ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags16l23 |
|---|---|
| Clone Library Name | barley_pub |
>LGUL_ORYSA (Q948T6) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) Length = 291 Score = 155 bits (393), Expect = 2e-38 Identities = 76/82 (92%), Positives = 78/82 (95%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYNYGVTEY KGNAYAQ AIGT++VYKSAEAVELVTKELGGKILRQPGPLPGLNTKI Sbjct: 209 ELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIA 268 Query: 158 SFLDPDGWKVVLVDYADFLKEL 93 SFLDPDGWKVVLVD ADFLKEL Sbjct: 269 SFLDPDGWKVVLVDNADFLKEL 290 Score = 59.7 bits (143), Expect = 2e-09 Identities = 32/73 (43%), Positives = 43/73 (58%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYNYGV +Y G + AI T++VYK AE ++ KI R+PGP+ G +T I Sbjct: 78 ELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIK---SSCCCKITREPGPVKGGSTVIA 134 Query: 158 SFLDPDGWKVVLV 120 DPDG+ L+ Sbjct: 135 FAQDPDGYMFELI 147
>LGUL_BRAOG (Q39366) Putative lactoylglutathione lyase (EC 4.4.1.5)| (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 282 Score = 137 bits (345), Expect = 7e-33 Identities = 66/82 (80%), Positives = 71/82 (86%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYNYGVTEY KGNAYAQ AIGTD+VYKSAE V++V +ELGGKI R+ GPLPGL TKI Sbjct: 200 ELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIV 259 Query: 158 SFLDPDGWKVVLVDYADFLKEL 93 SFLDPDGWK VLVD DFLKEL Sbjct: 260 SFLDPDGWKQVLVDNEDFLKEL 281 Score = 60.1 bits (144), Expect = 1e-09 Identities = 31/73 (42%), Positives = 41/73 (56%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYNYGV+ Y G + AI T +V K EAV + GG + R+PGP+ G + I Sbjct: 71 ELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAV----RAKGGNVTREPGPVKGGGSVIA 126 Query: 158 SFLDPDGWKVVLV 120 DPDG+ L+ Sbjct: 127 FVKDPDGYTFELI 139
>LGUL_VIBCH (Q9KT93) Probable lactoylglutathione lyase (EC 4.4.1.5)| (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 184 Score = 72.0 bits (175), Expect = 3e-13 Identities = 33/73 (45%), Positives = 46/73 (63%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYN+GV +Y KGNAY AIG D++Y + + + K GG + R+PGP+ G T I Sbjct: 105 ELTYNWGVADYEKGNAYGHIAIGVDDIYATCDTI----KAAGGIVTREPGPVKGGTTHIA 160 Query: 158 SFLDPDGWKVVLV 120 DPDG+ + L+ Sbjct: 161 FVKDPDGYMIELI 173
>LGUL_HAEIN (P44638) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 67.4 bits (163), Expect = 8e-12 Identities = 32/74 (43%), Positives = 46/74 (62%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYN+GV +Y G AY AIG D++Y + EAV + GG + R+ GP+ G +T I Sbjct: 56 ELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAV----RASGGNVTREAGPVKGGSTVIA 111 Query: 158 SFLDPDGWKVVLVD 117 DPDG+K+ ++ Sbjct: 112 FVEDPDGYKIEFIE 125
>LGUL_VIBPA (P46235) Probable lactoylglutathione lyase (EC 4.4.1.5)| (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 138 Score = 65.9 bits (159), Expect = 2e-11 Identities = 31/73 (42%), Positives = 44/73 (60%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYN+G TEY G A+ AIG D++Y + +A+ K GG + R+ GP+ G T I Sbjct: 59 ELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAI----KAAGGNVTREAGPVKGGTTHIA 114 Query: 158 SFLDPDGWKVVLV 120 DPDG+ + L+ Sbjct: 115 FVKDPDGYMIELI 127
>LGUL_SALTY (P0A1Q2) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 65.5 bits (158), Expect = 3e-11 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYN+GV Y GNAY A+ DN +AEA E + ++ GG + R+ GP+ G +T I Sbjct: 56 ELTYNWGVESYDMGNAYGHIALSVDN---AAEACERI-RQNGGNVTREAGPVKGGSTIIA 111 Query: 158 SFLDPDGWKVVLVDYAD 108 DPDG+K+ L++ D Sbjct: 112 FVEDPDGYKIELIEAKD 128
