ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags17b16 |
|---|---|
| Clone Library Name | barley_pub |
>RS19_ORYSA (P40978) 40S ribosomal protein S19| Length = 146 Score = 217 bits (553), Expect = 1e-56 Identities = 104/113 (92%), Positives = 108/113 (95%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GKMEL EWVDIVKTARFKELPP D DWYY RAAS+ARKIYLRQGIG+GGFQKIYGGRQRN Sbjct: 29 GKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRN 88 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 136 GSRPPHFCKSSGA+SRNILQ+LQKMGIIDVDPKGGRLITSQGRRDLDQVAG V Sbjct: 89 GSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRV 141
>RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2| Length = 143 Score = 176 bits (445), Expect = 4e-44 Identities = 81/116 (69%), Positives = 97/116 (83%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+EL W DIVKT R KEL P D DWYYIRAASMARKIYLR G+G+G F++IYGG +RN Sbjct: 27 GKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRN 86 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 127 GSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS G+RDLDQVAG + AE Sbjct: 87 GSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRIAAE 142
>RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3| Length = 143 Score = 175 bits (444), Expect = 5e-44 Identities = 81/115 (70%), Positives = 96/115 (83%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+EL W DIVKT + KEL P D DWYYIRAASMARK+YLR G+G+G F++IYGG +RN Sbjct: 27 GKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRN 86 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 130 GSRPPHFCKSSG V+R+ILQ+LQ M I+D+D KGGR ITS G+RDLDQVAG + A Sbjct: 87 GSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAA 141
>RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1| Length = 143 Score = 173 bits (439), Expect = 2e-43 Identities = 78/116 (67%), Positives = 96/116 (82%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+EL W DIVKT + KEL P D DWYYIRAASMARK+YLR G+G+G F++IYGG +RN Sbjct: 27 GKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRN 86 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 127 GSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS G+RDLDQVAG + E Sbjct: 87 GSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAVE 142
>RS19_MYAAR (Q94613) 40S ribosomal protein S19| Length = 149 Score = 148 bits (374), Expect = 6e-36 Identities = 64/113 (56%), Positives = 87/113 (76%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GKM++ EW D VKT FKEL P + DWY+IRAAS+ R +Y+R GIG F+KIYGGR+R Sbjct: 25 GKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRR 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 136 G+ P HFCK++G++SR +LQ L+ + I++ DP GGR +TSQGRRDLD++A + Sbjct: 85 GTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQI 137
>RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19| Length = 145 Score = 138 bits (347), Expect = 8e-33 Identities = 60/113 (53%), Positives = 84/113 (74%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK++ +WVD VK + KEL P D DWYYIR AS+AR +Y+R G+G+G KIYGGRQRN Sbjct: 26 GKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRN 85 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 136 G+RP H+ + S V+R +LQ L+ + +++ DP GGR +TS G+RD+D++AG V Sbjct: 86 GTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMDRIAGQV 138
>RS19_RAT (P17074) 40S ribosomal protein S19| Length = 144 Score = 136 bits (343), Expect = 2e-32 Identities = 63/115 (54%), Positives = 84/115 (73%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ EWVD VK A+ KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRN Sbjct: 25 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 130 G RP HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 85 GVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19| Length = 144 Score = 136 bits (343), Expect = 2e-32 Identities = 63/115 (54%), Positives = 84/115 (73%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ EWVD VK A+ KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRN Sbjct: 25 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 130 G RP HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 85 GVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_GILMI (Q9DFR5) 40S ribosomal protein S19| Length = 147 Score = 135 bits (341), Expect = 4e-32 Identities = 62/115 (53%), Positives = 84/115 (73%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ +WVD+VK R KEL P+D +W+YIRAAS R +YLR G G+G KIYGGRQRN Sbjct: 26 GKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQRN 85 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 130 G P H+ + S V+R +LQ L+ + +I+ DP GGR +T+QG RDLD++AG V A Sbjct: 86 GVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVSA 140
