| Clone Name | rbags16n11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104229.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D03, full insert sequence Length = 1247 Score = 311 bits (157), Expect = 1e-81 Identities = 331/389 (85%) Strand = Plus / Minus Query: 227 cgtcatcttcgtcgctcactccgctccatcaagaatggatgctcaagggcctcttgggcc 286 |||||||||| |||||| | ||||| |||||||||||||| ||| |||||||| || Sbjct: 1111 cgtcatcttcttcgctcggactgctccctcaagaatggatgcctaagcgcctcttgtgct 1052 Query: 287 gttaggcggcttgctggatcatagctcagcagcccttggagaagattgatgaagtcccca 346 ||||||||||| ||||||||||| || | ||| ||||| | ||| | ||||| || || Sbjct: 1051 gttaggcggctagctggatcataccttaacagaccttgcaaaaggtcaatgaactcgccc 992 Query: 347 gcagaatgttctatgttttgcatcacaagattctgaagccggggcagcttcataacagct 406 ||||||| |||| ||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 991 ccagaatgatctacattttgcatcaccagattctgaagacgtggcagcttcataacagct 932 Query: 407 ttcatgctttcccgtgaagcacatccttcaggccagtttaaacggccctttctcacatat 466 |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 931 ttcatgctatcccgtgacgcacaaccttcaggccagtttaaacggccttttctgacatat 872 Query: 467 ttctcaccatgtcgatcggcctttttgagcatgtgatatggcaacggcccgagcaccctc 526 ||||| ||| || || ||| |||||||||||||| ||||||| || || | |||||| Sbjct: 871 ttctcggaatgccggtctgcccttttgagcatgtgacatggcaaaggaccaaataccctc 812 Query: 527 tccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccgtgcag 586 ||||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||| Sbjct: 811 tccatcatagcaagatgctccaagttttcatgggtctgaaacaatgcttctcccgtgcat 752 Query: 587 agttcaactagtatacaaccaacgctcca 615 || ||||| |||||||||||||| ||||| Sbjct: 751 agctcaaccagtatacaaccaacactcca 723
>dbj|AK066287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064I06, full insert sequence Length = 1336 Score = 311 bits (157), Expect = 1e-81 Identities = 331/389 (85%) Strand = Plus / Minus Query: 227 cgtcatcttcgtcgctcactccgctccatcaagaatggatgctcaagggcctcttgggcc 286 |||||||||| |||||| | ||||| |||||||||||||| ||| |||||||| || Sbjct: 1140 cgtcatcttcttcgctcggactgctccctcaagaatggatgcctaagcgcctcttgtgct 1081 Query: 287 gttaggcggcttgctggatcatagctcagcagcccttggagaagattgatgaagtcccca 346 ||||||||||| ||||||||||| || | ||| ||||| | ||| | ||||| || || Sbjct: 1080 gttaggcggctagctggatcataccttaacagaccttgcaaaaggtcaatgaactcgccc 1021 Query: 347 gcagaatgttctatgttttgcatcacaagattctgaagccggggcagcttcataacagct 406 ||||||| |||| ||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1020 ccagaatgatctacattttgcatcaccagattctgaagacgtggcagcttcataacagct 961 Query: 407 ttcatgctttcccgtgaagcacatccttcaggccagtttaaacggccctttctcacatat 466 |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 960 ttcatgctatcccgtgacgcacaaccttcaggccagtttaaacggccttttctgacatat 901 Query: 467 ttctcaccatgtcgatcggcctttttgagcatgtgatatggcaacggcccgagcaccctc 526 ||||| ||| || || ||| |||||||||||||| ||||||| || || | |||||| Sbjct: 900 ttctcggaatgccggtctgcccttttgagcatgtgacatggcaaaggaccaaataccctc 841 Query: 527 tccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccgtgcag 586 ||||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||| Sbjct: 840 tccatcatagcaagatgctccaagttttcatgggtctgaaacaatgcttctcccgtgcat 781 Query: 587 agttcaactagtatacaaccaacgctcca 615 || ||||| |||||||||||||| ||||| Sbjct: 780 agctcaaccagtatacaaccaacactcca 752
>dbj|AK061708.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F11, full insert sequence Length = 767 Score = 311 bits (157), Expect = 1e-81 Identities = 331/389 (85%) Strand = Plus / Minus Query: 227 cgtcatcttcgtcgctcactccgctccatcaagaatggatgctcaagggcctcttgggcc 286 |||||||||| |||||| | ||||| |||||||||||||| ||| |||||||| || Sbjct: 571 cgtcatcttcttcgctcggactgctccctcaagaatggatgcctaagcgcctcttgtgct 512 Query: 287 gttaggcggcttgctggatcatagctcagcagcccttggagaagattgatgaagtcccca 346 ||||||||||| ||||||||||| || | ||| ||||| | ||| | ||||| || || Sbjct: 511 gttaggcggctagctggatcataccttaacagaccttgcaaaaggtcaatgaactcgccc 452 Query: 347 gcagaatgttctatgttttgcatcacaagattctgaagccggggcagcttcataacagct 406 ||||||| |||| ||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 451 ccagaatgatctacattttgcatcaccagattctgaagacgtggcagcttcataacagct 392 Query: 407 ttcatgctttcccgtgaagcacatccttcaggccagtttaaacggccctttctcacatat 466 |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 391 ttcatgctatcccgtgacgcacaaccttcaggccagtttaaacggccttttctgacatat 332 Query: 467 ttctcaccatgtcgatcggcctttttgagcatgtgatatggcaacggcccgagcaccctc 526 ||||| ||| || || ||| |||||||||||||| ||||||| || || | |||||| Sbjct: 331 ttctcggaatgccggtctgcccttttgagcatgtgacatggcaaaggaccaaataccctc 272 Query: 527 tccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccgtgcag 586 ||||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||| Sbjct: 271 tccatcatagcaagatgctccaagttttcatgggtctgaaacaatgcttctcccgtgcat 212 Query: 587 agttcaactagtatacaaccaacgctcca 615 || ||||| |||||||||||||| ||||| Sbjct: 211 agctcaaccagtatacaaccaacactcca 183
