ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16o08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 3e-52
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
3dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
4dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
5gb|AF154643.1| Nicotiana tabacum clone PR19 mRNA sequence 74 6e-10
6ref|XM_481456.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-08
7dbj|AK063295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
8ref|NM_104128.2| Arabidopsis thaliana ATMMH-1 (FORMAMIDOPYRIMIDI... 64 6e-07
9emb|BX816179.1|CNS0ABR0 Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
10gb|AF099970.1| Arabidopsis thaliana putative formamidopyrimidine... 64 6e-07
11ref|NM_179467.1| Arabidopsis thaliana ATMMH-1 (FORMAMIDOPYRIMIDI... 60 1e-05
12gb|AF099971.1| Arabidopsis thaliana putative formamidopyrimidine... 54 6e-04
13gb|CP000302.1| Shewanella denitrificans OS217, complete genome 46 0.15
14emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chro... 44 0.58
15gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
16gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
17gb|AC100817.5| Homo sapiens chromosome 8, clone RP11-936G2, comp... 42 2.3
18emb|BX323794.17| Zebrafish DNA sequence from clone CH211-247C16 ... 42 2.3
19gb|AC091646.6| Homo sapiens chromosome 18, clone RP11-433A23, co... 42 2.3
20gb|AC096865.2| Homo sapiens chromosome 18 clone RP11-600G22, com... 42 2.3
21gb|AC010493.6|AC010493 Homo sapiens chromosome 5 clone CTD-2347I... 42 2.3
22dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
24gb|AC005674.11|AC005674 Homo sapiens chromosome 4 clone RP11-448... 42 2.3
25gb|AC108199.5| Homo sapiens BAC clone RP13-560N11 from 4, comple... 42 2.3
26gb|U18778.1|SCE9537 Saccharomyces cerevisiae chromosome V cosmid... 42 2.3
27dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
28dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
29dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
30dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
31gb|AC156582.2| Glomus intraradices clone JGIAHZS-13A23, complete... 42 2.3
32gb|AC155288.3| Mus musculus 6 BAC RP24-176C17 (Roswell Park Canc... 42 2.3
33gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 42 2.3
34gb|L04268.1|YSCGCD11NR Saccharomyces cerevisiae negative regulat... 42 2.3
35ref|NM_121999.3| Arabidopsis thaliana nucleotide binding AT5G199... 40 9.0
36ref|XM_631353.1| Dictyostelium discoideum hypothetical protein (... 40 9.0
37ref|XM_467580.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.0
38gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 9.0
39gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-... 40 9.0
40gb|AC131107.3| Mus musculus BAC clone RP23-339P15 from chromosom... 40 9.0
41gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chrom... 40 9.0
42gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.0
43gb|BC012971.1| Mus musculus signal sequence receptor, delta, mRN... 40 9.0
44gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome... 40 9.0
45gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, comp... 40 9.0
46gb|AC134452.4| Mus musculus BAC clone RP24-252M6 from chromosome... 40 9.0
47gb|AC122049.2| Mus musculus BAC clone RP24-456N19 from 16, compl... 40 9.0
48ref|XM_760781.1| Theileria parva strain Muguga chromosome 1 hypo... 40 9.0
49ref|XM_665389.1| Plasmodium berghei strain ANKA hypothetical pro... 40 9.0
50emb|AJ970307.1| Cucumis sativus chloroplast complete genome 40 9.0
51emb|AL355586.27| Human DNA sequence from clone RP11-59I9 on chro... 40 9.0
52emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o... 40 9.0
53dbj|AB086425.1| Pyrus communis PcGAL3 mRNA for pear beta-galacto... 40 9.0
54gb|AC098970.2| Homo sapiens chromosome 3 clone RP11-30G4, comple... 40 9.0
55gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
56gb|AC093560.2| Homo sapiens chromosome 1 clone RP11-398H19, comp... 40 9.0
57dbj|AK142600.1| Mus musculus 10 days lactation, adult female mam... 40 9.0
58gb|AC011260.8| Homo sapiens, clone RP11-1E21, complete sequence 40 9.0
59gb|AC162374.4| Mus musculus BAC clone RP24-370I14 from chromosom... 40 9.0
60ref|XM_627407.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 9.0
61gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genom... 40 9.0
62dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
63dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
64dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 9.0
65dbj|AB190363.1| Pyrus pyrifolia PpGAL2 mRNA for beta-D-galactosi... 40 9.0
66gb|BT005936.1| Arabidopsis thaliana At5g19920 gene, complete cds 40 9.0
67gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16 40 9.0
68dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
69dbj|AK118414.1| Arabidopsis thaliana At5g19920 mRNA for putative... 40 9.0
70dbj|AB010690.1| Arabidopsis thaliana mutM homologue gene, comple... 40 9.0
71emb|Y12792.1|BLRRNA16S B.lactofermentum 16S rRNA gene 40 9.0
72dbj|AK069154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.0
73emb|BX323886.7| Zebrafish DNA sequence from clone CH211-127B11 i... 40 9.0
74gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 se... 40 9.0
75emb|CT573051.1| Medicago truncatula chromosome 5 clone mth2-15e1... 40 9.0
76gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 9.0
77gb|BC089882.1| Rattus norvegicus similar to 2410024A21Rik protei... 40 9.0
78gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 9.0
79gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 9.0
80gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
81emb|BX004781.7| Zebrafish DNA sequence from clone CH211-149G8 in... 40 9.0
82ref|XM_674656.1| Plasmodium berghei strain ANKA splicing factor ... 40 9.0
83emb|AL929246.7| Mouse DNA sequence from clone RP23-34J8 on chrom... 40 9.0
84emb|AL672094.11| Mouse DNA sequence from clone RP23-373N8 on chr... 40 9.0
85emb|AJ296970.1|MMU296970 Mus musculus SDS-stable vimentin-bound ... 40 9.0 
>dbj|AK065376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013005H14, full
           insert sequence
          Length = 1650

