ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue 698 0.0
2gb|AY103537.1| Zea mays PCO098403 mRNA sequence 492 e-136
3gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence 488 e-134
4gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence 488 e-134
5gb|BT016887.1| Zea mays clone Contig720 mRNA sequence 468 e-128
6gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence 468 e-128
7dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-116
8dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-116
9dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 420 e-114
10dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 9... 420 e-114
11gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 264 3e-67
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
13dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
14dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
15gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds 92 3e-15
16ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP bindin... 80 1e-11
17ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP bindin... 80 1e-11
18emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BA... 80 1e-11
19emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BA... 80 1e-11
20emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, ... 80 1e-11
21gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, com... 80 1e-11
22gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, com... 80 1e-11
23dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, comp... 80 1e-11
24gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC ... 80 1e-11
25dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, comp... 80 1e-11
26gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete seq... 62 2e-06
27gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H... 50 0.009
28gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A... 50 0.009
29emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat... 50 0.009
30gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 48 0.037
31gb|AY103538.1| Zea mays PCO150589 mRNA sequence 48 0.037
32emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8,... 48 0.037
33gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta... 46 0.15
34gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRN... 46 0.15
35gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock pr... 44 0.58
36gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA 44 0.58
37dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 44 0.58
38ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1)... 44 0.58
39gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock ... 44 0.58
40gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related pro... 44 0.58
41gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA 44 0.58
42gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 44 0.58
43gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence 42 2.3
44gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosom... 42 2.3
45gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 42 2.3
46emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, stra... 42 2.3
47gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cance... 42 2.3
48ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense ... 42 2.3
49ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 ... 42 2.3
50gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, comple... 42 2.3
51gb|AY109427.1| Zea mays CL1264_2 mRNA sequence 42 2.3
52gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partia... 42 2.3
53gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complet... 42 2.3
54gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end 42 2.3
55gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome... 42 2.3
56gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 m... 42 2.3
57gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 8... 42 2.3
58gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 9.1
59ref|XM_598073.2| PREDICTED: Bos taurus similar to SLIT-ROBO Rho ... 40 9.1
60gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosom... 40 9.1
61gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosom... 40 9.1
62gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complet... 40 9.1
63emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chr... 40 9.1
64gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Par... 40 9.1
65gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 hea... 40 9.1
66gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, comple... 40 9.1
67gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FK... 40 9.1
68dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.1
69ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (... 40 9.1
70dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
71dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
72gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequ... 40 9.1
73emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 9.1
74dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.1
75gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 9.1
76emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chro... 40 9.1
77dbj|AB022081.1| Brassica rapa DNA for ORF-c, complete cds 40 9.1
78dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, comp... 40 9.1

>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue
          Length = 2682

 Score =  698 bits (352), Expect = 0.0
 Identities = 355/356 (99%)
 Strand = Plus / Minus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 2312

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2311 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 2252

                                                                        
Query: 432  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 2192

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 2132

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2131 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccatcca 2072

                                                                    
Query: 612  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2071 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 2016



 Score =  504 bits (254), Expect = e-139
 Identities = 263/265 (99%), Gaps = 1/265 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2    tgcacgctaattcna-ctagctagggtatcgtcattaaacaagaaactaggtacagtagt 60
            ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2682 tgcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagt 2623

                                                                        
Query: 61   acattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggta 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2622 acattacacggacaaaaccccccgtatcacgatcgatgattaatcgtcttccgcgcggta 2563

                                                                        
Query: 121  aaaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2562 aaaatggacgtccctcaaaaccatcacatttccagtccaacatttctttctaatgaaatg 2503

                                                                        
Query: 181  aaagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2502 aaagctaaatgggcgatatgagcaactacagctcgtccttgtcgtactgctcgtgttccg 2443

                                     
Query: 241  gctcctccgcctcctgcttggccga 265
            |||||||||||||||||||||||||
Sbjct: 2442 gctcctccgcctcctgcttggccga 2418



to top

>gb|AY103537.1| Zea mays PCO098403 mRNA sequence
          Length = 2806

 Score =  492 bits (248), Expect = e-136
 Identities = 329/356 (92%)
 Strand = Plus / Minus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 2402 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2343