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Plus Query: 379 ctgaagccggggcagcttcataacagctttcatgctttcccgtgaagcacatccttcagg 438 |||||| || |||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 16241930 ctgaagacgtggcagcttcataacagctttcatgctatcccgtgacgcacaaccttcagg 16241989 Query: 439 ccagtttaaacggccctttctcacatatttctc 471 ||||||||||||||| ||||| ||||||||||| Sbjct: 16241990 ccagtttaaacggccttttctgacatatttctc 16242022 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 489 ttttgagcatgtgatatggcaacggcccgagcaccctctccatcatagcaagatgctcca 548 |||||||||||||| ||||||| || || | |||||||||||||||||||||||||||| Sbjct: 16242135 ttttgagcatgtgacatggcaaaggaccaaataccctctccatcatagcaagatgctcca 16242194 Query: 549 aattttcatgggtttgaaaca 569 | ||||||||||| ||||||| Sbjct: 16242195 agttttcatgggtctgaaaca 16242215 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 227 cgtcatcttcgtcgctcactccgctccatcaagaatggatgctcaagggcctcttgggcc 286 |||||||||| |||||| | ||||| |||||||||||||| ||| |||||||| || Sbjct: 16241697 cgtcatcttcttcgctcggactgctccctcaagaatggatgcctaagcgcctcttgtgct 16241756 Query: 287 gttaggcggcttgctggatcatagctcagcagcccttggagaagattgatgaagtcccca 346 ||||||||||| ||||||||||| || | ||| ||||| | ||| | ||||| || || Sbjct: 16241757 gttaggcggctagctggatcataccttaacagaccttgcaaaaggtcaatgaactcgccc 16241816 Query: 347 gcagaatgttctatgttttgcatcacaagattctg 381 ||||||| |||| ||||||||||| |||||||| Sbjct: 16241817 ccagaatgatctacattttgcatcaccagattctg 16241851 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 579 ccgtgcagagttcaactagtatacaaccaacgctcca 615 ||||||| || ||||| |||||||||||||| ||||| Sbjct: 16242304 ccgtgcatagctcaaccagtatacaaccaacactcca 16242340
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Plus Query: 379 ctgaagccggggcagcttcataacagctttcatgctttcccgtgaagcacatccttcagg 438 |||||| || |||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 16195163 ctgaagacgtggcagcttcataacagctttcatgctatcccgtgacgcacaaccttcagg 16195222 Query: 439 ccagtttaaacggccctttctcacatatttctc 471 ||||||||||||||| ||||| ||||||||||| Sbjct: 16195223 ccagtttaaacggccttttctgacatatttctc 16195255 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 489 ttttgagcatgtgatatggcaacggcccgagcaccctctccatcatagcaagatgctcca 548 |||||||||||||| ||||||| || || | |||||||||||||||||||||||||||| Sbjct: 16195368 ttttgagcatgtgacatggcaaaggaccaaataccctctccatcatagcaagatgctcca 16195427 Query: 549 aattttcatgggtttgaaaca 569 | ||||||||||| ||||||| Sbjct: 16195428 agttttcatgggtctgaaaca 16195448 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 227 cgtcatcttcgtcgctcactccgctccatcaagaatggatgctcaagggcctcttgggcc 286 |||||||||| |||||| | ||||| |||||||||||||| ||| |||||||| || Sbjct: 16194930 cgtcatcttcttcgctcggactgctccctcaagaatggatgcctaagcgcctcttgtgct 16194989 Query: 287 gttaggcggcttgctggatcatagctcagcagcccttggagaagattgatgaagtcccca 346 ||||||||||| ||||||||||| || | ||| ||||| | ||| | ||||| || || Sbjct: 16194990 gttaggcggctagctggatcataccttaacagaccttgcaaaaggtcaatgaactcgccc 16195049 Query: 347 gcagaatgttctatgttttgcatcacaagattctg 381 ||||||| |||| ||||||||||| |||||||| Sbjct: 16195050 ccagaatgatctacattttgcatcaccagattctg 16195084 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 579 ccgtgcagagttcaactagtatacaaccaacgctcca 615 ||||||| || ||||| |||||||||||||| ||||| Sbjct: 16195537 ccgtgcatagctcaaccagtatacaaccaacactcca 16195573
>emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial sequence from BAC B1004E12 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 24190 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Plus Query: 379 ctgaagccggggcagcttcataacagctttcatgctttcccgtgaagcacatccttcagg 438 |||||| || |||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 11785 ctgaagacgtggcagcttcataacagctttcatgctatcccgtgacgcacaaccttcagg 11844 Query: 439 ccagtttaaacggccctttctcacatatttctc 471 ||||||||||||||| ||||| ||||||||||| Sbjct: 11845 ccagtttaaacggccttttctgacatatttctc 11877 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 489 ttttgagcatgtgatatggcaacggcccgagcaccctctccatcatagcaagatgctcca 548 |||||||||||||| ||||||| || || | |||||||||||||||||||||||||||| Sbjct: 11990 ttttgagcatgtgacatggcaaaggaccaaataccctctccatcatagcaagatgctcca 12049 Query: 549 aattttcatgggtttgaaaca 569 | ||||||||||| ||||||| Sbjct: 12050 agttttcatgggtctgaaaca 12070 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 227 cgtcatcttcgtcgctcactccgctccatcaagaatggatgctcaagggcctcttgggcc 286 |||||||||| |||||| | ||||| |||||||||||||| ||| |||||||| || Sbjct: 11552 cgtcatcttcttcgctcggactgctccctcaagaatggatgcctaagcgcctcttgtgct 11611 Query: 287 gttaggcggcttgctggatcatagctcagcagcccttggagaagattgatgaagtcccca 346 ||||||||||| ||||||||||| || | ||| ||||| | ||| | ||||| || || Sbjct: 11612 gttaggcggctagctggatcataccttaacagaccttgcaaaaggtcaatgaactcgccc 11671 Query: 347 gcagaatgttctatgttttgcatcacaagattctg 381 ||||||| |||| ||||||||||| |||||||| Sbjct: 11672 ccagaatgatctacattttgcatcaccagattctg 11706 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 579 ccgtgcagagttcaactagtatacaaccaacgctcca 615 ||||||| || ||||| |||||||||||||| ||||| Sbjct: 12159 ccgtgcatagctcaaccagtatacaaccaacactcca 12195
