ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16n21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_190202.1| Oryza sativa (japonica cultivar-group), predic... 325 1e-85
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 325 1e-85
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 325 1e-85
4dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic D... 325 1e-85
5dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 325 1e-85
6gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 325 1e-85
7dbj|AK106608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 6e-81
8gb|AY105195.1| Zea mays PCO078174 mRNA sequence 157 5e-35
9gb|AY069939.1| Vigna unguiculata formylglycinamide ribonucleotid... 107 4e-20
10gb|AY178839.1| Glycine max phosphoribosylformylglycinamidine syn... 98 4e-17
11ref|XM_448421.1| Candida glabrata CBS138, CAGL0K04499g partial mRNA 44 0.52
12emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 44 0.52
13gb|DQ140322.1| Hepatitis C virus isolate S1 non-structural prote... 44 0.52
14ref|NM_059603.2| Caenorhabditis elegans protein KINase family me... 44 0.52
15dbj|AB054296.2| Oryzias latipes OlGC2 gene for membrane guanylyl... 44 0.52
16gb|AF104455.1| Homo sapiens chromosome 7qtelo BAC F6, complete s... 42 2.1
17ref|XM_744414.1| Aspergillus fumigatus Af293 DNA excision repair... 42 2.1
18gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.2
19ref|XM_706027.1| Candida albicans SC5314 5'-phosphoribosylformyl... 40 8.2
20ref|XM_706010.1| Candida albicans SC5314 5'-phosphoribosylformyl... 40 8.2
21gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 8.2
22gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 8.2
23emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.2
24gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 8.2
25emb|CR378667.1| Photobacterium profundum SS9; segment 5/12 40 8.2
26emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 8.2
27gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete s... 40 8.2
28gb|AC096543.2| Homo sapiens chromosome 1 clone RP11-335E6, compl... 40 8.2
29gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.2
30dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
31ref|NM_211273.1| Eremothecium gossypii AFR371Wp (AFR371W), mRNA 40 8.2
32emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 8.2
33emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 8.2
34gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.2

>ref|NM_190202.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4065

 Score =  325 bits (164), Expect = 1e-85
 Identities = 311/360 (86%)
 Strand = Plus / Minus

                                                                        
Query: 229  aacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttctcaa 288
            ||||||||||||| ||||||||||||||||||| ||| ||||| ||||||| ||||||||
Sbjct: 4060 aacaccattctctggcattctggaacatgcgcagccagggactgggaccacacttctcaa 4001

                                                                        
Query: 289  cctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccgggtgcg 348
             |||||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||||| |
Sbjct: 4000 gctgccattccttgggataccatggatattgccacatcatgaagcaacgctctgggtgtg 3941

                                                                        
Query: 349  gcatcagagcaaggtgccttccattgggggagcaaagggccgcaataccaagcggagagc 408
            |||||| |||||| || |||||||  |||||||||||||| ||||| ||||| |||||||
Sbjct: 3940 gcatcatagcaagatgtcttccatcaggggagcaaagggctgcaatgccaaggggagagc 3881

                                                                        
Query: 409  cattagggttgaaaggatagacctctgtgacgttattagcatcatcgcagtacctcagag 468
            |||| || ||||| || ||||| || || | |||||||||||| || ||||||| || ||
Sbjct: 3880 cattgggattgaacgggtagacttcggtaatgttattagcatcgtcacagtaccgcacag 3821

                                                                        
Query: 469  gggccagattagatttgacaacatcagataagacatttccatctgggaagaaggctctac 528
            | ||||| ||||| || ||||||  || ||  |||||| ||||||||||||| ||||| |
Sbjct: 3820 gagccaggttagagttcacaacactagctagaacattttcatctgggaagaaagctctcc 3761

                                                                        
Query: 529  cttcaccatgagcactccaaatgcccaatgtagagccttccatacctttgaacattatag 588
            | ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 3760 cctcaccatgagcactccaaatgcccagtgtagaaccttccattcctttgaacatgatag 3701



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  325 bits (164), Expect = 1e-85
 Identities = 314/364 (86%)
 Strand = Plus / Minus