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2342 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 2283

                                                                        
Query: 432  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491
            |||||||||||||||||  ||||||| ||  |||||||||||||||||||||||||||||
Sbjct: 2282 ctcgccgtctgcttcagctcctcgctctcattgtcctgggcgaccttgtcgcggagctcc 2223

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2222 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 2163

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||||||| ||||||||||||||| |||||||||||||||||||||||||  ||||| || 
Sbjct: 2162 ttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccg 2103

                                                                    
Query: 612  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            |||||||||||||| || || |||||||||| ||||||||||||||||||||||||
Sbjct: 2102 tacttggaggtgacgacgacgcagggggtgtcgtgcagccggttgctgatcttcac 2047



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 205  actacagctcgtccttgtcg 224
            ||||||||||||||||||||
Sbjct: 2503 actacagctcgtccttgtcg 2484



to top

>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence
          Length = 1546

 Score =  488 bits (246), Expect = e-134
 Identities = 324/350 (92%)
 Strand = Plus / Minus

                                                                        
Query: 318  gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 377
            |||||||||||||||||||||| |||||||||||||  ||||||||| ||||| || |||
Sbjct: 1240 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1181

                                                                        
Query: 378  ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 437
            |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1180 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1121

                                                                        
Query: 438  gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 497
            || ||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1120 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1061

                                                                        
Query: 498  atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 557
            |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1060 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 1001

                                                                        
Query: 558  gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 617
            | ||||||||||||||| |||||||||||||||||||||||||  ||||| || ||||||
Sbjct: 1000 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 941

                                                              
Query: 618  gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            ||||||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct: 940  gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcac 891



to top

>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence
          Length = 1544

 Score =  488 bits (246), Expect = e-134
 Identities = 324/350 (92%)
 Strand = Plus / Minus

                                                                        
Query: 318  gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 377
            |||||||||||||||||||||| |||||||||||||  ||||||||| ||||| || |||
Sbjct: 1226 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1167

                                                                        
Query: 378  ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 437
            |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1166 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1107

                                                                        
Query: 438  gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 497
            || ||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1106 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1047

                                                                        
Query: 498  atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 557
            |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1046 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 987

                                                                        
Query: 558  gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 617
            | ||||||||||||||| |||||||||||||||||||||||||  ||||| || ||||||
Sbjct: 986  gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 927

                                                              
Query: 618  gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            ||||||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct: 926  gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcac 877



to top

>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence
          Length = 719

 Score =  468 bits (236), Expect = e-128
 Identities = 326/356 (91%)
 Strand = Plus / Plus

                                                                       
Query: 312 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
           ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 339 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 398

                                                                       
Query: 372 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
           || ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 399 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 458

                                                                       
Query: 432 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491
           |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 459 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 518

                                                                       
Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
           |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 519 ttgatgatggggtgcctggggttgatctccaccaccctcttgccgcgcatgtacgcctgc 578

                                                                       
Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
           ||||||| ||||||||| ||||| |||||||||||||||||||||||||  ||||| || 
Sbjct: 579 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 638

                                                                   
Query: 612 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
           |||||||||||||| || ||  ||||||||| |||||||||| |||||| ||||||
Sbjct: 639 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcac 694



to top

>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence
          Length = 2511

 Score =  468 bits (236), Expect = e-128
 Identities = 326/356 (91%)
 Strand = Plus / Minus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||| |||||||||||||||||||||||||| |||||||||  ||||||||| ||||| 
Sbjct: 2172 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2113

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            || ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 2112 aactccttggggtcggggagggtgaacccgctctccatcagggccgtctggtacaccagc 2053

                                                                        
Query: 432  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491
            |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2052 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 1993

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1992 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 1933

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||||||| ||||||||| ||||| |||||||||||||||||||||||||  ||||| || 
Sbjct: 1932 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 1873

                                                                    
Query: 612  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            |||||||||||||| || ||  ||||||||| |||||||||| |||||| ||||||
Sbjct: 1872 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcac 1817



to top

>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full
            insert sequence
          Length = 2708

 Score =  428 bits (216), Expect = e-116
 Identities = 321/356 (90%)
 Strand = Plus / Minus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 2416 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 2357

