| Clone Name | rbags17d10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | IF3A_ARATH (Q9LD55) Eukaryotic translation initiation factor 3 s... | 30 | 2.3 | 2 | CS015_MACFA (Q4R6B2) Protein C19orf15 homolog precursor | 29 | 5.0 | 3 | CS015_HUMAN (Q6ZRH7) Protein C19orf15 precursor | 29 | 5.0 |
|---|
>IF3A_ARATH (Q9LD55) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3| theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (p114) Length = 987 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +3 Query: 159 KLETLMRREKENV*AGANQQPQRSPEPPSFTI--TKRPAFVSSSSCTACTRMPK*FFKST 332 +LE RRE+E + G N P R EP + T A +++ A +PK ++T Sbjct: 846 ELEEKSRREREELLRGTNAPPARLAEPTVTPVGTTAPAAAAAAAGAPAAPYVPKWKRQTT 905 Query: 333 NMPSPSLLSSA 365 + PS +S+ Sbjct: 906 EVSGPSAPTSS 916
>CS015_MACFA (Q4R6B2) Protein C19orf15 homolog precursor| Length = 1159 Score = 29.3 bits (64), Expect = 5.0 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +1 Query: 64 CNY*LTFLLFLHGVP 108 CNY LTFLL +HG+P Sbjct: 1046 CNYQLTFLLHIHGLP 1060
>CS015_HUMAN (Q6ZRH7) Protein C19orf15 precursor| Length = 1159 Score = 29.3 bits (64), Expect = 5.0 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +1 Query: 64 CNY*LTFLLFLHGVP 108 CNY LTFLL +HG+P Sbjct: 1046 CNYQLTFLLHIHGLP 1060 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,047,950 Number of Sequences: 219361 Number of extensions: 899615 Number of successful extensions: 2159 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2159 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)