 Score =  214 bits (108), Expect = 3e-52
 Identities = 163/180 (90%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 482 ccagtcagcttctgcagttctggcacataggctgtggtcctgccaccagctgttatgaat 541
           ||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 878 ccagtcagcttctgcagttgtggcacgtatgctgtagtcctgccaccagctgttatgaac 819

                                                                       
Query: 542 tcaattttctttccatcgactttaccaggcttcttgccccagcgatgatgaaacaaccat 601
           |||||||||| ||||| |||||||||||||||||||||||| || ||||| || ||||||
Sbjct: 818 tcaattttctgtccattgactttaccaggcttcttgccccatcggtgatggaataaccat 759

                                                                       
Query: 602 tccacaggaaagcgatcacaattcagcgtcaacatcgacagcatatttcacaacctcttg 661
           |||||||||||||  |||||| ||||| ||||| || |||||||||||||||||||||||
Sbjct: 758 tccacaggaaagcagtcacaa-tcagcatcaacttcaacagcatatttcacaacctcttg 700
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  111 bits (56), Expect = 3e-21
 Identities = 93/104 (89%), Gaps = 1/104 (0%)
 Strand = Plus / Plus

                                                                            
Query: 554      ccatcgactttaccaggcttcttgccccagcgatgatgaaacaaccattccacaggaaag 613
                |||| |||||||||||||||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 25847282 ccattgactttaccaggcttcttgccccatcggtgatggaataaccattccacaggaaag 25847341

                                                            
Query: 614      cgatcacaattcagcgtcaacatcgacagcatatttcacaacct 657
                |  |||||| ||||| ||||| || |||||||||||||||||||
Sbjct: 25847342 cagtcacaa-tcagcatcaacttcaacagcatatttcacaacct 25847384



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 520      cctgccaccagctgttatgaattcaattttct 551
                ||||||||||||||||||||| ||||||||||
Sbjct: 25847105 cctgccaccagctgttatgaactcaattttct 25847136



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 482      ccagtcagcttctgcagttctggcacataggctgt 516
                ||||||||||||||||||| |||||| || |||||
Sbjct: 25846977 ccagtcagcttctgcagttgtggcacgtatgctgt 25847011
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>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0017B12
          Length = 157424

 Score =  111 bits (56), Expect = 3e-21
 Identities = 93/104 (89%), Gaps = 1/104 (0%)
 Strand = Plus / Plus

                                                                        
Query: 554  ccatcgactttaccaggcttcttgccccagcgatgatgaaacaaccattccacaggaaag 613
            |||| |||||||||||||||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 2380 ccattgactttaccaggcttcttgccccatcggtgatggaataaccattccacaggaaag 2439