                                                                          
Query: 225    tatgaacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttc 284
              ||||||||||||||||| ||||||||||||||||||| ||| || || ||||||||||||
Sbjct: 224454 tatgaacaccattctctagcattctggaacatgcgcagccaggggctgggaccactcttc 224395

                                                                          
Query: 285    tcaacctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccggg 344
              |||| |||||||||||||||| ||||||| |||||||||||||| ||| ||||||| |||
Sbjct: 224394 tcaagctgccaatccttgggagaccatggatattgccacatcatgaagcaacgctctggg 224335

                                                                          
Query: 345    tgcggcatcagagcaaggtgccttccattgggggagcaaagggccgcaataccaagcgga 404
              || ||||||| |||||| || |||||||  |||||||||||||| ||||| ||||| |||
Sbjct: 224334 tgtggcatcatagcaagatgtcttccatcaggggagcaaagggctgcaatgccaagtgga 224275

                                                                          
Query: 405    gagccattagggttgaaaggatagacctctgtgacgttattagcatcatcgcagtacctc 464
              |||||||| || ||||| || ||||| || || | |||||||||||| || ||||||| |
Sbjct: 224274 gagccattgggattgaatgggtagacttcagttatgttattagcatcgtcacagtaccgc 224215

                                                                          
Query: 465    agaggggccagattagatttgacaacatcagataagacatttccatctgggaagaaggct 524
              | ||| ||||| ||||| || ||||||  || ||  |||||| ||||||||||||| |||
Sbjct: 224214 acaggagccaggttagactttacaacactagctagaacattttcatctgggaagaaagct 224155

                                                                          
Query: 525    ctaccttcaccatgagcactccaaatgcccaatgtagagccttccatacctttgaacatt 584
              || || ||||| ||||||||||||||||||| |||||| |||||||| ||||||||||| 
Sbjct: 224154 ctcccctcaccgtgagcactccaaatgcccattgtagaaccttccattcctttgaacatg 224095

                  
Query: 585    atag 588
              ||||
Sbjct: 224094 atag 224091



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  325 bits (164), Expect = 1e-85
 Identities = 311/360 (86%)
 Strand = Plus / Plus

                                                                            
Query: 229      aacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttctcaa 288
                ||||||||||||| ||||||||||||||||||| ||| ||||| ||||||| ||||||||
Sbjct: 38612759 aacaccattctctggcattctggaacatgcgcagccagggactgggaccacacttctcaa 38612818

                                                                            
Query: 289      cctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccgggtgcg 348
                 |||||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||||| |
Sbjct: 38612819 gctgccattccttgggataccatggatattgccacatcatgaagcaacgctctgggtgtg 38612878

                                                                            
Query: 349      gcatcagagcaaggtgccttccattgggggagcaaagggccgcaataccaagcggagagc 408
                |||||| |||||| || |||||||  |||||||||||||| ||||| ||||| |||||||
Sbjct: 38612879 gcatcatagcaagatgtcttccatcaggggagcaaagggctgcaatgccaaggggagagc 38612938

                                                                            
Query: 409      cattagggttgaaaggatagacctctgtgacgttattagcatcatcgcagtacctcagag 468
                |||| || ||||| || ||||| || || | |||||||||||| || ||||||| || ||
Sbjct: 38612939 cattgggattgaacgggtagacttcggtaatgttattagcatcgtcacagtaccgcacag 38612998

                                                                            
Query: 469      gggccagattagatttgacaacatcagataagacatttccatctgggaagaaggctctac 528
                | ||||| ||||| || ||||||  || ||  |||||| ||||||||||||| ||||| |
Sbjct: 38612999 gagccaggttagagttcacaacactagctagaacattttcatctgggaagaaagctctcc 38613058

                                                                            
Query: 529      cttcaccatgagcactccaaatgcccaatgtagagccttccatacctttgaacattatag 588
                | ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 38613059 cctcaccatgagcactccaaatgcccagtgtagaaccttccattcctttgaacatgatag 38613118



