Clone Name	rbags17b13
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_507218.1| PREDICTED Oryza sativa (japonica cultivar-group...	567	e-158
2	ref|XM_482157.1| Oryza sativa (japonica cultivar-group), mRNA	567	e-158
3	dbj|AK119576.1| Oryza sativa (japonica cultivar-group) cDNA clon...	567	e-158
4	dbj|AK073889.1| Oryza sativa (japonica cultivar-group) cDNA clon...	567	e-158
5	gb|AY109156.1| Zea mays PCO079096 mRNA sequence	307	2e-80
6	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	182	9e-43
7	dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic D...	182	9e-43
8	emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, ...	64	6e-07
9	emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BA...	64	6e-07
10	ref|NM_118932.3| Arabidopsis thaliana binding / transporter AT4G...	62	2e-06
11	gb|AY125549.1| Arabidopsis thaliana AT4g27940/T13J8_50 mRNA, com...	62	2e-06
12	gb|AF428433.1|AF428433 Arabidopsis thaliana AT4g27940/T13J8_50 m...	62	2e-06
13	gb|AY085360.1| Arabidopsis thaliana clone 147875 mRNA, complete ...	62	2e-06
14	ref|NM_180120.1| Arabidopsis thaliana binding / transporter AT2G...	52	0.002
15	ref|NM_201969.1| Arabidopsis thaliana binding AT2G46320 transcri...	52	0.002
16	ref|NM_180121.1| Arabidopsis thaliana binding AT2G46320 transcri...	52	0.002
17	ref|NM_188535.1| Oryza sativa (japonica cultivar-group), predic...	52	0.002
18	gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C10 ma...	52	0.002
19	gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map...	52	0.002
20	gb|AY078922.1| Arabidopsis thaliana At2g46320/F11C10.1 mRNA, com...	52	0.002
21	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
22	emb|BX819432.1|CNS0A9ZO Arabidopsis thaliana Full-length cDNA Co...	52	0.002
23	emb|BX827732.1|CNS0A31N Arabidopsis thaliana Full-length cDNA Co...	52	0.002
24	dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
25	dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
26	dbj|AK117170.1| Arabidopsis thaliana At2g46320 mRNA for unknown ...	52	0.002
27	dbj|AK064461.1| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.002
28	emb|AJ966348.1| Hordeum vulgare subsp. vulgare mRNA for putative...	48	0.036
29	emb|AJ966347.1| Hordeum vulgare subsp. vulgare partial mRNA for ...	48	0.036
30	gb|AY950587.1| Solea solea clone Sos(AC)3 microsatellite sequence	46	0.14
31	emb|AL138810.10| Human DNA sequence from clone RP1-179L10 on chr...	44	0.56
32	emb|AJ298105.1|HSA298105 Homo sapiens PDX1 gene for lipoyl-conta...	44	0.56
33	ref|NM_007936.3| Mus musculus Eph receptor A4 (Epha4), mRNA	42	2.2
34	gb|BC052164.1| Mus musculus Eph receptor A4, mRNA (cDNA clone MG...	42	2.2
35	emb|X65138.1|MMSEK M.musculus mRNA for tyrosine kinase	42	2.2
36	gb|BC004782.1| Mus musculus Eph receptor A4, mRNA (cDNA clone MG...	42	2.2
37	gb|AC125478.14| Medicago truncatula clone mth2-31i19, complete s...	42	2.2
38	dbj|AK132203.1| Mus musculus 10 days embryo whole body cDNA, RIK...	42	2.2
39	dbj|AK147698.1| Mus musculus cDNA, RIKEN full-length enriched li...	42	2.2
40	gb|DP000004.1| Lemur catta target 1 genomic scaffold	42	2.2
41	gb|S57168.1| Sek=Eph-related receptor protein tyrosine kinase [m...	42	2.2
42	dbj|AK028509.1| Mus musculus 0 day neonate skin cDNA, RIKEN full...	42	2.2
43	gb|AC123542.4| Lemur catta clone LB2-136L13, complete sequence	42	2.2
44	emb|AL929555.20| Mouse DNA sequence from clone RP24-427F7 on chr...	42	2.2
45	gb|AC116730.7| Mus musculus chromosome 1, clone RP23-346J11, com...	42	2.2
46	emb|AL606982.21| Mouse DNA sequence from clone RP23-354C15 on ch...	42	2.2
47	gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome ...	40	8.7
48	ref|XM_447792.1| Candida glabrata CBS138, CAGL0J02002g partial mRNA	40	8.7
49	emb|AL158075.11| Human DNA sequence from clone RP11-348K2 on chr...	40	8.7
50	emb|AL109653.14|HSBG115M3 Human DNA sequence from clone GS1-115M...	40	8.7
51	emb|Z71255.1|SCCHRXVI S.cerevisiae chromosome XVI 165536 bp sequ...	40	8.7
52	emb|Z49274.1|SC9367 S.cerevisiae chromosome XVI cosmid 9367	40	8.7
53	emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp...	40	8.7
54	gb|AC091026.6| Homo sapiens chromosome 8, clone CTD-2584D11, com...	40	8.7
55	gb|BC090357.1| Xenopus tropicalis MGC108044 protein, mRNA (cDNA ...	40	8.7
56	emb|CR861110.1| Pongo pygmaeus mRNA; cDNA DKFZp459C0314 (from cl...	40	8.7
57	ref|NM_204781.1| Gallus gallus EPH receptor A4 (EPHA4), mRNA	40	8.7
58	tpg|BK003949.1|BK003948S2 TPA: TPA_inf: Macaca mulatta RTN4-Cw (...	40	8.7
59	tpg|BK001695.1| TPA: TPA_inf: Macaca fascicularis RTN4-C (RTN4) ...	40	8.7
60	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	40	8.7
61	dbj|AB169733.1| Macaca fascicularis brain cDNA, clone: QflA-1378...	40	8.7
62	gb|AC021355.8| Homo sapiens, clone RP11-24P4, complete sequence	40	8.7
63	ref|NM_001015852.1| Xenopus tropicalis MGC108044 protein (MGC108...	40	8.7
64	dbj|AB049853.1| Macaca fascicularis brain cDNA, clone:QnpA-18952...	40	8.7
65	ref|XM_244186.3| PREDICTED: Rattus norvegicus similar to Eph rec...	40	8.7
66	gb|AE014299.1| Shewanella oneidensis MR-1, complete genome	40	8.7
67	gb|DQ331982.1| Synthetic construct Saccharomyces cerevisiae clon...	40	8.7
68	gb|AC140318.4| Mus musculus BAC clone RP23-400F19 from 9, comple...	40	8.7
69	emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chr...	40	8.7
70	gb|AY894314.1| Harmothoe oculinarium cytochrome c oxidase subuni...	40	8.7
71	gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome...	40	8.7
72	dbj|D38174.1|CHKCEK8 Gallus gallus mRNA for Cek8, complete cds	40	8.7

