ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107387.1| Zea mays PCO149313 mRNA sequence 119 5e-24
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 8e-17
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 8e-17
4gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare str... 96 8e-17
5dbj|AK099791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 8e-17
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
7dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
8dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
9dbj|AK105465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
10dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
11ref|NM_191406.1| Oryza sativa (japonica cultivar-group), predic... 90 5e-15
12gb|AC148919.1| Gallus gallus BAC clone CH261-43B19 from chromoso... 44 0.26
13gb|AC142329.1| Pan troglodytes BAC clone RP43-25D8 from 11, comp... 42 1.0
14dbj|D10511.2| Homo sapiens MAT gene for mitochondrial acetoacety... 42 1.0
15dbj|AP002433.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.0
16gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 4.0
17emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 i... 40 4.0
18gb|AC145866.3| Pan troglodytes BAC clone RP43-21B7 from 7, compl... 40 4.0
19emb|CR786580.6| Human DNA sequence from clone RP11-764K9 on chro... 40 4.0
20emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on ch... 40 4.0
21emb|AL772155.6| Human DNA sequence from clone RP11-149F8 on chro... 40 4.0
22emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chr... 40 4.0
23emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on ch... 40 4.0
24gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 4.0
25emb|AL354718.10| Human DNA sequence from clone RP11-187C18 on ch... 40 4.0
26emb|AL159159.21| Human DNA sequence from clone RP11-88J11 on chr... 40 4.0
27emb|CR391971.7| Zebrafish DNA sequence from clone CH211-260O6 in... 40 4.0
28emb|CR759923.6| Zebrafish DNA sequence from clone CH211-147L19 i... 40 4.0
29emb|AL592220.6| Human DNA sequence from clone RP11-12P21 on chro... 40 4.0
30emb|CR548622.8| Zebrafish DNA sequence from clone DKEY-189A9 in ... 40 4.0
31emb|CR385085.9| Zebrafish DNA sequence from clone CH211-195A16, ... 40 4.0
32emb|CR318610.8| Zebrafish DNA sequence from clone CH211-14B14 in... 40 4.0
33emb|BX530079.19| Zebrafish DNA sequence from clone DKEY-51A16 in... 40 4.0
34gb|AC120338.4| Homo sapiens X BAC RP11-791N19 (Roswell Park Canc... 40 4.0
35emb|BX294395.15| Zebrafish DNA sequence from clone CH211-220B11 ... 40 4.0
36emb|BX296526.5| Zebrafish DNA sequence from clone DKEY-229D2 in ... 40 4.0
37emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chr... 40 4.0
38emb|BX005463.5| Zebrafish DNA sequence from clone CH211-177H19 i... 40 4.0
39emb|BX649231.4| Zebrafish DNA sequence from clone DKEY-225H23 in... 40 4.0
40emb|BX005011.6| Zebrafish DNA sequence from clone CH211-59F19 in... 40 4.0
41gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 4.0 
>gb|AY107387.1| Zea mays PCO149313 mRNA sequence
          Length = 1336

 Score =  119 bits (60), Expect = 5e-24
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                        
Query: 198  acctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatc 257
            |||||||||||||||||||||||||||||| ||||| || | ||| ||||||||||||||
Sbjct: 1083 acctcaccgccccttggggttcatgatctgcgagaagacggcgctaggcgtcagcccatc 1024

                                                  
Query: 258  cgagtcgatgctngcgacactttggtcacccatgctta 295
            |||||| || || ||||| |||||||| ||||||||||
Sbjct: 1023 cgagtctatactcgcgacgctttggtcgcccatgctta 986
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                            
Query: 198      acctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatc 257
                ||||||||| |||||||||||||||||||| ||||| || |  || ||||||||||||||
Sbjct: 12284688 acctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagcccatc 12284629

                                                      
Query: 258      cgagtcgatgctngcgacactttggtcacccatgctta 295
                |||||| || || || ||||| || |||||||||||||
Sbjct: 12284628 cgagtcaatacttgcaacactctgctcacccatgctta 12284591