>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165955 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 379 ctgaagccggggcagcttcataacagctttcatgctttcccgtgaagcacatccttcagg 438 |||||| || |||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 1413 ctgaagacgtggcagcttcataacagctttcatgctatcccgtgacgcacaaccttcagg 1354 Query: 439 ccagtttaaacggccctttctcacatatttctc 471 ||||||||||||||| ||||| ||||||||||| Sbjct: 1353 ccagtttaaacggccttttctgacatatttctc 1321 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 489 ttttgagcatgtgatatggcaacggcccgagcaccctctccatcatagcaagatgctcca 548 |||||||||||||| ||||||| || || | |||||||||||||||||||||||||||| Sbjct: 1208 ttttgagcatgtgacatggcaaaggaccaaataccctctccatcatagcaagatgctcca 1149 Query: 549 aattttcatgggtttgaaaca 569 | ||||||||||| ||||||| Sbjct: 1148 agttttcatgggtctgaaaca 1128 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 227 cgtcatcttcgtcgctcactccgctccatcaagaatggatgctcaagggcctcttgggcc 286 |||||||||| |||||| | ||||| |||||||||||||| ||| |||||||| || Sbjct: 1646 cgtcatcttcttcgctcggactgctccctcaagaatggatgcctaagcgcctcttgtgct 1587 Query: 287 gttaggcggcttgctggatcatagctcagcagcccttggagaagattgatgaagtcccca 346 ||||||||||| ||||||||||| || | ||| ||||| | ||| | ||||| || || Sbjct: 1586 gttaggcggctagctggatcataccttaacagaccttgcaaaaggtcaatgaactcgccc 1527 Query: 347 gcagaatgttctatgttttgcatcacaagattctg 381 ||||||| |||| ||||||||||| |||||||| Sbjct: 1526 ccagaatgatctacattttgcatcaccagattctg 1492 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 579 ccgtgcagagttcaactagtatacaaccaacgctcca 615 ||||||| || ||||| |||||||||||||| ||||| Sbjct: 1039 ccgtgcatagctcaaccagtatacaaccaacactcca 1003
>gb|BT019030.1| Zea mays clone Contig539.F mRNA sequence Length = 1334 Score = 83.8 bits (42), Expect = 6e-13 Identities = 201/254 (79%) Strand = Plus / Minus Query: 362 ttttgcatcacaagattctgaagccggggcagcttcataacagctttcatgctttcccgt 421 ||||||||||| ||||||||||||| || || ||||| ||||||||||||||||| || Sbjct: 979 ttttgcatcaccagattctgaagcctggacaatttcatcacagctttcatgctttcacgc 920 Query: 422 gaagcacatccttcaggccagtttaaacggccctttctcacatatttctcaccatgtcga 481 |||| || || |||||||| || | | || ||||| | ||||| ||| || ||| Sbjct: 919 gaagtgcaaccctcaggccaattcaggggtccttttctgatgtatttgtcagagtgccga 860 Query: 482 tcggcctttttgagcatgtgatatggcaacggcccgagcaccctctccatcatagcaaga 541 || ||| | |||| ||| || || ||||| || || || ||||||||||||||||| ||| Sbjct: 859 tctgccctcttgaacatatggtacggcaaaggtccaagaaccctctccatcatagccaga 800 Query: 542 tgctccaaattttcatgggtttgaaacagcgcctctcccgtgcagagttcaactagtata 601 || ||||| ||||| || || || || | |||||| |||||||| || ||||| || ||| Sbjct: 799 tgttccaagttttcgtgagtctggaatatcgcctcacccgtgcaaagctcaacaagaata 740 Query: 602 caaccaacgctcca 615 |||||||| ||||| Sbjct: 739 caaccaacactcca 726
>ref|NM_190508.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 524 ctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccgtg 583 |||||||||||||| | |||||||||||||||||| |||||||| || || || |||| | Sbjct: 1004 ctctccatcatagccaaatgctccaaattttcatgtgtttgaaagagagcttcacccgag 945 Query: 584 cagagttcaacta 596 ||||||||||||| Sbjct: 944 cagagttcaacta 932
>dbj|AK103207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122I09, full insert sequence Length = 1704 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 524 ctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccgtg 583 |||||||||||||| | |||||||||||||||||| |||||||| || || || |||| | Sbjct: 1200 ctctccatcatagccaaatgctccaaattttcatgtgtttgaaagagagcttcacccgag 1141 Query: 584 cagagttcaacta 596 ||||||||||||| Sbjct: 1140 cagagttcaacta 1128
>ref|NM_001036697.1| Arabidopsis thaliana AME3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G32660 (AME3) transcript variant AT4G32660.3 mRNA, complete cds Length = 1552 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 522 ccctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccg 581 |||||||||||||||| ||||| || | || ||||| || ||||| || ||||| |||| Sbjct: 1061 ccctctccatcatagctagatgttctaggttatcatgcgtctgaaagagagcctcacccg 1002 Query: 582 tgcagagttcaactagtatacaacc 606 |||| ||||||| |||||||||||| Sbjct: 1001 tgcatagttcaaatagtatacaacc 977
