ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17a21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467785.1| Oryza sativa (japonica cultivar-group), mRNA 337 3e-89
2dbj|AK108482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 3e-89
3gb|AY110077.1| Zea mays CL20590_1 mRNA sequence 232 1e-57
4dbj|AK102752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
5dbj|AK061806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
7dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
8dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
9gb|BT017605.1| Zea mays clone EL01N0432C07.c mRNA sequence 165 2e-37
10gb|AY106282.1| Zea mays PCO142333 mRNA sequence 165 2e-37
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
12dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
13dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
14gb|AY107684.1| Zea mays PCO095447 mRNA sequence 88 4e-14
15gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 64 6e-07
16gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 64 6e-07
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
18dbj|AK103473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 64 6e-07
20ref|NM_191863.1| Oryza sativa (japonica cultivar-group), predic... 50 0.010
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
22dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
23dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
24emb|AL442223.13| Human DNA sequence from clone RP11-426P2 on chr... 44 0.59
25gb|AC016205.7| Homo sapiens, clone RP11-25C13, complete sequence 44 0.59
26gb|AC115714.14| Mus musculus chromosome 12, clone RP23-477C24, c... 42 2.3
27gb|BC103504.1| Homo sapiens cDNA clone IMAGE:40001827, with appa... 42 2.3
28gb|AC022023.7| Homo sapiens chromosome 10 clone RP11-411P18, com... 42 2.3
29gb|AC108035.3| Homo sapiens BAC clone RP11-140P5 from 4, complet... 42 2.3
30dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.3
31emb|AL355543.13| Human DNA sequence from clone RP11-86E10 on chr... 42 2.3
32gb|AC145914.4| Gallus gallus BAC clone CH261-78G10 from chromoso... 42 2.3
33gb|AC163609.4| Mus musculus chromosome 1, clone RP24-128P11, com... 42 2.3
34gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, comp... 40 9.2
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.2
36emb|BX470177.14| Zebrafish DNA sequence from clone DKEY-31F3 in ... 40 9.2
37emb|BX908785.10| Zebrafish DNA sequence from clone DKEYP-51A2 in... 40 9.2
38emb|BX649247.9| Zebrafish DNA sequence from clone DKEY-181C10 in... 40 9.2
39gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome... 40 9.2
40gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome... 40 9.2
41gb|AC124525.3| Mus musculus BAC clone RP23-406I17 from chromosom... 40 9.2
42ref|XM_648522.1| Entamoeba histolytica HM-1:IMSS deoxyhypusine s... 40 9.2
43gb|AY935269.1| Antirrhinum majus plena (PLE) gene, complete sequ... 40 9.2
44gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 9.2
45gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, com... 40 9.2
46emb|AL590105.19| Human DNA sequence from clone RP11-273H7 on chr... 40 9.2
47emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11... 40 9.2
48gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, comp... 40 9.2
49gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, co... 40 9.2
50gb|BC050097.1| Homo sapiens leucine rich repeat containing 27, m... 40 9.2
51emb|AL596182.28| Mouse DNA sequence from clone RP23-303F24 on ch... 40 9.2
52emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in ... 40 9.2
53gb|AC117372.2| Homo sapiens 12 BAC RP11-266O15 (Roswell Park Can... 40 9.2
54gb|AC106033.4| Homo sapiens chromosome 18, clone CTD-2025K11, co... 40 9.2
55gb|AC104580.5| Homo sapiens chromosome 8, clone RP11-1084G15, co... 40 9.2
56gb|AC022828.10| Homo sapiens chromosome 8, clone RP11-119K24, co... 40 9.2
57dbj|AK080949.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 9.2
58dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
59dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
60gb|AC046130.25| Homo sapiens 12 BAC RP11-847H18 (Roswell Park Ca... 40 9.2
61gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094... 40 9.2
62dbj|AK098652.1| Homo sapiens cDNA FLJ25786 fis, clone TST06852 40 9.2
63gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete... 40 9.2
64dbj|AP003729.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.2
65gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete seq... 40 9.2
66gb|AC005968.1|AC005968 Homo sapiens chromosome 18, clone hRPK.24... 40 9.2
67emb|CR376732.12| Zebrafish DNA sequence from clone DKEY-146H23 i... 40 9.2
68gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.2
69gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
70emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, c... 40 9.2
71emb|AL844569.4| Mouse DNA sequence from clone RP23-230H3 on chro... 40 9.2
72emb|AL352955.7|CNS05TBU Human chromosome 14 DNA sequence BAC R-1... 40 9.2
73emb|AL096806.1|CNS00YVC Homo sapiens genomic region containing h... 40 9.2
74emb|AL672035.7| Mouse DNA sequence from clone RP23-314N8 on chro... 40 9.2
75dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.2 
>ref|XM_467785.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 932

 Score =  337 bits (170), Expect = 3e-89
 Identities = 365/430 (84%)
 Strand = Plus / Minus

                                                                       
Query: 246 gaagaatggattcacatccctagcttccagttctcgttcggccctcgctctcctttccac 305
           |||||| |||||| ||||||| |||||   |||| |||| ||| | ||||| |||||  |
Sbjct: 696 gaagaaaggattctcatcccttgcttctgcttctagttcagccttggctcttctttcagc 637

                                                                       
Query: 306 ctctacctcctccaaaatagagcgcctcgcgtttgtagtcttaaacttgttaacgagagt 365
           |||||||||||||| ||| |||||||| | ||||| || ||||||||||||||| ||| |
Sbjct: 636 ctctacctcctccagaatggagcgccttgtgtttgaagccttaaacttgttaaccagact 577

                                                                       
Query: 366 ctcaaatgctttagatccattttgttcaatgtatttctgtgcagctgaaattacatcgtc 425
            ||||| ||| | ||||||||||||||||||||| |||| |||||||| || ||||| ||
Sbjct: 576 ttcaaacgctcttgatccattttgttcaatgtatctctgcgcagctgatatcacatcatc 517

                                                                       
Query: 426 gggtttatctgaattttccttttttggaatataccagatgtttacaacttgctggttcac 485
           |||| ||||||| |  |||||| |||| || |||||||| || || | ||||||||| ||
Sbjct: 516 gggtctatctgactcatcctttcttgggatgtaccagatattaactatttgctggttgac 457

