V T +Y ++ L  TL A
Sbjct: 340 VVTDDYPKEVLQATLGA 356

>AROB_PSESM (Q87V15) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 367

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 26/77 (33%), Positives = 35/77 (45%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVAXXXXXXXXXXXXXXGC 172
           GWI    + R   +  +A LPV PP+ MT + F   MA+DKKV                 
Sbjct: 281 GWISTQERDRGIRLFQRAGLPVVPPQEMTEDNFLEHMAIDKKV-IDGRLRLVLLRQIGEA 339

Query: 171 VFTGEYDRKALXXTLRA 121
           V T +Y ++ L  TL A
Sbjct: 340 VITDDYPQEVLQATLVA 356

>AROB_METCA (Q60BY2) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 359

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKK 226
           GWI +    R   +L++A+LPV PP+ +  + F   MAVDKK
Sbjct: 281 GWIGDDEVARVIRLLERARLPVVPPRELDADAFLEHMAVDKK 322

>AROB_PSEF5 (Q4KJI8) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 366

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 25/77 (32%), Positives = 34/77 (44%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVAXXXXXXXXXXXXXXGC 172
           GWI    + R   +  +A LPV PP+ M+   F   MA+DKKV                 
Sbjct: 281 GWITSQERDRGIRLFQRAGLPVIPPEEMSEADFLEHMAIDKKV-IDGRLRLVLLRRMGEA 339

Query: 171 VFTGEYDRKALXXTLRA 121
           V T +Y ++ L  TL A
Sbjct: 340 VVTDDYPKEVLQATLGA 356

>AROB_VIBF1 (Q5E2G0) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 362

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G I +S  +R   IL++AKLP+  PK MTV+ F   M  DKKV
Sbjct: 284 GLISQSDVERICSILEKAKLPLKAPKEMTVDAFMKHMMRDKKV 326

>AROB_VIBVY (Q7MH84) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 368

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G ID+    + F IL +AKLPV  P+ MT + F   M  DKKV
Sbjct: 288 GMIDQQQFDKIFSILSRAKLPVHTPESMTFDDFMTHMMRDKKV 330

>AROB_VIBVU (Q8DCM0) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 363

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G ID+    + F IL +AKLPV  P+ MT + F   M  DKKV
Sbjct: 283 GMIDQQQFDKIFSILSRAKLPVHTPESMTFDDFMTHMMRDKKV 325

>AROB_NITOC (Q3JEG3) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 359

 Score = 34.7 bits (78), Expect = 0.060
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           GW+  +   R  ++L++A LP   P+ +   +F  +MAVDKKV
Sbjct: 281 GWLSATEVGRVLNLLERAGLPRHSPEAIHKARFLELMAVDKKV 323

>AROB_SHEON (Q8EK19) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 359

 Score = 34.3 bits (77), Expect = 0.078
 Identities = 20/43 (46%), Positives = 22/43 (51%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G IDESI  R   +L    LPV  P+ M  E F   M  DKKV
Sbjct: 283 GLIDESIVCRIVQLLQAFDLPVKAPESMDFESFIQHMRRDKKV 325

>AROB_VIBCH (Q9KNV2) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 361

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 20/43 (46%), Positives = 23/43 (53%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G ID S  +R   IL +A LPV  P+ MT   F   M  DKKV
Sbjct: 282 GLIDASQFERILAILKKAHLPVRTPENMTFADFMQHMMRDKKV 324

>AROB_PSYAR (Q4FQI3) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 388

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           GW+      R   +L  A LP+TPP  + V+   N+M  DKKV
Sbjct: 297 GWLTSDEVARVKRVLLLANLPITPPP-IAVQTALNLMGHDKKV 338

>AROB_VIBPA (Q87L68) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 366

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G I E   +R   +L +AKLPV  P  M+ + F   M  DKKV
Sbjct: 287 GLISEEQFERIVALLRRAKLPVHTPDSMSFDDFIKHMMRDKKV 329

>AROB_BUCAP (Q8K939) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 360

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G + ++  KR   +L +A LPV  PK M+   +   M  DKKV
Sbjct: 283 GCLKKTDYKRILSLLKKAGLPVKGPKNMSAASYLPYMMRDKKV 325

>AROB_ACIAD (Q6F7E5) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 362

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           GWI     +R   I+ +A LP++ P  + +++F + M+ DKKV
Sbjct: 282 GWISSGDLERTKKIIQRANLPISCPP-IPLDEFLSYMSHDKKV 323

>AROB_HAEDU (Q7VNR5) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 362

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G + E    R   +L  A LP T P GMT +++   M  DKKV
Sbjct: 283 GNLTEDQLARLEKLLANAVLPTTSPDGMTADQYLPYMWRDKKV 325

>YFZ1_SCHPO (Q9US40) Putative amino-acid permease C1039.01|
          Length = 567

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 188 PFRRMSLSNPXATFLSTAMMFLNFSTVMPFGG 283
           P R +S  N  AT+L+TA +F+   T++ +GG
Sbjct: 210 PTRIISRINGVATYLNTAFLFIAGITILAYGG 241

>RPTN_HUMAN (Q6XPR3) Repetin|
          Length = 784

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 19/67 (28%), Positives = 28/67 (41%)
 Frame = -3

Query: 340 RVHQETXI*HT*SSQASCDTTKGHDGGEVQKHHGCXQEGRXRIAEAHPSERTSGRLCFHR 161
           ++ QE  + H      SC + +GH   + ++ HG   EG    AE     +T  R   H 
Sbjct: 665 QIQQERPLCHKGRDWQSCSSEQGHRQAQTRQSHG---EGLSHWAEEEQGHQTWDR---HS 718

Query: 160 RVRQESP 140
              QE P
Sbjct: 719 HESQEGP 725

>AROB_COXBU (Q83AJ2) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 360

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 345 IDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKVA 220
           +D    +R   +L Q  LP+  PK +  ++  + M +DKKVA
Sbjct: 286 LDFESLQRICRLLTQISLPIHFPKSINADELLSAMYMDKKVA 327

>AROB_BUCBP (P59487) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 355

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G++ ++   R   +L +  LP++ PK M+ E + +    DKKV
Sbjct: 279 GFMKDNDITRIISLLQRVGLPISGPKNMSFESYISNFKRDKKV 321

>AROB_ERWCT (Q6CZQ9) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 361

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 351 GWIDESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           G   +S  +R   +L +A LPV  P  MT E +   M  DKKV
Sbjct: 283 GQFSDSDVERVKSLLVRAGLPVNGPTQMTPESYLPHMMRDKKV 325

>LOLA_YERPE (Q8ZGC6) Outer-membrane lipoprotein carrier protein precursor|
          Length = 202

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 336 SIKKRXFDILDQAKLPVTPPKGMTVEKFR 250
           ++K +   ++D +K   TPPKG+T++  R
Sbjct: 174 TLKSQQSSVVDASKFTFTPPKGVTLDDQR 202

>AROB_PHOLL (Q7NA56) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 366

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 339 ESIKKRXFDILDQAKLPVTPPKGMTVEKFRNIMAVDKKV 223
           E   +R   +L++A LPV  P+ M  E +   M  DKKV
Sbjct: 288 EQDTQRIIRLLERANLPVHGPQNMPPEAYLPHMMRDKKV 326


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,516,411
Number of Sequences: 219361
Number of extensions: 623885
Number of successful extensions: 1603
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)