>ref|NM_202937.1| Arabidopsis thaliana AME3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G32660 (AME3) transcript variant AT4G32660.2 mRNA, complete cds Length = 1698 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 522 ccctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccg 581 |||||||||||||||| ||||| || | || ||||| || ||||| || ||||| |||| Sbjct: 1187 ccctctccatcatagctagatgttctaggttatcatgcgtctgaaagagagcctcacccg 1128 Query: 582 tgcagagttcaactagtatacaacc 606 |||| ||||||| |||||||||||| Sbjct: 1127 tgcatagttcaaatagtatacaacc 1103
>ref|NM_119418.2| Arabidopsis thaliana AME3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G32660 (AME3) transcript variant AT4G32660.1 mRNA, complete cds Length = 1678 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 522 ccctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccg 581 |||||||||||||||| ||||| || | || ||||| || ||||| || ||||| |||| Sbjct: 1187 ccctctccatcatagctagatgttctaggttatcatgcgtctgaaagagagcctcacccg 1128 Query: 582 tgcagagttcaactagtatacaacc 606 |||| ||||||| |||||||||||| Sbjct: 1127 tgcatagttcaaatagtatacaacc 1103
>emb|BX827951.1|CNS0A4FP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1647 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 522 ccctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccg 581 |||||||||||||||| ||||| || | || ||||| || ||||| || ||||| |||| Sbjct: 1174 ccctctccatcatagctagatgttctaggttatcatgcgtctgaaagagagcctcacccg 1115 Query: 582 tgcagagttcaactagtatacaacc 606 |||| ||||||| |||||||||||| Sbjct: 1114 tgcatagttcaaatagtatacaacc 1090
>gb|U16178.1|ATU16178 Arabidopsis thaliana protein kinase (AFC3) mRNA, partial cds Length = 1395 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 522 ccctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccg 581 |||||||||||||||| ||||| || | || ||||| || ||||| || ||||| |||| Sbjct: 904 ccctctccatcatagctagatgttctaggttatcatgcgtctgaaagagagcctcacccg 845 Query: 582 tgcagagttcaactagtatacaacc 606 |||| ||||||| |||||||||||| Sbjct: 844 tgcatagttcaaatagtatacaacc 820
>dbj|D45355.1|ATHPKAME3C Arabidopsis thaliana AME3 mRNA for protein kinase, complete cds Length = 1468 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 522 ccctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccg 581 |||||||||||||||| ||||| || | || ||||| || ||||| || ||||| |||| Sbjct: 978 ccctctccatcatagctagatgttctaggttatcatgcgtctgaaagagagcctcacccg 919 Query: 582 tgcagagttcaactagtatacaacc 606 |||| ||||||| |||||||||||| Sbjct: 918 tgcatagttcaaatagtatacaacc 894
>ref|NM_180364.2| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.1 mRNA, complete cds Length = 1887 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1435 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 1376 Query: 581 gtgcagagttcaactagtatacaaccaa 608 | || |||||||| ||||| ||||||| Sbjct: 1375 gaacaaagttcaacaagtatgcaaccaa 1348
>ref|NM_202696.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.3 mRNA, complete cds Length = 1659 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1207 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 1148 Query: 581 gtgcagagttcaactagtatacaaccaa 608 | || |||||||| ||||| ||||||| Sbjct: 1147 gaacaaagttcaacaagtatgcaaccaa 1120
>ref|NM_115217.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.2 mRNA, complete cds Length = 1732 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1233 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 1174 Query: 581 gtgcagagttcaactagtatacaaccaa 608 | || |||||||| ||||| ||||||| Sbjct: 1173 gaacaaagttcaacaagtatgcaaccaa 1146
>ref|NM_001035776.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.4 mRNA, complete cds Length = 1847 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1234 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 1175 Query: 581 gtgcagagttcaactagtatacaaccaa 608 | || |||||||| ||||| ||||||| Sbjct: 1174 gaacaaagttcaacaagtatgcaaccaa 1147
>gb|AY034936.2| Arabidopsis thaliana At3g53570 mRNA sequence Length = 1558 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1210 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 1151 Query: 581 gtgcagagttcaactagtatacaaccaa 608 | || |||||||| ||||| ||||||| Sbjct: 1150 gaacaaagttcaacaagtatgcaaccaa 1123
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 524 ctctccatcatagcaagatgctccaaattttcatgggtttgaaa 567 |||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 35919519 ctctccatcatagccaaatgctccaaattttcatgtgtttgaaa 35919562 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 ttctatgttttgcatcacaagatt 378 ||||||||||| |||||||||||| Sbjct: 34559814 ttctatgttttccatcacaagatt 34559837