                                                                       
Query: 486 aatcattggccgcacaaaatgctcataaacatgcgctgcaccgttaaagtagggcaagac 545
           || |||||||| |||||| || ||||| ||||| || ||||| || ||||||||||||||
Sbjct: 456 aaccattggcctcacaaagtgttcatagacatgtgcagcaccattgaagtagggcaagac 397

                                                                       
Query: 546 caaccagcaattgaaaaacagttttccgtaagaccaaaaagggagccattcaattactgc 605
           |||||||||||||||||||| |||  | |||||||| ||||| |||||||||| ||| | 
Sbjct: 396 caaccagcaattgaaaaacaatttagcataagaccataaaggaagccattcaagtaccgg 337

                                                                       
Query: 606 agcaaaggtgagctcgaacagagtgataaacgagtacaacacccagtaagtgagccattg 665
           || ||| |||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 336 agaaaaagtgagctcaaatagagtgataaacgagtacaacacccagtatgtgagccattg 277

                     
Query: 666 ctgatcatct 675
           ||||||||||
Sbjct: 276 ctgatcatct 267
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>dbj|AK108482.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-F05, full
           insert sequence
          Length = 932

 Score =  337 bits (170), Expect = 3e-89
 Identities = 365/430 (84%)
 Strand = Plus / Minus

                                                                       
Query: 246 gaagaatggattcacatccctagcttccagttctcgttcggccctcgctctcctttccac 305
           |||||| |||||| ||||||| |||||   |||| |||| ||| | ||||| |||||  |
Sbjct: 696 gaagaagggattctcatcccttgcttctgcttctagttcagccttggctcttctttcagc 637

                                                                       
Query: 306 ctctacctcctccaaaatagagcgcctcgcgtttgtagtcttaaacttgttaacgagagt 365
           |||||||||||||| ||| |||||||| | ||||| || ||||||||||||||| ||| |
Sbjct: 636 ctctacctcctccagaatggagcgccttgtgtttgaagccttaaacttgttaaccagact 577

                                                                       
Query: 366 ctcaaatgctttagatccattttgttcaatgtatttctgtgcagctgaaattacatcgtc 425
            ||||| ||| | ||||||||||||||||||||| |||| |||||||| || ||||| ||
Sbjct: 576 ttcaaacgctcttgatccattttgttcaatgtatctctgcgcagctgatatcacatcatc 517

                                                                       
Query: 426 gggtttatctgaattttccttttttggaatataccagatgtttacaacttgctggttcac 485
           |||| ||||||| |  |||||| |||| || |||||||| || || | ||||||||| ||
Sbjct: 516 gggtctatctgactcatcctttcttgggatgtaccagatattaactatttgctggttgac 457

                                                                       
Query: 486 aatcattggccgcacaaaatgctcataaacatgcgctgcaccgttaaagtagggcaagac 545
           || |||||||| |||||| || ||||| ||||| || ||||| || ||||||||||||||
Sbjct: 456 aaccattggcctcacaaagtgttcatagacatgtgcagcaccattgaagtagggcaagac 397

                                                                       
Query: 546 caaccagcaattgaaaaacagttttccgtaagaccaaaaagggagccattcaattactgc 605
           |||||||||||||||||||| |||  | |||||||| ||||| |||||||||| ||| | 
Sbjct: 396 caaccagcaattgaaaaacaatttagcataagaccataaaggaagccattcaagtaccgg 337

                                                                       
Query: 606 agcaaaggtgagctcgaacagagtgataaacgagtacaacacccagtaagtgagccattg 665
           || ||| |||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 336 agaaaaagtgagctcaaatagagtgataaacgagtacaacacccagtatgtgagccattg 277

                     
Query: 666 ctgatcatct 675
           ||||||||||
Sbjct: 276 ctgatcatct 267
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>gb|AY110077.1| Zea mays CL20590_1 mRNA sequence
          Length = 1056

 Score =  232 bits (117), Expect = 1e-57
 Identities = 204/233 (87%)
 Strand = Plus / Minus

                                                                       
Query: 442 tccttttttggaatataccagatgtttacaacttgctggttcacaatcattggccgcaca 501
           ||||| |||||||||||||||||||||||||||||||| || ||||||||||||| ||||
Sbjct: 531 tccttctttggaatataccagatgtttacaacttgctgatttacaatcattggcctcaca 472

                                                                       
Query: 502 aaatgctcataaacatgcgctgcaccgttaaagtagggcaagaccaaccagcaattgaaa 561
           ||||||||||| ||||| || || || || || |  ||||| || |||||||||||||| 
Sbjct: 471 aaatgctcatatacatgtgcagctccattgaactgtggcaatactaaccagcaattgaag 412

                                                                       
Query: 562 aacagttttccgtaagaccaaaaagggagccattcaattactgcagcaaaggtgagctcg 621
           ||||| ||| | |||||||| ||||| |||||||| | ||| | ||||||||||||||||
Sbjct: 411 aacagctttgcataagaccagaaaggaagccattcgagtaccggagcaaaggtgagctcg 352

                                                                
Query: 622 aacagagtgataaacgagtacaacacccagtaagtgagccattgctgatcatc 674
           || ||||||||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct: 351 aatagagtgataaatgagtacagcacccagtacgtgagccattgctgatcatc 299



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 295 ctcctttccacctctacctcctccaaaatagagcgcct 332
           |||||||| |||||||||||||||| ||| ||||||||
Sbjct: 678 ctcctttcaacctctacctcctccagaattgagcgcct 641
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>dbj|AK102752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106M05, full
           insert sequence
          Length = 1084

 Score =  182 bits (92), Expect = 1e-42
 Identities = 200/236 (84%)
 Strand = Plus / Minus

                                                                       
Query: 439 ttttccttttttggaatataccagatgtttacaacttgctggttcacaatcattggccgc 498
           ||||| ||| |||||| ||||||||  ||||| | |||  | ||||||| ||||||||||
Sbjct: 529 ttttcttttcttggaacataccagacatttactatttgacgattcacaaacattggccgc 470