>LGUL_SALTI (P0A1Q3) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 65.5 bits (158), Expect = 3e-11 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYN+GV Y GNAY A+ DN +AEA E + ++ GG + R+ GP+ G +T I Sbjct: 56 ELTYNWGVESYDMGNAYGHIALSVDN---AAEACERI-RQNGGNVTREAGPVKGGSTIIA 111 Query: 158 SFLDPDGWKVVLVDYAD 108 DPDG+K+ L++ D Sbjct: 112 FVEDPDGYKIELIEAKD 128
>LGUL_SHIFL (P0AC83) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 63.2 bits (152), Expect = 2e-10 Identities = 33/77 (42%), Positives = 47/77 (61%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYN+GV +Y G AY A+ DN +AEA E + ++ GG + R+ GP+ G T I Sbjct: 56 ELTYNWGVDKYELGTAYGHIALSVDN---AAEACEKI-RQNGGNVTREAGPVKGGTTVIA 111 Query: 158 SFLDPDGWKVVLVDYAD 108 DPDG+K+ L++ D Sbjct: 112 FVEDPDGYKIELIEEKD 128
>LGUL_ECOLI (P0AC81) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 63.2 bits (152), Expect = 2e-10 Identities = 33/77 (42%), Positives = 47/77 (61%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYN+GV +Y G AY A+ DN +AEA E + ++ GG + R+ GP+ G T I Sbjct: 56 ELTYNWGVDKYELGTAYGHIALSVDN---AAEACEKI-RQNGGNVTREAGPVKGGTTVIA 111 Query: 158 SFLDPDGWKVVLVDYAD 108 DPDG+K+ L++ D Sbjct: 112 FVEDPDGYKIELIEEKD 128
>LGUL_ECO57 (P0AC82) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 135 Score = 63.2 bits (152), Expect = 2e-10 Identities = 33/77 (42%), Positives = 47/77 (61%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELTYN+GV +Y G AY A+ DN +AEA E + ++ GG + R+ GP+ G T I Sbjct: 56 ELTYNWGVDKYELGTAYGHIALSVDN---AAEACEKI-RQNGGNVTREAGPVKGGTTVIA 111 Query: 158 SFLDPDGWKVVLVDYAD 108 DPDG+K+ L++ D Sbjct: 112 FVEDPDGYKIELIEEKD 128
>LGUL_SYNY3 (Q55595) Probable lactoylglutathione lyase (EC 4.4.1.5)| (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 131 Score = 62.0 bits (149), Expect = 4e-10 Identities = 26/73 (35%), Positives = 46/73 (63%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELT+N+G +Y GN + A+G +++Y + + + ++ GGK++R+PGP+ T I Sbjct: 56 ELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKI----RDKGGKVVREPGPMKHGTTVIA 111 Query: 158 SFLDPDGWKVVLV 120 DPDG+K+ L+ Sbjct: 112 FVEDPDGYKIELI 124
>LGUL_NEIMB (P0A0T3) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 138 Score = 55.5 bits (132), Expect = 3e-08 Identities = 27/73 (36%), Positives = 40/73 (54%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELT+N+ Y GNAY A+ D+ Y++ E V K GG ++R+ GP+ T I Sbjct: 56 ELTHNWDTERYDLGNAYGHIAVEVDDAYEACERV----KRQGGNVVREAGPMKHGTTVIA 111 Query: 158 SFLDPDGWKVVLV 120 DPDG+K+ + Sbjct: 112 FVEDPDGYKIEFI 124
>LGUL_NEIMA (P0A0T2) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 138 Score = 55.5 bits (132), Expect = 3e-08 Identities = 27/73 (36%), Positives = 40/73 (54%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 ELT+N+ Y GNAY A+ D+ Y++ E V K GG ++R+ GP+ T I Sbjct: 56 ELTHNWDTERYDLGNAYGHIAVEVDDAYEACERV----KRQGGNVVREAGPMKHGTTVIA 111 Query: 158 SFLDPDGWKVVLV 120 DPDG+K+ + Sbjct: 112 FVEDPDGYKIEFI 124
>YQ5A_CAEEL (Q09253) Hypothetical protein C16C10.10| Length = 281 Score = 32.7 bits (73), Expect = 0.23 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = -3 Query: 338 ELTYNYGVTEYXKGNAYAQXAIGTDNVYKSAEAVELVTKELGGKILRQP 192 E+TYNY + +Y GN Y I +D +++ E + G ++ P Sbjct: 69 EITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHRKSGCGRLAVKDP 117
