Clone Information

BLAST Search Result

Clone Name	rbags16n02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y5621_ARATH (O81488) PHD finger protein At5g26210	94	3e-19
2	PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)	50	3e-06
3	PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)	50	3e-06
4	PHF8_HUMAN (Q9UPP1) PHD finger protein 8	50	4e-06
5	PHF8_MOUSE (Q80TJ7) PHD finger protein 8	50	4e-06
6	K1718_HUMAN (Q6ZMT4) Protein KIAA1718	49	7e-06
7	K1718_MOUSE (Q3UWM4) Protein KIAA1718	48	2e-05
8	DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-...	47	3e-05
9	DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-...	47	3e-05
10	CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC do...	45	2e-04
11	CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC do...	45	2e-04
12	ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC ...	44	3e-04
13	PHF3_HUMAN (Q92576) PHD finger protein 3	42	0.002
14	SPP1_SCHPO (O74508) Set1 complex component spp1 (Set1C component...	40	0.006
15	YKA5_YEAST (P36106) Hypothetical 67.9 kDa protein RPL14A-AUR1 in...	39	0.013
16	JHD1_DEBHA (Q6BXJ4) JmjC domain-containing histone demethylation...	38	0.017
17	LID2_SCHPO (Q9HDV4) Lid2 complex component lid2 (Lid2C component...	37	0.029
18	PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE ...	37	0.038
19	MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1	37	0.050
20	PYGO2_HUMAN (Q9BRQ0) Pygopus homolog 2	36	0.065
21	CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6 (CYC...	35	0.14
22	ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC ...	35	0.19
23	JHD1_YEAST (P40034) JmjC domain-containing histone demethylation...	35	0.19
24	JHD1_EMENI (Q5AW75) JmjC domain-containing histone demethylation...	35	0.19
25	SPP1_YEAST (Q03012) COMPASS component SPP1 (Complex proteins ass...	35	0.19
26	TCF19_PIG (Q9TSV4) Transcription factor 19 (Transcription factor...	34	0.32
27	HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li...	33	0.55
28	PYGO1_MOUSE (Q9D0P5) Pygopus homolog 1	33	0.55
29	PYGO1_HUMAN (Q9Y3Y4) Pygopus homolog 1	33	0.55
30	JHD1_CANAL (Q5A847) JmjC domain-containing histone demethylation...	33	0.55
31	GP101_MOUSE (Q80T62) Probable G-protein coupled receptor 101	32	0.94
32	ATG3_CRYNE (Q5K9X6) Autophagy-related protein 3 (Autophagy-relat...	32	1.2
33	TCF19_PANTR (Q7YR48) Transcription factor 19 (Transcription fact...	32	1.2
34	TCF19_MACMU (Q5TM48) Transcription factor 19	32	1.2
35	TCF19_HUMAN (Q9Y242) Transcription factor 19 (Transcription fact...	32	1.2
36	JHD1_YARLI (Q6C423) JmjC domain-containing histone demethylation...	32	1.2
37	JAD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (...	32	1.6
38	SET4_YEAST (P42948) SET domain protein 4	32	1.6
39	JAD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (...	31	2.1
40	JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (...	31	2.1
41	HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)	31	2.1
42	Y1342_ARATH (Q9C810) PHD finger protein At1g33420	31	2.1
43	MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4)	31	2.1
44	JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (...	31	2.1
45	ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11	31	2.1
46	JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation...	31	2.7
47	RAPSN_CHICK (O42393) 43 kDa receptor-associated protein of the s...	31	2.7
48	JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (...	31	2.7
49	YA27_SCHPO (Q09698) Hypothetical protein C2F7.07c in chromosome I	31	2.7
50	CHD3_DROME (O16102) Chromodomain helicase-DNA-binding protein 3 ...	31	2.7
51	PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) ...	30	3.6
52	OR4C3_HUMAN (Q8NH37) Olfactory receptor 4C3 (Olfactory receptor ...	30	4.6
53	ATXR5_ARATH (Q8VZJ1) Histone-lysine N-methyltransferase ATXR5 (E...	30	4.6
54	SET3_SCHPO (Q10362) SET domain-containing protein 3	30	6.1
55	MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia p...	30	6.1
56	MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia p...	30	6.1
57	JAD1A_HUMAN (P29375) Jumonji/ARID domain-containing protein 1A (...	29	7.9
58	CYC02_CATRO (P25923) CYC02 protein	29	7.9
59	BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain ...	29	7.9
60	MMSA_DROME (Q7KW39) Probable methylmalonate-semialdehyde dehydro...	29	7.9
61	PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)	29	7.9