                                                                       
Query: 499 acaaaatgctcataaacatgcgctgcaccgttaaagtagggcaagaccaaccagcaattg 558
           ||||| || ||||||||||  || ||||| |  ||| | || |||||||||||||| |||
Sbjct: 469 acaaagtgatcataaacataagcagcaccatggaagcaaggtaagaccaaccagcagttg 410

                                                                       
Query: 559 aaaaacagttttccgtaagaccaaaaagggagccattcaattactgcagcaaaggtgagc 618
           || ||||  ||| | || ||||||||||| |||||||||||||||| |||||| || |||
Sbjct: 409 aagaacaactttgcataggaccaaaaaggaagccattcaattactggagcaaaagtaagc 350

                                                                   
Query: 619 tcgaacagagtgataaacgagtacaacacccagtaagtgagccattgctgatcatc 674
           || |||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 349 tcaaacaaagtgataaacgagtacagcacccagtaagtgagccattgctgatcatc 294
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>dbj|AK061806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A03, full
           insert sequence
          Length = 1072

 Score =  182 bits (92), Expect = 1e-42
 Identities = 200/236 (84%)
 Strand = Plus / Minus

                                                                       
Query: 439 ttttccttttttggaatataccagatgtttacaacttgctggttcacaatcattggccgc 498
           ||||| ||| |||||| ||||||||  ||||| | |||  | ||||||| ||||||||||
Sbjct: 472 ttttcttttcttggaacataccagacatttactatttgacgattcacaaacattggccgc 413

                                                                       
Query: 499 acaaaatgctcataaacatgcgctgcaccgttaaagtagggcaagaccaaccagcaattg 558
           ||||| || ||||||||||  || ||||| |  ||| | || |||||||||||||| |||
Sbjct: 412 acaaagtgatcataaacataagcagcaccatggaagcaaggtaagaccaaccagcagttg 353

                                                                       
Query: 559 aaaaacagttttccgtaagaccaaaaagggagccattcaattactgcagcaaaggtgagc 618
           || ||||  ||| | || ||||||||||| |||||||||||||||| |||||| || |||
Sbjct: 352 aagaacaactttgcataggaccaaaaaggaagccattcaattactggagcaaaagtaagc 293

                                                                   
Query: 619 tcgaacagagtgataaacgagtacaacacccagtaagtgagccattgctgatcatc 674
           || |||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 292 tcaaacaaagtgataaacgagtacagcacccagtaagtgagccattgctgatcatc 237
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  178 bits (90), Expect = 2e-41
 Identities = 204/242 (84%)
 Strand = Plus / Minus

                                                                            
Query: 351      cttgttaacgagagtctcaaatgctttagatccattttgttcaatgtatttctgtgcagc 410
                ||||||||| ||| | ||||| ||| | ||||||||||||||||||||| |||| |||||
Sbjct: 31427492 cttgttaaccagactttcaaacgctcttgatccattttgttcaatgtatctctgcgcagc 31427433

                                                                            
Query: 411      tgaaattacatcgtcgggtttatctgaattttccttttttggaatataccagatgtttac 470
                ||| || ||||| |||||| ||||||| |  |||||| |||| || |||||||| || ||
Sbjct: 31427432 tgatatcacatcatcgggtctatctgactcatcctttcttgggatgtaccagatattaac 31427373

                                                                            
Query: 471      aacttgctggttcacaatcattggccgcacaaaatgctcataaacatgcgctgcaccgtt 530
                 | ||||||||| |||| |||||||| |||||| || ||||| ||||| || ||||| ||
Sbjct: 31427372 tatttgctggttgacaaccattggcctcacaaagtgttcatagacatgtgcagcaccatt 31427313

                                                                            
Query: 531      aaagtagggcaagaccaaccagcaattgaaaaacagttttccgtaagaccaaaaagggag 590
                 |||||||||||||||||||||||||||||||||| |||  | |||||||| ||||| ||
Sbjct: 31427312 gaagtagggcaagaccaaccagcaattgaaaaacaatttagcataagaccataaaggaag 31427253

                  
Query: 591      cc 592
                ||
Sbjct: 31427252 cc 31427251



 Score =  105 bits (53), Expect = 2e-19
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                            
Query: 591      ccattcaattactgcagcaaaggtgagctcgaacagagtgataaacgagtacaacaccca 650
                |||||||| ||| | || ||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 31426963 ccattcaagtaccggagaaaaagtgagctcaaatagagtgataaacgagtacaacaccca 31426904

                                         
Query: 651      gtaagtgagccattgctgatcatct 675
                ||| |||||||||||||||||||||
Sbjct: 31426903 gtatgtgagccattgctgatcatct 31426879



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                            
Query: 246      gaagaatggattcacatccctagcttccagttctcgttcggccctcgctctcctttccac 305
                |||||| |||||| ||||||| |||||   |||| |||| ||| | ||||| |||||  |
Sbjct: 31427759 gaagaaaggattctcatcccttgcttctgcttctagttcagccttggctcttctttcagc 31427700

                                                               
Query: 306      ctctacctcctccaaaatagagcgcctcgcgtttgtagtcttaaact 352
                |||||||||||||| ||| |||||||| | ||||| || ||||||||
Sbjct: 31427699 ctctacctcctccagaatggagcgccttgtgtttgaagccttaaact 31427653
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>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0024K03
          Length = 119796

 Score =  178 bits (90), Expect = 2e-41
 Identities = 204/242 (84%)
 Strand = Plus / Minus

                                                                          
Query: 351    cttgttaacgagagtctcaaatgctttagatccattttgttcaatgtatttctgtgcagc 410
              ||||||||| ||| | ||||| ||| | ||||||||||||||||||||| |||| |||||
Sbjct: 110066 cttgttaaccagactttcaaacgctcttgatccattttgttcaatgtatctctgcgcagc 110007

                                                                          
Query: 411    tgaaattacatcgtcgggtttatctgaattttccttttttggaatataccagatgtttac 470
              ||| || ||||| |||||| ||||||| |  |||||| |||| || |||||||| || ||
Sbjct: 110006 tgatatcacatcatcgggtctatctgactcatcctttcttgggatgtaccagatattaac 109947

                                                                          
Query: 471    aacttgctggttcacaatcattggccgcacaaaatgctcataaacatgcgctgcaccgtt 530
               | ||||||||| |||| |||||||| |||||| || ||||| ||||| || ||||| ||
Sbjct: 109946 tatttgctggttgacaaccattggcctcacaaagtgttcatagacatgtgcagcaccatt 109887

