| Clone Name | rbags17d11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 Score = 698 bits (352), Expect = 0.0 Identities = 355/356 (99%) Strand = Plus / Minus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2371 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 2312 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2311 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 2252 Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2251 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 2192 Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2191 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 2132 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2131 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccatcca 2072 Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2071 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 2016 Score = 504 bits (254), Expect = e-139 Identities = 263/265 (99%), Gaps = 1/265 (0%) Strand = Plus / Minus Query: 2 tgcacgctaattcna-ctagctagggtatcgtcattaaacaagaaactaggtacagtagt 60 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2682 tgcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagt 2623 Query: 61 acattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2622 acattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggta 2563 Query: 121 aaaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2562 aaaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatg 2503 Query: 181 aaagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2502 aaagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccg 2443 Query: 241 gctcctccgcctcctgcttggccga 265 ||||||||||||||||||||||||| Sbjct: 2442 gctcctccgcctcctgcttggccga 2418
>gb|AY103537.1| Zea mays PCO098403 mRNA sequence Length = 2806 Score = 492 bits (248), Expect = e-136 Identities = 329/356 (92%) Strand = Plus / Minus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 2402 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2343 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2342 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 2283 Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491 ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 2282 ctcgccgtctgcttcagctcctcgctctcattgtcctgggcgaccttgtcgcggagctcc 2223 Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2222 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 2163 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| || Sbjct: 2162 ttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccg 2103 Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 |||||||||||||| || || |||||||||| |||||||||||||||||||||||| Sbjct: 2102 tacttggaggtgacgacgacgcagggggtgtcgtgcagccggttgctgatcttcac 2047 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 actacagctcgtccttgtcg 224 |||||||||||||||||||| Sbjct: 2503 actacagctcgtccttgtcg 2484
>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence Length = 1546 Score = 488 bits (246), Expect = e-134 Identities = 324/350 (92%) Strand = Plus / Minus Query: 318 gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 377 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||| || ||| Sbjct: 1240 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1181 Query: 378 ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 437 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1180 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1121 Query: 438 gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 497 || |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1120 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1061 Query: 498 atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 557 |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1060 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 1001 Query: 558 gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 617 | ||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||| Sbjct: 1000 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 941 Query: 618 gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 ||||||||||| || |||||||||| |||||||||||||||||||||||| Sbjct: 940 gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcac 891
>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence Length = 1544 Score = 488 bits (246), Expect = e-134 Identities = 324/350 (92%) Strand = Plus / Minus Query: 318 gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 377 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||| || ||| Sbjct: 1226 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1167 Query: 378 ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 437 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1166 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1107 Query: 438 gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 497 || |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1106 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1047 Query: 498 atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 557 |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1046 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 987 Query: 558 gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 617 | ||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||| Sbjct: 986 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 927 Query: 618 gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 ||||||||||| || |||||||||| |||||||||||||||||||||||| Sbjct: 926 gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcac 877