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 466      gaggggccagattagatttg 485
                ||||||||||||||||||||
Sbjct: 37526952 gaggggccagattagatttg 37526933



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>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0434C04
          Length = 150064

 Score =  325 bits (164), Expect = 1e-85
 Identities = 311/360 (86%)
 Strand = Plus / Plus

                                                                          
Query: 229    aacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttctcaa 288
              ||||||||||||| ||||||||||||||||||| ||| ||||| ||||||| ||||||||
Sbjct: 133440 aacaccattctctggcattctggaacatgcgcagccagggactgggaccacacttctcaa 133499

                                                                          
Query: 289    cctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccgggtgcg 348
               |||||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||||| |
Sbjct: 133500 gctgccattccttgggataccatggatattgccacatcatgaagcaacgctctgggtgtg 133559

                                                                          
Query: 349    gcatcagagcaaggtgccttccattgggggagcaaagggccgcaataccaagcggagagc 408
              |||||| |||||| || |||||||  |||||||||||||| ||||| ||||| |||||||
Sbjct: 133560 gcatcatagcaagatgtcttccatcaggggagcaaagggctgcaatgccaaggggagagc 133619

                                                                          
Query: 409    cattagggttgaaaggatagacctctgtgacgttattagcatcatcgcagtacctcagag 468
              |||| || ||||| || ||||| || || | |||||||||||| || ||||||| || ||
Sbjct: 133620 cattgggattgaacgggtagacttcggtaatgttattagcatcgtcacagtaccgcacag 133679

                                                                          
Query: 469    gggccagattagatttgacaacatcagataagacatttccatctgggaagaaggctctac 528
              | ||||| ||||| || ||||||  || ||  |||||| ||||||||||||| ||||| |
Sbjct: 133680 gagccaggttagagttcacaacactagctagaacattttcatctgggaagaaagctctcc 133739

                                                                          
Query: 529    cttcaccatgagcactccaaatgcccaatgtagagccttccatacctttgaacattatag 588
              | ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 133740 cctcaccatgagcactccaaatgcccagtgtagaaccttccattcctttgaacatgatag 133799



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>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1099D03
          Length = 191022

 Score =  325 bits (164), Expect = 1e-85
 Identities = 311/360 (86%)
 Strand = Plus / Plus

                                                                         
Query: 229   aacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttctcaa 288
             ||||||||||||| ||||||||||||||||||| ||| ||||| ||||||| ||||||||
Sbjct: 70732 aacaccattctctggcattctggaacatgcgcagccagggactgggaccacacttctcaa 70791

                                                                         
Query: 289   cctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccgggtgcg 348
              |||||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||||| |
Sbjct: 70792 gctgccattccttgggataccatggatattgccacatcatgaagcaacgctctgggtgtg 70851

                                                                         
Query: 349   gcatcagagcaaggtgccttccattgggggagcaaagggccgcaataccaagcggagagc 408
             |||||| |||||| || |||||||  |||||||||||||| ||||| ||||| |||||||
Sbjct: 70852 gcatcatagcaagatgtcttccatcaggggagcaaagggctgcaatgccaaggggagagc 70911

                                                                         
Query: 409   cattagggttgaaaggatagacctctgtgacgttattagcatcatcgcagtacctcagag 468
             |||| || ||||| || ||||| || || | |||||||||||| || ||||||| || ||
Sbjct: 70912 cattgggattgaacgggtagacttcggtaatgttattagcatcgtcacagtaccgcacag 70971

                                                                         
Query: 469   gggccagattagatttgacaacatcagataagacatttccatctgggaagaaggctctac 528
             | ||||| ||||| || ||||||  || ||  |||||| ||||||||||||| ||||| |
Sbjct: 70972 gagccaggttagagttcacaacactagctagaacattttcatctgggaagaaagctctcc 71031

                                                                         
Query: 529   cttcaccatgagcactccaaatgcccaatgtagagccttccatacctttgaacattatag 588
             | ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 71032 cctcaccatgagcactccaaatgcccagtgtagaaccttccattcctttgaacatgatag 71091



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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
              complete sequence
          Length = 160603