                                                                          
Query: 531    aaagtagggcaagaccaaccagcaattgaaaaacagttttccgtaagaccaaaaagggag 590
               |||||||||||||||||||||||||||||||||| |||  | |||||||| ||||| ||
Sbjct: 109886 gaagtagggcaagaccaaccagcaattgaaaaacaatttagcataagaccataaaggaag 109827

                
Query: 591    cc 592
              ||
Sbjct: 109826 cc 109825



 Score =  105 bits (53), Expect = 2e-19
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                          
Query: 591    ccattcaattactgcagcaaaggtgagctcgaacagagtgataaacgagtacaacaccca 650
              |||||||| ||| | || ||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 109537 ccattcaagtaccggagaaaaagtgagctcaaatagagtgataaacgagtacaacaccca 109478

                                       
Query: 651    gtaagtgagccattgctgatcatct 675
              ||| |||||||||||||||||||||
Sbjct: 109477 gtatgtgagccattgctgatcatct 109453



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                          
Query: 246    gaagaatggattcacatccctagcttccagttctcgttcggccctcgctctcctttccac 305
              |||||| |||||| ||||||| |||||   |||| |||| ||| | ||||| |||||  |
Sbjct: 110333 gaagaaaggattctcatcccttgcttctgcttctagttcagccttggctcttctttcagc 110274

                                                             
Query: 306    ctctacctcctccaaaatagagcgcctcgcgtttgtagtcttaaact 352
              |||||||||||||| ||| |||||||| | ||||| || ||||||||
Sbjct: 110273 ctctacctcctccagaatggagcgccttgtgtttgaagccttaaact 110227
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>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0078N11
          Length = 155168

 Score =  178 bits (90), Expect = 2e-41
 Identities = 204/242 (84%)
 Strand = Plus / Minus

                                                                         
Query: 351   cttgttaacgagagtctcaaatgctttagatccattttgttcaatgtatttctgtgcagc 410
             ||||||||| ||| | ||||| ||| | ||||||||||||||||||||| |||| |||||
Sbjct: 62889 cttgttaaccagactttcaaacgctcttgatccattttgttcaatgtatctctgcgcagc 62830

                                                                         
Query: 411   tgaaattacatcgtcgggtttatctgaattttccttttttggaatataccagatgtttac 470
             ||| || ||||| |||||| ||||||| |  |||||| |||| || |||||||| || ||
Sbjct: 62829 tgatatcacatcatcgggtctatctgactcatcctttcttgggatgtaccagatattaac 62770

                                                                         
Query: 471   aacttgctggttcacaatcattggccgcacaaaatgctcataaacatgcgctgcaccgtt 530
              | ||||||||| |||| |||||||| |||||| || ||||| ||||| || ||||| ||
Sbjct: 62769 tatttgctggttgacaaccattggcctcacaaagtgttcatagacatgtgcagcaccatt 62710

                                                                         
Query: 531   aaagtagggcaagaccaaccagcaattgaaaaacagttttccgtaagaccaaaaagggag 590
              |||||||||||||||||||||||||||||||||| |||  | |||||||| ||||| ||
Sbjct: 62709 gaagtagggcaagaccaaccagcaattgaaaaacaatttagcataagaccataaaggaag 62650

               
Query: 591   cc 592
             ||
Sbjct: 62649 cc 62648



 Score =  105 bits (53), Expect = 2e-19
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                         
Query: 591   ccattcaattactgcagcaaaggtgagctcgaacagagtgataaacgagtacaacaccca 650
             |||||||| ||| | || ||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 62360 ccattcaagtaccggagaaaaagtgagctcaaatagagtgataaacgagtacaacaccca 62301

                                      
Query: 651   gtaagtgagccattgctgatcatct 675
             ||| |||||||||||||||||||||
Sbjct: 62300 gtatgtgagccattgctgatcatct 62276



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                         
Query: 246   gaagaatggattcacatccctagcttccagttctcgttcggccctcgctctcctttccac 305
             |||||| |||||| ||||||| |||||   |||| |||| ||| | ||||| |||||  |
Sbjct: 63156 gaagaaaggattctcatcccttgcttctgcttctagttcagccttggctcttctttcagc 63097

                                                            
Query: 306   ctctacctcctccaaaatagagcgcctcgcgtttgtagtcttaaact 352
             |||||||||||||| ||| |||||||| | ||||| || ||||||||
Sbjct: 63096 ctctacctcctccagaatggagcgccttgtgtttgaagccttaaact 63050
to top
>gb|BT017605.1| Zea mays clone EL01N0432C07.c mRNA sequence
          Length = 1249

 Score =  165 bits (83), Expect = 2e-37
 Identities = 191/227 (84%)
 Strand = Plus / Minus

                                                                       
Query: 449 ttggaatataccagatgtttacaacttgctggttcacaatcattggccgcacaaaatgct 508
           ||||||||||||| ||||| || | |||  ||||||||| |||||||||||||||||| |
Sbjct: 622 ttggaatataccatatgttcactatttggcggttcacaaacattggccgcacaaaatggt 563

                                                                       
Query: 509 cataaacatgcgctgcaccgttaaagtagggcaagaccaaccagcaattgaaaaacagtt 568
           | |||||||  || ||||| || ||  | ||||||||||||||||| || || ||||| |
Sbjct: 562 cgtaaacataggcagcaccattgaaccaaggcaagaccaaccagcagttaaagaacagct 503

                                                                       
Query: 569 ttccgtaagaccaaaaagggagccattcaattactgcagcaaaggtgagctcgaacagag 628
           || | || |||||||| || ||||| || || | || |||||| || ||||| |||| ||
Sbjct: 502 ttgcatacgaccaaaatggaagccactcgataattggagcaaaagttagctcaaacaaag 443

                                                          
Query: 629 tgataaacgagtacaacacccagtaagtgagccattgctgatcatct 675
           |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 442 tgataaacgagtacaacacccagtaagtgagccactgctgatcatct 396
to top
>gb|AY106282.1| Zea mays PCO142333 mRNA sequence
          Length = 802