>emb|BX822243.1|CNS0A7TI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1887 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1435 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 1376 Query: 581 gtgcagagttcaactagtatacaaccaa 608 | || |||||||| ||||| ||||||| Sbjct: 1375 gaacaaagttcaacaagtatgcaaccaa 1348
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 524 ctctccatcatagcaagatgctccaaattttcatgggtttgaaa 567 |||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 18197 ctctccatcatagccaaatgctccaaattttcatgtgtttgaaa 18240
>gb|AY109522.1| Zea mays CL31185_1 mRNA sequence Length = 1158 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 524 ctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctcccgtg 583 |||||||||||||| ||||| ||||| ||||| || || || || | |||||| |||||| Sbjct: 579 ctctccatcatagccagatgttccaagttttcgtgagtctggaataacgcctcacccgtg 638 Query: 584 cagagttcaactagtatacaaccaacgctcca 615 || || ||||| || ||||||||||| ||||| Sbjct: 639 caaagctcaacaagaatacaaccaacactcca 670 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 362 ttttgcatcacaagattctgaagccggggcagcttcataacagctttcatgctttcccg 420 ||||||||||| ||||||||||||| || || ||||| |||||||||||||| ||||| Sbjct: 334 ttttgcatcaccagattctgaagcctggacaatttcatcacagctttcatgctctcccg 392
>gb|U16176.1|ATU16176 Arabidopsis thaliana protein kinase (AFC1) mRNA, complete cds Length = 1732 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1233 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 1174 Query: 581 gtgcagagttcaactagtatacaaccaa 608 | || |||||||| ||||| ||||||| Sbjct: 1173 gaacaaagttcaacaagtatgcaaccaa 1146
>dbj|D45354.1|ATHPKAME2B Arabidopsis thaliana AME2 mRNA for protein kinase, complete cds Length = 1716 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1213 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 1154 Query: 581 gtgcagagttcaactagtatacaaccaa 608 | || |||||||| ||||| ||||||| Sbjct: 1153 gaacaaagttcaacaagtatgcaaccaa 1126
>gb|AY109648.1| Zea mays CL57146_1 mRNA sequence Length = 1151 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 525 tctccatcatagcaagatgctccaaattttcatgggtttgaaa 567 ||||||||||||| | ||||||||| |||||||| |||||||| Sbjct: 622 tctccatcatagccaaatgctccaagttttcatgtgtttgaaa 580
>emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 on chromosome 3, complete sequence Length = 97738 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 524 ctctccatcatagcaagatgctccaaattttcatgggtttgaaaca 569 ||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 2459 ctctccatcattgccaggtgctccaaattttcatgagtctgaaaca 2504
>gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete sequence Length = 92216 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 524 ctctccatcatagcaagatgctccaaattttcatgggtttgaaaca 569 ||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 34076 ctctccatcattgccaggtgctccaaattttcatgagtctgaaaca 34031
>gb|AY111089.1| Zea mays CL31185_3 mRNA sequence Length = 574 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 362 ttttgcatcacaagattctgaagccggggcagcttcataacagctttcatgctttc 417 ||||||||||| || |||||||||| || || ||||| |||| |||||||||||| Sbjct: 368 ttttgcatcaccaggttctgaagcctggacaatttcatcacagttttcatgctttc 423
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 521 accctctccatcatagcaagatgctccaaattttcatgggtttgaaacagcgcctctccc 580 ||||| |||||||| || | ||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 102641 accctttccatcatggccaaatgttccaagttttcatgcgtttggaaaagcgcctctccc 102700
>ref|NM_202881.1| Arabidopsis thaliana AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); kinase AT4G24740 (AFC2) transcript variant AT4G24740.2 mRNA, complete cds Length = 1426 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Minus Query: 509 aacggcccgagcaccctctccatcatagcaagatgctccaaattttcatgggtttgaaac 568 |||||||| || || | ||||||||| || |||||||||| |||||||| ||||| ||| Sbjct: 959 aacggcccaagaacacgctccatcatcgctagatgctccaggttttcatgtgtttggaac 900 Query: 569 agcgcctctcccgtgcagagttcaactagtatacaaccaacgctcca 615 | || || |||||||| | || |||| ||||| ||||||||||| Sbjct: 899 aatgcttcacccgtgcacaactccactatgatacatccaacgctcca 853
>ref|NM_118607.2| Arabidopsis thaliana AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); kinase AT4G24740 (AFC2) transcript variant AT4G24740.1 mRNA, complete cds Length = 1604 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Minus Query: 509 aacggcccgagcaccctctccatcatagcaagatgctccaaattttcatgggtttgaaac 568 |||||||| || || | ||||||||| || |||||||||| |||||||| ||||| ||| Sbjct: 1136 aacggcccaagaacacgctccatcatcgctagatgctccaggttttcatgtgtttggaac 1077 Query: 569 agcgcctctcccgtgcagagttcaactagtatacaaccaacgctcca 615 | || || |||||||| | || |||| ||||| ||||||||||| Sbjct: 1076 aatgcttcacccgtgcacaactccactatgatacatccaacgctcca 1030
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 315 gcagcccttggagaagattgatg 337 ||||||||||||||||||||||| Sbjct: 1111641 gcagcccttggagaagattgatg 1111663