>Y5621_ARATH (O81488) PHD finger protein At5g26210|
          Length = 255

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 39/56 (69%), Positives = 45/56 (80%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNCXXXSKRARA 346
           CGAC ++Y  DEF ICCD C  WFHGKCVKITPA+AEHIK YKCP+C   +KRAR+
Sbjct: 202 CGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSC--SNKRARS 255

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>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)|
          Length = 1101

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 21/44 (47%), Positives = 23/44 (52%)
 Frame = -2

Query: 504 CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           C   Y    F I CDAC  WFHG CV +   +A  I  Y CPNC
Sbjct: 10  CRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNC 53

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>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)|
          Length = 1096

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 21/44 (47%), Positives = 23/44 (52%)
 Frame = -2

Query: 504 CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           C   Y    F I CDAC  WFHG CV +   +A  I  Y CPNC
Sbjct: 10  CRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNC 53

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>PHF8_HUMAN (Q9UPP1) PHD finger protein 8|
          Length = 1060

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/44 (47%), Positives = 22/44 (50%)
 Frame = -2

Query: 504 CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           C   Y    F I CD C  WFHG CV +   KA  I  Y CPNC
Sbjct: 46  CRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 89

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>PHF8_MOUSE (Q80TJ7) PHD finger protein 8|
          Length = 1023

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/44 (47%), Positives = 22/44 (50%)
 Frame = -2

Query: 504 CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           C   Y    F I CD C  WFHG CV +   KA  I  Y CPNC
Sbjct: 10  CRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53

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>K1718_HUMAN (Q6ZMT4) Protein KIAA1718|
          Length = 941

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = -2

Query: 504 CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           C   Y  + F I CD C  WFHG CV +    A  I  Y CPNC
Sbjct: 42  CRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNC 85

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>K1718_MOUSE (Q3UWM4) Protein KIAA1718|
          Length = 940

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -2

Query: 504 CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           C   Y  + F I CD C  WFHG CV +    A  I  Y CP+C
Sbjct: 42  CRQPYDVNRFMIECDVCKDWFHGSCVGVEEHHAVDIDLYHCPDC 85

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>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated|
           transcription factor 1) (DATF-1) (hDido1)
          Length = 2240

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = -2

Query: 483 DEFXICCDACXTWFHGKCVKITPAKAEHIKH----YKCPNC 373
           + F ICCD C  WFHG CV I+ A+   ++     Y CPNC
Sbjct: 279 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319

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>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated|
           transcription factor 1) (DATF-1) (Fragments)
          Length = 1956

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = -2

Query: 483 DEFXICCDACXTWFHGKCVKITPAKAEHIKH----YKCPNC 373
           + F ICCD C  WFHG CV I+ A+   ++     Y CPNC
Sbjct: 276 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 316

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>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 660

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -2

Query: 477 FXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNCXXXSKRARA*YR 337
           F I CD C  WFHG C++IT   A+ I+ + C  C     +    YR
Sbjct: 39  FMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEIRYR 85

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>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 656

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -2

Query: 477 FXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNCXXXSKRARA*YR 337
           F I CD C  WFHG C++IT   A+ I+ + C  C     +    YR
Sbjct: 39  FMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEIRYR 85