                                                        
Query: 614  cgatcacaattcagcgtcaacatcgacagcatatttcacaacct 657
            |  |||||| ||||| ||||| || |||||||||||||||||||
Sbjct: 2440 cagtcacaa-tcagcatcaacttcaacagcatatttcacaacct 2482



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 520  cctgccaccagctgttatgaattcaattttct 551
            ||||||||||||||||||||| ||||||||||
Sbjct: 2203 cctgccaccagctgttatgaactcaattttct 2234



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 482  ccagtcagcttctgcagttctggcacataggctgt 516
            ||||||||||||||||||| |||||| || |||||
Sbjct: 2075 ccagtcagcttctgcagttgtggcacgtatgctgt 2109
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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0416A11
          Length = 171519

 Score =  111 bits (56), Expect = 3e-21
 Identities = 93/104 (89%), Gaps = 1/104 (0%)
 Strand = Plus / Plus

                                                                          
Query: 554    ccatcgactttaccaggcttcttgccccagcgatgatgaaacaaccattccacaggaaag 613
              |||| |||||||||||||||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 129486 ccattgactttaccaggcttcttgccccatcggtgatggaataaccattccacaggaaag 129545

                                                          
Query: 614    cgatcacaattcagcgtcaacatcgacagcatatttcacaacct 657
              |  |||||| ||||| ||||| || |||||||||||||||||||
Sbjct: 129546 cagtcacaa-tcagcatcaacttcaacagcatatttcacaacct 129588



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 520    cctgccaccagctgttatgaattcaattttct 551
              ||||||||||||||||||||| ||||||||||
Sbjct: 129309 cctgccaccagctgttatgaactcaattttct 129340



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 482    ccagtcagcttctgcagttctggcacataggctgt 516
              ||||||||||||||||||| |||||| || |||||
Sbjct: 129181 ccagtcagcttctgcagttgtggcacgtatgctgt 129215
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>gb|AF154643.1| Nicotiana tabacum clone PR19 mRNA sequence
          Length = 1035

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 503 ggcacataggctgtggtcctgccaccagctgttatgaattcaattttctttccatcgact 562
           |||||| ||||||  |||||||||||||| || || || || |||||||| ||||  |||
Sbjct: 587 ggcacaaaggctgaagtcctgccaccagccgtgataaactctattttcttcccattaact 528

                                                    
Query: 563 ttaccaggcttcttgccccagcgatgatgaaacaaccattc 603
           || |||||||| |||||||| || | |||||||||||||||
Sbjct: 527 tttccaggctttttgccccatcggtaatgaaacaaccattc 487
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>ref|XM_481456.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 909

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                       
Query: 487 cagcttctgcagttctggcacataggctgtggtcctgccaccagctgttatgaattcaat 546
           |||||||||||  ||||||||||| ||||  |||||||||||| |||| ||||| |||||
Sbjct: 495 cagcttctgcaactctggcacatatgctgaagtcctgccaccaactgtaatgaagtcaat 436

                 
Query: 547 tttctt 552
           ||||||
Sbjct: 435 tttctt 430
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>dbj|AK063295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-E09, full
           insert sequence
          Length = 1574

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                       
Query: 487 cagcttctgcagttctggcacataggctgtggtcctgccaccagctgttatgaattcaat 546
           |||||||||||  ||||||||||| ||||  |||||||||||| |||| ||||| |||||
Sbjct: 831 cagcttctgcaactctggcacatatgctgaagtcctgccaccaactgtaatgaagtcaat 772

                 
Query: 547 tttctt 552
           ||||||
Sbjct: 771 tttctt 766
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>ref|NM_104128.2| Arabidopsis thaliana ATMMH-1 (FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
           1) AT1G52500 (ATMMH-1) transcript variant AT1G52500.2
           mRNA, complete cds
          Length = 1491

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 491 ttctgcagttctggcacataggctgtggtcctgccaccagctgttatgaattcaattttc 550
           |||||||||||||| ||||| ||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 890 ttctgcagttctggaacataagctgttgtccttccaccagcagtaatgaaatcaatcttc 831