>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence Length = 719 Score = 468 bits (236), Expect = e-128 Identities = 326/356 (91%) Strand = Plus / Plus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 339 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 398 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 399 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 458 Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 459 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 518 Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 519 ttgatgatggggtgcctggggttgatctccaccaccctcttgccgcgcatgtacgcctgc 578 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 ||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 579 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 638 Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 |||||||||||||| || || ||||||||| |||||||||| |||||| |||||| Sbjct: 639 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcac 694
>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence Length = 2511 Score = 468 bits (236), Expect = e-128 Identities = 326/356 (91%) Strand = Plus / Minus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 2172 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2113 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 || ||||||||||| || ||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 2112 aactccttggggtcggggagggtgaacccgctctccatcagggccgtctggtacaccagc 2053 Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2052 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 1993 Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1992 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 1933 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 ||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 1932 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 1873 Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 |||||||||||||| || || ||||||||| |||||||||| |||||| |||||| Sbjct: 1872 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcac 1817
>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full insert sequence Length = 2708 Score = 428 bits (216), Expect = e-116 Identities = 321/356 (90%) Strand = Plus / Minus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 2416 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 2357 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 2356 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 2297 Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491 ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 2296 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2237 Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 2236 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2177 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 2176 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2117 Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 2116 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcac 2061 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 120 aaaaatggacgtccctcaaaaccatcacattt 151 ||||||||||||||||| |||||||||||||| Sbjct: 2608 aaaaatggacgtccctcgaaaccatcacattt 2577
>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full insert sequence Length = 2026 Score = 428 bits (216), Expect = e-116 Identities = 321/356 (90%) Strand = Plus / Minus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1738 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1679 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1678 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1619 Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491 ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 1618 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1559 Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1558 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1499 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 1498 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 1439 Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 1438 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcac 1383 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 120 aaaaatggacgtccctcaaaaccatcacattt 151 ||||||||||||||||| |||||||||||||| Sbjct: 1930 aaaaatggacgtccctcgaaaccatcacattt 1899
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full insert sequence Length = 1944 Score = 420 bits (212), Expect = e-114 Identities = 320/356 (89%) Strand = Plus / Minus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1656 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1597 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1596 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1537 Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491 ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 1536 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1477 Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1476 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1417 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 ||||| || ||||| |||||||||| |||||||||||||||| |||||| ||||| || Sbjct: 1416 ttgctggcatccgagagggtctgtgactgcatgatcttctccgtgttggcgctccacccg 1357 Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 1356 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcac 1301 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 120 aaaaatggacgtccctcaaaaccatcacattt 151 ||||||||||||||||| |||||||||||||| Sbjct: 1848 aaaaatggacgtccctcgaaaccatcacattt 1817
>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds Length = 2731 Score = 420 bits (212), Expect = e-114 Identities = 320/356 (89%) Strand = Plus / Minus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| | || Sbjct: 2410 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctgaaggcg 2351 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 2350 aagtccttgggatcagggaggttgaagccgctctccatgagggccgtctggtacaccagc 2291 Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491 ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 2290 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2231 Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 2230 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2171 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 2170 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2111 Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 2110 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcac 2055 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 120 aaaaatggacgtccctcaaaaccatcacattt 151 ||||||||||||||||| |||||||||||||| Sbjct: 2602 aaaaatggacgtccctcgaaaccatcacattt 2571