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>ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC 2.1.1.43)|
           (Trithorax-homolog protein 3) (TRX-homolog protein 3)
           (Protein SET DOMAIN GROUP 14)
          Length = 902

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = -2

Query: 513 CGACNDNY--GQDEFXICCDACXTWFHGKCVKITPAKAEHIKH--YKCPNC 373
           CG C   +    D   +CCD C  W H +C  IT  + + ++H  Y CP+C
Sbjct: 351 CGICKRIWHPSDDGDWVCCDGCDVWVHAECDNITNERFKELEHNNYYCPDC 401

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>PHF3_HUMAN (Q92576) PHD finger protein 3|
          Length = 2039

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHI----KHYKCPNC 373
           CG C   +G + F + C  C  WFHG CV ++ ++A+ +    K Y C  C
Sbjct: 720 CGFCKKPHG-NRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKC 769

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>SPP1_SCHPO (O74508) Set1 complex component spp1 (Set1C component spp1)|
           (COMPASS component spp1) (Complex proteins associated
           with set1 protein spp1)
          Length = 424

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -2

Query: 465 CDACXTWFHGKCVKITPAKAEHIKHYKCPNCXXXSK 358
           CD C  WFHG CV I  +  +    Y CP C    K
Sbjct: 135 CDGCEDWFHGTCVNIPESYNDLTVQYFCPKCTEEGK 170

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>YKA5_YEAST (P36106) Hypothetical 67.9 kDa protein RPL14A-AUR1 intergenic|
           region
          Length = 594

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
 Frame = -2

Query: 522 KALCGACNDNYGQDEFX----ICCDACXTWFHGKCV-----KITPAKAEHIKHYKCPNC 373
           + LCGA N+NY   E+     + CD C TW H KC+      I    +E  K+Y C  C
Sbjct: 74  RCLCGANNENYDAAEYSHGDMVQCDGCDTWQHIKCMTDGKDTIDGLMSEDSKYY-CELC 131

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>JHD1_DEBHA (Q6BXJ4) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 514

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 465 CDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           CD C  WFH  C+KI   +  ++  Y C  C
Sbjct: 29  CDICNQWFHASCLKIPKIEVNNLHSYHCEGC 59

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>LID2_SCHPO (Q9HDV4) Lid2 complex component lid2 (Lid2C component lid2)|
          Length = 1513

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -2

Query: 513  CGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
            C  C     +    I C+ C  W+H KC+K++  K    + + CP C
Sbjct: 1096 CIFCFCRLPESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPIC 1142



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -2

Query: 504  CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
            C + +   +  I C  C   FH  CV +    A+ +  + CP C
Sbjct: 1357 CGEEFSPRDSFIDCTICERRFHYDCVGLNNEIADSVSKFTCPIC 1400

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>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)|
           (Protein GYMNOS)
          Length = 1384

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           C AC    G+    + C+ C   FH KC+ + P K   +++++CP C
Sbjct: 52  CQAC----GESTNLVSCNTCTYAFHAKCL-VPPLKDASVENWRCPEC 93

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>MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1|
          Length = 1588

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -2

Query: 504  CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
            C   +   +  + C  C  WFH +CV ++      + +Y CP+C
Sbjct: 1459 CRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYACPDC 1502



 Score = 36.6 bits (83), Expect = 0.050
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 465  CDACXTWFHGKCVKITPAKAEHIKHYKCPNCXXXSKRARA*YRIP 331
            C+ C  W+H KC+K++  K    + + CP C    +  R  +R P
Sbjct: 1187 CELCHEWYHAKCMKMSKKKLRADEKFICPICDYRVEVPRHSHRPP 1231

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>PYGO2_HUMAN (Q9BRQ0) Pygopus homolog 2|
          Length = 406

 Score = 36.2 bits (82), Expect = 0.065
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDA-CXTWFHGKCVKIT 418
           CGAC      D+  I C+A C  WFH +C  +T
Sbjct: 330 CGACRSEVNDDQDAILCEASCQKWFHRECTGMT 362