 Score =  325 bits (164), Expect = 1e-85
 Identities = 314/364 (86%)
 Strand = Plus / Minus

                                                                          
Query: 225    tatgaacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttc 284
              ||||||||||||||||| ||||||||||||||||||| ||| || || ||||||||||||
Sbjct: 106638 tatgaacaccattctctagcattctggaacatgcgcagccaggggctgggaccactcttc 106579

                                                                          
Query: 285    tcaacctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccggg 344
              |||| |||||||||||||||| ||||||| |||||||||||||| ||| ||||||| |||
Sbjct: 106578 tcaagctgccaatccttgggagaccatggatattgccacatcatgaagcaacgctctggg 106519

                                                                          
Query: 345    tgcggcatcagagcaaggtgccttccattgggggagcaaagggccgcaataccaagcgga 404
              || ||||||| |||||| || |||||||  |||||||||||||| ||||| ||||| |||
Sbjct: 106518 tgtggcatcatagcaagatgtcttccatcaggggagcaaagggctgcaatgccaagtgga 106459

                                                                          
Query: 405    gagccattagggttgaaaggatagacctctgtgacgttattagcatcatcgcagtacctc 464
              |||||||| || ||||| || ||||| || || | |||||||||||| || ||||||| |
Sbjct: 106458 gagccattgggattgaatgggtagacttcagttatgttattagcatcgtcacagtaccgc 106399

                                                                          
Query: 465    agaggggccagattagatttgacaacatcagataagacatttccatctgggaagaaggct 524
              | ||| ||||| ||||| || ||||||  || ||  |||||| ||||||||||||| |||
Sbjct: 106398 acaggagccaggttagactttacaacactagctagaacattttcatctgggaagaaagct 106339

                                                                          
Query: 525    ctaccttcaccatgagcactccaaatgcccaatgtagagccttccatacctttgaacatt 584
              || || ||||| ||||||||||||||||||| |||||| |||||||| ||||||||||| 
Sbjct: 106338 ctcccctcaccgtgagcactccaaatgcccattgtagaaccttccattcctttgaacatg 106279

                  
Query: 585    atag 588
              ||||
Sbjct: 106278 atag 106275



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>dbj|AK106608.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-E12, full
            insert sequence
          Length = 2772

 Score =  309 bits (156), Expect = 6e-81
 Identities = 310/360 (86%), Gaps = 1/360 (0%)
 Strand = Plus / Minus

                                                                        
Query: 229  aacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttctcaa 288
            ||||||||| ||| ||||||||||||||||||| ||| ||||| ||||||| ||||||||
Sbjct: 2377 aacaccatt-tctggcattctggaacatgcgcagccagggactgggaccacacttctcaa 2319

                                                                        
Query: 289  cctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccgggtgcg 348
             |||||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||||| |
Sbjct: 2318 gctgccattccttgggataccatggatattgccacatcatgaagcaacgctctgggtgtg 2259

                                                                        
Query: 349  gcatcagagcaaggtgccttccattgggggagcaaagggccgcaataccaagcggagagc 408
            |||||| |||||| || |||||||  |||||||||||||| ||||| ||||| |||||||
Sbjct: 2258 gcatcatagcaagatgtcttccatcaggggagcaaagggctgcaatgccaaggggagagc 2199

                                                                        
Query: 409  cattagggttgaaaggatagacctctgtgacgttattagcatcatcgcagtacctcagag 468
            |||| || ||||| || ||||| || || | |||||||||||| || ||||||| || ||
Sbjct: 2198 cattgggattgaacgggtagacttcggtaatgttattagcatcgtcacagtaccgcacag 2139

                                                                        
Query: 469  gggccagattagatttgacaacatcagataagacatttccatctgggaagaaggctctac 528
            | ||||| ||||| || ||||||  || ||  |||||| ||||||||||||| ||||| |
Sbjct: 2138 gagccaggttagagttcacaacactagctagaacattttcatctgggaagaaagctctcc 2079

                                                                        
Query: 529  cttcaccatgagcactccaaatgcccaatgtagagccttccatacctttgaacattatag 588
            | ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 2078 cctcaccatgagcactccaaatgcccagtgtagaaccttccattcctttgaacatgatag 2019