 Score =  165 bits (83), Expect = 2e-37
 Identities = 254/311 (81%)
 Strand = Plus / Minus

                                                                       
Query: 365 tctcaaatgctttagatccattttgttcaatgtatttctgtgcagctgaaattacatcgt 424
           ||||||||||||  | ||| ||||||||||| ||| ||| ||||||||| |  ||||| |
Sbjct: 658 tctcaaatgcttctggtccgttttgttcaatatatctctctgcagctgacagaacatcat 599

                                                                       
Query: 425 cgggtttatctgaattttccttttttggaatataccagatgtttacaacttgctggttca 484
           | | |||| ||   || || ||| ||||||||||||| ||||| || | |||  ||||||
Sbjct: 598 cagatttacctagcttctcatttcttggaatataccatatgttcactatttggcggttca 539

                                                                       
Query: 485 caatcattggccgcacaaaatgctcataaacatgcgctgcaccgttaaagtagggcaaga 544
           ||| |||||||||||||||||| || |||||||  || ||||| || ||  | |||||||
Sbjct: 538 caaacattggccgcacaaaatggtcgtaaacataggcagcaccattgaaccaaggcaaga 479

                                                                       
Query: 545 ccaaccagcaattgaaaaacagttttccgtaagaccaaaaagggagccattcaattactg 604
           |||||||||| || || ||||| ||| | || |||||||| || ||||| || || | ||
Sbjct: 478 ccaaccagcagttaaagaacagctttgcatacgaccaaaatggaagccactcgataattg 419

                                                                       
Query: 605 cagcaaaggtgagctcgaacagagtgataaacgagtacaacacccagtaagtgagccatt 664
            |||||| || ||||| |||| ||||||||| |||||||||||||||||||||||||| |
Sbjct: 418 gagcaaaagttagctcaaacaaagtgataaatgagtacaacacccagtaagtgagccact 359

                      
Query: 665 gctgatcatct 675
           |||||||||||
Sbjct: 358 gctgatcatct 348
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                           
Query: 591     ccattcaattactgcagcaaaggtgagctcgaacagagtgataaacgagtacaacaccca 650
               |||||||||||||| |||||| || ||||| |||| ||||||||||||||||| ||||||
Sbjct: 6572278 ccattcaattactggagcaaaagtaagctcaaacaaagtgataaacgagtacagcaccca 6572337

                                       
Query: 651     gtaagtgagccattgctgatcatc 674
               ||||||||||||||||||||||||
Sbjct: 6572338 gtaagtgagccattgctgatcatc 6572361



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 124/154 (80%)
 Strand = Plus / Plus

                                                                           
Query: 439     ttttccttttttggaatataccagatgtttacaacttgctggttcacaatcattggccgc 498
               ||||| ||| |||||| ||||||||  ||||| | |||  | ||||||| ||||||||||
Sbjct: 6571825 ttttcttttcttggaacataccagacatttactatttgacgattcacaaacattggccgc 6571884

                                                                           
Query: 499     acaaaatgctcataaacatgcgctgcaccgttaaagtagggcaagaccaaccagcaattg 558
               ||||| || ||||||||||  || ||||| |  ||| | || |||||||||||||| |||
Sbjct: 6571885 acaaagtgatcataaacataagcagcaccatggaagcaaggtaagaccaaccagcagttg 6571944

                                                 
Query: 559     aaaaacagttttccgtaagaccaaaaagggagcc 592
               || ||||  ||| | || ||||||||||| ||||
Sbjct: 6571945 aagaacaactttgcataggaccaaaaaggaagcc 6571978
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>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0425F05
          Length = 162858

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                        
Query: 591  ccattcaattactgcagcaaaggtgagctcgaacagagtgataaacgagtacaacaccca 650
            |||||||||||||| |||||| || ||||| |||| ||||||||||||||||| ||||||
Sbjct: 6404 ccattcaattactggagcaaaagtaagctcaaacaaagtgataaacgagtacagcaccca 6463

                                    
Query: 651  gtaagtgagccattgctgatcatc 674
            ||||||||||||||||||||||||
Sbjct: 6464 gtaagtgagccattgctgatcatc 6487



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 124/154 (80%)
 Strand = Plus / Plus

                                                                        
Query: 439  ttttccttttttggaatataccagatgtttacaacttgctggttcacaatcattggccgc 498
            ||||| ||| |||||| ||||||||  ||||| | |||  | ||||||| ||||||||||
Sbjct: 5951 ttttcttttcttggaacataccagacatttactatttgacgattcacaaacattggccgc 6010

                                                                        
Query: 499  acaaaatgctcataaacatgcgctgcaccgttaaagtagggcaagaccaaccagcaattg 558
            ||||| || ||||||||||  || ||||| |  ||| | || |||||||||||||| |||
Sbjct: 6011 acaaagtgatcataaacataagcagcaccatggaagcaaggtaagaccaaccagcagttg 6070

                                              
Query: 559  aaaaacagttttccgtaagaccaaaaagggagcc 592
            || ||||  ||| | || ||||||||||| ||||
Sbjct: 6071 aagaacaactttgcataggaccaaaaaggaagcc 6104
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>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                         
Query: 591   ccattcaattactgcagcaaaggtgagctcgaacagagtgataaacgagtacaacaccca 650
             |||||||||||||| |||||| || ||||| |||| ||||||||||||||||| ||||||
Sbjct: 88654 ccattcaattactggagcaaaagtaagctcaaacaaagtgataaacgagtacagcaccca 88713

                                     
Query: 651   gtaagtgagccattgctgatcatc 674
             ||||||||||||||||||||||||
Sbjct: 88714 gtaagtgagccattgctgatcatc 88737



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 124/154 (80%)
 Strand = Plus / Plus

                                                                         
Query: 439   ttttccttttttggaatataccagatgtttacaacttgctggttcacaatcattggccgc 498
             ||||| ||| |||||| ||||||||  ||||| | |||  | ||||||| ||||||||||
Sbjct: 88201 ttttcttttcttggaacataccagacatttactatttgacgattcacaaacattggccgc 88260

                                                                         
Query: 499   acaaaatgctcataaacatgcgctgcaccgttaaagtagggcaagaccaaccagcaattg 558
             ||||| || ||||||||||  || ||||| |  ||| | || |||||||||||||| |||
Sbjct: 88261 acaaagtgatcataaacataagcagcaccatggaagcaaggtaagaccaaccagcagttg 88320