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>CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6|
           (CYC8-TUP1-interacting protein 6)
          Length = 506

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -2

Query: 522 KALCGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           + +CG   D      F I C+ C +W HG CV IT   A     Y C  C
Sbjct: 74  RCICGEL-DTPDDSGFFIQCEQCSSWQHGYCVSITQDNAP--DKYWCEQC 120

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>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)|
           (Trithorax-homolog protein 5) (TRX-homolog protein 5)
           (Protein SET DOMAIN GROUP 29)
          Length = 1043

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = -2

Query: 522 KALCGACND--NYGQDEFXICCDACXTWFHGKCVKITPAKAEHI--KHYKCPNC 373
           K +CG C    N+   +  + CD C  W H  C +I+    + +    Y CP C
Sbjct: 413 KHVCGICKRIWNHLDSQSWVRCDGCKVWIHSACDQISHKHFKDLGETDYYCPTC 466

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>JHD1_YEAST (P40034) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-) (ScJHDM1)
          Length = 492

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 15/45 (33%)
 Frame = -2

Query: 465 CDACXTWFHGKCVKIT---------------PAKAEHIKHYKCPN 376
           CD+C  W H KCV +                P  A+ IK Y+CPN
Sbjct: 24  CDSCPQWVHVKCVPLKRIHYSNLTSSEVLSYPNSAKQIKSYRCPN 68

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>JHD1_EMENI (Q5AW75) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 1407

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
 Frame = -2

Query: 522 KALCGACN------DNYGQDEFXICCDACXTWFHGKCVKI-TPAKAEHIKHYKCPNC 373
           +A C  CN      DN  QD   I CD C  WFH  C       +   +  + C  C
Sbjct: 323 QASCATCNLVRIPVDNEDQDVTWISCDGCKRWFHIVCAGFKNDRETRTVDKFICKTC 379

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>SPP1_YEAST (Q03012) COMPASS component SPP1 (Complex proteins associated with|
           SET1 protein SPP1) (Set1C component SPP1) (Suppressor of
           PRP protein 1)
          Length = 353

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 11/54 (20%)
 Frame = -2

Query: 501 NDNYGQDEFXIC-----------CDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           N   G+D + IC           CD C  WFH  C+ I     + +  + CP C
Sbjct: 16  NPTTGEDVYCICKRPDYGELMVGCDGCDDWFHFTCLHIPEQFKDLVFSFYCPYC 69

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>TCF19_PIG (Q9TSV4) Transcription factor 19 (Transcription factor SC1)|
          Length = 346

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 465 CDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           CD C TWFH  CV  +   A+    ++CP C
Sbjct: 311 CDGCDTWFHVACVGCSIQAAKE-ADFRCPGC 340

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>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
 Frame = -2

Query: 516  LCGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKH------YKCPNC 373
            LC  C D+   +   + C  C  W H KC  ++    E + +      Y C NC
Sbjct: 1571 LCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNC 1624

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>PYGO1_MOUSE (Q9D0P5) Pygopus homolog 1|
          Length = 417

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDA-CXTWFHGKCVKIT 418
           CG C +    D+  I C+A C  WFH  C  +T
Sbjct: 341 CGICTNEVNDDQDAILCEASCQKWFHRICTGMT 373

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>PYGO1_HUMAN (Q9Y3Y4) Pygopus homolog 1|
          Length = 419

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDA-CXTWFHGKCVKIT 418
           CG C +    D+  I C+A C  WFH  C  +T
Sbjct: 343 CGICTNEVNDDQDAILCEASCQKWFHRICTGMT 375

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>JHD1_CANAL (Q5A847) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 478

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 471 ICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           I C  C  W+H  C+ +   + + I  Y CP C
Sbjct: 33  IQCSKCKVWYHVHCLDLPTDEIDQIVIYHCPEC 65

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>GP101_MOUSE (Q80T62) Probable G-protein coupled receptor 101|
          Length = 511