---

>ref|XM_507218.1| PREDICTED Oryza sativa (japonica cultivar-group), P0434E03.16-1 mRNA
          Length = 1790

 Score =  567 bits (286), Expect = e-158
 Identities = 480/545 (88%)
 Strand = Plus / Minus

                                                                        
Query: 93   aaatcctggtcatgacatgttcctttggtgaagagcatacttgacgacctcgtaaaagga 152
            ||||| ||||||||| |||| |||||| |||||||||||||| || |||||||| || ||
Sbjct: 1396 aaatcttggtcatgatatgtgcctttgatgaagagcatacttcacaacctcgtagaaaga 1337

                                                                        
Query: 153  aatgacaataccaactgatggtccagcacgagcgacgcgtggaccaacaccagtgaacaa 212
            |||||| || ||||||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 1336 aatgacgattccaactgatgggccagctcgtgctacacgtggaccaacaccggtgaacaa 1277

                                                                        
Query: 213  accttttggaccttcagacctcaatatatcaactaatgtttgcctcgtggtcattctcat 272
             |||||   |||| |||| ||| | |||||| ||||||||||||| ||||||||||||||
Sbjct: 1276 gcctttcatacctccagagctccaaatatcagctaatgtttgccttgtggtcattctcat 1217

                                                                        
Query: 273  tgccttctgggcatccttctcaatctgtctccttgtcttggcaacatcaagagggcatgt 332
            |||||| || | ||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 1216 tgccttttgcgtatccttctctatttgtctccttgtcttagcaacatctagagggcatgt 1157

                                                                        
Query: 333  aacaccagcagcaagactacctgctacaaagccagcagcaaagttcgctcccaacacact 392
            | |||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||
Sbjct: 1156 agcaccagcagcaagactacctgctacaaagccagctgcaaagtttgcacccagcacact 1097

                                                                        
Query: 393  agctgcgtcaccttcctctgcaacaagaccaagcagctttcttcgaatcggctccagcgt 452
            |||||| |||||||| ||| | || | |||||||||||||||||||||||||||||| ||
Sbjct: 1096 agctgcatcaccttcttctccgacgataccaagcagctttcttcgaatcggctccagtgt 1037

                                                                        
Query: 453  tgaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtcca 512
            ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1036 tgaccagcatatagcagagaaaggaacatcccgagcaagttgtgcacccacacccgtcca 977

                                                                        
Query: 513  gagaacacgatagttttgcacattatgacttgaacttgcatgtggtgaaagaacaccaag 572
             ||| ||||||| |||||  |||| ||| |||| |||||| ||||||||| ||| |||||
Sbjct: 976  aagagcacgataattttgtgcattctgagttgagcttgcaagtggtgaaacaacgccaag 917

                                                                        
Query: 573  caatgttttccacattccagggggctttactccaggctgaaattccttatacgcctgcat 632
            ||||||||||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||
Sbjct: 916  caatgttttccacattccaggaggctttactccaggacgaaattctttatatgcctgcat 857

                 
Query: 633  ncgtg 637
             ||||
Sbjct: 856  ccgtg 852

---

>ref|XM_482157.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1734

 Score =  567 bits (286), Expect = e-158
 Identities = 480/545 (88%)
 Strand = Plus / Minus

                                                                        
Query: 93   aaatcctggtcatgacatgttcctttggtgaagagcatacttgacgacctcgtaaaagga 152
            ||||| ||||||||| |||| |||||| |||||||||||||| || |||||||| || ||
Sbjct: 1431 aaatcttggtcatgatatgtgcctttgatgaagagcatacttcacaacctcgtagaaaga 1372

                                                                        
Query: 153  aatgacaataccaactgatggtccagcacgagcgacgcgtggaccaacaccagtgaacaa 212
            |||||| || ||||||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 1371 aatgacgattccaactgatgggccagctcgtgctacacgtggaccaacaccggtgaacaa 1312

                                                                        
Query: 213  accttttggaccttcagacctcaatatatcaactaatgtttgcctcgtggtcattctcat 272
             |||||   |||| |||| ||| | |||||| ||||||||||||| ||||||||||||||
Sbjct: 1311 gcctttcatacctccagagctccaaatatcagctaatgtttgccttgtggtcattctcat 1252

                                                                        
Query: 273  tgccttctgggcatccttctcaatctgtctccttgtcttggcaacatcaagagggcatgt 332
            |||||| || | ||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 1251 tgccttttgcgtatccttctctatttgtctccttgtcttagcaacatctagagggcatgt 1192

                                                                        
Query: 333  aacaccagcagcaagactacctgctacaaagccagcagcaaagttcgctcccaacacact 392
            | |||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||
Sbjct: 1191 agcaccagcagcaagactacctgctacaaagccagctgcaaagtttgcacccagcacact 1132

                                                                        
Query: 393  agctgcgtcaccttcctctgcaacaagaccaagcagctttcttcgaatcggctccagcgt 452
            |||||| |||||||| ||| | || | |||||||||||||||||||||||||||||| ||
Sbjct: 1131 agctgcatcaccttcttctccgacgataccaagcagctttcttcgaatcggctccagtgt 1072

                                                                        
Query: 453  tgaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtcca 512
            ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1071 tgaccagcatatagcagagaaaggaacatcccgagcaagttgtgcacccacacccgtcca 1012

                                                                        
Query: 513  gagaacacgatagttttgcacattatgacttgaacttgcatgtggtgaaagaacaccaag 572
             ||| ||||||| |||||  |||| ||| |||| |||||| ||||||||| ||| |||||
Sbjct: 1011 aagagcacgataattttgtgcattctgagttgagcttgcaagtggtgaaacaacgccaag 952