                                               
Query: 559   aaaaacagttttccgtaagaccaaaaagggagcc 592
             || ||||  ||| | || ||||||||||| ||||
Sbjct: 88321 aagaacaactttgcataggaccaaaaaggaagcc 88354
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>gb|AY107684.1| Zea mays PCO095447 mRNA sequence
          Length = 627

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                       
Query: 351 cttgttaacgagagtctcaaatgctttagatccattttgttcaatgtatttctgtgcagc 410
           ||||||||| ||| ||||||| ||||| ||||||||||| ||||||||  ||||||||||
Sbjct: 86  cttgttaacaagattctcaaacgcttttgatccattttgctcaatgtacctctgtgcagc 27

                       
Query: 411 tgaaattacatc 422
           ||||||||||||
Sbjct: 26  tgaaattacatc 15
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>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 607   gcaaaggtgagctcgaacagagtgataaacgagtacaacacccagtaagtgagccattgc 666
             ||||| |||||||| ||||| || || || ||||||| ||||||||| ||||||||||| 
Sbjct: 21323 gcaaatgtgagctcaaacagtgttattaatgagtacatcacccagtatgtgagccattgt 21382

                     
Query: 667   tgatcatc 674
             ||||||||
Sbjct: 21383 tgatcatc 21390
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0007P22, complete sequence
          Length = 148068

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                          
Query: 607    gcaaaggtgagctcgaacagagtgataaacgagtacaacacccagtaagtgagccattgc 666
              ||||| |||||||| ||||| || || || ||||||| ||||||||| ||||||||||| 
Sbjct: 132841 gcaaatgtgagctcaaacagtgttattaatgagtacatcacccagtatgtgagccattgt 132900

                      
Query: 667    tgatcatc 674
              ||||||||
Sbjct: 132901 tgatcatc 132908
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                            
Query: 607      gcaaaggtgagctcgaacagagtgataaacgagtacaacacccagtaagtgagccattgc 666
                ||||| |||||||| ||||| || || || ||||||| ||||||||| ||||||||||| 
Sbjct: 22319975 gcaaatgtgagctcaaacagtgttattaatgagtacatcacccagtatgtgagccattgt 22319916

                        
Query: 667      tgatcatc 674
                ||||||||
Sbjct: 22319915 tgatcatc 22319908
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>dbj|AK103473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130B07, full
           insert sequence
          Length = 1430

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 607 gcaaaggtgagctcgaacagagtgataaacgagtacaacacccagtaagtgagccattgc 666
           ||||| |||||||| ||||| || || || ||||||| ||||||||| ||||||||||| 
Sbjct: 439 gcaaatgtgagctcaaacagtgttattaatgagtacatcacccagtatgtgagccattgt 380

                   
Query: 667 tgatcatc 674
           ||||||||
Sbjct: 379 tgatcatc 372
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                            
Query: 607      gcaaaggtgagctcgaacagagtgataaacgagtacaacacccagtaagtgagccattgc 666
                ||||| |||||||| ||||| || || || ||||||| ||||||||| ||||||||||| 
Sbjct: 22629886 gcaaatgtgagctcaaacagtgttattaatgagtacatcacccagtatgtgagccattgt 22629827

                        
Query: 667      tgatcatc 674
                ||||||||
Sbjct: 22629826 tgatcatc 22629819
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>ref|NM_191863.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 387

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 646 acccagtaagtgagccattgctgatcatc 674
           |||||||| ||||||||||||||||||||
Sbjct: 59  acccagtaggtgagccattgctgatcatc 31
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 646      acccagtaagtgagccattgctgatcatc 674
                |||||||| ||||||||||||||||||||
Sbjct: 30358093 acccagtaggtgagccattgctgatcatc 30358121
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>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0042A10
          Length = 146840

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 646    acccagtaagtgagccattgctgatcatc 674
              |||||||| ||||||||||||||||||||
Sbjct: 146412 acccagtaggtgagccattgctgatcatc 146440
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>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456A01
          Length = 143710

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 646   acccagtaagtgagccattgctgatcatc 674
             |||||||| ||||||||||||||||||||
Sbjct: 43820 acccagtaggtgagccattgctgatcatc 43848
to top
>emb|AL442223.13| Human DNA sequence from clone RP11-426P2 on chromosome 1 Contains the
             5' end of a variant of the DAB1 gene for disabled homolog
             1 (Drosophila) and a CpG island, complete sequence
          Length = 54683

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 385   ttttgttcaatgtatttctgtg 406
             ||||||||||||||||||||||
Sbjct: 11530 ttttgttcaatgtatttctgtg 11509
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>gb|AC016205.7| Homo sapiens, clone RP11-25C13, complete sequence
          Length = 167292

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 544   accaaccagcaattgaaaaaca 565
             ||||||||||||||||||||||
Sbjct: 24817 accaaccagcaattgaaaaaca 24796
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>gb|AC115714.14| Mus musculus chromosome 12, clone RP23-477C24, complete sequence
          Length = 164272

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 241    gggtggaagaatggattcaca 261
              |||||||||||||||||||||
Sbjct: 100138 gggtggaagaatggattcaca 100158
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>gb|BC103504.1| Homo sapiens cDNA clone IMAGE:40001827, with apparent retained intron
          Length = 3555

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 141  aaatatagtaataagctaaaa 161
            |||||||||||||||||||||
Sbjct: 2708 aaatatagtaataagctaaaa 2728
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>gb|AC022023.7| Homo sapiens chromosome 10 clone RP11-411P18, complete sequence
          Length = 160420

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 141    aaatatagtaataagctaaaa 161
              |||||||||||||||||||||
Sbjct: 114245 aaatatagtaataagctaaaa 114265
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>gb|AC108035.3| Homo sapiens BAC clone RP11-140P5 from 4, complete sequence
          Length = 137055

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 438   attttccttttttggaatataccag 462
             |||||||||||||| ||||||||||
Sbjct: 99415 attttccttttttgtaatataccag 99391
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>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete
             sequence
          Length = 191270