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 114      caaactcatgaaaatatgctgaatgaata 142
                |||||||||||| ||||||||||||||||
Sbjct: 12284753 caaactcatgaacatatgctgaatgaata 12284725
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                            
Query: 198      acctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatc 257
                ||||||||| |||||||||||||||||||| ||||| || |  || ||||||||||||||
Sbjct: 12281451 acctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagcccatc 12281392

                                                      
Query: 258      cgagtcgatgctngcgacactttggtcacccatgctta 295
                |||||| || || || ||||| || |||||||||||||
Sbjct: 12281391 cgagtcaatacttgcaacactctgctcacccatgctta 12281354



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 114      caaactcatgaaaatatgctgaatgaata 142
                |||||||||||| ||||||||||||||||
Sbjct: 12281516 caaactcatgaacatatgctgaatgaata 12281488
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>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                         
Query: 198   acctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatc 257
             ||||||||| |||||||||||||||||||| ||||| || |  || ||||||||||||||
Sbjct: 54221 acctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagcccatc 54162

                                                   
Query: 258   cgagtcgatgctngcgacactttggtcacccatgctta 295
             |||||| || || || ||||| || |||||||||||||
Sbjct: 54161 cgagtcaatacttgcaacactctgctcacccatgctta 54124



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 114   caaactcatgaaaatatgctgaatgaata 142
             |||||||||||| ||||||||||||||||
Sbjct: 54286 caaactcatgaacatatgctgaatgaata 54258
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>dbj|AK099791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097C16, full
            insert sequence
          Length = 3171

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                        
Query: 198  acctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatc 257
            ||||||||| |||||||||||||||||||| ||||| || |  || ||||||||||||||
Sbjct: 2927 acctcaccgtcccttggggttcatgatctgcgagaagacagcactaggcgtcagcccatc 2868

                                                  
Query: 258  cgagtcgatgctngcgacactttggtcacccatgctta 295
            |||||| || || || ||||| || |||||||||||||
Sbjct: 2867 cgagtcaatacttgcaacactctgctcacccatgctta 2830



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 114  caaactcatgaaaatatgctgaatgaata 142
            |||||||||||| ||||||||||||||||
Sbjct: 2992 caaactcatgaacatatgctgaatgaata 2964
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                            
Query: 200      ctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatccg 259
                ||||||| |||||||||||||||||||||||||| || | ||| || || ||||| || |
Sbjct: 32458055 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 32457996

                                                    
Query: 260      agtcgatgctngcgacactttggtcacccatgctta 295
                |||| ||||| || ||||||||||| ||||||||||
Sbjct: 32457995 agtctatgctagcaacactttggtcgcccatgctta 32457960



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 52       aaatatctaatntgaaacaattctctgacttc 83
                ||||||||||| || ||||| |||||||||||
Sbjct: 32458183 aaatatctaatatggaacaactctctgacttc 32458152
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>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665A11
          Length = 166421

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                         
Query: 200   ctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatccg 259
             ||||||| |||||||||||||||||||||||||| || | ||| || || ||||| || |
Sbjct: 45576 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 45517

                                                 
Query: 260   agtcgatgctngcgacactttggtcacccatgctta 295
             |||| ||||| || ||||||||||| ||||||||||
Sbjct: 45516 agtctatgctagcaacactttggtcgcccatgctta 45481



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 52    aaatatctaatntgaaacaattctctgacttc 83
             ||||||||||| || ||||| |||||||||||
Sbjct: 45704 aaatatctaatatggaacaactctctgacttc 45673
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>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1143G03
          Length = 137770

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                          
Query: 200    ctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatccg 259
              ||||||| |||||||||||||||||||||||||| || | ||| || || ||||| || |
Sbjct: 137552 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 137493

                                                  
Query: 260    agtcgatgctngcgacactttggtcacccatgctta 295
              |||| ||||| || ||||||||||| ||||||||||
Sbjct: 137492 agtctatgctagcaacactttggtcgcccatgctta 137457