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 264 bits (133), Expect = 3e-67 Identities = 190/209 (90%) Strand = Plus / Plus Query: 459 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 518 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 9854 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 9913 Query: 519 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 578 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 9914 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 9973 Query: 579 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 638 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 9974 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 10033 Query: 639 gtgttgtgcagccggttgctgatcttcac 667 |||| | ||||||||||||||||||||| Sbjct: 10034 gtgtcgctcagccggttgctgatcttcac 10062 Score = 170 bits (86), Expect = 4e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 9601 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 9660 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 9661 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 9720 Query: 432 ctcgccgtctgcttcaggccctcgct 457 ||||||||||||||| || |||||| Sbjct: 9721 ttcgccgtctgcttcaagctctcgct 9746 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 120 aaaaatggacgtccctcaaaaccatcacattt 151 ||||||||||||||||| |||||||||||||| Sbjct: 9409 aaaaatggacgtccctcgaaaccatcacattt 9440
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 264 bits (133), Expect = 3e-67 Identities = 190/209 (90%) Strand = Plus / Plus Query: 459 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 518 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 29929148 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 29929207 Query: 519 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 578 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 29929208 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 29929267 Query: 579 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 638 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 29929268 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 29929327 Query: 639 gtgttgtgcagccggttgctgatcttcac 667 |||| | ||||||||||||||||||||| Sbjct: 29929328 gtgtcgctcagccggttgctgatcttcac 29929356 Score = 170 bits (86), Expect = 4e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 29928895 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 29928954 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 29928955 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 29929014 Query: 432 ctcgccgtctgcttcaggccctcgct 457 ||||||||||||||| || |||||| Sbjct: 29929015 ttcgccgtctgcttcaagctctcgct 29929040 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 120 aaaaatggacgtccctcaaaaccatcacattt 151 ||||||||||||||||| |||||||||||||| Sbjct: 29928703 aaaaatggacgtccctcgaaaccatcacattt 29928734 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 tccggctcctccgcctcctgcttggccg 264 ||||||||||||||||||| ||| |||| Sbjct: 15914667 tccggctcctccgcctcctccttcgccg 15914694
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 264 bits (133), Expect = 3e-67 Identities = 190/209 (90%) Strand = Plus / Plus Query: 459 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 518 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 5296 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 5355 Query: 519 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 578 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 5356 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 5415 Query: 579 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 638 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 5416 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 5475 Query: 639 gtgttgtgcagccggttgctgatcttcac 667 |||| | ||||||||||||||||||||| Sbjct: 5476 gtgtcgctcagccggttgctgatcttcac 5504 Score = 170 bits (86), Expect = 4e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 5043 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 5102 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 5103 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 5162 Query: 432 ctcgccgtctgcttcaggccctcgct 457 ||||||||||||||| || |||||| Sbjct: 5163 ttcgccgtctgcttcaagctctcgct 5188 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 120 aaaaatggacgtccctcaaaaccatcacattt 151 ||||||||||||||||| |||||||||||||| Sbjct: 4851 aaaaatggacgtccctcgaaaccatcacattt 4882
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 264 bits (133), Expect = 3e-67 Identities = 190/209 (90%) Strand = Plus / Plus Query: 459 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 518 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 124661 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 124720 Query: 519 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 578 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 124721 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 124780 Query: 579 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 638 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 124781 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 124840 Query: 639 gtgttgtgcagccggttgctgatcttcac 667 |||| | ||||||||||||||||||||| Sbjct: 124841 gtgtcgctcagccggttgctgatcttcac 124869 Score = 170 bits (86), Expect = 4e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 124408 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 124467 Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 124468 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 124527 Query: 432 ctcgccgtctgcttcaggccctcgct 457 ||||||||||||||| || |||||| Sbjct: 124528 ttcgccgtctgcttcaagctctcgct 124553 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 120 aaaaatggacgtccctcaaaaccatcacattt 151 ||||||||||||||||| |||||||||||||| Sbjct: 124216 aaaaatggacgtccctcgaaaccatcacattt 124247