>emb|BX827973.1|CNS0A3VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZG01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1319 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Minus Query: 509 aacggcccgagcaccctctccatcatagcaagatgctccaaattttcatgggtttgaaac 568 |||||||| || || | ||||||||| || |||||||||| |||||||| ||||| ||| Sbjct: 885 aacggcccaagaacacgctccatcatcgctagatgctccaggttttcatgtgtttggaac 826 Query: 569 agcgcctctcccgtgcagagttcaactagtatacaaccaacgctcca 615 | || || |||||||| | || |||| ||||| ||||||||||| Sbjct: 825 aatgcttcacccgtgcacaactccactatgatacatccaacgctcca 779
>gb|U16177.1|ATU16177 Arabidopsis thaliana protein kinase (AFC2) mRNA, complete cds Length = 1519 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Minus Query: 509 aacggcccgagcaccctctccatcatagcaagatgctccaaattttcatgggtttgaaac 568 |||||||| || || | ||||||||| || |||||||||| |||||||| ||||| ||| Sbjct: 1059 aacggcccaagaacacgctccatcatcgctagatgctccaggttttcatgtgtttggaac 1000 Query: 569 agcgcctctcccgtgcagagttcaactagtatacaaccaacgctcca 615 | || || |||||||| | || |||| ||||| ||||||||||| Sbjct: 999 aatgcttcacccgtgcacaactccactatgatacatccaacgctcca 953
>dbj|D45353.1|ATHPKAME1A Arabidopsis thaliana AME1 mRNA for protein kinase, complete cds Length = 1604 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Minus Query: 509 aacggcccgagcaccctctccatcatagcaagatgctccaaattttcatgggtttgaaac 568 |||||||| || || | ||||||||| || |||||||||| |||||||| ||||| ||| Sbjct: 1136 aacggcccaagaacacgctccatcatcgctagatgctccaggttttcatgtgtttggaac 1077 Query: 569 agcgcctctcccgtgcagagttcaactagtatacaaccaacgctcca 615 | || || |||||||| | || |||| ||||| ||||||||||| Sbjct: 1076 aatgcttcacccgtgcacaactccactatgatacatccaacgctcca 1030
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 taacagctttcatgctttccc 419 ||||||||||||||||||||| Sbjct: 55844 taacagctttcatgctttccc 55864
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 aggatctcaagcacgtcatct 234 ||||||||||||||||||||| Sbjct: 361680 aggatctcaagcacgtcatct 361700
>gb|BC079608.1| Mus musculus neurexophilin 1, mRNA (cDNA clone IMAGE:30360281) Length = 2545 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 caagaatggatgctcaagggcctct 280 |||||||||||||||| |||||||| Sbjct: 1612 caagaatggatgctcatgggcctct 1588
>gb|BC068137.1| Mus musculus neurexophilin 1, mRNA (cDNA clone IMAGE:30534192), partial cds Length = 2593 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 caagaatggatgctcaagggcctct 280 |||||||||||||||| |||||||| Sbjct: 1662 caagaatggatgctcatgggcctct 1638
>gb|BT013142.1| Lycopersicon esculentum clone 134136R, mRNA sequence Length = 1656 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 431 ccttcaggccagtttaaacggccctttctcacatatttctcaccatgtcgatc 483 ||||||||||||| ||| || ||| | || ||||||||||| |||||||||| Sbjct: 1168 ccttcaggccagtctaatcgacccctccttacatatttctctgcatgtcgatc 1116
>emb|CT010458.8| Mouse DNA sequence from clone RP23-279C9 on chromosome 13, complete sequence Length = 240541 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 tcatagcaagatgctccaaat 551 ||||||||||||||||||||| Sbjct: 17091 tcatagcaagatgctccaaat 17071
>ref|XM_566595.1| Cryptococcus neoformans var. neoformans JEC21 splicing factor Prp8 (CNA01350) partial mRNA Length = 7731 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 aggatctcaagcacgtcatct 234 ||||||||||||||||||||| Sbjct: 1883 aggatctcaagcacgtcatct 1903
>emb|X75356.1|CBQPH1 C.burnetii QpH1 plasmid, complete genomic sequence Length = 37329 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 agaatgttctatgttttgcat 369 ||||||||||||||||||||| Sbjct: 31252 agaatgttctatgttttgcat 31232
>gb|AC025198.12| Homo sapiens chromosome 17, clone RP11-766H1, complete sequence Length = 198524 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 actcccattccatggaagaga 131 ||||||||||||||||||||| Sbjct: 43117 actcccattccatggaagaga 43137
>dbj|AK163438.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230033C15 product:neurexophilin 1, full insert sequence Length = 2133 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 caagaatggatgctcaagggcctct 280 |||||||||||||||| |||||||| Sbjct: 1346 caagaatggatgctcatgggcctct 1322
>gb|AE016829.1| Coxiella burnetii strain RSA 493 plasmid pQpH1, complete sequence Length = 37393 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 agaatgttctatgttttgcat 369 ||||||||||||||||||||| Sbjct: 5060 agaatgttctatgttttgcat 5080
>dbj|AK083014.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530033G22 product:neurexophilin 1, full insert sequence Length = 1982 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 caagaatggatgctcaagggcctct 280 |||||||||||||||| |||||||| Sbjct: 1898 caagaatggatgctcatgggcctct 1874
