| Clone Name | rbags17d09 |
|---|---|
| Clone Library Name | barley_pub |
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 82.0 bits (201), Expect = 1e-15 Identities = 35/49 (71%), Positives = 41/49 (83%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN++L+GQ LSF+VT+SDGRTV S AAPAGW +GQTF G QF Sbjct: 200 WGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 248
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 80.5 bits (197), Expect = 3e-15 Identities = 35/49 (71%), Positives = 38/49 (77%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN L+GQ LSF+VT+SDGRTV SN APA W FGQTF G QF Sbjct: 199 WGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQF 247
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 79.0 bits (193), Expect = 9e-15 Identities = 35/49 (71%), Positives = 37/49 (75%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSNT+L GQ LSF+VT SDGRTV S P WQFGQTFEG QF Sbjct: 207 WGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 78.6 bits (192), Expect = 1e-14 Identities = 33/48 (68%), Positives = 40/48 (83%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQ 423 WG NWQSN++L+GQ LSF+VT+SDG+T+ SN A AGW FGQTF GAQ Sbjct: 201 WGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQ 248
>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)| (Ath-ExpAlpha-1.11) Length = 253 Score = 78.2 bits (191), Expect = 2e-14 Identities = 31/49 (63%), Positives = 41/49 (83%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN++++ Q LSF+VT+SDGRT+ SN AP+ WQFGQT++G QF Sbjct: 205 WGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 78.2 bits (191), Expect = 2e-14 Identities = 34/49 (69%), Positives = 37/49 (75%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN LDGQ LSF+VT+SDGRTV SN A P W FGQT+ G QF Sbjct: 203 WGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQF 251
>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)| (Ath-ExpAlpha-1.10) Length = 258 Score = 73.6 bits (179), Expect = 4e-13 Identities = 32/49 (65%), Positives = 36/49 (73%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN L GQ LSFRV +SDGR+ TSN AP+ WQFGQT+ G F Sbjct: 208 WGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNF 256
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 71.6 bits (174), Expect = 1e-12 Identities = 34/49 (69%), Positives = 35/49 (71%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN L GQ LSFRVTSSD RT TS AP+ WQFGQTF G F Sbjct: 210 WGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNF 258
>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)| (Ath-ExpAlpha-1.9) Length = 262 Score = 70.5 bits (171), Expect = 3e-12 Identities = 33/49 (67%), Positives = 35/49 (71%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN L GQ LSFRVT+SD R+ TS APA WQFGQTF G F Sbjct: 212 WGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNF 260
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 70.1 bits (170), Expect = 4e-12 Identities = 33/49 (67%), Positives = 36/49 (73%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN+ L GQ LSFRVTSSD R+ TS APA W+FGQTF G F Sbjct: 207 WGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNF 255
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 68.9 bits (167), Expect = 9e-12 Identities = 32/49 (65%), Positives = 33/49 (67%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN L GQ LSFRVT SD RT TS P+ WQFGQTF G F Sbjct: 207 WGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNF 255
>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)| (Ath-ExpAlpha-1.4) Length = 255 Score = 68.6 bits (166), Expect = 1e-11 Identities = 30/49 (61%), Positives = 36/49 (73%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NWQSN++L+GQ LSF VT+SD R+V S AP W FGQT+ G QF Sbjct: 205 WGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQF 253
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 63.9 bits (154), Expect = 3e-10 Identities = 29/49 (59%), Positives = 31/49 (63%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NW N L Q LSF VTSSD TVTS +P W +GQTFEG QF Sbjct: 215 WGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQF 263
>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)| (Ath-ExpAlpha-1.23) Length = 256 Score = 58.2 bits (139), Expect = 2e-08 Identities = 25/49 (51%), Positives = 31/49 (63%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 420 WG NW S+ L GQ LSF VT G+T+ S AP W+FG T++G QF Sbjct: 206 WGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQF 254