>RDRP_DHVI1 (P27153) RNA-directed RNA polymerase catalytic subunit (EC| 2.7.7.48) (RNA-directed RNA polymerase subunit P2) Length = 716 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%) Frame = -3 Query: 191 GPLPGLNTKITSFLDPDG----WKVVLVDYADFLKEL 93 G L G K LDPD W V L DY ++KEL Sbjct: 297 GELSGDQEKFNECLDPDAMRLMWTVFLEDYPQWVKEL 333
>PPCK_ANASU (O09460) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 532 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = -1 Query: 190 GHYRG*TPKSPLSLTQMAGKWFWWTT---QTSSRSCTEDEQAQM 68 G Y G +PK + A K WWT+ + ++ TE+ AQ+ Sbjct: 55 GVYTGRSPKDKFIVKNEASKEIWWTSDEFKNDNKPVTEEAWAQL 98
>Y3106_PSEAE (Q51576) Putative oxidoreductase PA3106 (EC 1.-.-.-)| Length = 255 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -3 Query: 212 GKILRQPGPLPGLNTKITSFLDPDGWKVVLVD 117 GK+ G G+ I+++L +GW+VVL D Sbjct: 10 GKVALVTGAARGIGLGISAWLIAEGWQVVLAD 41
>YIDF_ECOLI (P31443) Hypothetical protein yidF| Length = 165 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%) Frame = -2 Query: 330 IQLWCHGIX-QGQCICSGCYWH*QCVQERRSS-----*AGYQ 223 +Q WC Q +C C C WH C R+ + AGYQ Sbjct: 93 LQKWCGSENPQPRCDCQACDWHRLCPHARQETPDSVLCAGYQ 134
>MMPL4_MYCTU (O53735) Putative membrane protein mmpL4| Length = 967 Score = 27.7 bits (60), Expect = 7.4 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 154 SLTQMAGKWFWWTTQTSSR 98 S+ + G+WFWW + SR Sbjct: 923 SIAALLGRWFWWPLRVRSR 941
>MMPL9_MYCTU (P95235) Putative membrane protein mmpL9| Length = 962 Score = 27.3 bits (59), Expect = 9.7 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -1 Query: 154 SLTQMAGKWFWWTTQTSSR 98 S+ + G+WFWW SR Sbjct: 922 SIAALLGRWFWWPNMIHSR 940
>MMPL4_MYCLE (P54881) Putative membrane protein mmpL4| Length = 959 Score = 27.3 bits (59), Expect = 9.7 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 154 SLTQMAGKWFWWTTQTSSR 98 S+ + G+WFWW Q +R Sbjct: 920 SIAALLGRWFWWPQQGRTR 938
>VGLB_SHV1 (Q04464) Glycoprotein B precursor| Length = 920 Score = 27.3 bits (59), Expect = 9.7 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%) Frame = -3 Query: 293 AYAQXAIGTDNVY-----KSAEAVELVTKELGGKILRQPGPLPGLNTKIT 159 A+A+ A G VY +S+E++ EL G+ PGP PGL + T Sbjct: 35 AFAEAARGVTPVYSDDADESSESIITGGAELPGEDAGPPGPEPGLPDRPT 84
>T1SA_ECOLI (P19704) Type I restriction enzyme EcoAI specificity protein (S| protein) (S.EcoAI) Length = 589 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = -3 Query: 251 SAEAVELVTKELGGKILRQPGPLPGLNTKITSFLDPDGWK 132 +AE ELV + GKI +Q PLP ++ + F PDGW+ Sbjct: 71 AAEKAELVKQ---GKIKKQK-PLPEISEEEKPFELPDGWE 106
>LCMT2_ASPFU (Q4WVD1) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)| Length = 1047 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -3 Query: 272 GTDNVYKSAEAVELVTKELGGKILRQPGPLP-GLNTKITSFLDPDGWKVVLVD 117 G + +K +A+ LVT+ LR GP+ L+ ++S +GWK+ + D Sbjct: 839 GLKDDFKLPQALSLVTENAHSSPLRISGPVTMWLHYDVSSNTKQEGWKLRVAD 891
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -3 Query: 254 KSAEAVELVTKELGGKILRQPGPLPGLNTKITSFLDPDGW 135 K +A +L+ K +G I + LPG KIT D DG+ Sbjct: 22 KGEDAEKLIGKRIGDVIDGEIVGLPGYKLKITGGTDKDGF 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,022,289 Number of Sequences: 219361 Number of extensions: 925065 Number of successful extensions: 2173 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2159 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