                                                                        
Query: 573  caatgttttccacattccagggggctttactccaggctgaaattccttatacgcctgcat 632
            ||||||||||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||
Sbjct: 951  caatgttttccacattccaggaggctttactccaggacgaaattctttatatgcctgcat 892

                 
Query: 633  ncgtg 637
             ||||
Sbjct: 891  ccgtg 887

---

>dbj|AK119576.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B05, full
            insert sequence
          Length = 1734

 Score =  567 bits (286), Expect = e-158
 Identities = 480/545 (88%)
 Strand = Plus / Minus

                                                                        
Query: 93   aaatcctggtcatgacatgttcctttggtgaagagcatacttgacgacctcgtaaaagga 152
            ||||| ||||||||| |||| |||||| |||||||||||||| || |||||||| || ||
Sbjct: 1431 aaatcttggtcatgatatgtgcctttgatgaagagcatacttcacaacctcgtagaaaga 1372

                                                                        
Query: 153  aatgacaataccaactgatggtccagcacgagcgacgcgtggaccaacaccagtgaacaa 212
            |||||| || ||||||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 1371 aatgacgattccaactgatgggccagctcgtgctacacgtggaccaacaccggtgaacaa 1312

                                                                        
Query: 213  accttttggaccttcagacctcaatatatcaactaatgtttgcctcgtggtcattctcat 272
             |||||   |||| |||| ||| | |||||| ||||||||||||| ||||||||||||||
Sbjct: 1311 gcctttcatacctccagagctccaaatatcagctaatgtttgccttgtggtcattctcat 1252

                                                                        
Query: 273  tgccttctgggcatccttctcaatctgtctccttgtcttggcaacatcaagagggcatgt 332
            |||||| || | ||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 1251 tgccttttgcgtatccttctctatttgtctccttgtcttagcaacatctagagggcatgt 1192

                                                                        
Query: 333  aacaccagcagcaagactacctgctacaaagccagcagcaaagttcgctcccaacacact 392
            | |||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||
Sbjct: 1191 agcaccagcagcaagactacctgctacaaagccagctgcaaagtttgcacccagcacact 1132

                                                                        
Query: 393  agctgcgtcaccttcctctgcaacaagaccaagcagctttcttcgaatcggctccagcgt 452
            |||||| |||||||| ||| | || | |||||||||||||||||||||||||||||| ||
Sbjct: 1131 agctgcatcaccttcttctccgacgataccaagcagctttcttcgaatcggctccagtgt 1072

                                                                        
Query: 453  tgaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtcca 512
            ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1071 tgaccagcatatagcagagaaaggaacatcccgagcaagttgtgcacccacacccgtcca 1012

                                                                        
Query: 513  gagaacacgatagttttgcacattatgacttgaacttgcatgtggtgaaagaacaccaag 572
             ||| ||||||| |||||  |||| ||| |||| |||||| ||||||||| ||| |||||
Sbjct: 1011 aagagcacgataattttgtgcattctgagttgagcttgcaagtggtgaaacaacgccaag 952

                                                                        
Query: 573  caatgttttccacattccagggggctttactccaggctgaaattccttatacgcctgcat 632
            ||||||||||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||
Sbjct: 951  caatgttttccacattccaggaggctttactccaggacgaaattctttatatgcctgcat 892

                 
Query: 633  ncgtg 637
             ||||
Sbjct: 891  ccgtg 887

---

>dbj|AK073889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075G13, full
            insert sequence
          Length = 1790

 Score =  567 bits (286), Expect = e-158
 Identities = 480/545 (88%)
 Strand = Plus / Minus

                                                                        
Query: 93   aaatcctggtcatgacatgttcctttggtgaagagcatacttgacgacctcgtaaaagga 152
            ||||| ||||||||| |||| |||||| |||||||||||||| || |||||||| || ||
Sbjct: 1396 aaatcttggtcatgatatgtgcctttgatgaagagcatacttcacaacctcgtagaaaga 1337

                                                                        
Query: 153  aatgacaataccaactgatggtccagcacgagcgacgcgtggaccaacaccagtgaacaa 212
            |||||| || ||||||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 1336 aatgacgattccaactgatgggccagctcgtgctacacgtggaccaacaccggtgaacaa 1277

                                                                        
Query: 213  accttttggaccttcagacctcaatatatcaactaatgtttgcctcgtggtcattctcat 272
             |||||   |||| |||| ||| | |||||| ||||||||||||| ||||||||||||||
Sbjct: 1276 gcctttcatacctccagagctccaaatatcagctaatgtttgccttgtggtcattctcat 1217

                                                                        
Query: 273  tgccttctgggcatccttctcaatctgtctccttgtcttggcaacatcaagagggcatgt 332
            |||||| || | ||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 1216 tgccttttgcgtatccttctctatttgtctccttgtcttagcaacatctagagggcatgt 1157

                                                                        
Query: 333  aacaccagcagcaagactacctgctacaaagccagcagcaaagttcgctcccaacacact 392
            | |||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||
Sbjct: 1156 agcaccagcagcaagactacctgctacaaagccagctgcaaagtttgcacccagcacact 1097

                                                                        
Query: 393  agctgcgtcaccttcctctgcaacaagaccaagcagctttcttcgaatcggctccagcgt 452
            |||||| |||||||| ||| | || | |||||||||||||||||||||||||||||| ||
Sbjct: 1096 agctgcatcaccttcttctccgacgataccaagcagctttcttcgaatcggctccagtgt 1037

                                                                        
Query: 453  tgaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtcca 512
            ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1036 tgaccagcatatagcagagaaaggaacatcccgagcaagttgtgcacccacacccgtcca 977

                                                                        
Query: 513  gagaacacgatagttttgcacattatgacttgaacttgcatgtggtgaaagaacaccaag 572
             ||| ||||||| |||||  |||| ||| |||| |||||| ||||||||| ||| |||||
Sbjct: 976  aagagcacgataattttgtgcattctgagttgagcttgcaagtggtgaaacaacgccaag 917

                                                                        
Query: 573  caatgttttccacattccagggggctttactccaggctgaaattccttatacgcctgcat 632
            ||||||||||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||
Sbjct: 916  caatgttttccacattccaggaggctttactccaggacgaaattctttatatgcctgcat 857

                 
Query: 633  ncgtg 637
             ||||
Sbjct: 856  ccgtg 852

---

>gb|AY109156.1| Zea mays PCO079096 mRNA sequence
          Length = 582

 Score =  307 bits (155), Expect = 2e-80
 Identities = 330/387 (85%), Gaps = 1/387 (0%)
 Strand = Plus / Minus