>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)| (Ath-ExpAlpha-1.14) Length = 252 Score = 58.2 bits (139), Expect = 2e-08 Identities = 23/44 (52%), Positives = 29/44 (65%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTF 435 WG NWQSN +LDGQ LSF +T++DG T P+ W FGQ + Sbjct: 203 WGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIY 246
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 57.0 bits (136), Expect = 4e-08 Identities = 25/46 (54%), Positives = 29/46 (63%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEG 429 WG NW +N L GQ +S RVT+SDG T PA W FGQTF+G Sbjct: 207 WGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDG 252
>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)| (AtEx25) (Ath-ExpAlpha-1.18) Length = 276 Score = 56.6 bits (135), Expect = 5e-08 Identities = 25/46 (54%), Positives = 29/46 (63%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEG 429 WG NW + L GQ +SFRVT+SDG T N P W FGQTF+G Sbjct: 227 WGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 272
>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)| (Ath-ExpAlpha-1.17) Length = 269 Score = 56.6 bits (135), Expect = 5e-08 Identities = 25/46 (54%), Positives = 29/46 (63%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEG 429 WG NW + L GQ +SFRVT+SDG T N P W FGQTF+G Sbjct: 220 WGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 265
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 55.8 bits (133), Expect = 8e-08 Identities = 25/46 (54%), Positives = 30/46 (65%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEG 429 WG NW ++T L GQ LSFRVT++DG T P W FGQTF+G Sbjct: 230 WGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDG 275
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 55.5 bits (132), Expect = 1e-07 Identities = 26/46 (56%), Positives = 29/46 (63%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEG 429 WG NW + T L GQ LSFRVT+SDG T P W FGQTF+G Sbjct: 224 WGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDG 269
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 55.5 bits (132), Expect = 1e-07 Identities = 23/45 (51%), Positives = 32/45 (71%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFE 432 WG N+QSNT+L+GQ LSF+V SDG + P+ W+FGQ+F+ Sbjct: 206 WGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQSFK 250
>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)| (Expansin S2) (Ath-ExpAlpha-1.24) Length = 252 Score = 54.3 bits (129), Expect = 2e-07 Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 2/51 (3%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTF--EGAQF 420 WG NWQS+ L GQ LSF+VT +D +T T P+ W FGQTF G QF Sbjct: 201 WGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQF-GQTFEG 429 WG W + L GQCLSFR+T+SDG P W+ GQ+F+G Sbjct: 262 WGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDWKCNGQSFDG 308
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTS-SDGRTVTSNAAAPAGWQFGQTFE 432 WG ++Q+ + L GQ LSFRVTS + G T+ + APA W G+T++ Sbjct: 211 WGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTYK 256
>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)| (Ath-ExpAlpha-1.25) Length = 257 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 566 WGMNWQSNTFLDGQCLSFRVTSSDGR-TVTSNAAAPAGWQFGQTFE 432 WG ++Q+ + L GQ LSFR+TS R T+ + AAPA W G+T++ Sbjct: 206 WGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTYQ 251
>IF3A_ARATH (Q9LD55) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3| theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (p114) Length = 987 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +1 Query: 166 KLETLMRREKENV*AGANQQPQRSPEPPSFTI--TKRPAFVSSSSCTACTRMPK*FFKST 339 +LE RRE+E + G N P R EP + T A +++ A +PK ++T Sbjct: 846 ELEEKSRREREELLRGTNAPPARLAEPTVTPVGTTAPAAAAAAAGAPAAPYVPKWKRQTT 905 Query: 340 NMPSPSLLSSA 372 + PS +S+ Sbjct: 906 EVSGPSAPTSS 916
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 29.6 bits (65), Expect = 6.2 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = -2 Query: 566 WGMNWQSNTFLDGQC-LSFRVTSSD-GRTVTSNAAAPAGWQFGQTFE 432 WG W+ + + LS RVTS + G+TV ++ PA WQ G ++ Sbjct: 222 WGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYK 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,018,372 Number of Sequences: 219361 Number of extensions: 1027951 Number of successful extensions: 2728 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2726 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)