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 2356 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 2297

                                                                        
Query: 432  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 2296 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2237

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 2236 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2177

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  ||||| || 
Sbjct: 2176 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2117

                                                                    
Query: 612  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            |||||||| || |||||||| |||||||||| |  |||||||||||||||||||||
Sbjct: 2116 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcac 2061



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 120  aaaaatggacgtccctcaaaaccatcacattt 151
            ||||||||||||||||| ||||||||||||||
Sbjct: 2608 aaaaatggacgtccctcgaaaccatcacattt 2577



to top

>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full
            insert sequence
          Length = 2026

 Score =  428 bits (216), Expect = e-116
 Identities = 321/356 (90%)
 Strand = Plus / Minus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 1738 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1679

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1678 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1619

                                                                        
Query: 432  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1618 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1559

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1558 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1499

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  ||||| || 
Sbjct: 1498 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 1439

                                                                    
Query: 612  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            |||||||| || |||||||| |||||||||| |  |||||||||||||||||||||
Sbjct: 1438 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcac 1383



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 120  aaaaatggacgtccctcaaaaccatcacattt 151
            ||||||||||||||||| ||||||||||||||
Sbjct: 1930 aaaaatggacgtccctcgaaaccatcacattt 1899



to top

>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full
            insert sequence
          Length = 1944

 Score =  420 bits (212), Expect = e-114
 Identities = 320/356 (89%)
 Strand = Plus / Minus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 1656 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1597

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1596 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1537

                                                                        
Query: 432  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1536 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1477

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1476 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1417

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||||| || ||||| |||||||||| |||||||||||||||| ||||||  ||||| || 
Sbjct: 1416 ttgctggcatccgagagggtctgtgactgcatgatcttctccgtgttggcgctccacccg 1357

                                                                    
Query: 612  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            |||||||| || |||||||| |||||||||| |  |||||||||||||||||||||
Sbjct: 1356 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcac 1301



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 120  aaaaatggacgtccctcaaaaccatcacattt 151
            ||||||||||||||||| ||||||||||||||
Sbjct: 1848 aaaaatggacgtccctcgaaaccatcacattt 1817



to top

>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds
          Length = 2731

 Score =  420 bits (212), Expect = e-114
 Identities = 320/356 (89%)
 Strand = Plus / Minus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||  | || 
Sbjct: 2410 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctgaaggcg 2351

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 2350 aagtccttgggatcagggaggttgaagccgctctccatgagggccgtctggtacaccagc 2291

                                                                        
Query: 432  ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 491
             ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 2290 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2231

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 2230 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2171

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||||| || ||||| |||||||||| |||||||||||||||||||||||  ||||| || 
Sbjct: 2170 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2111

                                                                    
Query: 612  tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcac 667
            |||||||| || |||||||| |||||||||| |  |||||||||||||||||||||
Sbjct: 2110 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcac 2055



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 120  aaaaatggacgtccctcaaaaccatcacattt 151
            ||||||||||||||||| ||||||||||||||
Sbjct: 2602 aaaaatggacgtccctcgaaaccatcacattt 2571



to top

>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
             sequence
          Length = 143507

 Score =  264 bits (133), Expect = 3e-67
 Identities = 190/209 (90%)
 Strand = Plus / Plus

                                                                         
Query: 459   tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 518
             ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 9854  tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 9913

                                                                         
Query: 519   tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 578
             || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 9914  tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 9973

                                                                         
Query: 579   tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 638
             ||||||||||||||||||||||  ||||| || |||||||| || |||||||| ||||||
Sbjct: 9974  tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 10033

                                          
Query: 639   gtgttgtgcagccggttgctgatcttcac 667
             |||| |  |||||||||||||||||||||
Sbjct: 10034 gtgtcgctcagccggttgctgatcttcac 10062



 Score =  170 bits (86), Expect = 4e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 9601 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 9660

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 9661 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 9720

                                      
Query: 432  ctcgccgtctgcttcaggccctcgct 457
             ||||||||||||||| || ||||||
Sbjct: 9721 ttcgccgtctgcttcaagctctcgct 9746



