ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16m15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_466018.1| Oryza sativa (japonica cultivar-group), mRNA 333 4e-88
2dbj|AK121782.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 4e-88
3gb|AY106720.1| Zea mays PCO113091 mRNA sequence 303 3e-79
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
6dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
7dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 163 8e-37
9emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 163 8e-37
10emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 163 8e-37
11ref|NM_101907.2| Arabidopsis thaliana transferase, transferring ... 46 0.13
12gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana... 46 0.13
13gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana... 46 0.13
14gb|AC013264.4| Homo sapiens BAC clone RP11-184N4 from 2, complet... 44 0.49
15gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 42 2.0
16gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome... 42 2.0
17gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.7
18gb|BT009330.1| Triticum aestivum clone wlm24.pk0026.a3:fis, full... 40 7.7
19emb|AL114785.1|CNS01BWP Botrytis cinerea strain T4 cDNA library 40 7.7
20emb|AL114137.1|CNS01BEP Botrytis cinerea strain T4 cDNA library 40 7.7
21gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, comple... 40 7.7
22dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
23dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.7

>ref|XM_466018.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3627

 Score =  333 bits (168), Expect = 4e-88
 Identities = 348/408 (85%)
 Strand = Plus / Minus

                                                                        
Query: 160  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 3351 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 3292

                                                                        
Query: 220  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatcctc 279
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||| |
Sbjct: 3291 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatccgc 3232

                                                                        
Query: 280  aagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatctcgcat 339
            | ||| || || ||||||||||| |||||||||||||| |||||||  ||||||||||||
Sbjct: 3231 aggagaaatacaacgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcat 3172

                                                                        
Query: 340  cttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattgtggaag 399
            |||||| | || | ||  || || || || || || ||||| || || |  |||||||||
Sbjct: 3171 cttgccttgacggctggagcagttccaccagtaccaagagtctgttctatgttgtggaag 3112

                                                                        
Query: 400  tctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaacttatcc 459
            || |  |||||||| || || ||||| ||||||||||| || || |||||||||||||| 
Sbjct: 3111 tcaagtgccaatccaagaatggtcttaactcgactggctatgagggcccacaacttatca 3052

                                                                        
Query: 460  gaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttccatgact 519
            ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||
Sbjct: 3051 gaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaacttccatgact 2992

                                                            
Query: 520  tcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
            ||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 2991 tcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 2944



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>dbj|AK121782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093P19, full
            insert sequence
          Length = 3628

 Score =  333 bits (168), Expect = 4e-88
 Identities = 348/408 (85%)
 Strand = Plus / Minus

                                                                        
Query: 160  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 3352 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 3293

                                                                        
Query: 220  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatcctc 279
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||| |
Sbjct: 3292 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatccgc 3233

                                                                        
Query: 280  aagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatctcgcat 339
            | ||| || || ||||||||||| |||||||||||||| |||||||  ||||||||||||
Sbjct: 3232 aggagaaatacaacgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcat 3173

                                                                        
Query: 340  cttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattgtggaag 399
            |||||| | || | ||  || || || || || || ||||| || || |  |||||||||
Sbjct: 3172 cttgccttgacggctggagcagttccaccagtaccaagagtctgttctatgttgtggaag 3113

                                                                        
Query: 400  tctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaacttatcc 459
            || |  |||||||| || || ||||| ||||||||||| || || |||||||||||||| 
Sbjct: 3112 tcaagtgccaatccaagaatggtcttaactcgactggctatgagggcccacaacttatca 3053

                                                                        
Query: 460  gaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttccatgact 519
            ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||
Sbjct: 3052 gaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaacttccatgact 2993

                                                            
Query: 520  tcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
            ||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 2992 tcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 2945



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>gb|AY106720.1| Zea mays PCO113091 mRNA sequence
          Length = 916

 Score =  303 bits (153), Expect = 3e-79
 Identities = 348/413 (84%)
 Strand = Plus / Minus