>RS19_PONPY (Q5R8M9) 40S ribosomal protein S19| Length = 144 Score = 134 bits (337), Expect = 1e-31 Identities = 62/115 (53%), Positives = 83/115 (72%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ EWVD VK A+ KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRN Sbjct: 25 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 130 G P HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 85 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_HUMAN (P39019) 40S ribosomal protein S19| Length = 144 Score = 134 bits (337), Expect = 1e-31 Identities = 62/115 (53%), Positives = 83/115 (72%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ EWVD VK A+ KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRN Sbjct: 25 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 130 G P HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 85 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19| Length = 147 Score = 134 bits (337), Expect = 1e-31 Identities = 62/115 (53%), Positives = 83/115 (72%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ +WVDIVK A+ KEL P D +W+YIRAAS R +YLR G+G+G KIYGGR+RN Sbjct: 28 GKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRKRN 87 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 130 G P HF S V+R +LQ L+ + +++ DP GGR +T QG RDLD++AG V A Sbjct: 88 GVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQGTRDLDRIAGQVAA 142
>RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19| Length = 147 Score = 134 bits (337), Expect = 1e-31 Identities = 62/113 (54%), Positives = 84/113 (74%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK++L EWVD+VKTA KEL P D DW+Y+RAAS AR +Y+R G+G+G KIYGGR+R Sbjct: 27 GKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRR 86 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 136 G++P F S VSR +LQ L+ + +++ D GGR +TSQG+RDLD++AG V Sbjct: 87 GTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQV 139
>RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19| Length = 144 Score = 132 bits (331), Expect = 6e-31 Identities = 56/113 (49%), Positives = 82/113 (72%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GKM++ EW I+K ++F EL P D DW+Y RAAS+ R +Y+R G+G KIYG R+RN Sbjct: 25 GKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRKRN 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 136 G+ P H+C+SSG+V+R +LQ L+ +++ D GGR +TSQG++DLD++A V Sbjct: 85 GTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQGQKDLDRIAAQV 137
>RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)| Length = 148 Score = 131 bits (330), Expect = 8e-31 Identities = 61/117 (52%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+ + WVD VKT+ ELPP DADWYY+RAA++AR IYLR+ +G+G +K++G + Sbjct: 26 GKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNR 85 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVD-PKGGRLITSQGRRDLDQVAGTVPAE 127 GSRP H +SGAV R +LQ L+K+G+++ D KGGR IT G+RDLD++A T E Sbjct: 86 GSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIAKTTVDE 142
>RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)| Length = 135 Score = 130 bits (328), Expect = 1e-30 Identities = 60/111 (54%), Positives = 80/111 (72%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ EWVD VK A KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRN Sbjct: 25 GKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAG 142 G P HF + S +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG Sbjct: 85 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 135
>RS19_PAGMA (P61155) 40S ribosomal protein S19| Length = 146 Score = 130 bits (326), Expect = 2e-30 Identities = 59/115 (51%), Positives = 82/115 (71%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ +WVD+VK + KEL P+D +W+YIR+AS R +YLR G G+G KIYG RQRN Sbjct: 26 GKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRN 85 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 130 G P H+ S V+R +LQ L+ + +I+ DP GGR +T+QG RDLD++AG V A Sbjct: 86 GVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVAA 140
>RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)| Length = 144 Score = 126 bits (317), Expect = 2e-29 Identities = 56/110 (50%), Positives = 77/110 (70%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GKM +W+DIVKT KEL P D DWYY+RAA++AR IYLR+ +G+G K+YGG Sbjct: 26 GKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNR 85 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 145 G RP H SG+V R ++Q L+K+G+++ GGR I+ QG+RDLD++A Sbjct: 86 GMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
>RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)| Length = 143 Score = 126 bits (317), Expect = 2e-29 Identities = 56/110 (50%), Positives = 77/110 (70%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GKM +W+DIVKT KEL P D DWYY+RAA++AR IYLR+ +G+G K+YGG Sbjct: 26 GKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNR 85 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 145 G RP H SG+V R ++Q L+K+G+++ GGR I+ QG+RDLD++A Sbjct: 86 GMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