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 52     aaatatctaatntgaaacaattctctgacttc 83
              ||||||||||| || ||||| |||||||||||
Sbjct: 137680 aaatatctaatatggaacaactctctgacttc 137649
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>dbj|AK105465.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A03, full
            insert sequence
          Length = 1761

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 200  ctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatccg 259
            ||||||| |||||||||||||||||||||||||| || | ||| || || ||||| || |
Sbjct: 1505 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 1446

                                                
Query: 260  agtcgatgctngcgacactttggtcacccatgctta 295
            |||| ||||| || ||||||||||| ||||||||||
Sbjct: 1445 agtctatgctagcaacactttggtcgcccatgctta 1410



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 52   aaatatctaatntgaaacaattctctgacttc 83
            ||||||||||| || ||||| |||||||||||
Sbjct: 1633 aaatatctaatatggaacaactctctgacttc 1602
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>dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064M23, full
            insert sequence
          Length = 3155

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 200  ctcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatccg 259
            ||||||| |||||||||||||||||||||||||| || | ||| || || ||||| || |
Sbjct: 2922 ctcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgg 2863

                                                
Query: 260  agtcgatgctngcgacactttggtcacccatgctta 295
            |||| ||||| || ||||||||||| ||||||||||
Sbjct: 2862 agtctatgctagcaacactttggtcgcccatgctta 2827



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 52   aaatatctaatntgaaacaattctctgacttc 83
            ||||||||||| || ||||| |||||||||||
Sbjct: 3050 aaatatctaatatggaacaactctctgacttc 3019
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>ref|NM_191406.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2691

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                        
Query: 201  tcaccgccccttggggttcatgatctgtgagaacaccgngcttggcgtcagcccatccga 260
            |||||| |||||||||||||||||||||||||| || | ||| || || ||||| || ||
Sbjct: 2691 tcaccgtcccttggggttcatgatctgtgagaagacagcgctaggagtaagcccgtcgga 2632

                                               
Query: 261  gtcgatgctngcgacactttggtcacccatgctta 295
            ||| ||||| || ||||||||||| ||||||||||
Sbjct: 2631 gtctatgctagcaacactttggtcgcccatgctta 2597
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>gb|AC148919.1| Gallus gallus BAC clone CH261-43B19 from chromosome unknown, complete
             sequence
          Length = 163278

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 64    tgaaacaattctctgacttcta 85
             ||||||||||||||||||||||
Sbjct: 52897 tgaaacaattctctgacttcta 52876
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>gb|AC142329.1| Pan troglodytes BAC clone RP43-25D8 from 11, complete sequence
          Length = 188643

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 110   agcacaaactcatgaaaatat 130
             |||||||||||||||||||||
Sbjct: 60366 agcacaaactcatgaaaatat 60346
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>dbj|D10511.2| Homo sapiens MAT gene for mitochondrial acetoacetyl-CoA thiolase,
           complete cds
          Length = 4392

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 agcacaaactcatgaaaatat 130
           |||||||||||||||||||||
Sbjct: 627 agcacaaactcatgaaaatat 607
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>dbj|AP002433.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-144G7, complete
              sequence
          Length = 165164

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    agcacaaactcatgaaaatat 130
              |||||||||||||||||||||
Sbjct: 105823 agcacaaactcatgaaaatat 105803
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 267    gctngcgacactttggtcaccca 289
              ||| |||||||||||||||||||
Sbjct: 619483 gctagcgacactttggtcaccca 619461
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>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
              complete sequence
          Length = 198600

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    atgaaaatatgctgaatgaa 140
              ||||||||||||||||||||
Sbjct: 104691 atgaaaatatgctgaatgaa 104710
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>gb|AC145866.3| Pan troglodytes BAC clone RP43-21B7 from 7, complete sequence
          Length = 189814

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   agacagcaagagcacaaactcatg 123
             ||||||||||||||||| ||||||
Sbjct: 91746 agacagcaagagcacaagctcatg 91723
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>emb|CR786580.6| Human DNA sequence from clone RP11-764K9 on chromosome 9 Contains two
              novel pseudogenes, a novel gene, a pseudogene similar to
              part of double homeobox, 4 (DUX4), a FSHD region gene 1
              (FRG1) pseudogene and four CpG islands, complete sequence
          Length = 191980