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 120  aaaaatggacgtccctcaaaaccatcacattt 151
            ||||||||||||||||| ||||||||||||||
Sbjct: 9409 aaaaatggacgtccctcgaaaccatcacattt 9440



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  264 bits (133), Expect = 3e-67
 Identities = 190/209 (90%)
 Strand = Plus / Plus

                                                                            
Query: 459      tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 518
                ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 29929148 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 29929207

                                                                            
Query: 519      tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 578
                || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 29929208 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 29929267

                                                                            
Query: 579      tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 638
                ||||||||||||||||||||||  ||||| || |||||||| || |||||||| ||||||
Sbjct: 29929268 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 29929327

                                             
Query: 639      gtgttgtgcagccggttgctgatcttcac 667
                |||| |  |||||||||||||||||||||
Sbjct: 29929328 gtgtcgctcagccggttgctgatcttcac 29929356



 Score =  170 bits (86), Expect = 4e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                            
Query: 312      acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
                ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 29928895 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 29928954

                                                                            
Query: 372      aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
                ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 29928955 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 29929014

                                          
Query: 432      ctcgccgtctgcttcaggccctcgct 457
                 ||||||||||||||| || ||||||
Sbjct: 29929015 ttcgccgtctgcttcaagctctcgct 29929040



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 120      aaaaatggacgtccctcaaaaccatcacattt 151
                ||||||||||||||||| ||||||||||||||
Sbjct: 29928703 aaaaatggacgtccctcgaaaccatcacattt 29928734



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 237      tccggctcctccgcctcctgcttggccg 264
                ||||||||||||||||||| ||| ||||
Sbjct: 15914667 tccggctcctccgcctcctccttcgccg 15914694



to top

>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0541C02
          Length = 150660

 Score =  264 bits (133), Expect = 3e-67
 Identities = 190/209 (90%)
 Strand = Plus / Plus

                                                                        
Query: 459  tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 518
            ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 5296 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 5355

                                                                        
Query: 519  tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 578
            || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 5356 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 5415

                                                                        
Query: 579  tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 638
            ||||||||||||||||||||||  ||||| || |||||||| || |||||||| ||||||
Sbjct: 5416 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 5475

                                         
Query: 639  gtgttgtgcagccggttgctgatcttcac 667
            |||| |  |||||||||||||||||||||
Sbjct: 5476 gtgtcgctcagccggttgctgatcttcac 5504



 Score =  170 bits (86), Expect = 4e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                        
Query: 312  acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
            ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 5043 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 5102

                                                                        
Query: 372  aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
            ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 5103 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 5162

                                      
Query: 432  ctcgccgtctgcttcaggccctcgct 457
             ||||||||||||||| || ||||||
Sbjct: 5163 ttcgccgtctgcttcaagctctcgct 5188



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 120  aaaaatggacgtccctcaaaaccatcacattt 151
            ||||||||||||||||| ||||||||||||||
Sbjct: 4851 aaaaatggacgtccctcgaaaccatcacattt 4882



to top

>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score =  264 bits (133), Expect = 3e-67
 Identities = 190/209 (90%)
 Strand = Plus / Plus

                                                                          
Query: 459    tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 518
              ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 124661 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 124720

                                                                          
Query: 519    tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 578
              || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| |
Sbjct: 124721 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 124780

                                                                          
Query: 579    tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 638
              ||||||||||||||||||||||  ||||| || |||||||| || |||||||| ||||||
Sbjct: 124781 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 124840

                                           
Query: 639    gtgttgtgcagccggttgctgatcttcac 667
              |||| |  |||||||||||||||||||||
Sbjct: 124841 gtgtcgctcagccggttgctgatcttcac 124869



 Score =  170 bits (86), Expect = 4e-39
 Identities = 131/146 (89%)
 Strand = Plus / Plus

                                                                          
Query: 312    acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 371
              ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || 
Sbjct: 124408 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 124467

                                                                          
Query: 372    aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 431
              ||||||||||| || || |||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 124468 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 124527

                                        
Query: 432    ctcgccgtctgcttcaggccctcgct 457
               ||||||||||||||| || ||||||
Sbjct: 124528 ttcgccgtctgcttcaagctctcgct 124553



