| Clone Name | rbags16m04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosom... | 40 | 3.2 | 2 | dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP... | 40 | 3.2 | 3 | gb|AC155925.2| Mus musculus BAC clone RP24-248C21 from 9, comple... | 40 | 3.2 |
|---|
>gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosome 16, complete sequence Length = 203553 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 tgcagcaagagaacacacataact 52 ||||||||||||| |||||||||| Sbjct: 170256 tgcagcaagagaagacacataact 170233
>dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP21-668B6, complete sequence Length = 214865 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 tgcagcaagagaacacacataact 52 ||||||||||||| |||||||||| Sbjct: 55446 tgcagcaagagaagacacataact 55469
>gb|AC155925.2| Mus musculus BAC clone RP24-248C21 from 9, complete sequence Length = 171521 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aataagctgtcactagtcta 95 |||||||||||||||||||| Sbjct: 40866 aataagctgtcactagtcta 40847 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,287,537 Number of Sequences: 3902068 Number of extensions: 1287537 Number of successful extensions: 18954 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 18947 Number of HSP's gapped (non-prelim): 7 length of query: 249 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 227 effective length of database: 17,147,199,772 effective search space: 3892414348244 effective search space used: 3892414348244 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)