                   
Query: 551 tttccatc 558
           || |||||
Sbjct: 830 ttcccatc 823
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>emb|BX816179.1|CNS0ABR0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH32ZD06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1444

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 491 ttctgcagttctggcacataggctgtggtcctgccaccagctgttatgaattcaattttc 550
           |||||||||||||| ||||| ||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 881 ttctgcagttctggaacataagctgttgtccttccaccagcagtaatgaaatcaatcttc 822

                   
Query: 551 tttccatc 558
           || |||||
Sbjct: 821 ttcccatc 814
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>gb|AF099970.1| Arabidopsis thaliana putative formamidopyrimidine-DNA glycosylase 1
           (fpg1) mRNA, complete cds
          Length = 1481

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 491 ttctgcagttctggcacataggctgtggtcctgccaccagctgttatgaattcaattttc 550
           |||||||||||||| ||||| ||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 880 ttctgcagttctggaacataagctgttgtccttccaccagcagtaatgaaatcaatcttc 821

                   
Query: 551 tttccatc 558
           || |||||
Sbjct: 820 ttcccatc 813
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>ref|NM_179467.1| Arabidopsis thaliana ATMMH-1 (FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1)
            AT1G52500 (ATMMH-1) transcript variant AT1G52500.1 mRNA,
            complete cds
          Length = 1701

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 491  ttctgcagttctggcacataggctgtggtcctgccaccagctgttatgaattcaattttc 550
            |||||||||||||| ||||| ||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 1240 ttctgcagttctggaacataagctgttgtccttccaccagcagtaatgaaatcaatcttc 1181

              
Query: 551  tt 552
            ||
Sbjct: 1180 tt 1179



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 589 atgaaacaaccattccacaggaaa 612
           ||||||||||||||| ||||||||
Sbjct: 789 atgaaacaaccattcaacaggaaa 766
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>gb|AF099971.1| Arabidopsis thaliana putative formamidopyrimidine-DNA glycosylase 2
            (fpg2) mRNA, complete cds
          Length = 1294

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 491  ttctgcagttctggcacataggctgtggtcctgccaccagctgttatgaattcaattttc 550
            |||||||||| ||| ||||| ||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 1230 ttctgcagttntggaacataagctgttgtccttccaccagcagtaatgaaatcaatcttc 1171

              
Query: 551  tt 552
            ||
Sbjct: 1170 tt 1169



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 589 atgaaacaaccattccacaggaaa 612
           ||||||||||||||| ||||||||
Sbjct: 779 atgaaacaaccattcaacaggaaa 756
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 385     tcagcttctacttctacttctgc 407
               |||||||||||||||||||||||
Sbjct: 1721848 tcagcttctacttctacttctgc 1721826
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>emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chromosome X, complete
              sequence
          Length = 150122

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 376    aaatcatcatcagcttctacttctacttct 405
              |||||||||||| ||||| |||||||||||
Sbjct: 112677 aaatcatcatcatcttcttcttctacttct 112706
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>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 520   cctgccaccagctgttatgaattcaattttctt 552
             |||||||||| |||| ||||| |||||||||||
Sbjct: 28928 cctgccaccaactgtaatgaagtcaattttctt 28960
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 520   cctgccaccagctgttatgaattcaattttctt 552
             |||||||||| |||| ||||| |||||||||||
Sbjct: 48007 cctgccaccaactgtaatgaagtcaattttctt 47975
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>gb|AC100817.5| Homo sapiens chromosome 8, clone RP11-936G2, complete sequence
          Length = 152388

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    tttcttttatcttcttccaga 88
             |||||||||||||||||||||
Sbjct: 79810 tttcttttatcttcttccaga 79790
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>emb|BX323794.17| Zebrafish DNA sequence from clone CH211-247C16 in linkage group 17,
             complete sequence
          Length = 91210

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 232   acatcatctttgctgccatgt 252
             |||||||||||||||||||||
Sbjct: 68423 acatcatctttgctgccatgt 68403
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>gb|AC091646.6| Homo sapiens chromosome 18, clone RP11-433A23, complete sequence
          Length = 187755

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     aatgtatataaaacacataac 24
             |||||||||||||||||||||
Sbjct: 39469 aatgtatataaaacacataac 39489
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>gb|AC096865.2| Homo sapiens chromosome 18 clone RP11-600G22, complete sequence
          Length = 194277