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 498   cacaaaatgctcataaacatg 518
             |||||||||||||||||||||
Sbjct: 32477 cacaaaatgctcataaacatg 32457
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>emb|AL355543.13| Human DNA sequence from clone RP11-86E10 on chromosome 10 Contains the
              ADRB1 gene for adrenergic beta-1- receptor, a
              ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1)
              pseudogene, the gene for CTCL tumor antigen L14-2 (FLJ10188
              DKFZp762M1412 FLJ32946 FLJ37179 FLJ21086 FLJ32946
              FLJ35301), the 5' end of the TDRD1 gene for tudor domain
              containing 1 and three CpG islands, complete sequence
          Length = 179009

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 141    aaatatagtaataagctaaaa 161
              |||||||||||||||||||||
Sbjct: 122330 aaatatagtaataagctaaaa 122310
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>gb|AC145914.4| Gallus gallus BAC clone CH261-78G10 from chromosome unknown, complete
              sequence
          Length = 228201

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    atcatacaaaatgcaggacta 141
              |||||||||||||||||||||
Sbjct: 133752 atcatacaaaatgcaggacta 133772
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>gb|AC163609.4| Mus musculus chromosome 1, clone RP24-128P11, complete sequence
          Length = 164997

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 499   acaaaatgctcataaacatgc 519
             |||||||||||||||||||||
Sbjct: 37747 acaaaatgctcataaacatgc 37767
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>gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, complete sequence
          Length = 168421

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   cattttgttcaatgtatttc 402
             ||||||||||||||||||||
Sbjct: 66843 cattttgttcaatgtatttc 66862
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 300      ttccacctctacctcctccaaaat 323
                |||||||||| |||||||||||||
Sbjct: 11059141 ttccacctctccctcctccaaaat 11059164
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>emb|BX470177.14| Zebrafish DNA sequence from clone DKEY-31F3 in linkage group 3,
           complete sequence
          Length = 59444

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gagctttccagaatcagtaa 237
           ||||||||||||||||||||
Sbjct: 841 gagctttccagaatcagtaa 860
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>emb|BX908785.10| Zebrafish DNA sequence from clone DKEYP-51A2 in linkage group 3,
             complete sequence
          Length = 68916

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   aaatgctcataaacatgcgc 521
             ||||||||||||||||||||
Sbjct: 47149 aaatgctcataaacatgcgc 47130
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>emb|BX649247.9| Zebrafish DNA sequence from clone DKEY-181C10 in linkage group 15,
              complete sequence
          Length = 194916

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    gagaaatcatacaaaatgca 135
              ||||||||||||||||||||
Sbjct: 159195 gagaaatcatacaaaatgca 159176
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>gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome 8, complete sequence
          Length = 167913

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   gaaatcatacaaaatgcagg 137
             ||||||||||||||||||||
Sbjct: 13049 gaaatcatacaaaatgcagg 13068
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>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete sequence
          Length = 201483

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gaaatcatacaaaatgcagg 137
             ||||||||||||||||||||
Sbjct: 20008 gaaatcatacaaaatgcagg 19989
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>gb|AC124525.3| Mus musculus BAC clone RP23-406I17 from chromosome 2, complete sequence
          Length = 173181

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    ttttgttcaatgtatttctg 404
              ||||||||||||||||||||
Sbjct: 152374 ttttgttcaatgtatttctg 152393
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>ref|XM_648522.1| Entamoeba histolytica HM-1:IMSS deoxyhypusine synthase, putative
           (77.t00015) partial mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 aatgcaggactaaatatagtaata 153
           |||||||||| |||||||||||||
Sbjct: 602 aatgcaggacaaaatatagtaata 579
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>gb|AY935269.1| Antirrhinum majus plena (PLE) gene, complete sequence
          Length = 85060

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 616   agctcgaacagagtgataaacgagtacaacacccagtaagtgagccattgctgatc 671
             |||||||| || || ||||||||||| |  |||||||| || ||||| ||||||||
Sbjct: 53280 agctcgaatagcgttataaacgagtatataacccagtatgttagccactgctgatc 53225
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>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    agcaattgaaaaacagtttt 570
              ||||||||||||||||||||
Sbjct: 190893 agcaattgaaaaacagtttt 190874
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>gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, complete sequence
          Length = 208416

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ttatctgaattttccttttt 449
             ||||||||||||||||||||
Sbjct: 68597 ttatctgaattttccttttt 68578
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>emb|AL590105.19| Human DNA sequence from clone RP11-273H7 on chromosome 10 Contains the
             5' end of the gene for protein kinase (PKE), gene
             KIAA1674, gene LOC170394, the 5' end of a novel gene and
             six CpG islands, complete sequence
          Length = 132772

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 285   ggccctcgctctcctttccacctctacctcct 316
             |||||||||||||| |||| |||| |||||||
Sbjct: 66646 ggccctcgctctcccttcctcctcgacctcct 66615
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>emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11 on chromosome 6p24.1-24.3,
             complete sequence
          Length = 94749

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 139   ctaaatatagtaataagctaaaaa 162
             |||| |||||||||||||||||||
Sbjct: 41204 ctaattatagtaataagctaaaaa 41227
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>gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, complete sequence
          Length = 187100

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   cattttgttcaatgtatttc 402
             ||||||||||||||||||||
Sbjct: 88298 cattttgttcaatgtatttc 88317
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>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence
          Length = 167588

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 300   ttccacctctacctcctccaaaat 323
             |||||||||| |||||||||||||
Sbjct: 73981 ttccacctctccctcctccaaaat 73958
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>gb|BC050097.1| Homo sapiens leucine rich repeat containing 27, mRNA (cDNA clone
            MGC:48601 IMAGE:5273395), complete cds
          Length = 1753

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 285  ggccctcgctctcctttccacctctacctcct 316
            |||||||||||||| |||| |||| |||||||
Sbjct: 1534 ggccctcgctctcccttcctcctcgacctcct 1503
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>emb|AL596182.28| Mouse DNA sequence from clone RP23-303F24 on chromosome 11 Contains a
             pseudogene similar to part of glyceraldehyde-3-phosphate
             dehydrogenase (Gapd), the Irf1 gene for interferon
             regulatory factor 1, a novel gene, the Slc22a5 gene for
             solute carrier family 22 (organic cation transporter)
             member 5, a ribosomal protein L27a (Rpl27a) pseudogene, a
             cyclin-dependent kinase 4 (Cdk4) pseudogene and two CpG
             islands, complete sequence
          Length = 191494