                                                                       
Query: 246 taatgtttgcctcgtggtcattctcattgccttctgggcatccttctcaatctgtctcct 305
           |||||||||||| || ||||| |||||||||||||  | ||||||||| || ||||||||
Sbjct: 540 taatgtttgccttgtagtcatcctcattgccttctcagtatccttctctatttgtctcct 481

                                                                       
Query: 306 tgtcttggcaacatcaagagggcatgtaacaccagcagcaagactacctgctacaaagcc 365
           ||| || |||||||| |||||||||||| |||||||||||||||| | ||||||||| ||
Sbjct: 480 tgtttttgcaacatccagagggcatgtagcaccagcagcaagactgcatgctacaaaacc 421

                                                                       
Query: 366 agcagcaaagttcgctcccaacacactagctgcgtcaccttcctctgcaacaagaccaag 425
           ||||||||| ||| ||||||| |||||| |||| |  ||||| ||| |||||| ||||||
Sbjct: 420 agcagcaaaattcactcccaatacactacctgcattgccttcttctccaacaaaaccaag 361

                                                                       
Query: 426 cagctttcttcgaatcggctccagcgttgaccagcatatagcagagaatggaacatcccg 485
            || |||||| | || ||||| || ||||||||||||||||||||||| |||||||| ||
Sbjct: 360 tagttttctt-gcataggctcaagagttgaccagcatatagcagagaaaggaacatctcg 302

                                                                       
Query: 486 agcaagctgtgcccccacacccgtccagagaacacgatagttttgcacattatgacttga 545
           |||||| ||||| ||||| || ||||| |||||||| || ||||| ||||| ||||| ||
Sbjct: 301 agcaagttgtgcacccaccccagtccacagaacacggtaattttgtacattctgactcga 242

                                                                       
Query: 546 acttgcatgtggtgaaagaacaccaagcaatgttttccacattccagggggctttactcc 605
           ||||| | ||||||  |||||||||| ||| ||||||||||||||||| |||||||| ||
Sbjct: 241 acttggaagtggtgggagaacaccaaccaaggttttccacattccaggaggctttacgcc 182

                                      
Query: 606 aggctgaaattccttatacgcctgcat 632
           |||  |||| || ||||| ||||||||
Sbjct: 181 aggacgaaactctttatatgcctgcat 155

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  182 bits (92), Expect = 9e-43
 Identities = 131/144 (90%)
 Strand = Plus / Minus

                                                                            
Query: 298      tgtctccttgtcttggcaacatcaagagggcatgtaacaccagcagcaagactacctgct 357
                |||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 18248213 tgtctccttgtcttagcaacatctagagggcatgtagcaccagcagcaagactacctgct 18248154

                                                                            
Query: 358      acaaagccagcagcaaagttcgctcccaacacactagctgcgtcaccttcctctgcaaca 417
                ||||||||||| |||||||| || |||| |||||||||||| |||||||| ||| | || 
Sbjct: 18248153 acaaagccagctgcaaagtttgcacccagcacactagctgcatcaccttcttctccgacg 18248094

                                        
Query: 418      agaccaagcagctttcttcgaatc 441
                | ||||||||||||||||||||||
Sbjct: 18248093 ataccaagcagctttcttcgaatc 18248070



 Score =  123 bits (62), Expect = 8e-25
 Identities = 83/90 (92%)
 Strand = Plus / Minus

                                                                            
Query: 441      cggctccagcgttgaccagcatatagcagagaatggaacatcccgagcaagctgtgcccc 500
                ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 18247951 cggctccagtgttgaccagcatatagcagagaaaggaacatcccgagcaagttgtgcacc 18247892

                                              
Query: 501      cacacccgtccagagaacacgatagttttg 530
                |||||||||||| ||| ||||||| |||||
Sbjct: 18247891 cacacccgtccaaagagcacgataattttg 18247862



 Score =  115 bits (58), Expect = 2e-22
 Identities = 109/126 (86%)
 Strand = Plus / Minus

                                                                            
Query: 93       aaatcctggtcatgacatgttcctttggtgaagagcatacttgacgacctcgtaaaagga 152
                ||||| ||||||||| |||| |||||| |||||||||||||| || |||||||| || ||
Sbjct: 18249873 aaatcttggtcatgatatgtgcctttgatgaagagcatacttcacaacctcgtagaaaga 18249814

                                                                            
Query: 153      aatgacaataccaactgatggtccagcacgagcgacgcgtggaccaacaccagtgaacaa 212
                |||||| || ||||||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 18249813 aatgacgattccaactgatgggccagctcgtgctacacgtggaccaacaccggtgaacaa 18249754

                      
Query: 213      accttt 218
                 |||||
Sbjct: 18249753 gccttt 18249748



 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                            
Query: 533      cattatgacttgaacttgcatgtggtgaaagaacaccaagcaatgttttccacattccag 592
                |||| ||| |||| |||||| ||||||||| ||| |||||||||||||||||||||||||
Sbjct: 18247689 cattctgagttgagcttgcaagtggtgaaacaacgccaagcaatgttttccacattccag 18247630

                                                     
Query: 593      ggggctttactccaggctgaaattccttatacgcctg 629
                | ||||||||||||||  ||||||| ||||| |||||
Sbjct: 18247629 gaggctttactccaggacgaaattctttatatgcctg 18247593



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                       
Query: 238      atatcaactaatgtttgcctcgtggtcattctcattgccttctgggcatccttct 292
                |||||| ||||||||||||| |||||||||||||||||||| || | ||||||||
Sbjct: 18248459 atatcagctaatgtttgccttgtggtcattctcattgccttttgcgtatccttct 18248405

---

>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0434E03
          Length = 142414

 Score =  182 bits (92), Expect = 9e-43
 Identities = 131/144 (90%)
 Strand = Plus / Minus

                                                                         
Query: 298   tgtctccttgtcttggcaacatcaagagggcatgtaacaccagcagcaagactacctgct 357
             |||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 70525 tgtctccttgtcttagcaacatctagagggcatgtagcaccagcagcaagactacctgct 70466