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      aatgtatataaaacacataac 24
              |||||||||||||||||||||
Sbjct: 167190 aatgtatataaaacacataac 167170
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>gb|AC010493.6|AC010493 Homo sapiens chromosome 5 clone CTD-2347I17, complete sequence
          Length = 93862

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 475   tgggtccccagtcagcttctg 495
             |||||||||||||||||||||
Sbjct: 63027 tgggtccccagtcagcttctg 63007
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 520      cctgccaccagctgttatgaattcaattttctt 552
                |||||||||| |||| ||||| |||||||||||
Sbjct: 12710828 cctgccaccaactgtaatgaagtcaattttctt 12710796
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 247      ccatgtttaatgcttggtttc 267
                |||||||||||||||||||||
Sbjct: 30135551 ccatgtttaatgcttggtttc 30135531



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 418      ttggcatcaccatcctcgct 437
                ||||||||||||||||||||
Sbjct: 30281726 ttggcatcaccatcctcgct 30281745
to top
>gb|AC005674.11|AC005674 Homo sapiens chromosome 4 clone RP11-448G15, complete sequence
          Length = 199450

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 355   ggcactctctttcttggcttc 375
             |||||||||||||||||||||
Sbjct: 66524 ggcactctctttcttggcttc 66504
to top
>gb|AC108199.5| Homo sapiens BAC clone RP13-560N11 from 4, complete sequence
          Length = 91042

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 355   ggcactctctttcttggcttc 375
             |||||||||||||||||||||
Sbjct: 68708 ggcactctctttcttggcttc 68688
to top
>gb|U18778.1|SCE9537 Saccharomyces cerevisiae chromosome V cosmids 9537, 9581, 9495, 9867,
             and lambda clone 5898
          Length = 66030

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    ccaacatactctacactaaat 44
             |||||||||||||||||||||
Sbjct: 55313 ccaacatactctacactaaat 55333
to top
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0685G12
          Length = 149155

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 247    ccatgtttaatgcttggtttc 267
              |||||||||||||||||||||
Sbjct: 115148 ccatgtttaatgcttggtttc 115128
to top
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1124_G07
          Length = 93240

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 247  ccatgtttaatgcttggtttc 267
            |||||||||||||||||||||
Sbjct: 8255 ccatgtttaatgcttggtttc 8235
to top
>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 520   cctgccaccagctgttatgaattcaattttctt 552
             |||||||||| |||| ||||| |||||||||||
Sbjct: 54823 cctgccaccaactgtaatgaagtcaattttctt 54791
to top
>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0051M20
          Length = 152702

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 520   cctgccaccagctgttatgaattcaattttctt 552
             |||||||||| |||| ||||| |||||||||||
Sbjct: 96797 cctgccaccaactgtaatgaagtcaattttctt 96765
to top
>gb|AC156582.2| Glomus intraradices clone JGIAHZS-13A23, complete sequence
          Length = 32636

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 381   atcatcagcttctacttctacttct 405
             ||||||| |||||||||||||||||
Sbjct: 21708 atcatcatcttctacttctacttct 21684
to top
>gb|AC155288.3| Mus musculus 6 BAC RP24-176C17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 168486

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 385   tcagcttctacttctacttct 405
             |||||||||||||||||||||
Sbjct: 35950 tcagcttctacttctacttct 35930
to top
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 252     tttaatgcttggtttcttctt 272
               |||||||||||||||||||||
Sbjct: 1019802 tttaatgcttggtttcttctt 1019822
to top
>gb|L04268.1|YSCGCD11NR Saccharomyces cerevisiae negative regulator of GCN4 (GCD11) gene,
            complete cds
          Length = 2647

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   ccaacatactctacactaaat 44
            |||||||||||||||||||||
Sbjct: 2431 ccaacatactctacactaaat 2451
to top
>ref|NM_121999.3| Arabidopsis thaliana nucleotide binding AT5G19920 mRNA, complete
           cds
          Length = 2484

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 388 gcttctacttctacttctgcccct 411
           |||||||||||||||||| |||||
Sbjct: 169 gcttctacttctacttcttcccct 146
to top
>ref|XM_631353.1| Dictyostelium discoideum hypothetical protein (DDB0219405), partial
           mRNA
          Length = 802

