| Clone Name | rbags16m23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GLTP_HUMAN (Q9NZD2) Glycolipid transfer protein (GLTP) | 54 | 3e-07 | 2 | GLTP_MOUSE (Q9JL62) Glycolipid transfer protein (GLTP) | 53 | 6e-07 | 3 | GLTP_PIG (P68266) Glycolipid transfer protein (GLTP) | 52 | 9e-07 | 4 | GLTP_BOVIN (P68265) Glycolipid transfer protein (GLTP) | 52 | 9e-07 |
|---|
>GLTP_HUMAN (Q9NZD2) Glycolipid transfer protein (GLTP)| Length = 208 Score = 53.9 bits (128), Expect = 3e-07 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%) Frame = -2 Query: 575 YSSDPAKYEHLYTMVQEXVEKKXAKGSS-SCTNVLLWLTRAMDFLVELFRNMLD------ 417 Y ++PAK+ L +++ E A+ T L+WL R + F+ +++ D Sbjct: 59 YDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDEN 118 Query: 416 HPDWTMSQACTDSYXKTLKKWHGWLASSSFTVAMKLAPNKDKFMXVIS 273 HP+ A T +Y LKK+HGW+ F A+ AP K F+ +S Sbjct: 119 HPNLIRVNA-TKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALS 165
>GLTP_MOUSE (Q9JL62) Glycolipid transfer protein (GLTP)| Length = 208 Score = 53.1 bits (126), Expect = 6e-07 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 7/108 (6%) Frame = -2 Query: 575 YSSDPAKYEHLYTMVQEXVEKKXAKGSS-SCTNVLLWLTRAMDFLVELFRNMLD------ 417 Y +DPAK++ L +++ A+ T LLWL R + F+ +++ D Sbjct: 59 YDTDPAKFKTLQNILEVEKGMYGAEWPKVGATLALLWLKRGLRFIQVFLQSICDGERDEN 118 Query: 416 HPDWTMSQACTDSYXKTLKKWHGWLASSSFTVAMKLAPNKDKFMXVIS 273 HP+ A +Y LKK+HGWL F A+ AP K F+ +S Sbjct: 119 HPNLIRVNA-NKAYEMALKKYHGWLVQKIFKAALYAAPYKSDFLKALS 165
>GLTP_PIG (P68266) Glycolipid transfer protein (GLTP)| Length = 208 Score = 52.4 bits (124), Expect = 9e-07 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 7/108 (6%) Frame = -2 Query: 575 YSSDPAKYEHLYTMVQEXVEKKXAKGSS-SCTNVLLWLTRAMDFLVELFRNMLD------ 417 Y ++P K+ L +++ E A+ T L+WL R + F+ +++ D Sbjct: 59 YDTNPTKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDEN 118 Query: 416 HPDWTMSQACTDSYXKTLKKWHGWLASSSFTVAMKLAPNKDKFMXVIS 273 HP+ A T +Y LKK+HGW+ F A+ AP K F+ +S Sbjct: 119 HPNLIRVNA-TKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALS 165
>GLTP_BOVIN (P68265) Glycolipid transfer protein (GLTP)| Length = 208 Score = 52.4 bits (124), Expect = 9e-07 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 7/108 (6%) Frame = -2 Query: 575 YSSDPAKYEHLYTMVQEXVEKKXAKGSS-SCTNVLLWLTRAMDFLVELFRNMLD------ 417 Y ++P K+ L +++ E A+ T L+WL R + F+ +++ D Sbjct: 59 YDTNPTKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDEN 118 Query: 416 HPDWTMSQACTDSYXKTLKKWHGWLASSSFTVAMKLAPNKDKFMXVIS 273 HP+ A T +Y LKK+HGW+ F A+ AP K F+ +S Sbjct: 119 HPNLIRVNA-TKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALS 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,981,606 Number of Sequences: 219361 Number of extensions: 1337785 Number of successful extensions: 2814 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2781 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2814 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)