                                                                         
Query: 358   acaaagccagcagcaaagttcgctcccaacacactagctgcgtcaccttcctctgcaaca 417
             ||||||||||| |||||||| || |||| |||||||||||| |||||||| ||| | || 
Sbjct: 70465 acaaagccagctgcaaagtttgcacccagcacactagctgcatcaccttcttctccgacg 70406

                                     
Query: 418   agaccaagcagctttcttcgaatc 441
             | ||||||||||||||||||||||
Sbjct: 70405 ataccaagcagctttcttcgaatc 70382



 Score =  123 bits (62), Expect = 8e-25
 Identities = 83/90 (92%)
 Strand = Plus / Minus

                                                                         
Query: 441   cggctccagcgttgaccagcatatagcagagaatggaacatcccgagcaagctgtgcccc 500
             ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 70263 cggctccagtgttgaccagcatatagcagagaaaggaacatcccgagcaagttgtgcacc 70204

                                           
Query: 501   cacacccgtccagagaacacgatagttttg 530
             |||||||||||| ||| ||||||| |||||
Sbjct: 70203 cacacccgtccaaagagcacgataattttg 70174



 Score =  115 bits (58), Expect = 2e-22
 Identities = 109/126 (86%)
 Strand = Plus / Minus

                                                                         
Query: 93    aaatcctggtcatgacatgttcctttggtgaagagcatacttgacgacctcgtaaaagga 152
             ||||| ||||||||| |||| |||||| |||||||||||||| || |||||||| || ||
Sbjct: 72185 aaatcttggtcatgatatgtgcctttgatgaagagcatacttcacaacctcgtagaaaga 72126

                                                                         
Query: 153   aatgacaataccaactgatggtccagcacgagcgacgcgtggaccaacaccagtgaacaa 212
             |||||| || ||||||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 72125 aatgacgattccaactgatgggccagctcgtgctacacgtggaccaacaccggtgaacaa 72066

                   
Query: 213   accttt 218
              |||||
Sbjct: 72065 gccttt 72060



 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                         
Query: 533   cattatgacttgaacttgcatgtggtgaaagaacaccaagcaatgttttccacattccag 592
             |||| ||| |||| |||||| ||||||||| ||| |||||||||||||||||||||||||
Sbjct: 70001 cattctgagttgagcttgcaagtggtgaaacaacgccaagcaatgttttccacattccag 69942

                                                  
Query: 593   ggggctttactccaggctgaaattccttatacgcctg 629
             | ||||||||||||||  ||||||| ||||| |||||
Sbjct: 69941 gaggctttactccaggacgaaattctttatatgcctg 69905



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 238   atatcaactaatgtttgcctcgtggtcattctcattgccttctgggcatccttct 292
             |||||| ||||||||||||| |||||||||||||||||||| || | ||||||||
Sbjct: 70771 atatcagctaatgtttgccttgtggtcattctcattgccttttgcgtatccttct 70717

---

>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68
          Length = 199749

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 454   gaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtccag 513
             |||||||| || || |||||||||||||| || ||||||||||| ||||  ||  |||||
Sbjct: 21886 gaccagcagattgctgagaatggaacatcacgggcaagctgtgcacccaagcctctccag 21827

                                 
Query: 514   agaacacgatagttttgcac 533
             ||| |||||||||| |||||
Sbjct: 21826 agaccacgatagttgtgcac 21807

---

>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project)
          Length = 83693

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 454   gaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtccag 513
             |||||||| || || |||||||||||||| || ||||||||||| ||||  ||  |||||
Sbjct: 16750 gaccagcagattgctgagaatggaacatcacgggcaagctgtgcacccaagcctctccag 16691

                                 
Query: 514   agaacacgatagttttgcac 533
             ||| |||||||||| |||||
Sbjct: 16690 agaccacgatagttgtgcac 16671

---

>ref|NM_118932.3| Arabidopsis thaliana binding / transporter AT4G27940 mRNA, complete
            cds
          Length = 1720

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                        
Query: 454  gaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtccag 513
            |||||||| || || |||||||||||||| || ||||||||||| ||||  ||  |||||
Sbjct: 1161 gaccagcagattgctgagaatggaacatcacgggcaagctgtgcacccaagcctctccag 1102

                               
Query: 514  agaacacgatagttttgca 532
            ||| |||||||||| ||||
Sbjct: 1101 agaccacgatagttgtgca 1083

---

>gb|AY125549.1| Arabidopsis thaliana AT4g27940/T13J8_50 mRNA, complete cds
          Length = 1242

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                       
Query: 454 gaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtccag 513
           |||||||| || || |||||||||||||| || ||||||||||| ||||  ||  |||||
Sbjct: 890 gaccagcagattgctgagaatggaacatcacgggcaagctgtgcacccaagcctctccag 831

                              
Query: 514 agaacacgatagttttgca 532
           ||| |||||||||| ||||
Sbjct: 830 agaccacgatagttgtgca 812

---

>gb|AF428433.1|AF428433 Arabidopsis thaliana AT4g27940/T13J8_50 mRNA, complete cds
          Length = 1591

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                        
Query: 454  gaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtccag 513
            |||||||| || || |||||||||||||| || ||||||||||| ||||  ||  |||||
Sbjct: 1063 gaccagcagattgctgagaatggaacatcacgggcaagctgtgcacccaagcctctccag 1004

                               
Query: 514  agaacacgatagttttgca 532
            ||| |||||||||| ||||
Sbjct: 1003 agaccacgatagttgtgca 985

---

>gb|AY085360.1| Arabidopsis thaliana clone 147875 mRNA, complete sequence
          Length = 1599

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                        
Query: 454  gaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtccag 513
            |||||||| || || |||||||||||||| || ||||||||||| ||||  ||  |||||
Sbjct: 1068 gaccagcagattgctgagaatggaacatcacgggcaagctgtgcacccaagcctctccag 1009

                               
Query: 514  agaacacgatagttttgca 532
            ||| |||||||||| ||||
Sbjct: 1008 agaccacgatagttgtgca 990

---

>ref|NM_180120.1| Arabidopsis thaliana binding / transporter AT2G46320 transcript
           variant AT2G46320.1 mRNA, complete cds
          Length = 1306

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 454 gaccagcatatagcagagaatggaacatcccgagcaag 491
           |||||||| || ||||||||||||||||||| ||||||
Sbjct: 744 gaccagcagattgcagagaatggaacatccctagcaag 707

---

>ref|NM_201969.1| Arabidopsis thaliana binding AT2G46320 transcript variant
           AT2G46320.3 mRNA, complete cds
          Length = 1710