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 gcttctacttctacttctgc 407
           ||||||||||||||||||||
Sbjct: 760 gcttctacttctacttctgc 741
to top
>ref|XM_467580.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 ttggcatcaccatcctcgct 437
           ||||||||||||||||||||
Sbjct: 218 ttggcatcaccatcctcgct 199
to top
>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete
              sequence
          Length = 251762

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 378    atcatcatcagcttctacttctacttct 405
              |||||||||| ||||| |||||||||||
Sbjct: 149939 atcatcatcatcttcttcttctacttct 149966
to top
>gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-309B4, CT7-567G9,
             MGSPI-15528, MGSPI-15530 complete sequence
          Length = 235497

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   acttctgcccctgcttcctt 419
             ||||||||||||||||||||
Sbjct: 64806 acttctgcccctgcttcctt 64825
to top
>gb|AC131107.3| Mus musculus BAC clone RP23-339P15 from chromosome 8, complete sequence
          Length = 214894

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gcttctacttctacttctgc 407
             ||||||||||||||||||||
Sbjct: 94616 gcttctacttctacttctgc 94597
to top
>gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chromosome 4, complete
              sequence
          Length = 171121

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gcttctacttctacttctgc 407
              ||||||||||||||||||||
Sbjct: 156390 gcttctacttctacttctgc 156371
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 606      caggaaagcgatcacaattcagcg 629
                ||||||||||| ||||||||||||
Sbjct: 30224861 caggaaagcgaccacaattcagcg 30224838
to top
>gb|BC012971.1| Mus musculus signal sequence receptor, delta, mRNA (cDNA clone
            IMAGE:4038523), partial cds
          Length = 2596

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  acttctgcccctgcttcctt 419
            ||||||||||||||||||||
Sbjct: 2246 acttctgcccctgcttcctt 2265
to top
>gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome 15, complete sequence
          Length = 145186

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 592   aaacaaccattccacaggaa 611
             ||||||||||||||||||||
Sbjct: 43411 aaacaaccattccacaggaa 43430
to top
>gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, complete sequence
          Length = 207904

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 592    aaacaaccattccacaggaa 611
              ||||||||||||||||||||
Sbjct: 146582 aaacaaccattccacaggaa 146601
to top
>gb|AC134452.4| Mus musculus BAC clone RP24-252M6 from chromosome 16, complete sequence
          Length = 149607

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 586    atgatgaaacaaccattcca 605
              ||||||||||||||||||||
Sbjct: 140279 atgatgaaacaaccattcca 140260
to top
>gb|AC122049.2| Mus musculus BAC clone RP24-456N19 from 16, complete sequence
          Length = 167576

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 586   atgatgaaacaaccattcca 605
             ||||||||||||||||||||
Sbjct: 81208 atgatgaaacaaccattcca 81227
to top
>ref|XM_760781.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
           (TP01_0347) partial mRNA
          Length = 1176

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 72  ttttatcttcttccagattaatcatttg 99
           ||||||||| ||||| ||||||||||||
Sbjct: 934 ttttatcttgttccatattaatcatttg 907
to top
>ref|XM_665389.1| Plasmodium berghei strain ANKA hypothetical protein (PB405539.00.0)
           partial mRNA
          Length = 537

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 gcttctacttctacttctgc 407
           ||||||||||||||||||||
Sbjct: 119 gcttctacttctacttctgc 100
to top
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 389    cttctacttctacttctgcccctgcttc 416
              ||||||||||||||||| | ||||||||
Sbjct: 129266 cttctacttctacttctactcctgcttc 129239
to top
>emb|AL355586.27| Human DNA sequence from clone RP11-59I9 on chromosome 6q16.3-21 Contains
              two novel genes, the 3' end of the C6orf210 gene for
              chromosome 6 open reading frame 210 and three CpG islands,
              complete sequence
          Length = 185311

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ttaatgcttggtttcttctt 272
              ||||||||||||||||||||
Sbjct: 182582 ttaatgcttggtttcttctt 182601
to top
>emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o15, COMPLETE SEQUENCE
          Length = 124859

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 532   tgttatgaattcaattttct 551
             ||||||||||||||||||||
Sbjct: 82497 tgttatgaattcaattttct 82516
to top
>dbj|AB086425.1| Pyrus communis PcGAL3 mRNA for pear beta-galactosidase3, complete cds
          Length = 3085