>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds Length = 2947 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Minus Query: 510 gggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagg 569 ||||| ||||| || |||||||| ||||||||||| ||||||||||| || || || || Sbjct: 2135 gggttaatctcgagcaccctcttcccgcgcatgtatgcctgcttgctggcatcggaaaga 2076 Query: 570 gtctgtgcctgcatgatcttctccatgttggaactccatccatacttggaggtgaccacc 629 ||||| | |||||| |||||||||||||| | |||||| ||||| || || ||||| || Sbjct: 2075 gtctgagactgcataatcttctccatgtttgcactccaaccatatttcgatgtgacaaca 2016 Query: 630 acacagggggtgttgtgcagccggttgctgatcttcac 667 || || || ||||| | || ||||||||| |||||||| Sbjct: 2015 acgcaaggagtgttatccaaccggttgctaatcttcac 1978
>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.1 mRNA, complete cds Length = 2707 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088 Query: 612 tacttgga 619 ||||||| Sbjct: 2087 aacttgga 2080
>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.2 mRNA, complete cds Length = 2707 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088 Query: 612 tacttgga 619 ||||||| Sbjct: 2087 aacttgga 2080
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 76717 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 76776 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 76777 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 76836 Query: 612 tacttgga 619 ||||||| Sbjct: 76837 aacttgga 76844
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 3355 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 3414 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 3415 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 3474 Query: 612 tacttgga 619 ||||||| Sbjct: 3475 aacttgga 3482
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 20012 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 20071 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 20072 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 20131 Query: 612 tacttgga 619 ||||||| Sbjct: 20132 aacttgga 20139
>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds Length = 2702 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2201 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2142 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2141 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2082 Query: 612 tacttgga 619 ||||||| Sbjct: 2081 aacttgga 2074
>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds Length = 2472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2153 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2094 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2093 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2034 Query: 612 tacttgga 619 ||||||| Sbjct: 2033 aacttgga 2026
>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds Length = 2674 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2193 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2134 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2133 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2074 Query: 612 tacttgga 619 ||||||| Sbjct: 2073 aacttgga 2066
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 851 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 792 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 791 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 732 Query: 612 tacttgga 619 ||||||| Sbjct: 731 aacttgga 724
>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds Length = 6679 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 5136 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 5077 Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 5076 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 5017 Query: 612 tacttgga 619 ||||||| Sbjct: 5016 aacttgga 5009
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 483 cggagctccttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatg 542 ||||| ||||||||||| ||||| | || |||||||| || |||||||||||||||||| Sbjct: 80122 cggagttccttgatgatagggtgtctaggattgatctcaagaaccctcttgccgcgcatg 80063 Query: 543 tacgcctgctt 553 || || ||||| Sbjct: 80062 tatgcttgctt 80052
>gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H11.g 83 kDa heat shock protein (hsp83) mRNA, partial cds Length = 564 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctcca 522 |||||||||||||||||||| | |||||||| ||||| Sbjct: 136 agctccttgatgatggggtgtctggggttgagctcca 100
>gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A04.g 83 kDa heat shock protein (hsp83) mRNA, partial cds Length = 597 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctcca 522 |||||||||||||||||||| | |||||||| ||||| Sbjct: 513 agctccttgatgatggggtgtctggggttgagctcca 477
>emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat shock protein 83-1 and hsp83-2 gene for heat shock protein 83-2 Length = 3744 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctcca 522 |||||||||||||||||||| | |||||||| ||||| Sbjct: 1914 agctccttgatgatggggtgtctggggttgagctcca 1878
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 227 ctgctcgtgttccggctcctccgcctcctgct 258 |||||| ||||||||||||||| ||||||||| Sbjct: 178788 ctgctcctgttccggctcctcctcctcctgct 178819
>gb|AY103538.1| Zea mays PCO150589 mRNA sequence Length = 2534 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 553 tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 600 |||||| |||| ||||| |||||||| ||||||| |||||||||||| Sbjct: 1968 tgctcgagtccctcagggcctgtgccttcatgatcctctccatgttgg 1921