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 281 MWDGMPNVDVHSVVALRLVPALGVLLCCYSVYVGDA 174
           +W   P   V SVV+  ++P LGV++ CYSV  G A
Sbjct: 185 IWGASPAYTVVSVVSFLVIP-LGVMIACYSVVFGAA 219

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>ATG3_CRYNE (Q5K9X6) Autophagy-related protein 3 (Autophagy-related E2-like|
           conjugation enzyme ATG3)
          Length = 385

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = +1

Query: 220 AGTNLKA--TTECTSTLGIPSHMRLYSKSNSWIFTHEPWRNPISCSGPLATAAAIRAFVV 393
           AG NL    T +C     I S+ + Y     W+F ++  +NP++ +       A  AF  
Sbjct: 204 AGKNLLQVRTYDC-----IISYDKHYQTPRFWLFGYDEHKNPLTPAQVFQDVPADHAFKT 258

Query: 394 LDVLSFGRSDLHTLTVEPC 450
           + + SF  S     +V PC
Sbjct: 259 MTMESFPHSGAQLASVHPC 277

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>TCF19_PANTR (Q7YR48) Transcription factor 19 (Transcription factor SC1)|
          Length = 345

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 465 CDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           CD C  WFH  CV  +  +A     ++CP C
Sbjct: 310 CDGCDVWFHVACVGCS-IQAAREADFRCPGC 339

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>TCF19_MACMU (Q5TM48) Transcription factor 19|
          Length = 345

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 465 CDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           CD C  WFH  CV  +  +A     ++CP C
Sbjct: 310 CDGCDVWFHVACVGCS-IQAAREADFRCPGC 339

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>TCF19_HUMAN (Q9Y242) Transcription factor 19 (Transcription factor SC1)|
          Length = 345

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 465 CDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           CD C  WFH  CV  +  +A     ++CP C
Sbjct: 310 CDGCDVWFHVACVGCS-IQAAREADFRCPGC 339

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>JHD1_YARLI (Q6C423) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 510

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 465 CDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           CD C  W H  CV IT   +     Y CP C
Sbjct: 22  CDGCDRWVHDVCVSITDPVS--YAKYHCPTC 50

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>JAD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (SmcX protein)|
            (Xe169 protein)
          Length = 1560

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 465  CDACXTWFHGKCVKI 421
            CD C  WFHG+CV +
Sbjct: 1202 CDLCQDWFHGRCVSV 1216

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>SET4_YEAST (P42948) SET domain protein 4|
          Length = 560

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 504 CNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKH-YKCPNCXXXSK 358
           C  +  +DE  I C+ C TW H  C      K++ IK  + C  C   +K
Sbjct: 165 CGSSDSKDELFIQCNKCKTWQHKLCYAF--KKSDPIKRDFVCKRCDSDTK 212

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>JAD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (SmcX protein)|
            (Xe169 protein)
          Length = 1554

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 465  CDACXTWFHGKCVKI 421
            CD C  WFHG+CV +
Sbjct: 1202 CDLCQDWFHGRCVTV 1216

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>JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
            (Histocompatibility Y antigen) (H-Y)
          Length = 1539

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 465  CDACXTWFHGKCVKI 421
            CD C  WFHG+CV +
Sbjct: 1189 CDLCQDWFHGQCVSV 1203

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>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)|
          Length = 3866

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 9/57 (15%)
 Frame = -2

Query: 516  LCGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIK---------HYKCPNC 373
            LC  C D+   +   + C  C  W H KC  ++  + E  +          Y C NC
Sbjct: 1470 LCDKCYDDDDYESKMMQCGKCDRWVHSKCESLSGTEDEMYEILSNLPESVAYTCVNC 1526

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>Y1342_ARATH (Q9C810) PHD finger protein At1g33420|
          Length = 697

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           CG  +D+    E  + CD C  W H +C+ I  A A   K + C  C
Sbjct: 608 CGTKDDD---GERMLACDGCGVWHHTRCIGINNADALPSK-FLCFRC 650