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  tttacttgttattttggagg 304
            ||||||||||||||||||||
Sbjct: 2303 tttacttgttattttggagg 2322
to top
>gb|AC098970.2| Homo sapiens chromosome 3 clone RP11-30G4, complete sequence
          Length = 153590

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    tttggtagtctttggtttattctt 119
             |||||| |||||||||||||||||
Sbjct: 95439 tttggtggtctttggtttattctt 95462
to top
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0073D04,
              complete sequence
          Length = 155372

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    attttacttgttattttgga 302
              ||||||||||||||||||||
Sbjct: 111215 attttacttgttattttgga 111196
to top
>gb|AC093560.2| Homo sapiens chromosome 1 clone RP11-398H19, complete sequence
          Length = 199594

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    ttatgaattcaattttcttt 553
              ||||||||||||||||||||
Sbjct: 190853 ttatgaattcaattttcttt 190872
to top
>dbj|AK142600.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
            RIKEN full-length enriched library, clone:D730004K01
            product:signal sequence receptor, delta, full insert
            sequence
          Length = 3686

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  acttctgcccctgcttcctt 419
            ||||||||||||||||||||
Sbjct: 3145 acttctgcccctgcttcctt 3164
to top
>gb|AC011260.8| Homo sapiens, clone RP11-1E21, complete sequence
          Length = 168476

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   ttatgaattcaattttcttt 553
             ||||||||||||||||||||
Sbjct: 56346 ttatgaattcaattttcttt 56365
to top
>gb|AC162374.4| Mus musculus BAC clone RP24-370I14 from chromosome 16, complete
             sequence
          Length = 157491

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 586   atgatgaaacaaccattcca 605
             ||||||||||||||||||||
Sbjct: 62197 atgatgaaacaaccattcca 62178
to top
>ref|XM_627407.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_5290),
           partial mRNA
          Length = 6771

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 64  tgaatttcttttatcttctt 83
           ||||||||||||||||||||
Sbjct: 503 tgaatttcttttatcttctt 484
to top
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
             sequence
          Length = 130359

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 606   caggaaagcgatcacaattcagcg 629
             ||||||||||| ||||||||||||
Sbjct: 16541 caggaaagcgaccacaattcagcg 16518
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 283      attttacttgttattttgga 302
                ||||||||||||||||||||
Sbjct: 14786066 attttacttgttattttgga 14786047
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 606      caggaaagcgatcacaattcagcg 629
                ||||||||||| ||||||||||||
Sbjct: 30316283 caggaaagcgaccacaattcagcg 30316260
to top
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 535     tatgaattcaattttctttccatc 558
               |||||||||||| |||||||||||
Sbjct: 1160304 tatgaattcaatattctttccatc 1160327
to top
>dbj|AB190363.1| Pyrus pyrifolia PpGAL2 mRNA for beta-D-galactosidase, complete cds
          Length = 3079

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  tttacttgttattttggagg 304
            ||||||||||||||||||||
Sbjct: 2294 tttacttgttattttggagg 2313
to top
>gb|BT005936.1| Arabidopsis thaliana At5g19920 gene, complete cds
          Length = 1971

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 388 gcttctacttctacttctgcccct 411
           |||||||||||||||||| |||||
Sbjct: 62  gcttctacttctacttcttcccct 39
to top
>gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16
          Length = 84334

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 388   gcttctacttctacttctgcccct 411
             |||||||||||||||||| |||||
Sbjct: 25936 gcttctacttctacttcttcccct 25959
to top
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1121A12
          Length = 138796

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   ttggcatcaccatcctcgct 437
             ||||||||||||||||||||
Sbjct: 82643 ttggcatcaccatcctcgct 82662
to top
>dbj|AK118414.1| Arabidopsis thaliana At5g19920 mRNA for putative TipD like WD
           repeat protein, complete cds, clone: RAFL19-66-O22
          Length = 2439

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 388 gcttctacttctacttctgcccct 411
           |||||||||||||||||| |||||
Sbjct: 169 gcttctacttctacttcttcccct 146
to top
>dbj|AB010690.1| Arabidopsis thaliana mutM homologue gene, complete cds
          Length = 3921