>dbj|AK047847.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130005L03 product:NEUREXOPHILIN 1 PRECURSOR homolog [Homo sapiens], full insert sequence Length = 2423 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 caagaatggatgctcaagggcctct 280 |||||||||||||||| |||||||| Sbjct: 1554 caagaatggatgctcatgggcctct 1530
>dbj|AK043942.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830055C10 product:neurexophilin 1, full insert sequence Length = 2678 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 caagaatggatgctcaagggcctct 280 |||||||||||||||| |||||||| Sbjct: 1524 caagaatggatgctcatgggcctct 1500
>gb|AC012147.7|AC012147 Mus musculus, clone RP23-191A4, complete sequence Length = 217034 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 caagaatggatgctcaagggcctct 280 |||||||||||||||| |||||||| Sbjct: 118654 caagaatggatgctcatgggcctct 118630
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 541 atgctccaaattttcatgggtttga 565 |||||||||||| |||||||||||| Sbjct: 1267775 atgctccaaattctcatgggtttga 1267799
>gb|AC154668.2| Mus musculus BAC clone RP24-285D22 from 13, complete sequence Length = 147595 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 tcatagcaagatgctccaaat 551 ||||||||||||||||||||| Sbjct: 29384 tcatagcaagatgctccaaat 29404
>ref|NM_008751.2| Mus musculus neurexophilin 1 (Nxph1), mRNA Length = 2678 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 caagaatggatgctcaagggcctct 280 |||||||||||||||| |||||||| Sbjct: 1524 caagaatggatgctcatgggcctct 1500
>gb|M64478.1|BACCRYIIIC Bacillus thuringiensis crystal protein (cryIIIC) gene, complete cds Length = 4004 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 aatgttctatgttttgcatca 371 ||||||||||||||||||||| Sbjct: 2591 aatgttctatgttttgcatca 2571
>gb|U04368.1|BTU04368 Bacillus thuringiensis kumamotoensis HD867 CryIII delta-endotoxin gene, partial cds Length = 3414 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 aatgttctatgttttgcatca 371 ||||||||||||||||||||| Sbjct: 2408 aatgttctatgttttgcatca 2388
>gb|U04367.1|BTU04367 Bacillus thuringiensis dakota HD511 CryIII delta-endotoxin gene, partial cds Length = 3414 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 aatgttctatgttttgcatca 371 ||||||||||||||||||||| Sbjct: 2408 aatgttctatgttttgcatca 2388
>gb|AC149232.2| Pan troglodytes BAC clone CH251-38H5 from 7, complete sequence Length = 184062 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gcagaatgttctatgttttg 366 |||||||||||||||||||| Sbjct: 115254 gcagaatgttctatgttttg 115273
>gb|AC161020.2| Pan troglodytes BAC clone CH251-19C5 from chromosome 7, complete sequence Length = 200756 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gcagaatgttctatgttttg 366 |||||||||||||||||||| Sbjct: 160776 gcagaatgttctatgttttg 160795
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 actaatttaattagcactcc 115 |||||||||||||||||||| Sbjct: 14083538 actaatttaattagcactcc 14083519
>gb|AC126553.4| Mus musculus BAC clone RP23-448L16 from chromosome 18, complete sequence Length = 184463 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agcagcccttggagaagatt 333 |||||||||||||||||||| Sbjct: 51433 agcagcccttggagaagatt 51452
>gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, complete sequence Length = 198281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gcagcccttggagaagattg 334 |||||||||||||||||||| Sbjct: 58583 gcagcccttggagaagattg 58602
>gb|AC112792.4| Mus musculus BAC clone RP23-192J17 from 18, complete sequence Length = 219784 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 agcagcccttggagaagatt 333 |||||||||||||||||||| Sbjct: 14299 agcagcccttggagaagatt 14280
>gb|AC125408.3| Mus musculus BAC clone RP23-94M23 from 3, complete sequence Length = 210519 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gcagcccttggagaagattg 334 |||||||||||||||||||| Sbjct: 49995 gcagcccttggagaagattg 49976
>gb|AC092447.5| Homo sapiens BAC clone RP11-760D2 from 7, complete sequence Length = 176547 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gcagaatgttctatgttttg 366 |||||||||||||||||||| Sbjct: 152155 gcagaatgttctatgttttg 152174
>gb|AC022202.12| Homo sapiens BAC clone RP11-321E8 from 7, complete sequence Length = 95097 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 gcagaatgttctatgttttg 366 |||||||||||||||||||| Sbjct: 12825 gcagaatgttctatgttttg 12806
>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0022F22, from chromosome 3, complete sequence Length = 144268 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 actaatttaattagcactcc 115 |||||||||||||||||||| Sbjct: 93217 actaatttaattagcactcc 93198