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>MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4)|
          Length = 1125

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/65 (27%), Positives = 27/65 (41%)
 Frame = +1

Query: 91  KSPEQGTDKAPKTYKLLQLVATATSKSRASPTYTE*QHSKTPKAGTNLKATTECTSTLGI 270
           K P    +K  K     Q   T+TSK++  PT    Q + T   G N K  +  + ++  
Sbjct: 662 KEPPPSPEKKAKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTSGGLNKKPMSLASGSVPA 721

Query: 271 PSHMR 285
             H R
Sbjct: 722 APHKR 726

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>JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
          Length = 1535

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 465  CDACXTWFHGKCVKI 421
            CD C  WFHG+CV +
Sbjct: 1189 CDLCQDWFHGQCVSV 1203

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>ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11|
          Length = 562

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 471 ICCDACXTWFHGKCVKITPAKAEHIKHYKCPNCXXXSKR 355
           + CD C   +H KC+       +   H++CP C    K+
Sbjct: 73  LICDLCFRVYHSKCLSDEFRLRDSSSHWQCPVCRSIKKK 111

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>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 669

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 510 GACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           GA +D     E  ICC  C TWFH  C+ I     +    + C  C
Sbjct: 84  GAASDR----ETWICCTHCKTWFH--CICIGLENPDDFSKWYCQPC 123

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>RAPSN_CHICK (O42393) 43 kDa receptor-associated protein of the synapse (RAPsyn)|
           (Acetylcholine receptor-associated 43 kDa protein) (43
           kDa postsynaptic protein)
          Length = 411

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           CG C ++ G+    +    C  +FH KC++    +        CPNC
Sbjct: 362 CGMCGESIGEKNNQLQALPCSHFFHLKCLQTNGTRG-------CPNC 401

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>JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
            (Histocompatibility Y antigen) (H-Y)
          Length = 1548

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 465  CDACXTWFHGKCVKI 421
            CD C  WFHG+CV +
Sbjct: 1197 CDLCHDWFHGQCVTV 1211

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>YA27_SCHPO (Q09698) Hypothetical protein C2F7.07c in chromosome I|
          Length = 607

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 516 LCGACNDNYGQDEFXICCDACXTWFHGKCVKITPAK-AEHIKHYKCPN 376
           LC  C+ +    +  + CD C +++H  C+    A    +++ +KCPN
Sbjct: 408 LCFRCHKSALVSQSILACDYCNSYWHPDCLNPPLATLPSNLRKWKCPN 455

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>CHD3_DROME (O16102) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)|
           (ATP-dependent helicase Chd3)
          Length = 892

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           C  C+D  G D   +CCD+C + +H  C+   P K+     + CP C
Sbjct: 38  CKVCSD--GGD--LLCCDSCPSVYHRTCLS-PPLKSIPKGDWICPRC 79

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>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous|
           T-cell lymphoma associated antigen se14-3) (CTCL tumor
           antigen se14-3) (Zinc finger MYND domain containing
           protein 8)
          Length = 1186

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 471 ICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           +CC+ C   +H KC+++T   +E    + CP C
Sbjct: 101 LCCELCPRVYHAKCLRLT---SEPEGDWFCPEC 130

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>OR4C3_HUMAN (Q8NH37) Olfactory receptor 4C3 (Olfactory receptor OR11-98)|
          Length = 302

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/76 (31%), Positives = 38/76 (50%)
 Frame = -3

Query: 254 VHSVVALRLVPALGVLLCCYSVYVGDALDLLVAVATNCNSLYVLGALSVPCSGLLVS*FQ 75
           +HS+V L LV  L +  C  +V    A DL   +   C + YV+G L V  SGL+     
Sbjct: 152 LHSLVQLLLV--LWLPFCGPNVINHFACDLYPLLEVACTNTYVIGLLVVANSGLIC--LL 207