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 589  atgaaacaaccattccacaggaaa 612
            ||||||||||||||| ||||||||
Sbjct: 2021 atgaaacaaccattcaacaggaaa 1998
to top
>emb|Y12792.1|BLRRNA16S B.lactofermentum 16S rRNA gene
          Length = 2666

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 cttctacttctacttctgcc 408
           ||||||||||||||||||||
Sbjct: 312 cttctacttctacttctgcc 293
to top
>dbj|AK069154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006P21, full
           insert sequence
          Length = 1935

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 ttggcatcaccatcctcgct 437
           ||||||||||||||||||||
Sbjct: 218 ttggcatcaccatcctcgct 199
to top
>emb|BX323886.7| Zebrafish DNA sequence from clone CH211-127B11 in linkage group 4,
             complete sequence
          Length = 158224

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    attaatcatttggtagtctttggt 111
             ||||||||||||| ||||||||||
Sbjct: 60795 attaatcatttggaagtctttggt 60772
to top
>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence
          Length = 117737

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 589   atgaaacaaccattccacaggaaa 612
             ||||||||||||||| ||||||||
Sbjct: 83850 atgaaacaaccattcaacaggaaa 83873
to top
>emb|CT573051.1| Medicago truncatula chromosome 5 clone mth2-15e15, COMPLETE SEQUENCE
          Length = 117939

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 376    aaatcatcatcagcttctacttct 399
              |||||||||||||||||| |||||
Sbjct: 104307 aaatcatcatcagcttcttcttct 104284
to top
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 485     gtcagcttctgcagttctgg 504
               ||||||||||||||||||||
Sbjct: 4463096 gtcagcttctgcagttctgg 4463115
to top
>gb|BC089882.1| Rattus norvegicus similar to 2410024A21Rik protein, mRNA (cDNA clone
            IMAGE:7368501), partial cds
          Length = 2768

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 240  tttgctgccatgtttaatgcttggtttc 267
            |||||||||||||| |||||||| ||||
Sbjct: 2694 tttgctgccatgttgaatgcttgctttc 2721
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     aattttacttgttattttgg 301
               ||||||||||||||||||||
Sbjct: 1965552 aattttacttgttattttgg 1965571
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     aattttacttgttattttgg 301
               ||||||||||||||||||||
Sbjct: 2026956 aattttacttgttattttgg 2026975
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 283      attttacttgttattttgga 302
                ||||||||||||||||||||
Sbjct: 14794307 attttacttgttattttgga 14794288
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>emb|BX004781.7| Zebrafish DNA sequence from clone CH211-149G8 in linkage group 1,
              complete sequence
          Length = 169991

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 4      aatgtatataaaacacataaccaacata 31
              ||||||||||||| ||| ||||||||||
Sbjct: 113307 aatgtatataaaatacaaaaccaacata 113280
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>ref|XM_674656.1| Plasmodium berghei strain ANKA splicing factor (PB001111.01.0),
           partial mRNA
          Length = 864

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 gcttctacttctacttctgc 407
           ||||||||||||||||||||
Sbjct: 627 gcttctacttctacttctgc 608
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>emb|AL929246.7| Mouse DNA sequence from clone RP23-34J8 on chromosome 2, complete
             sequence
          Length = 142905

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aaccaacatacactgaattt 70
             ||||||||||||||||||||
Sbjct: 79728 aaccaacatacactgaattt 79709
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>emb|AL672094.11| Mouse DNA sequence from clone RP23-373N8 on chromosome X, complete
             sequence
          Length = 147138

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   acttctgcccctgcttcctt 419
             ||||||||||||||||||||
Sbjct: 53743 acttctgcccctgcttcctt 53762
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>emb|AJ296970.1|MMU296970 Mus musculus SDS-stable vimentin-bound DNA fragment MEF10VIMA4
          Length = 695

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 586 atgatgaaacaaccattcca 605
           ||||||||||||||||||||
Sbjct: 604 atgatgaaacaaccattcca 585


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,016,091
Number of Sequences: 3902068
Number of extensions: 7016091
Number of successful extensions: 141638
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140921
Number of HSP's gapped (non-prelim): 712
length of query: 661
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 638
effective length of database: 17,143,297,704
effective search space: 10937423935152
effective search space used: 10937423935152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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