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>gb|AY105195.1| Zea mays PCO078174 mRNA sequence
          Length = 468

 Score =  157 bits (79), Expect = 5e-35
 Identities = 115/127 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 ctatgaacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactctt 283
           |||||||||||||||||| |||||||||||||| |||| |||||| || || ||||||||
Sbjct: 138 ctatgaacaccattctctagcattctggaacattcgcagccaagggctggggccactctt 79

                                                                       
Query: 284 ctcaacctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccgg 343
           |||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||
Sbjct: 78  ctcaacctgccattccttgggataccatggatattgccacatcatgaagcaacgctctgg 19

                  
Query: 344 gtgcggc 350
            ||||||
Sbjct: 18  atgcggc 12



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>gb|AY069939.1| Vigna unguiculata formylglycinamide ribonucleotide amidotransferase
            (pur4) mRNA, partial cds
          Length = 4115

 Score =  107 bits (54), Expect = 4e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                        
Query: 228  gaacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttctca 287
            |||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| 
Sbjct: 3866 gaacaccactctcttgcattctggaacatgcgcaaccaaggactaggcccattcttctcc 3807

                                                  
Query: 288  acctgccaatccttgggataccatgggtattgccacat 325
            || | ||| | ||| |||||||||||| | ||||||||
Sbjct: 3806 acatcccagtgctttggataccatgggaactgccacat 3769



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>gb|AY178839.1| Glycine max phosphoribosylformylglycinamidine synthase (FGAM2) gene,
            complete cds
          Length = 6450

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 121/145 (83%)
 Strand = Plus / Minus

                                                                        
Query: 228  gaacaccattctcttgcattctggaacatgcgcaaccaaggactaggaccactcttctca 287
            |||||||| ||||||||||||||||||||||| |||||||||||||| ||  ||||||| 
Sbjct: 6421 gaacaccactctcttgcattctggaacatgcgtaaccaaggactaggccccttcttctcc 6362

                                                                        
Query: 288  acctgccaatccttgggataccatgggtattgccacatcataaaggaacgctccgggtgc 347
            || | ||| | ||| |||||||||||| | |||||||| |  ||| ||||||| || || 
Sbjct: 6361 acatcccactgctttggataccatgggaactgccacattaagaagcaacgctcaggatga 6302

                                     
Query: 348  ggcatcagagcaaggtgccttccat 372
            |||||||  ||||| ||||| ||||
Sbjct: 6301 ggcatcatggcaagatgcctcccat 6277



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>ref|XM_448421.1| Candida glabrata CBS138, CAGL0K04499g partial mRNA
          Length = 4041

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 521  ggctctaccttcaccatgagca 542
            ||||||||||||||||||||||
Sbjct: 3744 ggctctaccttcaccatgagca 3723



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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 521    ggctctaccttcaccatgagca 542
              ||||||||||||||||||||||
Sbjct: 425358 ggctctaccttcaccatgagca 425379



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>gb|DQ140322.1| Hepatitis C virus isolate S1 non-structural protein 5A gene,
           partial cds
          Length = 366

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 365 ccttccattgggggagcaaagg 386
           ||||||||||||||||||||||
Sbjct: 289 ccttccattgggggagcaaagg 268



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>ref|NM_059603.2| Caenorhabditis elegans protein KINase family member (kin-14) (kin-14)
            mRNA, complete cds
          Length = 1268

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 535  catgagcactccaaatgcccaa 556
            ||||||||||||||||||||||
Sbjct: 1002 catgagcactccaaatgcccaa 981



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>dbj|AB054296.2| Oryzias latipes OlGC2 gene for membrane guanylyl cyclase OlGC2,
             complete cds
          Length = 27582

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 130   tgagaactgctgtctgtcactt 151
             ||||||||||||||||||||||
Sbjct: 16110 tgagaactgctgtctgtcactt 16089



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>gb|AF104455.1| Homo sapiens chromosome 7qtelo BAC F6, complete sequence
          Length = 71353