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 454 gaccagcatatagcagagaatggaacatcccgagcaag 491
           |||||||| || ||||||||||||||||||| ||||||
Sbjct: 887 gaccagcagattgcagagaatggaacatccctagcaag 850

---

>ref|NM_180121.1| Arabidopsis thaliana binding AT2G46320 transcript variant
           AT2G46320.2 mRNA, complete cds
          Length = 1494

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 454 gaccagcatatagcagagaatggaacatcccgagcaag 491
           |||||||| || ||||||||||||||||||| ||||||
Sbjct: 932 gaccagcagattgcagagaatggaacatccctagcaag 895

---

>ref|NM_188535.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 879

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 565 acaccaagcaatgttttccacattccagggggctttactcca 606
           ||||||||||| || ||||||||||||||||| ||| |||||
Sbjct: 377 acaccaagcaaagtcttccacattccagggggttttcctcca 336



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 306 tgtcttggcaacatcaagagggcatgtaacaccagcag 343
           ||||||||||||||| ||||| || ||| |||||||||
Sbjct: 642 tgtcttggcaacatcgagaggacaggtagcaccagcag 605

---

>gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C10 map CIC02E07, complete
            sequence
          Length = 95214

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 454  gaccagcatatagcagagaatggaacatcccgagcaag 491
            |||||||| || ||||||||||||||||||| ||||||
Sbjct: 1075 gaccagcagattgcagagaatggaacatccctagcaag 1038

---

>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete
            sequence
          Length = 110149

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 454  gaccagcatatagcagagaatggaacatcccgagcaag 491
            |||||||| || ||||||||||||||||||| ||||||
Sbjct: 6199 gaccagcagattgcagagaatggaacatccctagcaag 6236

---

>gb|AY078922.1| Arabidopsis thaliana At2g46320/F11C10.1 mRNA, complete cds
          Length = 1124

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 454 gaccagcatatagcagagaatggaacatcccgagcaag 491
           |||||||| || ||||||||||||||||||| ||||||
Sbjct: 746 gaccagcagattgcagagaatggaacatccctagcaag 709

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 565     acaccaagcaatgttttccacattccagggggctttactcca 606
               ||||||||||| || ||||||||||||||||| ||| |||||
Sbjct: 6838369 acaccaagcaaagtcttccacattccagggggttttcctcca 6838328



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 306     tgtcttggcaacatcaagagggcatgtaacaccagcag 343
               ||||||||||||||| ||||| || ||| |||||||||
Sbjct: 6838959 tgtcttggcaacatcgagaggacaggtagcaccagcag 6838922

---

>emb|BX819432.1|CNS0A9ZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZC06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1492

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 454 gaccagcatatagcagagaatggaacatcccgagcaag 491
           |||||||| || ||||||||||||||||||| ||||||
Sbjct: 886 gaccagcagattgcagagaatggaacatccctagcaag 849

---

>emb|BX827732.1|CNS0A31N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH16ZB01 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1628

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 454  gaccagcatatagcagagaatggaacatcccgagcaagctgtgcccccacacccgtccag 513
            |||||||| || || |||||||||||||| || ||||||||| | ||||  ||  |||||
Sbjct: 1161 gaccagcagattgctgagaatggaacatcacgggcaagctgtacacccaagcctctccag 1102

                          
Query: 514  agaacacgatagtt 527
            ||| ||||||||||
Sbjct: 1101 agaccacgatagtt 1088

---

>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0492F05
          Length = 159242

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 565  acaccaagcaatgttttccacattccagggggctttactcca 606
            ||||||||||| || ||||||||||||||||| ||| |||||
Sbjct: 6093 acaccaagcaaagtcttccacattccagggggttttcctcca 6052



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 306  tgtcttggcaacatcaagagggcatgtaacaccagcag 343
            ||||||||||||||| ||||| || ||| |||||||||
Sbjct: 6683 tgtcttggcaacatcgagaggacaggtagcaccagcag 6646

---

>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0417G05
          Length = 147803

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                        
Query: 565    acaccaagcaatgttttccacattccagggggctttactcca 606
              ||||||||||| || ||||||||||||||||| ||| |||||
Sbjct: 120430 acaccaagcaaagtcttccacattccagggggttttcctcca 120389



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 306    tgtcttggcaacatcaagagggcatgtaacaccagcag 343
              ||||||||||||||| ||||| || ||| |||||||||
Sbjct: 121020 tgtcttggcaacatcgagaggacaggtagcaccagcag 120983

---

>dbj|AK117170.1| Arabidopsis thaliana At2g46320 mRNA for unknown protein, complete
           cds, clone: RAFL16-71-I10
          Length = 1494

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 454 gaccagcatatagcagagaatggaacatcccgagcaag 491
           |||||||| || ||||||||||||||||||| ||||||
Sbjct: 932 gaccagcagattgcagagaatggaacatccctagcaag 895

---

>dbj|AK064461.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-G05, full
           insert sequence
          Length = 1390

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 286 tccttctcaatctgtctccttgtcttggcaacatcaagagggcatgtaacaccagcag 343
           |||||||| || ||||| | ||||||||||||||| ||||| || ||| |||||||||
Sbjct: 913 tccttctctatttgtctgcgtgtcttggcaacatcgagaggacaggtagcaccagcag 856

---

>emb|AJ966348.1| Hordeum vulgare subsp. vulgare mRNA for putative mitochondrial
            carrier protein (mc1 gene)
          Length = 1532

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 285  atccttctcaatctgtctccttgtcttggcaacatcaagagggcatgt 332
            ||||||||| || ||||| | ||||||||||||||| ||||| |||||
Sbjct: 1032 atccttctctatttgtctgcgtgtcttggcaacatcgagaggacatgt 985

---

>emb|AJ966347.1| Hordeum vulgare subsp. vulgare partial mRNA for putative
           mitochondrial carrier protein (mc1 gene)
          Length = 1092

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 285 atccttctcaatctgtctccttgtcttggcaacatcaagagggcatgt 332
           ||||||||| || ||||| | ||||||||||||||| ||||| |||||
Sbjct: 909 atccttctctatttgtctgcgtgtcttggcaacatcgagaggacatgt 862

---

>gb|AY950587.1| Solea solea clone Sos(AC)3 microsatellite sequence
          Length = 350

