| Clone Name | rbags17c17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AC115968.10| Mus musculus chromosome 1, clone RP24-72P6, comp... | 36 | 6.0 | 2 | emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chro... | 36 | 6.0 | 3 | dbj|AK047341.1| Mus musculus 10 days neonate cerebellum cDNA, RI... | 36 | 6.0 | 4 | emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chr... | 36 | 6.0 |
|---|
>gb|AC115968.10| Mus musculus chromosome 1, clone RP24-72P6, complete sequence Length = 229959 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 24 ggagacgaccttgcccagcttg 45 |||||||||| ||||||||||| Sbjct: 180323 ggagacgaccctgcccagcttg 180344
>emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chromosome 10 Contains part of the gene for alpha-catenin-like protein (MGC26194) (VR22), complete sequence Length = 163119 Score = 36.2 bits (18), Expect = 6.0 Identities = 20/21 (95%) Strand = Plus / Minus Query: 4 tgggtgcaggatttnttgagg 24 |||||||||||||| |||||| Sbjct: 66304 tgggtgcaggatttgttgagg 66284
>dbj|AK047341.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930051F23 product:unclassifiable, full insert sequence Length = 3440 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 gaccttgcccagcttgct 47 |||||||||||||||||| Sbjct: 3290 gaccttgcccagcttgct 3273
>emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chromosome 2, complete sequence Length = 212364 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 gaccttgcccagcttgct 47 |||||||||||||||||| Sbjct: 67011 gaccttgcccagcttgct 67028 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 186,571 Number of Sequences: 3902068 Number of extensions: 186571 Number of successful extensions: 48334 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48327 Number of HSP's gapped (non-prelim): 7 length of query: 47 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 27 effective length of database: 17,155,003,908 effective search space: 463185105516 effective search space used: 463185105516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)