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 536   atgagcactccaaatgcccaa 556
             |||||||||||||||||||||
Sbjct: 44594 atgagcactccaaatgcccaa 44614



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>ref|XM_744414.1| Aspergillus fumigatus Af293 DNA excision repair protein Rad26L
            (Afu2g03750) partial mRNA
          Length = 3027

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 318  tgccacatcataaaggaacgc 338
            |||||||||||||||||||||
Sbjct: 1150 tgccacatcataaaggaacgc 1170



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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     acgctccgggtgcggcatca 354
               ||||||||||||||||||||
Sbjct: 1165108 acgctccgggtgcggcatca 1165089



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>ref|XM_706027.1| Candida albicans SC5314 5'-phosphoribosylformyl glycinamidine
            synthetase (CaO19.13694), mRNA
          Length = 4113

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 522  gctctaccttcaccatgagc 541
            ||||||||||||||||||||
Sbjct: 3812 gctctaccttcaccatgagc 3793



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>ref|XM_706010.1| Candida albicans SC5314 5'-phosphoribosylformyl glycinamidine
            synthetase (CaO19.6317), mRNA
          Length = 4113

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 522  gctctaccttcaccatgagc 541
            ||||||||||||||||||||
Sbjct: 3812 gctctaccttcaccatgagc 3793



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     acgctccgggtgcggcatca 354
               ||||||||||||||||||||
Sbjct: 1437134 acgctccgggtgcggcatca 1437115



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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 336     cgctccgggtgcggcatcag 355
               ||||||||||||||||||||
Sbjct: 2026359 cgctccgggtgcggcatcag 2026378



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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 336     cgctccgggtgcggcatcag 355
               ||||||||||||||||||||
Sbjct: 4240145 cgctccgggtgcggcatcag 4240164



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     ttgcggaatcatgtagctca 29
              ||||||||||||||||||||
Sbjct: 188262 ttgcggaatcatgtagctca 188281



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>emb|CR378667.1| Photobacterium profundum SS9; segment 5/12
          Length = 349080

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    agttcttccagcgcgataat 172
              ||||||||||||||||||||
Sbjct: 213435 agttcttccagcgcgataat 213416



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>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              2/17
          Length = 349287

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 514    ggaagaaggctctaccttcaccat 537
              ||||||||| ||||||||||||||
Sbjct: 136136 ggaagaaggatctaccttcaccat 136113



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>gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete sequence
          Length = 136333

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  caatttggtcccttatctat 227
            ||||||||||||||||||||
Sbjct: 4854 caatttggtcccttatctat 4873



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>gb|AC096543.2| Homo sapiens chromosome 1 clone RP11-335E6, complete sequence
          Length = 162837

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 233   ccattctcttgcattctggaacat 256
             |||||||||||||| |||||||||
Sbjct: 27185 ccattctcttgcatcctggaacat 27208



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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 145     gtcacttgagttcttccagc 164
               ||||||||||||||||||||
Sbjct: 1105777 gtcacttgagttcttccagc 1105796



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>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0505D12
          Length = 146951

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    gaggggccagattagatttg 485
              ||||||||||||||||||||
Sbjct: 121489 gaggggccagattagatttg 121470



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>ref|NM_211273.1| Eremothecium gossypii AFR371Wp (AFR371W), mRNA
          Length = 3081

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gtcacttgagttcttccagc 164
           ||||||||||||||||||||
Sbjct: 15  gtcacttgagttcttccagc 34



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 335     acgctccgggtgcggcatca 354
               ||||||||||||||||||||
Sbjct: 4680814 acgctccgggtgcggcatca 4680833



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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 336     cgctccgggtgcggcatcag 355
               ||||||||||||||||||||
Sbjct: 1846041 cgctccgggtgcggcatcag 1846022



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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     acgctccgggtgcggcatca 354
               ||||||||||||||||||||
Sbjct: 1188594 acgctccgggtgcggcatca 1188575


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,446,398
Number of Sequences: 3902068
Number of extensions: 4446398
Number of successful extensions: 77495
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77278
Number of HSP's gapped (non-prelim): 216
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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