                                                                       
Query: 154 cgggacccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttg 213
           ||||||||||| || |||| |||||| ||  | ||||||||| ||||||||||||| |||
Sbjct: 708 cgggacccaggaatagcagagaagctcccactatcagacatgaaatagtgattgtaattg 649

                                                                       
Query: 214 atcctcgtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagatagg 273
           ||||| || || | ||| || |||||||| || || ||||| || |||||||||||||||
Sbjct: 648 atccttgtaactagatcggcaagatgggggaaatgacccacattgagcttgaaagatagg 589

                                                                       
Query: 274 atcctcaagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatc 333
           ||||||| ||| || | ||| ||||| || ||||||||||| ||||| || |  ||||||
Sbjct: 588 atcctcaggagaaatatgacacactcatcaaattgcttctcaatccggtcgatttccatc 529

                                                                       
Query: 334 tcgcatcttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattg 393
           ||||||| || ||| |||| ||  || ||||| ||||| | ||||||||| || ||||||
Sbjct: 528 tcgcatcgtgtcctcacagctgaagccgtcccaccggtactgagagtttgttctacattg 469

                                                                       
Query: 394 tggaagtctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaac 453
           |||||||| |  |||||||| || |||||||| ||||||||||| || || ||||||| |
Sbjct: 468 tggaagtccagtgccaatccaagaatagtcttaactcgactggcaatgagggcccacagc 409

                                                                       
Query: 454 ttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttcc 513
           ||||| |||||||||||||||||||  ||||||||||| ||||||||||| |||||||||
Sbjct: 408 ttatcagaggccacaaagcattgtcgttgaatagaagagagatatgcctcgtgaacttcc 349

                                                                
Query: 514 atgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtcca 566
           ||||||||||| | ||| |||||||  | ||||||||||||||||||||||||
Sbjct: 348 atgacttcatccagtgtggtagcagccgtcatgccatcacaaagctcagtcca 296



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Minus

                                                                            
Query: 450      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 509
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 25644451 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 25644392

                                                                          
Query: 510      ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
                ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 25644391 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 25644334



 Score =  113 bits (57), Expect = 6e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 160      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 25644945 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 25644886

                                                                         
Query: 220      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 276
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 25644885 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 25644829



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 292      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 345
                ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 25644706 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 25644653



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Plus

                                                                            
Query: 450      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 509
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 19111189 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 19111248

                                                                          
Query: 510      ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
                ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 19111249 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 19111306



 Score =  113 bits (57), Expect = 6e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                            
Query: 160      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 19110696 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 19110755

                                                                         
Query: 220      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 276
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 19110756 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 19110812



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 292      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 345
                ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 19110928 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 19110981



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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0415B12
          Length = 157419

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Plus

                                                                        
Query: 450  caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 509
            ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 9438 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 9497

                                                                      
Query: 510  ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
            ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 9498 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 9555



 Score =  113 bits (57), Expect = 6e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                        
Query: 160  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 8945 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 9004

                                                                     
Query: 220  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 276
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 9005 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 9061



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                  
Query: 292  acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 345
            ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 9177 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 9230



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>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Plus

                                                                          
Query: 450    caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 509
              ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 116710 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 116769

                                                                        
Query: 510    ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
              ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 116770 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 116827



 Score =  113 bits (57), Expect = 6e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                          
Query: 160    ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
              |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 116217 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 116276

                                                                       
Query: 220    gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 276
              || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 116277 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 116333



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                    
Query: 292    acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 345
              ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 116449 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 116502



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Minus

                                                                            
Query: 450      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 509
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 25572627 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 25572568

                                                                          
Query: 510      ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
                ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 25572567 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 25572510



 Score =  113 bits (57), Expect = 6e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 160      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 25573121 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 25573062

                                                                         
Query: 220      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 276
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 25573061 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 25573005



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 292      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 345
                ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 25572882 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 25572829



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>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167131

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Minus

                                                                         
Query: 450   caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 509
             ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 11689 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 11630

                                                                       
Query: 510   ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
             ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 11629 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 11572



 Score =  113 bits (57), Expect = 6e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                         
Query: 160   ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
             |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 12183 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 12124