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 292 tcaatctgtctccttgtcttggc 314
           |||||||||||||||||||||||
Sbjct: 341 tcaatctgtctccttgtcttggc 319

---

>emb|AL138810.10| Human DNA sequence from clone RP1-179L10 on chromosome 11p12-14.1
             Contains a gene encoding the dihydroxylipoamide
             dehydrogenase-binding protein of pyruvate dehydrogenase
             complex (E3-binding protein), a gene similar to the CGI-29
             protein, a CpG island, ESTs, STSs and GSSs, complete
             sequence
          Length = 128228

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 411   tgcaacaagaccaagcagctttcttc 436
             ||||||||| ||||||||||||||||
Sbjct: 13084 tgcaacaagtccaagcagctttcttc 13059

---

>emb|AJ298105.1|HSA298105 Homo sapiens PDX1 gene for lipoyl-containing component X, exons 1-11
          Length = 128228

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 411    tgcaacaagaccaagcagctttcttc 436
              ||||||||| ||||||||||||||||
Sbjct: 115145 tgcaacaagtccaagcagctttcttc 115170

---

>ref|NM_007936.3| Mus musculus Eph receptor A4 (Epha4), mRNA
          Length = 6328

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  cctcgtggtcattctcattgc 275
            |||||||||||||||||||||
Sbjct: 1731 cctcgtggtcattctcattgc 1751

---

>gb|BC052164.1| Mus musculus Eph receptor A4, mRNA (cDNA clone MGC:59362
            IMAGE:6512978), complete cds
          Length = 5567

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  cctcgtggtcattctcattgc 275
            |||||||||||||||||||||
Sbjct: 1703 cctcgtggtcattctcattgc 1723

---

>emb|X65138.1|MMSEK M.musculus mRNA for tyrosine kinase
          Length = 4242

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  cctcgtggtcattctcattgc 275
            |||||||||||||||||||||
Sbjct: 1731 cctcgtggtcattctcattgc 1751

---

>gb|BC004782.1| Mus musculus Eph receptor A4, mRNA (cDNA clone MGC:8084
            IMAGE:3588285), complete cds
          Length = 3544

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  cctcgtggtcattctcattgc 275
            |||||||||||||||||||||
Sbjct: 1646 cctcgtggtcattctcattgc 1666

---

>gb|AC125478.14| Medicago truncatula clone mth2-31i19, complete sequence
          Length = 111256

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   acatgttcctttggtgaagag 127
             |||||||||||||||||||||
Sbjct: 34032 acatgttcctttggtgaagag 34012

---

>dbj|AK132203.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:3425404B18 product:Eph receptor
            A4, full insert sequence
          Length = 3468

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  cctcgtggtcattctcattgc 275
            |||||||||||||||||||||
Sbjct: 1730 cctcgtggtcattctcattgc 1750

---

>dbj|AK147698.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1109J03 product:Eph receptor A4, full insert
            sequence
          Length = 6324

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  cctcgtggtcattctcattgc 275
            |||||||||||||||||||||
Sbjct: 1727 cctcgtggtcattctcattgc 1747

---

>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 405    ttcctctgcaacaagaccaagcagc 429
              |||||||||||||||| ||||||||
Sbjct: 754116 ttcctctgcaacaagaacaagcagc 754092

---

>gb|S57168.1| Sek=Eph-related receptor protein tyrosine kinase [mice, mRNA, 4242
            nt]
          Length = 4242

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  cctcgtggtcattctcattgc 275
            |||||||||||||||||||||
Sbjct: 1731 cctcgtggtcattctcattgc 1751

---

>dbj|AK028509.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
            library, clone:4632410M06 product:Eph receptor A4, full
            insert sequence
          Length = 4353

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  cctcgtggtcattctcattgc 275
            |||||||||||||||||||||
Sbjct: 1724 cctcgtggtcattctcattgc 1744

---

>gb|AC123542.4| Lemur catta clone LB2-136L13, complete sequence
          Length = 158703

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 405   ttcctctgcaacaagaccaagcagc 429
             |||||||||||||||| ||||||||
Sbjct: 97552 ttcctctgcaacaagaacaagcagc 97528

---

>emb|AL929555.20| Mouse DNA sequence from clone RP24-427F7 on chromosome 2, complete
             sequence
          Length = 155137

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 263   tcattctcattgccttctgggcatc 287
             |||||||||| ||||||||||||||
Sbjct: 87497 tcattctcatggccttctgggcatc 87473

---

>gb|AC116730.7| Mus musculus chromosome 1, clone RP23-346J11, complete sequence
          Length = 208503

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 255    cctcgtggtcattctcattgc 275
              |||||||||||||||||||||
Sbjct: 157637 cctcgtggtcattctcattgc 157657

---

>emb|AL606982.21| Mouse DNA sequence from clone RP23-354C15 on chromosome 4, complete
              sequence
          Length = 209339

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 197    caacaccagtgaacaaaccttttgg 221
              |||||||||||||||||| ||||||
Sbjct: 135852 caacaccagtgaacaaactttttgg 135876

---

>gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome 12, complete sequence
          Length = 186797

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   tctgcaacaagaccaagcag 428
             ||||||||||||||||||||
Sbjct: 84803 tctgcaacaagaccaagcag 84784

---

>ref|XM_447792.1| Candida glabrata CBS138, CAGL0J02002g partial mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 307 gtcttggcaacatcaagagg 326
           ||||||||||||||||||||
Sbjct: 281 gtcttggcaacatcaagagg 262

---

>emb|AL158075.11| Human DNA sequence from clone RP11-348K2 on chromosome 9q33.1-34.13
             Contains two novel genes and part of the NR6A1 gene for
             nuclear receptor (subfamily 6, group A) member 1, complete
             sequence
          Length = 102867

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aggaaatgacaataccaact 168
             ||||||||||||||||||||
Sbjct: 14119 aggaaatgacaataccaact 14138

---

>emb|AL109653.14|HSBG115M3 Human DNA sequence from clone GS1-115M3 on chromosome Xq27.1-28
             Contains gene KIAA1854 (containing FLJ38959) and a CpG
             island, complete sequence
          Length = 161341

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gtggttggttttatcttcta 88
             ||||||||||||||||||||
Sbjct: 90686 gtggttggttttatcttcta 90667