Query: 74  RCIMSSCTLVVICWRI 27
             +M + + +VI + +
Sbjct: 208 NFLMLAASYIVILYSL 223

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>ATXR5_ARATH (Q8VZJ1) Histone-lysine N-methyltransferase ATXR5 (EC 2.1.1.43)|
           (Trithorax-related protein 5) (TRX-related protein 5)
           (Protein SET DOMAIN GROUP 15)
          Length = 352

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 513 CGACNDNYGQDEFXICCDACXTWFHGKCVK 424
           C  C    G DE  +C D C   FH KC++
Sbjct: 67  CEKCGSGEGDDELLLC-DKCDRGFHMKCLR 95

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>SET3_SCHPO (Q10362) SET domain-containing protein 3|
          Length = 859

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 483 DEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           D F I C++C  W H  CV I        + Y C  C
Sbjct: 14  DGFTIQCESCEVWQHAVCVNIDANNVP--EKYFCEQC 48

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>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3|
           homolog (Histone-lysine N-methyltransferase, H3 lysine-4
           specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 516 LCGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           +C  C  + G+D   + CD C   +H  C++    K+     +KC NC
Sbjct: 390 VCQNCKQS-GEDSKMLVCDTCDKGYHTFCLQ-PVMKSVPTNGWKCKNC 435

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>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3|
           homolog (Histone-lysine N-methyltransferase, H3 lysine-4
           specific MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 516 LCGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAEHIKHYKCPNC 373
           +C  C  + G+D   + CD C   +H  C++    K+     +KC NC
Sbjct: 389 VCQNCKQS-GEDSKMLVCDTCDKGYHTFCLQ-PVMKSVPTNGWKCKNC 434

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>JAD1A_HUMAN (P29375) Jumonji/ARID domain-containing protein 1A|
            (Retinoblastoma-binding protein 2) (RBBP-2)
          Length = 1722

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 9/44 (20%)
 Frame = -2

Query: 477  FXICCDACXTWFHGKCVKITPA---------KAEHIKHYKCPNC 373
            F + C+ C  WFH  CV +  +         +A+ +K + CP C
Sbjct: 1173 FMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVK-FLCPLC 1215

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>CYC02_CATRO (P25923) CYC02 protein|
          Length = 101

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 468 CCDACXTWFHGKCVKITPA 412
           C   C  WFHG+C++  P+
Sbjct: 82  CRHGCCRWFHGRCIRCCPS 100

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>BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain protein 1B|
            (Williams-Beuren syndrome chromosome region 9 protein)
            (WBRS9) (Williams syndrome transcription factor) (hWALP2)
          Length = 1483

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -2

Query: 519  ALCGACNDNYGQDEFXICCDACXTWFHGKCVKITPAKAE-HIKHYKCPNCXXXSKR 355
            A C  C    G+D+  I CD C   FH  C++  PA  E     ++CP C   + R
Sbjct: 1185 ARCKVCRKK-GEDDKLILCDECNKAFHLFCLR--PALYEVPDGEWQCPACQPATAR 1237

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>MMSA_DROME (Q7KW39) Probable methylmalonate-semialdehyde dehydrogenase|
           [acylating], mitochondrial precursor (EC 1.2.1.27)
           (MMSDH) (Malonate-semialdehyde dehydrogenase
           [acylating]) (EC 1.2.1.18)
          Length = 520

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 292 SKSNSWIFTHEPWRNPISCSGPLATAAAIRA 384
           SK+N WI  H+P  N +    P AT A ++A
Sbjct: 37  SKTNEWIDVHDPATNQVVTRVPKATQAEMQA 67

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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = -2

Query: 513 CGAC----NDNYGQDEFXICCDACXTWFHGKCVKITPA 412
           CG C    NDN   DE   C   C  +FH  CV +T A
Sbjct: 750 CGMCHKEVNDN---DEAVFCESGCNFFFHRTCVGLTEA 784


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,617,207
Number of Sequences: 219361
Number of extensions: 1449459
Number of successful extensions: 4081
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 3857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4070
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result