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 120    aaaaatggacgtccctcaaaaccatcacattt 151
              ||||||||||||||||| ||||||||||||||
Sbjct: 124216 aaaaatggacgtccctcgaaaccatcacattt 124247



to top

>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds
          Length = 2947

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 510  gggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagg 569
            ||||| ||||| || |||||||| ||||||||||| ||||||||||| || || || || 
Sbjct: 2135 gggttaatctcgagcaccctcttcccgcgcatgtatgcctgcttgctggcatcggaaaga 2076

                                                                        
Query: 570  gtctgtgcctgcatgatcttctccatgttggaactccatccatacttggaggtgaccacc 629
            ||||| | |||||| |||||||||||||| | |||||| ||||| || || ||||| || 
Sbjct: 2075 gtctgagactgcataatcttctccatgtttgcactccaaccatatttcgatgtgacaaca 2016

                                                  
Query: 630  acacagggggtgttgtgcagccggttgctgatcttcac 667
            || || || ||||| | || ||||||||| ||||||||
Sbjct: 2015 acgcaaggagtgttatccaaccggttgctaatcttcac 1978



to top

>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein
            binding AT4G24190 (SHD) transcript variant AT4G24190.1
            mRNA, complete cds
          Length = 2707

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088

                    
Query: 612  tacttgga 619
             |||||||
Sbjct: 2087 aacttgga 2080



to top

>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein
            binding AT4G24190 (SHD) transcript variant AT4G24190.2
            mRNA, complete cds
          Length = 2707

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088

                    
Query: 612  tacttgga 619
             |||||||
Sbjct: 2087 aacttgga 2080



to top

>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial
             sequence (ESSA project)
          Length = 77567

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Plus

                                                                         
Query: 492   ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
             |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 76717 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 76776

                                                                         
Query: 552   ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
             ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 76777 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 76836

                     
Query: 612   tacttgga 619
              |||||||
Sbjct: 76837 aacttgga 76844



to top

>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project)
          Length = 108459

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Plus

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 3355 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 3414

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 3415 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 3474

                    
Query: 612  tacttgga 619
             |||||||
Sbjct: 3475 aacttgga 3482



to top

>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
          Length = 198402

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Plus

                                                                         
Query: 492   ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
             |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 20012 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 20071

                                                                         
Query: 552   ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
             ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 20072 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 20131

                     
Query: 612   tacttgga 619
              |||||||
Sbjct: 20132 aacttgga 20139



to top

>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds
          Length = 2702

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2201 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2142

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2141 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2082

                    
Query: 612  tacttgga 619
             |||||||
Sbjct: 2081 aacttgga 2074



to top

>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2153 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2094

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2093 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2034

                    
Query: 612  tacttgga 619
             |||||||
Sbjct: 2033 aacttgga 2026



to top

>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds
          Length = 2674

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 2193 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2134

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 2133 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2074

                    
Query: 612  tacttgga 619
             |||||||
Sbjct: 2073 aacttgga 2066



to top

>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence,
           complete sequence
          Length = 116156

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 492 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
           |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 851 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 792

                                                                       
Query: 552 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
           ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 791 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 732

                   
Query: 612 tacttgga 619
            |||||||
Sbjct: 731 aacttgga 724



to top

>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds
          Length = 6679

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 551
            |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 5136 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 5077

                                                                        
Query: 552  ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 611
            ||  | || ||||| || || || | |||||||||| ||||||| || | ||||||||||
Sbjct: 5076 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 5017

                    
Query: 612  tacttgga 619
             |||||||
Sbjct: 5016 aacttgga 5009



to top

>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence
          Length = 116601

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 483   cggagctccttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatg 542
             ||||| ||||||||||| ||||| |  || |||||||| || ||||||||||||||||||
Sbjct: 80122 cggagttccttgatgatagggtgtctaggattgatctcaagaaccctcttgccgcgcatg 80063

                        
Query: 543   tacgcctgctt 553
             || || |||||
Sbjct: 80062 tatgcttgctt 80052



to top

>gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H11.g 83 kDa heat
           shock protein (hsp83) mRNA, partial cds
          Length = 564