---

>emb|Z71255.1|SCCHRXVI S.cerevisiae chromosome XVI 165536 bp sequence, cen rightwards
          Length = 165536

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   atagcagagaatggaacatc 482
             ||||||||||||||||||||
Sbjct: 70885 atagcagagaatggaacatc 70904

---

>emb|Z49274.1|SC9367 S.cerevisiae chromosome XVI cosmid 9367
          Length = 42190

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 463 atagcagagaatggaacatc 482
           ||||||||||||||||||||
Sbjct: 730 atagcagagaatggaacatc 749

---

>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    gtcttggcaacatcaagagg 326
              ||||||||||||||||||||
Sbjct: 198506 gtcttggcaacatcaagagg 198487

---

>gb|AC091026.6| Homo sapiens chromosome 8, clone CTD-2584D11, complete sequence
          Length = 81523

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   ctcattgccttctgggcatc 287
             ||||||||||||||||||||
Sbjct: 73881 ctcattgccttctgggcatc 73900

---

>gb|BC090357.1| Xenopus tropicalis MGC108044 protein, mRNA (cDNA clone MGC:108044
           IMAGE:7002886), complete cds
          Length = 3560

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 411 tgcaacaagaccaagcagctttct 434
           |||||||||||||||| |||||||
Sbjct: 894 tgcaacaagaccaagctgctttct 871

---

>emb|CR861110.1| Pongo pygmaeus mRNA; cDNA DKFZp459C0314 (from clone DKFZp459C0314)
          Length = 1715

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  gcagcaagactacctgctacaaag 363
            ||||||||||||||||| ||||||
Sbjct: 1058 gcagcaagactacctgcaacaaag 1035

---

>ref|NM_204781.1| Gallus gallus EPH receptor A4 (EPHA4), mRNA
          Length = 3600

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  ctcgtggtcattctcattgc 275
            ||||||||||||||||||||
Sbjct: 1677 ctcgtggtcattctcattgc 1696

---

>tpg|BK003949.1|BK003948S2 TPA: TPA_inf: Macaca mulatta RTN4-Cw (RTN4) mRNA, 3' UTR
          Length = 725

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 340 gcagcaagactacctgctacaaag 363
           ||||||||||||||||| ||||||
Sbjct: 190 gcagcaagactacctgcaacaaag 167

---

>tpg|BK001695.1| TPA: TPA_inf: Macaca fascicularis RTN4-C (RTN4) mRNA, complete cds;
            alternatively spliced
          Length = 2162

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  gcagcaagactacctgctacaaag 363
            ||||||||||||||||| ||||||
Sbjct: 1469 gcagcaagactacctgcaacaaag 1446

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 546    acttgcatgtggtgaaagaa 565
              ||||||||||||||||||||
Sbjct: 122582 acttgcatgtggtgaaagaa 122601

---

>dbj|AB169733.1| Macaca fascicularis brain cDNA, clone: QflA-13788, similar to human
           reticulon 4 (RTN4), mRNA, RefSeq: NM_020532.3
          Length = 1648

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 340 gcagcaagactacctgctacaaag 363
           ||||||||||||||||| ||||||
Sbjct: 914 gcagcaagactacctgcaacaaag 891

---

>gb|AC021355.8| Homo sapiens, clone RP11-24P4, complete sequence
          Length = 154561

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   ctcattgccttctgggcatc 287
             ||||||||||||||||||||
Sbjct: 35799 ctcattgccttctgggcatc 35818

---

>ref|NM_001015852.1| Xenopus tropicalis MGC108044 protein (MGC108044), mRNA
          Length = 3560

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 411 tgcaacaagaccaagcagctttct 434
           |||||||||||||||| |||||||
Sbjct: 894 tgcaacaagaccaagctgctttct 871

---

>dbj|AB049853.1| Macaca fascicularis brain cDNA, clone:QnpA-18952, similar to human
            reticulon 4 (RTN4) isoform C, mRNA, NM_007008.1
          Length = 2162

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  gcagcaagactacctgctacaaag 363
            ||||||||||||||||| ||||||
Sbjct: 1469 gcagcaagactacctgcaacaaag 1446

---

>ref|XM_244186.3| PREDICTED: Rattus norvegicus similar to Eph receptor A4 (LOC316539),
            mRNA
          Length = 5496

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  ctcgtggtcattctcattgc 275
            ||||||||||||||||||||
Sbjct: 1732 ctcgtggtcattctcattgc 1751

---

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 3       aaaaagagcgcttgagtggc 22
               ||||||||||||||||||||
Sbjct: 3998091 aaaaagagcgcttgagtggc 3998110

---

>gb|DQ331982.1| Synthetic construct Saccharomyces cerevisiae clone FLH202941.01X AGC1
            gene, complete sequence
          Length = 2709

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 463  atagcagagaatggaacatc 482
            ||||||||||||||||||||
Sbjct: 2096 atagcagagaatggaacatc 2077

---

>gb|AC140318.4| Mus musculus BAC clone RP23-400F19 from 9, complete sequence
          Length = 180211

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 558    tgaaagaacaccaagcaatgtttt 581
              ||||||||||| ||||||||||||
Sbjct: 119618 tgaaagaacactaagcaatgtttt 119641

---

>emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chromosome 12, complete
              sequence
          Length = 208848

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    tctgcaacaagaccaagcag 428
              ||||||||||||||||||||
Sbjct: 153846 tctgcaacaagaccaagcag 153827

---

>gb|AY894314.1| Harmothoe oculinarium cytochrome c oxidase subunit I gene, partial
           cds; mitochondrial
          Length = 610

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 164 caactgatggtccagcacgagcga 187
           ||||||||||||||||| ||||||
Sbjct: 357 caactgatggtccagcatgagcga 334

---

>gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome 9, complete
            sequence
          Length = 254666

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 558  tgaaagaacaccaagcaatgtttt 581
            ||||||||||| ||||||||||||
Sbjct: 3698 tgaaagaacactaagcaatgtttt 3675

---

>dbj|D38174.1|CHKCEK8 Gallus gallus mRNA for Cek8, complete cds
          Length = 3600

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  ctcgtggtcattctcattgc 275
            ||||||||||||||||||||
Sbjct: 1677 ctcgtggtcattctcattgc 1696


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,668,700
Number of Sequences: 3902068
Number of extensions: 5668700
Number of successful extensions: 97842
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97638
Number of HSP's gapped (non-prelim): 203
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---