>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE Length = 165916 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 572 ctgtgcctgcatgatcttctccatgttggaactccatccatact 615 |||||||| ||||||| |||||||||||| | |||| ||||||| Sbjct: 33488 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 33445 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 572 ctgtgcctgcatgatcttctccatgttggaactccatccatact 615 |||||||| ||||||| |||||||||||| | |||| ||||||| Sbjct: 22847 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 22804
>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete cds Length = 2625 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 566 cagggtctgtgcctgcatgatcttctccatgttgg 600 ||||| |||||||| ||||||| |||||||||||| Sbjct: 1909 cagggcctgtgccttcatgatcctctccatgttgg 1875
>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds Length = 2397 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 553 tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccat 612 |||||| |||| ||||| ||| |||| ||||||| |||||||||||| | |||| |||| Sbjct: 1898 tgctcgtgtccctcagggcctgggccttcatgatcctctccatgttggcagtccagccat 1839 Query: 613 act 615 ||| Sbjct: 1838 act 1836
>gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock protein 90 gene, partial cds Length = 2391 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 485 gagctccttgatgatggggtgccgggggttgatctcca 522 ||||||||||||||||||||| |||||||| ||||| Sbjct: 2154 gagctccttgatgatggggtgagaggggttgagctcca 2117
>gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA Length = 1210 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctccag 523 |||| |||||||||||||||| |||||||||||||| Sbjct: 910 agcttcttgatgatggggtgctttgggttgatctccag 873
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 atttctttctaatgaaatgaaa 183 |||||||||||||||||||||| Sbjct: 1261169 atttctttctaatgaaatgaaa 1261148
>ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1), mRNA Length = 2478 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctccag 523 |||| |||||||||||||||| |||||||||||||| Sbjct: 2197 agcttcttgatgatggggtgctttgggttgatctccag 2160
>gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock protein 90 (HSP-90) gene, partial cds Length = 1873 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctccag 523 |||||||||||||||| ||| | |||||||||||||| Sbjct: 1740 agctccttgatgatggcgtggctcgggttgatctccag 1703
>gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related protein TRAP1 mRNA, complete cds Length = 2162 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctccag 523 |||| |||||||||||||||| |||||||||||||| Sbjct: 2000 agcttcttgatgatggggtgctttgggttgatctccag 1963
>gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA Length = 2475 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctccag 523 |||| |||||||||||||||| |||||||||||||| Sbjct: 2193 agcttcttgatgatggggtgctttgggttgatctccag 2156
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 ctcctccgcctcctgcttggcc 263 |||||||||||||||||||||| Sbjct: 2035901 ctcctccgcctcctgcttggcc 2035922
>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence Length = 2179 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 572 ctgtgcctgcatgatcttctccatgttgg 600 |||||||| ||||||| |||||||||||| Sbjct: 1704 ctgtgccttcatgatcctctccatgttgg 1676
>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence Length = 241834 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 tggaactccatccatacttgg 618 ||||||||||||||||||||| Sbjct: 152955 tggaactccatccatacttgg 152935
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 ctaatgaaatgaaagctaaat 190 ||||||||||||||||||||| Sbjct: 1421262 ctaatgaaatgaaagctaaat 1421242
>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11 Length = 346357 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 agtccttggggtccggcaggt 393 ||||||||||||||||||||| Sbjct: 266763 agtccttggggtccggcaggt 266743
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ttctaatgaaatgaaagctaa 188 ||||||||||||||||||||| Sbjct: 112594 ttctaatgaaatgaaagctaa 112614
>ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense (Dlx6as) on chromosome 6 Length = 1351 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 ggctcctccgcctcctgcttg 260 ||||||||||||||||||||| Sbjct: 1084 ggctcctccgcctcctgcttg 1064
>ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 (ENSANGG00000003636), partial mRNA Length = 3264 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 cctccgcctcctgcttggccg 264 ||||||||||||||||||||| Sbjct: 1432 cctccgcctcctgcttggccg 1412
>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence Length = 183177 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 aaccatcacatttccagtcca 159 ||||||||||||||||||||| Sbjct: 132650 aaccatcacatttccagtcca 132630
>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence Length = 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 572 ctgtgcctgcatgatcttctccatgttgg 600 |||||||| ||||||| |||||||||||| Sbjct: 687 ctgtgccttcatgatcctctccatgttgg 659
>gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partial sequence Length = 1351 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 ggctcctccgcctcctgcttg 260 ||||||||||||||||||||| Sbjct: 1084 ggctcctccgcctcctgcttg 1064
>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence Length = 211740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 ggctcctccgcctcctgcttg 260 ||||||||||||||||||||| Sbjct: 107299 ggctcctccgcctcctgcttg 107319
>gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end Length = 1496 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 ccctcgctgtcgctgtcctgg 470 ||||||||||||||||||||| Sbjct: 349 ccctcgctgtcgctgtcctgg 329
>gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome 12, complete sequence Length = 199499 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 598 tggaactccatccatacttgg 618 ||||||||||||||||||||| Sbjct: 49214 tggaactccatccatacttgg 49234
>gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 mRNA, 3' end Length = 2197 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 490 ccttgatgatggggtgccgggggttgatctcca 522 |||||||||||||||| | |||||||| ||||| Sbjct: 1105 ccttgatgatggggtgtctggggttgagctcca 1073
>gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 83 gene, complete cds Length = 2106 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtgccgggggttgatctcca 522 |||||||||||||||||||| |||||||| ||||| Sbjct: 1853 agctccttgatgatggggtgtttggggttgagctcca 1817
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 ggaggtgaccaccacacagg 636 |||||||||||||||||||| Sbjct: 1304504 ggaggtgaccaccacacagg 1304485
>ref|XM_598073.2| PREDICTED: Bos taurus similar to SLIT-ROBO Rho GTPase activating protein 2 (srGAP2) (Formin-binding protein 2) (LOC519843), partial mRNA Length = 2576 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 431 cctcgccgtctgcttcaggccctcgctg 458 ||||||| |||||||| ||||||||||| Sbjct: 1086 cctcgccatctgcttcgggccctcgctg 1113
>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence Length = 176549 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aactaggtacagtagtacat 64 |||||||||||||||||||| Sbjct: 13547 aactaggtacagtagtacat 13528
>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence Length = 211511 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tcattaaacaagaaactagg 51 |||||||||||||||||||| Sbjct: 83603 tcattaaacaagaaactagg 83584
>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence Length = 179362 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aactaggtacagtagtacat 64 |||||||||||||||||||| Sbjct: 148078 aactaggtacagtagtacat 148059
>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 214065 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ctgcttcaggccctcgctgt 459 |||||||||||||||||||| Sbjct: 175515 ctgcttcaggccctcgctgt 175534
>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute Human BAC Library) complete sequence Length = 171236 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 aatgaaatgaaagctaaatg 191 |||||||||||||||||||| Sbjct: 60679 aatgaaatgaaagctaaatg 60698
>gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 heat shock protein (hsp-83) gene, complete cds Length = 3520 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 agctccttgatgatggggtg 505 |||||||||||||||||||| Sbjct: 2455 agctccttgatgatggggtg 2436
>gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, complete sequence Length = 161786 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 ctaatgaaatgaaagctaaatggg 193 ||||||||| |||||||||||||| Sbjct: 22238 ctaatgaaaagaaagctaaatggg 22261
>gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FKHR mRNA, partial cds Length = 1000 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atctccaggaccctcttgcc 535 |||||||||||||||||||| Sbjct: 336 atctccaggaccctcttgcc 317
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcttcaggccctcgctgtcg 461 |||||||||||||||||||| Sbjct: 9004724 gcttcaggccctcgctgtcg 9004705 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gcttcaggccctcgctgtcg 461 |||||||||||||||||||| Sbjct: 5172865 gcttcaggccctcgctgtcg 5172884
>ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (Foxo1a), mRNA Length = 4171 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atctccaggaccctcttgcc 535 |||||||||||||||||||| Sbjct: 1259 atctccaggaccctcttgcc 1240
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 tccggctcctccgcctcctgcttggccg 264 ||||||||||||||||||| ||| |||| Sbjct: 48116 tccggctcctccgcctcctccttcgccg 48143
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 tccggctcctccgcctcctgcttggccg 264 ||||||||||||||||||| ||| |||| Sbjct: 127670 tccggctcctccgcctcctccttcgccg 127697
>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence Length = 174952 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctaatgaaatgaaagctaaa 189 |||||||||||||||||||| Sbjct: 56061 ctaatgaaatgaaagctaaa 56080
>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4, complete sequence Length = 99176 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 catttccagtccaacatttc 166 |||||||||||||||||||| Sbjct: 21017 catttccagtccaacatttc 21036
>dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-619A14, complete sequence Length = 126000 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ggggctcaggtccaggctct 342 |||||||||||||||||||| Sbjct: 18841 ggggctcaggtccaggctct 18822
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ctcctccgcctcctgcttgg 261 |||||||||||||||||||| Sbjct: 1682827 ctcctccgcctcctgcttgg 1682846
>emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chromosome 4, complete sequence Length = 190179 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 aactaggtacagtagtacat 64 |||||||||||||||||||| Sbjct: 70193 aactaggtacagtagtacat 70212
>dbj|AB022081.1| Brassica rapa DNA for ORF-c, complete cds Length = 573 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 tcttctccatgttggaactc 605 |||||||||||||||||||| Sbjct: 401 tcttctccatgttggaactc 382
>dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, complete cds Length = 4219 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 ttgatctccaggaccctcttgccg 536 |||| ||||||||||||||||||| Sbjct: 485 ttgagctccaggaccctcttgccg 462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,564,379 Number of Sequences: 3902068 Number of extensions: 4564379 Number of successful extensions: 105332 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104946 Number of HSP's gapped (non-prelim): 386 length of query: 667 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 644 effective length of database: 17,143,297,704 effective search space: 11040283721376 effective search space used: 11040283721376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)