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 486 agctccttgatgatggggtgccgggggttgatctcca 522
           |||||||||||||||||||| | |||||||| |||||
Sbjct: 136 agctccttgatgatggggtgtctggggttgagctcca 100



to top

>gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A04.g 83 kDa heat
           shock protein (hsp83) mRNA, partial cds
          Length = 597

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 486 agctccttgatgatggggtgccgggggttgatctcca 522
           |||||||||||||||||||| | |||||||| |||||
Sbjct: 513 agctccttgatgatggggtgtctggggttgagctcca 477



to top

>emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat shock protein 83-1 and
            hsp83-2 gene for heat shock protein 83-2
          Length = 3744

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 486  agctccttgatgatggggtgccgggggttgatctcca 522
            |||||||||||||||||||| | |||||||| |||||
Sbjct: 1914 agctccttgatgatggggtgtctggggttgagctcca 1878



to top

>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 227    ctgctcgtgttccggctcctccgcctcctgct 258
              |||||| ||||||||||||||| |||||||||
Sbjct: 178788 ctgctcctgttccggctcctcctcctcctgct 178819



to top

>gb|AY103538.1| Zea mays PCO150589 mRNA sequence
          Length = 2534

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 553  tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 600
            |||||| ||||  ||||| |||||||| ||||||| ||||||||||||
Sbjct: 1968 tgctcgagtccctcagggcctgtgccttcatgatcctctccatgttgg 1921



to top

>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE
          Length = 165916

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 572   ctgtgcctgcatgatcttctccatgttggaactccatccatact 615
             |||||||| ||||||| |||||||||||| | |||| |||||||
Sbjct: 33488 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 33445



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 572   ctgtgcctgcatgatcttctccatgttggaactccatccatact 615
             |||||||| ||||||| |||||||||||| | |||| |||||||
Sbjct: 22847 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 22804



to top

>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete
            cds
          Length = 2625

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 566  cagggtctgtgcctgcatgatcttctccatgttgg 600
            ||||| |||||||| ||||||| ||||||||||||
Sbjct: 1909 cagggcctgtgccttcatgatcctctccatgttgg 1875



to top

>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds
          Length = 2397

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 553  tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccat 612
            |||||| ||||  ||||| ||| |||| ||||||| |||||||||||| | |||| ||||
Sbjct: 1898 tgctcgtgtccctcagggcctgggccttcatgatcctctccatgttggcagtccagccat 1839

               
Query: 613  act 615
            |||
Sbjct: 1838 act 1836



to top

>gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock protein 90 gene,
            partial cds
          Length = 2391

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 485  gagctccttgatgatggggtgccgggggttgatctcca 522
            |||||||||||||||||||||   |||||||| |||||
Sbjct: 2154 gagctccttgatgatggggtgagaggggttgagctcca 2117



to top

>gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA
          Length = 1210

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 486 agctccttgatgatggggtgccgggggttgatctccag 523
           |||| ||||||||||||||||   ||||||||||||||
Sbjct: 910 agcttcttgatgatggggtgctttgggttgatctccag 873



to top

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 162     atttctttctaatgaaatgaaa 183
               ||||||||||||||||||||||
Sbjct: 1261169 atttctttctaatgaaatgaaa 1261148



to top

>ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1), mRNA
          Length = 2478

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 486  agctccttgatgatggggtgccgggggttgatctccag 523
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2197 agcttcttgatgatggggtgctttgggttgatctccag 2160



to top

>gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock protein 90 (HSP-90)
            gene, partial cds
          Length = 1873

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 486  agctccttgatgatggggtgccgggggttgatctccag 523
            |||||||||||||||| ||| |  ||||||||||||||
Sbjct: 1740 agctccttgatgatggcgtggctcgggttgatctccag 1703



to top

>gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related protein TRAP1 mRNA, complete
            cds
          Length = 2162

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 486  agctccttgatgatggggtgccgggggttgatctccag 523
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2000 agcttcttgatgatggggtgctttgggttgatctccag 1963



to top

>gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA
          Length = 2475

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 486  agctccttgatgatggggtgccgggggttgatctccag 523
            |||| ||||||||||||||||   ||||||||||||||
Sbjct: 2193 agcttcttgatgatggggtgctttgggttgatctccag 2156



to top

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 242     ctcctccgcctcctgcttggcc 263
               ||||||||||||||||||||||
Sbjct: 2035901 ctcctccgcctcctgcttggcc 2035922



to top

>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence
          Length = 2179

