>RM12_CRICR (P52827) 39S ribosomal protein L12, mitochondrial precursor (L12mt)|
           (MRP-L12) (P2A1)
          Length = 203

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 39  IPVAVPSIVYEAPRLGRRTAKISASRQEEHGAXQARKL 152
           +P A  +    APRLG R A++  +RQ+  G   AR+L
Sbjct: 2   LPAAAAAASLWAPRLGLRGARLRLARQQVPGVCAARQL 39

>RBBP5_HUMAN (Q15291) Retinoblastoma-binding protein 5 (RBBP-5)|
           (Retinoblastoma-binding protein RBQ-3)
          Length = 538

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 86  KEDGKNLSQQAGRARSXSGQEASAP 160
           K DGK+  +QAGR +   G+E  +P
Sbjct: 474 KGDGKSKKKQAGRPKGSKGKEKDSP 498

>ALU4_HUMAN (P39191) Alu subfamily SB2 sequence contamination warning entry|
          Length = 603

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 149 LPGLX-CSVLFLPAG*DFCRPPSKPGSFIH 63
           LPG    S L LP+  D+ RPP +P +F++
Sbjct: 332 LPGFTPFSCLSLPSSWDYRRPPPRPANFLY 361


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,950,226
Number of Sequences: 219361
Number of extensions: 498934
Number of successful extensions: 1581
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1581
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)