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    ctttggtcacccatgcttaa 296
              ||||||||||||||||||||
Sbjct: 173493 ctttggtcacccatgcttaa 173512
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>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains
             three novel pseudogenes, a pseudogene similar to part of
             meprin A, alpha (PABA peptide hydrolase) (MEP1A), a
             pseudogene similar to part of G protein-coupled receptor
             116 (GPR116), two novel genes, the 5' end of a novel gene
             similar to ankyrin repeat domain 20A (ANKRD20A) and three
             CpG islands, complete sequence
          Length = 165886

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   ctttggtcacccatgcttaa 296
             ||||||||||||||||||||
Sbjct: 83941 ctttggtcacccatgcttaa 83922
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>emb|AL772155.6| Human DNA sequence from clone RP11-149F8 on chromosome 9 Contains a
             novel gene, two novel pseudogenes, a  pseudogene similar
             to part of myosin V family protein, a tumor suppressor
             deleted in oral cancer-related 1 (DOC-1R) pseudogene, a
             pseudogene similar to part of prostaglandin E receptor 4
             (subtype EP4) (PTGER4) and a CpG island, complete sequence
          Length = 163569

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   ctttggtcacccatgcttaa 296
             ||||||||||||||||||||
Sbjct: 31823 ctttggtcacccatgcttaa 31842
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>emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chromosome 9 Contains two
              novel pseudogene, a CDRT15 protein pseudogene, a pseudogene
              similar to part of meprin A, alpha (PABA peptide hydrolase)
              (MEP1A) and two CpG islands, complete sequence
          Length = 178933

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    ctttggtcacccatgcttaa 296
              ||||||||||||||||||||
Sbjct: 136879 ctttggtcacccatgcttaa 136860
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>emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on chromosome 9 Contains a
              pseudogene similar to part of sorting nexin associated
              golgi protein 1 (SNAG1), the ANKRD20A gene for ankyrin
              repeat domain 20A, five novel genes, a pseudogene similar
              to part of eprin A, alpha (PABA peptide hydrolase) (MEP1A)
              and a CpG island, complete sequence
          Length = 180498

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    ctttggtcacccatgcttaa 296
              ||||||||||||||||||||
Sbjct: 170412 ctttggtcacccatgcttaa 170431
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 103     cagcaagagcacaaactcat 122
               ||||||||||||||||||||
Sbjct: 2367821 cagcaagagcacaaactcat 2367802
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>emb|AL354718.10| Human DNA sequence from clone RP11-187C18 on chromosome 9 Contains a
              pseudogene similar to part of ribosomal protein L7a
              (RPL7A), three novel genes, three novel pseudogene and two
              CpG islands, complete sequence
          Length = 175271

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    ctttggtcacccatgcttaa 296
              ||||||||||||||||||||
Sbjct: 172244 ctttggtcacccatgcttaa 172225
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>emb|AL159159.21| Human DNA sequence from clone RP11-88J11 on chromosome 13 Contains the
             3' end of the CDK8 gene for cyclin-dependent kinase 8,
             complete sequence
          Length = 144626

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   agcacaaactcatgaaaatatgct 133
             ||||||||| ||||||||||||||
Sbjct: 65285 agcacaaacccatgaaaatatgct 65308
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>emb|CR391971.7| Zebrafish DNA sequence from clone CH211-260O6 in linkage group 21,
            complete sequence
          Length = 129478

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  atgaaaatatgctgaatgaa 140
            ||||||||||||||||||||
Sbjct: 2764 atgaaaatatgctgaatgaa 2745
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>emb|CR759923.6| Zebrafish DNA sequence from clone CH211-147L19 in linkage group 21,
             complete sequence
          Length = 147564