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 572  ctgtgcctgcatgatcttctccatgttgg 600
            |||||||| ||||||| ||||||||||||
Sbjct: 1704 ctgtgccttcatgatcctctccatgttgg 1676



to top

>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence
          Length = 241834

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 598    tggaactccatccatacttgg 618
              |||||||||||||||||||||
Sbjct: 152955 tggaactccatccatacttgg 152935



to top

>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 170     ctaatgaaatgaaagctaaat 190
               |||||||||||||||||||||
Sbjct: 1421262 ctaatgaaatgaaagctaaat 1421242



to top

>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11
          Length = 346357

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 373    agtccttggggtccggcaggt 393
              |||||||||||||||||||||
Sbjct: 266763 agtccttggggtccggcaggt 266743



to top

>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222553

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 168    ttctaatgaaatgaaagctaa 188
              |||||||||||||||||||||
Sbjct: 112594 ttctaatgaaatgaaagctaa 112614



to top

>ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense (Dlx6as) on chromosome
            6
          Length = 1351

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 240  ggctcctccgcctcctgcttg 260
            |||||||||||||||||||||
Sbjct: 1084 ggctcctccgcctcctgcttg 1064



to top

>ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 (ENSANGG00000003636),
            partial mRNA
          Length = 3264

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 244  cctccgcctcctgcttggccg 264
            |||||||||||||||||||||
Sbjct: 1432 cctccgcctcctgcttggccg 1412



to top

>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence
          Length = 183177

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 139    aaccatcacatttccagtcca 159
              |||||||||||||||||||||
Sbjct: 132650 aaccatcacatttccagtcca 132630



to top

>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence
          Length = 1267

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 572 ctgtgcctgcatgatcttctccatgttgg 600
           |||||||| ||||||| ||||||||||||
Sbjct: 687 ctgtgccttcatgatcctctccatgttgg 659



to top

>gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partial sequence
          Length = 1351

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 240  ggctcctccgcctcctgcttg 260
            |||||||||||||||||||||
Sbjct: 1084 ggctcctccgcctcctgcttg 1064



to top

>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence
          Length = 211740

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    ggctcctccgcctcctgcttg 260
              |||||||||||||||||||||
Sbjct: 107299 ggctcctccgcctcctgcttg 107319



to top

>gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end
          Length = 1496

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 450 ccctcgctgtcgctgtcctgg 470
           |||||||||||||||||||||
Sbjct: 349 ccctcgctgtcgctgtcctgg 329



to top

>gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome 12, complete sequence
          Length = 199499

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 598   tggaactccatccatacttgg 618
             |||||||||||||||||||||
Sbjct: 49214 tggaactccatccatacttgg 49234



to top

>gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 mRNA, 3' end
          Length = 2197

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 490  ccttgatgatggggtgccgggggttgatctcca 522
            |||||||||||||||| | |||||||| |||||
Sbjct: 1105 ccttgatgatggggtgtctggggttgagctcca 1073



to top

>gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 83 gene, complete cds
          Length = 2106

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 486  agctccttgatgatggggtgccgggggttgatctcca 522
            ||||||||||||||||||||   |||||||| |||||
Sbjct: 1853 agctccttgatgatggggtgtttggggttgagctcca 1817



to top

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 617     ggaggtgaccaccacacagg 636
               ||||||||||||||||||||
Sbjct: 1304504 ggaggtgaccaccacacagg 1304485



to top

>ref|XM_598073.2| PREDICTED: Bos taurus similar to SLIT-ROBO Rho GTPase activating
            protein 2 (srGAP2) (Formin-binding protein 2)
            (LOC519843), partial mRNA
          Length = 2576

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 431  cctcgccgtctgcttcaggccctcgctg 458
            ||||||| |||||||| |||||||||||
Sbjct: 1086 cctcgccatctgcttcgggccctcgctg 1113



to top

>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence
          Length = 176549

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aactaggtacagtagtacat 64
             ||||||||||||||||||||
Sbjct: 13547 aactaggtacagtagtacat 13528



to top

>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence
          Length = 211511