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 527 tccatcatagcaagatgctccaaattttcatgggtt 562 ||||||||||| ||||| |||| || |||||||||| Sbjct: 99101 tccatcatagccagatgttccatatgttcatgggtt 99136
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 579 ccgtgcagagttcaactagtatacaacc 606 ||||||| ||||||| |||||||||||| Sbjct: 172490 ccgtgcatagttcaaatagtatacaacc 172463
>emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BAC clone F4D11 (ESSAII project) Length = 101715 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 579 ccgtgcagagttcaactagtatacaacc 606 ||||||| ||||||| |||||||||||| Sbjct: 58581 ccgtgcatagttcaaatagtatacaacc 58608
>emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, complete sequence Length = 193197 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 agaatggatgctcaagggcc 277 |||||||||||||||||||| Sbjct: 126677 agaatggatgctcaagggcc 126696
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 ttctatgttttgcatcacaagatt 378 ||||||||||| |||||||||||| Sbjct: 57108 ttctatgttttccatcacaagatt 57131
>gb|AC023718.4| Drosophila melanogaster X BAC RP98-7P15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164415 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 ggatctcaagcacgtcatcttcgt 238 ||||||| |||||||||||||||| Sbjct: 90604 ggatctccagcacgtcatcttcgt 90581
>ref|NM_132490.2| Drosophila melanogaster CG1745-RB, transcript variant B (CG1745), mRNA Length = 2800 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 ggatctcaagcacgtcatcttcgt 238 ||||||| |||||||||||||||| Sbjct: 2321 ggatctccagcacgtcatcttcgt 2298
>gb|AC016884.10| Homo sapiens chromosome , clone RP11-350M7, complete sequence Length = 209320 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 attccatggaagagagaaca 136 |||||||||||||||||||| Sbjct: 155782 attccatggaagagagaaca 155801
>gb|AF104915.1|AF104915 Plasmodium falciparum protein serine/threonine kinase-1 (psk1) gene, complete cds Length = 3316 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 527 tccatcatagcaagatgctccaaattttcatgggtt 562 ||||||||||| ||||| |||| || |||||||||| Sbjct: 2492 tccatcatagccagatgttccatatgttcatgggtt 2457
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 actaatttaattagcactcc 115 |||||||||||||||||||| Sbjct: 14078513 actaatttaattagcactcc 14078494
>gb|AC150280.2| Pan troglodytes BAC clone CH251-20M5 from chromosome 7, complete sequence Length = 191966 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gcagaatgttctatgttttg 366 |||||||||||||||||||| Sbjct: 172429 gcagaatgttctatgttttg 172448
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 ttctatgttttgcatcacaagatt 378 ||||||||||| |||||||||||| Sbjct: 11831 ttctatgttttccatcacaagatt 11854
>emb|BX248399.5| Zebrafish DNA sequence from clone CH211-233A1 in linkage group 10, complete sequence Length = 158884 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 ctttctcacatatttctcac 473 |||||||||||||||||||| Sbjct: 40352 ctttctcacatatttctcac 40371
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 ttctatgttttgcatcacaagatt 378 ||||||||||| |||||||||||| Sbjct: 135533 ttctatgttttccatcacaagatt 135556
>gb|AF234652.1|AF234652 Mesembryanthemum crystallinum protein kinase MK5 mRNA, complete cds Length = 1738 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 518 agcaccctctccatcatagcaagatgctccaaattttcatgggtttgaaaca 569 ||||||||||||||||| ||||| | ||| || || ||||| ||||| |||| Sbjct: 1118 agcaccctctccatcattgcaaggtcctctaagttctcatgtgtttggaaca 1067
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 ggatctcaagcacgtcatcttcgt 238 ||||||| |||||||||||||||| Sbjct: 87832 ggatctccagcacgtcatcttcgt 87809
>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14, complete sequence Length = 164299 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 agaatggatgctcaagggcc 277 |||||||||||||||||||| Sbjct: 44363 agaatggatgctcaagggcc 44382
>gb|U73937.1|NTU73937 Nicotiana tabacum PK12 protein kinase (PK12) mRNA, complete cds Length = 1869 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 365 tgcatcacaagattctgaagccggggcagcttcataacag 404 |||||||| | ||||||||| || ||||||||||| |||| Sbjct: 1232 tgcatcaccaaattctgaagacgaggcagcttcatcacag 1193
>gb|L18965.1|YYYXYLRN Thermophillic bacterial sp. ORF1, 3' end; complete ORF2; xylose repressor protein (xylR) gene, complete cds; xynA gene, complete cds; complete ORF5; ORF6, 5' end Length = 6760 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 aagaaacatagcagatgcta 214 |||||||||||||||||||| Sbjct: 366 aagaaacatagcagatgcta 347 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,594,861 Number of Sequences: 3902068 Number of extensions: 5594861 Number of successful extensions: 108083 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107643 Number of HSP's gapped (non-prelim): 433 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)