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   atgaaaatatgctgaatgaa 140
             ||||||||||||||||||||
Sbjct: 41288 atgaaaatatgctgaatgaa 41269
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>emb|AL592220.6| Human DNA sequence from clone RP11-12P21 on chromosome 9 Contains a
             tumor suppressor deleted in oral cancer-related 1 (DOC-1R)
             pseudogene, a novel pseudogene and a CpG island, complete
             sequence
          Length = 163556

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   ctttggtcacccatgcttaa 296
             ||||||||||||||||||||
Sbjct: 31811 ctttggtcacccatgcttaa 31830
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>emb|CR548622.8| Zebrafish DNA sequence from clone DKEY-189A9 in linkage group 11,
             complete sequence
          Length = 137993

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   atgaaaatatgctgaatgaa 140
             ||||||||||||||||||||
Sbjct: 16675 atgaaaatatgctgaatgaa 16694
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>emb|CR385085.9| Zebrafish DNA sequence from clone CH211-195A16, complete sequence
          Length = 211060

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    atgaaaatatgctgaatgaa 140
              ||||||||||||||||||||
Sbjct: 156937 atgaaaatatgctgaatgaa 156956
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>emb|CR318610.8| Zebrafish DNA sequence from clone CH211-14B14 in linkage group 5,
              complete sequence
          Length = 164564

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    atgaaaatatgctgaatgaa 140
              ||||||||||||||||||||
Sbjct: 152626 atgaaaatatgctgaatgaa 152607
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>emb|BX530079.19| Zebrafish DNA sequence from clone DKEY-51A16 in linkage group 13,
              complete sequence
          Length = 166397

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    atgaaaatatgctgaatgaa 140
              ||||||||||||||||||||
Sbjct: 141164 atgaaaatatgctgaatgaa 141145
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>gb|AC120338.4| Homo sapiens X BAC RP11-791N19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109001

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   aaaatatgctgaatgaataa 143
             ||||||||||||||||||||
Sbjct: 94435 aaaatatgctgaatgaataa 94454
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>emb|BX294395.15| Zebrafish DNA sequence from clone CH211-220B11 in linkage group 5,
             complete sequence
          Length = 213232

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   atgaaaatatgctgaatgaa 140
             ||||||||||||||||||||
Sbjct: 65218 atgaaaatatgctgaatgaa 65237
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>emb|BX296526.5| Zebrafish DNA sequence from clone DKEY-229D2 in linkage group 5,
             complete sequence
          Length = 179086

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   atgaaaatatgctgaatgaa 140
             ||||||||||||||||||||
Sbjct: 19761 atgaaaatatgctgaatgaa 19742
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>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete
             sequence
          Length = 219376

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   ctttggtcacccatgcttaa 296
             ||||||||||||||||||||
Sbjct: 90460 ctttggtcacccatgcttaa 90441
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>emb|BX005463.5| Zebrafish DNA sequence from clone CH211-177H19 in linkage group 6,
             complete sequence
          Length = 163804

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   atgaaaatatgctgaatgaa 140
             ||||||||||||||||||||
Sbjct: 47713 atgaaaatatgctgaatgaa 47694
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>emb|BX649231.4| Zebrafish DNA sequence from clone DKEY-225H23 in linkage group 20,
             complete sequence
          Length = 153569

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   atgaaaatatgctgaatgaa 140
             ||||||||||||||||||||
Sbjct: 62267 atgaaaatatgctgaatgaa 62248
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>emb|BX005011.6| Zebrafish DNA sequence from clone CH211-59F19 in linkage group 23,
              complete sequence
          Length = 178148

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    atgaaaatatgctgaatgaa 140
              ||||||||||||||||||||
Sbjct: 129196 atgaaaatatgctgaatgaa 129177
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    agcagacccagatttttacc 195
              ||||||||||||||||||||
Sbjct: 165101 agcagacccagatttttacc 165120


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,912,827
Number of Sequences: 3902068
Number of extensions: 1912827
Number of successful extensions: 31426
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31313
Number of HSP's gapped (non-prelim): 113
length of query: 308
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 286
effective length of database: 17,147,199,772
effective search space: 4904099134792
effective search space used: 4904099134792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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