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    tcattaaacaagaaactagg 51
             ||||||||||||||||||||
Sbjct: 83603 tcattaaacaagaaactagg 83584



to top

>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence
          Length = 179362

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     aactaggtacagtagtacat 64
              ||||||||||||||||||||
Sbjct: 148078 aactaggtacagtagtacat 148059



to top

>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a
              novel gene and a CpG island, complete sequence
          Length = 214065

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 440    ctgcttcaggccctcgctgt 459
              ||||||||||||||||||||
Sbjct: 175515 ctgcttcaggccctcgctgt 175534



to top

>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 171236

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   aatgaaatgaaagctaaatg 191
             ||||||||||||||||||||
Sbjct: 60679 aatgaaatgaaagctaaatg 60698



to top

>gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 heat shock protein
            (hsp-83) gene, complete cds
          Length = 3520

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 486  agctccttgatgatggggtg 505
            ||||||||||||||||||||
Sbjct: 2455 agctccttgatgatggggtg 2436



to top

>gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, complete sequence
          Length = 161786

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   ctaatgaaatgaaagctaaatggg 193
             ||||||||| ||||||||||||||
Sbjct: 22238 ctaatgaaaagaaagctaaatggg 22261



to top

>gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FKHR mRNA, partial cds
          Length = 1000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 atctccaggaccctcttgcc 535
           ||||||||||||||||||||
Sbjct: 336 atctccaggaccctcttgcc 317



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 442     gcttcaggccctcgctgtcg 461
               ||||||||||||||||||||
Sbjct: 9004724 gcttcaggccctcgctgtcg 9004705



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 442     gcttcaggccctcgctgtcg 461
               ||||||||||||||||||||
Sbjct: 5172865 gcttcaggccctcgctgtcg 5172884



to top

>ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (Foxo1a), mRNA
          Length = 4171

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 516  atctccaggaccctcttgcc 535
            ||||||||||||||||||||
Sbjct: 1259 atctccaggaccctcttgcc 1240



to top

>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 237   tccggctcctccgcctcctgcttggccg 264
             ||||||||||||||||||| ||| ||||
Sbjct: 48116 tccggctcctccgcctcctccttcgccg 48143



to top

>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 237    tccggctcctccgcctcctgcttggccg 264
              ||||||||||||||||||| ||| ||||
Sbjct: 127670 tccggctcctccgcctcctccttcgccg 127697



to top

>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence
          Length = 174952

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   ctaatgaaatgaaagctaaa 189
             ||||||||||||||||||||
Sbjct: 56061 ctaatgaaatgaaagctaaa 56080



to top

>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   catttccagtccaacatttc 166
             ||||||||||||||||||||
Sbjct: 21017 catttccagtccaacatttc 21036



to top

>dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-619A14, complete
             sequence
          Length = 126000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   ggggctcaggtccaggctct 342
             ||||||||||||||||||||
Sbjct: 18841 ggggctcaggtccaggctct 18822



to top

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 242     ctcctccgcctcctgcttgg 261
               ||||||||||||||||||||
Sbjct: 1682827 ctcctccgcctcctgcttgg 1682846



to top

>emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chromosome 4, complete
             sequence
          Length = 190179

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aactaggtacagtagtacat 64
             ||||||||||||||||||||
Sbjct: 70193 aactaggtacagtagtacat 70212



to top

>dbj|AB022081.1| Brassica rapa DNA for ORF-c, complete cds
          Length = 573

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 586 tcttctccatgttggaactc 605
           ||||||||||||||||||||
Sbjct: 401 tcttctccatgttggaactc 382



to top

>dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, complete cds
          Length = 4219

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 513 ttgatctccaggaccctcttgccg 536
           |||| |||||||||||||||||||
Sbjct: 485 ttgagctccaggaccctcttgccg 462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,564,379
Number of Sequences: 3902068
Number of extensions: 4564379
Number of successful extensions: 105332
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104946
Number of HSP's gapped (non-prelim): 386
length of query: 667
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 644
effective length of database: 17,143,297,704
effective search space: 11040283721376
effective search space used: 11040283721376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top