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 602   ctgcagcaaaggtgagctcg 621
             ||||||||||||||||||||
Sbjct: 38196 ctgcagcaaaggtgagctcg 38215
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>emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in linkage group 10,
             complete sequence
          Length = 178736

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   gagaaatcatacaaaatgca 135
             ||||||||||||||||||||
Sbjct: 32582 gagaaatcatacaaaatgca 32563
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>gb|AC117372.2| Homo sapiens 12 BAC RP11-266O15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165301

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    attttgttcaatgtatttct 403
              ||||||||||||||||||||
Sbjct: 154034 attttgttcaatgtatttct 154015
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>gb|AC106033.4| Homo sapiens chromosome 18, clone CTD-2025K11, complete sequence
          Length = 95930

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   atctgaattttccttttttg 451
             ||||||||||||||||||||
Sbjct: 55029 atctgaattttccttttttg 55048
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>gb|AC104580.5| Homo sapiens chromosome 8, clone RP11-1084G15, complete sequence
          Length = 179270

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   tgaattttccttttttggaa 454
             ||||||||||||||||||||
Sbjct: 51294 tgaattttccttttttggaa 51313
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>gb|AC022828.10| Homo sapiens chromosome 8, clone RP11-119K24, complete sequence
          Length = 137289

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    tgaattttccttttttggaa 454
              ||||||||||||||||||||
Sbjct: 110173 tgaattttccttttttggaa 110192
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>dbj|AK080949.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430217B02 product:interferon
           regulatory factor 1, full insert sequence
          Length = 3074

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 602 ctgcagcaaaggtgagctcg 621
           ||||||||||||||||||||
Sbjct: 218 ctgcagcaaaggtgagctcg 237
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 431      tatctgaattttcctttttt 450
                ||||||||||||||||||||
Sbjct: 17035686 tatctgaattttcctttttt 17035705
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 300      ttccacctctacctcctccaaaat 323
                |||||||||| |||||||||||||
Sbjct: 11055904 ttccacctctccctcctccaaaat 11055927
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>gb|AC046130.25| Homo sapiens 12 BAC RP11-847H18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176600

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    attttgttcaatgtatttct 403
              ||||||||||||||||||||
Sbjct: 102253 attttgttcaatgtatttct 102234
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>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   tatctgaattttcctttttt 450
             ||||||||||||||||||||
Sbjct: 76178 tatctgaattttcctttttt 76197
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>dbj|AK098652.1| Homo sapiens cDNA FLJ25786 fis, clone TST06852
          Length = 1809

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 285  ggccctcgctctcctttccacctctacctcct 316
            |||||||||||||| |||| |||| |||||||
Sbjct: 1606 ggccctcgctctcccttcctcctcgacctcct 1575
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>gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete sequence
          Length = 237167

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    ctacgtaatatcaaatctaaatat 54
             |||||||| |||||||||||||||
Sbjct: 88781 ctacgtaagatcaaatctaaatat 88804
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>dbj|AP003729.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-126A9, complete
             sequence
          Length = 49870

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   cttttttggaatataccaga 463
             ||||||||||||||||||||
Sbjct: 31630 cttttttggaatataccaga 31611
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>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence
          Length = 1332022

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    aatatagtaataagctaaaa 161
              ||||||||||||||||||||
Sbjct: 410249 aatatagtaataagctaaaa 410230
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>gb|AC005968.1|AC005968 Homo sapiens chromosome 18, clone hRPK.24_A_23, complete sequence
          Length = 145603

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   ttatctgaattttccttttt 449
             ||||||||||||||||||||
Sbjct: 21422 ttatctgaattttccttttt 21441
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>emb|CR376732.12| Zebrafish DNA sequence from clone DKEY-146H23 in linkage group 3,
              complete sequence
          Length = 171210

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    gagaaatcatacaaaatgca 135
              ||||||||||||||||||||
Sbjct: 109444 gagaaatcatacaaaatgca 109425
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>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 300    ttccacctctacctcctccaaaat 323
              |||||||||| |||||||||||||
Sbjct: 102626 ttccacctctccctcctccaaaat 102649
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 431      tatctgaattttcctttttt 450
                ||||||||||||||||||||
Sbjct: 17044726 tatctgaattttcctttttt 17044745
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>emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, complete sequence
          Length = 160710

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   gagctttccagaatcagtaa 237
             ||||||||||||||||||||
Sbjct: 88996 gagctttccagaatcagtaa 89015
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>emb|AL844569.4| Mouse DNA sequence from clone RP23-230H3 on chromosome 2, complete
              sequence
          Length = 198872

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    ttttgttcaatgtatttctg 404
              ||||||||||||||||||||
Sbjct: 103904 ttttgttcaatgtatttctg 103885
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>emb|AL352955.7|CNS05TBU Human chromosome 14 DNA sequence BAC R-1141N12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158099

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    ttatctgaattttccttttt 449
              ||||||||||||||||||||
Sbjct: 133230 ttatctgaattttccttttt 133249
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>emb|AL096806.1|CNS00YVC Homo sapiens genomic region containing hypervariable minisatellites
             chromosome 10[10q26.3] of Homo sapiens
          Length = 28712

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 285   ggccctcgctctcctttccacctctacctcct 316
             |||||||||||||| |||| |||| |||||||
Sbjct: 12548 ggccctcgctctcccttcctcctcgacctcct 12579
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>emb|AL672035.7| Mouse DNA sequence from clone RP23-314N8 on chromosome X, complete
              sequence
          Length = 154002

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    tgaattttccttttttggaa 454
              ||||||||||||||||||||
Sbjct: 114817 tgaattttccttttttggaa 114798
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>dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-402K1, complete
             sequence
          Length = 187735

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   cttttttggaatataccaga 463
             ||||||||||||||||||||
Sbjct: 22171 cttttttggaatataccaga 22152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,995,392
Number of Sequences: 3902068
Number of extensions: 6995392
Number of successful extensions: 142025
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141390
Number of HSP's gapped (non-prelim): 627
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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