                                                                      
Query: 220   gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 276
             || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 12123 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 12067



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 292   acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 345
             ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 11944 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 11891



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>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score =  163 bits (82), Expect = 8e-37
 Identities = 109/118 (92%)
 Strand = Plus / Plus

                                                                         
Query: 450   caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 509
             ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 29267 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 29326

                                                                       
Query: 510   ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccac 567
             ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 29327 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccac 29384



 Score =  113 bits (57), Expect = 6e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                         
Query: 160   ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 219
             |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 28773 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 28832

                                                                      
Query: 220   gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 276
             || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 28833 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 28889



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 292   acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 345
             ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 29012 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 29065



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>ref|NM_101907.2| Arabidopsis thaliana transferase, transferring glycosyl groups /
            tubulin binding AT1G20570 mRNA, complete cds
          Length = 2931

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 176  agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 235
            ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 2908 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 2849

                               
Query: 236  gatggggaaagtggcccac 254
            |||| || ||||| |||||
Sbjct: 2848 gatgagggaagtgtcccac 2830



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>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I,
             complete sequence
          Length = 143879

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                         
Query: 176   agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 235
             ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 12499 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 12558

                                
Query: 236   gatggggaaagtggcccac 254
             |||| || ||||| |||||
Sbjct: 12559 gatgagggaagtgtcccac 12577



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>gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I,
             complete sequence
          Length = 99231

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                         
Query: 176   agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 235
             ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 42616 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 42557

                                
Query: 236   gatggggaaagtggcccac 254
             |||| || ||||| |||||
Sbjct: 42556 gatgagggaagtgtcccac 42538



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>gb|AC013264.4| Homo sapiens BAC clone RP11-184N4 from 2, complete sequence
          Length = 149445

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ccacaaatggagctgaaaagca 122
             ||||||||||||||||||||||
Sbjct: 53521 ccacaaatggagctgaaaagca 53500



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>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 378   agtttgctccacattgtggaagtct 402
             |||||||||||| ||||||||||||
Sbjct: 56861 agtttgctccactttgtggaagtct 56837



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>gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome 18, complete sequence
          Length = 209529

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 515   tgacttcatctaatgtagtag 535
             |||||||||||||||||||||
Sbjct: 29390 tgacttcatctaatgtagtag 29410



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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 210     gttgatcctcgtgaccaaatccgc 233
               |||||||||||||| |||||||||
Sbjct: 2090024 gttgatcctcgtgatcaaatccgc 2090047



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>gb|BT009330.1| Triticum aestivum clone wlm24.pk0026.a3:fis, full insert mRNA
            sequence
          Length = 1958

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 524  ctaatgtagtagcagatgcc 543
            ||||||||||||||||||||
Sbjct: 1282 ctaatgtagtagcagatgcc 1263



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>emb|AL114785.1|CNS01BWP Botrytis cinerea strain T4 cDNA library
          Length = 840

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 ggatcctcaagaggaacacg 291
           ||||||||||||||||||||
Sbjct: 223 ggatcctcaagaggaacacg 204



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>emb|AL114137.1|CNS01BEP Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 ggatcctcaagaggaacacg 291
           ||||||||||||||||||||
Sbjct: 203 ggatcctcaagaggaacacg 184



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>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence
          Length = 200028

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 464    ccacaaagcattgtctctga 483
              ||||||||||||||||||||
Sbjct: 187344 ccacaaagcattgtctctga 187363



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>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1642C07
          Length = 206004

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   ctaatgtagtagcagatgcc 543
             ||||||||||||||||||||
Sbjct: 58887 ctaatgtagtagcagatgcc 58868



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>dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-807E13, complete
             sequence
          Length = 182382

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   tcaaggctgctgccgagcac 154
             ||||||||||||||||||||
Sbjct: 52440 tcaaggctgctgccgagcac 52421


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,780,937
Number of Sequences: 3902068
Number of extensions: 3780937
Number of successful extensions: 59169
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59063
Number of HSP's gapped (non-prelim): 106
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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