>RS19A_DROME (P39018) 40S ribosomal protein S19a| Length = 155 Score = 122 bits (305), Expect = 6e-28 Identities = 53/113 (46%), Positives = 79/113 (69%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ + +DIVKTA+FKEL P D DW+Y+R AS+ R +Y R G+G KIYGGR+RN Sbjct: 25 GKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRN 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 136 G P HFC+++ +R LQ L+ +++ P GGR ++S G+RDLD++A + Sbjct: 85 GVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQI 137
>RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55)| Length = 143 Score = 121 bits (303), Expect = 1e-27 Identities = 55/111 (49%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDAD-WYYIRAASMARKIYLRQGIGIGGFQKIYGGRQR 298 GK+E+ +VDIVKT+ E+PP DA+ W+Y RAAS+AR IY+R+ +G+G K+YGG + Sbjct: 25 GKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKS 84 Query: 297 NGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 145 G RP +SG+++R +LQ L+K+GI+++ PKGGR I+ G+RDLD++A Sbjct: 85 RGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIA 135
>RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45)| Length = 143 Score = 121 bits (303), Expect = 1e-27 Identities = 55/111 (49%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDAD-WYYIRAASMARKIYLRQGIGIGGFQKIYGGRQR 298 GK+E+ +VDIVKT+ E+PP DA+ W+Y RAAS+AR IY+R+ +G+G K+YGG + Sbjct: 25 GKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKS 84 Query: 297 NGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 145 G RP +SG+++R +LQ L+K+GI+++ PKGGR I+ G+RDLD++A Sbjct: 85 RGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIA 135
>RS19S_ASCSU (P39698) 40S ribosomal protein S19S| Length = 150 Score = 119 bits (297), Expect = 5e-27 Identities = 52/111 (46%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ EW D+VK KEL P D+DWYY+R AS+AR++Y+R G+G +++YGG +R Sbjct: 27 GKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRR 86 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 145 G P HF ++SG+V R LQ L+ + ++ P G GR++T QGR+DLD++A Sbjct: 87 GVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDRIA 137
>RS19B_DROME (Q7KS38) 40S ribosomal protein S19b| Length = 154 Score = 112 bits (280), Expect = 5e-25 Identities = 52/116 (44%), Positives = 74/116 (63%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+ + E +KT +FKE PTD DW+Y R AS+ R +YLR G+G F K+Y GR+RN Sbjct: 25 GKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRN 84 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 127 G RP C+SS R LQ L+ +++ P GGR +T QG+R+LD++A + A+ Sbjct: 85 GVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKIVAK 140
>RS19_CAEEL (O18650) 40S ribosomal protein S19| Length = 146 Score = 110 bits (274), Expect = 2e-24 Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ EW D+VK KEL P D DW+Y RAAS+AR +Y R GIG F+K+YGG +R Sbjct: 27 GKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-GIGAFKKVYGGNKRR 85 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 145 G P HF S+G R +Q+L+K+ ++ P G GR+++ QGR+DLD++A Sbjct: 86 GVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIA 136
>RS19_ENTHI (O15631) 40S ribosomal protein S19| Length = 148 Score = 109 bits (273), Expect = 3e-24 Identities = 53/110 (48%), Positives = 74/110 (67%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+E+ EWVD VKT KEL P + DW YIRAA++ARK+YL GIG+ ++ YG + Sbjct: 27 GKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNK 86 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 145 P H SG V+R ILQ+L+KMGI+ + GR +T +GR+D+D++A Sbjct: 87 HYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTKEGRKDMDKIA 135
>RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated protein NO. 1)| Length = 148 Score = 109 bits (273), Expect = 3e-24 Identities = 50/111 (45%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Frame = -1 Query: 474 GKMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRN 295 GK+++ EW D+ K KEL P ++DWYY+R AS+AR++Y+R G+ + +YGG +R Sbjct: 27 GKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRR 86 Query: 294 GSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 145 G P HF K+SG+V R LQ L+ + + P G GR++T QGR+DLD++A Sbjct: 87 GVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIA 137
>RS19E_METJA (P54057) 30S ribosomal protein S19e| Length = 148 Score = 104 bits (259), Expect = 1e-22 Identities = 52/119 (43%), Positives = 75/119 (63%) Frame = -1 Query: 456 EWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPH 277 EWVD VKT +E P DW+YIR AS+ RKIY+ +G+ + YGGR+ G P H Sbjct: 29 EWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRKNRGHEPEH 88 Query: 276 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPSM 100 F K SG + R LQEL+K+G+++ P+ GR++T +GR LD +A V E + E+P++ Sbjct: 89 FYKGSGNIIRKALQELEKLGLVEKTPE-GRVVTPKGRSFLDNIAKEVRDEIIN-EIPAL 145
>RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e| Length = 153 Score = 102 bits (254), Expect = 5e-22 Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 1/110 (0%) Frame = -1 Query: 453 WVDIVKTARFKELPPTDADWYYIRAASMARKIYLR-QGIGIGGFQKIYGGRQRNGSRPPH 277 W KT KE PPTD DW+Y+RAAS+ RK+Y + IGI F+ IYGGRQ GS P H Sbjct: 32 WAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEH 91 Query: 276 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 127 F K+ G+V R ILQ+L++ G++ P GR I+ GR LD A + E Sbjct: 92 FRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREIMEE 141
>RS19E_ARCFU (O28210) 30S ribosomal protein S19e| Length = 147 Score = 100 bits (248), Expect = 2e-21 Identities = 50/120 (41%), Positives = 76/120 (63%) Frame = -1 Query: 456 EWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPH 277 EW VKT KE P DW+Y+R AS+ R++Y+ +GI + YGGR+R GS+PP Sbjct: 28 EWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPK 87 Query: 276 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPSMK 97 F K SGA+ RN L +L+++G + + GR++T GR LD+VA + +E S E+P+++ Sbjct: 88 FRKGSGAIVRNALHQLEQLGFVK-KTREGRVVTPMGRSFLDKVATELKSELVS-EIPALE 145
>RS19E_METTH (O27653) 30S ribosomal protein S19e| Length = 145 Score = 98.2 bits (243), Expect = 9e-21 Identities = 48/120 (40%), Positives = 76/120 (63%) Frame = -1 Query: 471 KMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNG 292 K++ EWV+ VKT KE P + DW+Y+RAA++ R++Y+ +G+ + YGG++ G Sbjct: 25 KVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRG 84 Query: 291 SRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVE 112 SRP F + SGA+ R LQ+L++ G+I + + GR+IT +GR LD+ A V E +E Sbjct: 85 SRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITPEGRSFLDKAAAEVKKEVEGLE 143
>RS19E_PYRHO (O59041) 30S ribosomal protein S19e| Length = 150 Score = 94.7 bits (234), Expect = 1e-19 Identities = 46/120 (38%), Positives = 69/120 (57%) Frame = -1 Query: 456 EWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPH 277 EW VKT R KE P DW+Y R AS+ R++Y+ +GI + YGGR+ G P Sbjct: 30 EWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPER 89 Query: 276 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPSMK 97 F K+ G++ R LQ+L+ G I+ P GR++T +GR LD++A + E + +P +K Sbjct: 90 FYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKIATELKKELEEI-IPELK 148
>RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e| Length = 150 Score = 78.6 bits (192), Expect = 8e-15 Identities = 41/109 (37%), Positives = 59/109 (54%) Frame = -1 Query: 471 KMELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNG 292 K++ WV VKT KE PP DW Y+RAASM RK+Y+ +GI YGG+ G Sbjct: 25 KIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRG 84 Query: 291 SRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 145 S+ H S +++R + EL+ G++ K GR ++ QG LD + Sbjct: 85 SKRYHAASGSRSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLLDNAS 132
>RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e| Length = 150 Score = 75.1 bits (183), Expect = 9e-14 Identities = 38/104 (36%), Positives = 57/104 (54%) Frame = -1 Query: 456 EWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPH 277 +W VKT +E P + DW Y+RAA+M RK+Y+ +GI YGG+ GS+ H Sbjct: 30 DWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISRMSSEYGGKVDRGSKRYH 89 Query: 276 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 145 + S ++ R + EL+K G + PK GR ++ QG LD + Sbjct: 90 AAQGSRSIIRYLFHELEKAGYVQKTPK-GRSLSPQGMSLLDNAS 132
>RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)| Length = 152 Score = 72.4 bits (176), Expect = 6e-13 Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 4/118 (3%) Frame = -1 Query: 468 MELXEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYG----GRQ 301 +E +W + KT +ELPP D++ RAAS+ RK+ + +G+ + YG G Sbjct: 25 IEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVDGPVGVNALRSEYGTSKQGTT 84 Query: 300 RNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 127 R RP K SG + R LQ+L+ G ++ GR +T GR LD AG + E Sbjct: 85 RYRVRPHQKTKGSGNIIRTALQQLEDAGYVETSENDGRRVTGDGRSLLDDTAGDLLTE 142
>LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late envelope protein| 1) Length = 110 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = +3 Query: 225 SATPEGCCGKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 374 S + GCCG C S GG S HHR H+ + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGGCSSGGGGCCLS--HHRRHRSHRHRLQSSGCCSQPS 92
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +2 Query: 74 PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPWEVMSLPPLGS 205 P+P + T+++ +SAG P++ S++P E + +PPLG+ Sbjct: 1652 PSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMPPLGN 1695
>STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)| Length = 129 Score = 30.8 bits (68), Expect = 1.9 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 9/61 (14%) Frame = +3 Query: 222 SSATPEG--C--CGKQHHC-----SCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 374 S++ P+G C C HC SC ++S GHH SSG HQSQ P +LP Sbjct: 17 SNSRPQGHTCSQCTCSSHCQTCSQSCSQSRSSSQSPTGHHSSSG-HQSQSP---HPTLPP 72 Query: 375 R 377 R Sbjct: 73 R 73
>TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 226 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -1 Query: 276 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 136 F + G N+ LQ G+I VD GG + + G +D+D++ V Sbjct: 175 FMLAGGLTPENVSDALQLHGVIGVDVSGG--VETNGMKDMDKITNFV 219
>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein| 3) Length = 118 Score = 30.4 bits (67), Expect = 2.4 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = +3 Query: 225 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 374 S + GCCG SC S G SS G HHR H + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100
>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein| 2) (Small proline-rich-like epidermal differentiation complex protein 2A) Length = 118 Score = 30.4 bits (67), Expect = 2.4 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = +3 Query: 225 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 374 S + GCCG SC S G SS G HHR H + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100
>LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late envelope protein| 6) Length = 118 Score = 30.0 bits (66), Expect = 3.2 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Frame = +3 Query: 225 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPSRQP* 386 S + GCCG C S GG SS G HHR H+ + +S S PS Sbjct: 45 SVSSGGCCGSSSGGCCSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCCSQPSAGSS 104 Query: 387 C 389 C Sbjct: 105 C 105
>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein| 5) Length = 118 Score = 29.3 bits (64), Expect = 5.4 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = +3 Query: 225 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 374 S + GCCG SC S G SS G HHR H+ + +S S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPS 100
>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 932 Score = 29.3 bits (64), Expect = 5.4 Identities = 20/42 (47%), Positives = 22/42 (52%) Frame = +3 Query: 294 RSSDGHHRSSGIHQSQFPASGRSSLPSRQP*CSTSQRQ*AAA 419 R SDG SS Q Q SLP R+P STSQ+ AAA Sbjct: 647 RQSDGTPYSSA--QPQRDTRSIGSLPEREPSASTSQKDLAAA 686
>DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 373 Score = 29.3 bits (64), Expect = 5.4 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = -1 Query: 318 IYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGT 139 +YGGR S C S+G++ RN+ E ++ I + P G ++T L G Sbjct: 16 VYGGRS---SEHAISCVSAGSILRNLDPERFEVVAIGITPDGSWVLTDGRPETLAITDGK 72 Query: 138 VPA 130 +PA Sbjct: 73 LPA 75
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 29.3 bits (64), Expect = 5.4 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +3 Query: 249 GKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGR--SSLPS 374 G + + S + GG R+ DG HRSS + + PA+ R SSL S Sbjct: 885 GGRRYLSRPARGGPCRARDGAHRSSALPSTSAPAAARRPSSLQS 928
>YDHC_BACSU (O05494) Hypothetical transcriptional regulator ydhC| Length = 224 Score = 29.3 bits (64), Expect = 5.4 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%) Frame = -1 Query: 318 IYGGRQRNGSR--PPHFCKSSGAVSRNILQE----LQKMGIIDVDPKGGRLITSQGRRDL 157 I+ G + G R KS G VSR+ ++E L+K G++ D + G ITS +D+ Sbjct: 24 IFNGTFKPGERINETQLAKSFG-VSRSPIREAMRLLEKDGLLKADDRNGFSITSLTAKDV 82 Query: 156 DQVAG-TVPAEF*SVEV 109 D++ +P E +VE+ Sbjct: 83 DEIYKIRIPLEQLAVEL 99
>PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63)| (Polyphosphate--glucose phosphotransferase) Length = 324 Score = 29.3 bits (64), Expect = 5.4 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +2 Query: 56 HNSKL*PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPW 175 HN KL PN H +DG +Q +A +V + S W Sbjct: 218 HNGKLIPNTEFGHLEVDGKEAEQRAASSVKDKYKWSYRTW 257
>S26A3_RAT (Q924C9) Chloride anion exchanger (DRA protein) (Down-regulated in| adenoma) (Solute carrier family 26 member 3) Length = 757 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = -1 Query: 240 LQELQKMGIIDVDPKGGRLITSQGRRDLDQ 151 +++LQK G+I V PK G + TS G +D D+ Sbjct: 571 IRKLQKQGLIQVTPK-GFICTSDGFKDSDE 599
>TRPF_YEAST (P00912) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 224 Score = 28.9 bits (63), Expect = 7.1 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 279 HFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 136 HF + G N+ L+ G+I VD GG + + G +D +++A V Sbjct: 174 HFMLAGGLTPENVGDALRLNGVIGVDVSGG--VETNGVKDSNKIANFV 219 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,254,170 Number of Sequences: 219361 Number of extensions: 1445166 Number of successful extensions: 4613 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4425 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4596 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
