ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags16l16 |
|---|---|
| Clone Library Name | barley_pub |
>DAPF2_ANASP (Q8YVD0) Diaminopimelate epimerase 2 (EC 5.1.1.7) (DAP epimerase 2)| Length = 279 Score = 115 bits (289), Expect = 9e-26 Identities = 57/109 (52%), Positives = 68/109 (62%) Frame = -1 Query: 646 VLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXX 467 V V + L IGPKFEHH FP RTNTEF+QV+SR +LKMRVWER Sbjct: 171 VEDVAAIPLEIIGPKFEHHPAFPQRTNTEFIQVVSRDYLKMRVWERGAGITLACGTGACA 230 Query: 466 XXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 VL GR++R V+LPGGPLEIEW E + +YMTGPA+ VF G + Sbjct: 231 SLVAAVLTGRSDRLATVELPGGPLEIEWSEVDQRIYMTGPADRVFTGKL 279
>DAPF_SYNY3 (P74667) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 279 Score = 114 bits (286), Expect = 2e-25 Identities = 55/104 (52%), Positives = 64/104 (61%) Frame = -1 Query: 637 VDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXX 458 VD L L++IGP FEHH F RTNTEF+QVL LKMRVWER Sbjct: 172 VDSLNLTEIGPLFEHHPQFSQRTNTEFIQVLGSDRLKMRVWERGAGITLACGTGACATVV 231 Query: 457 XXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 VL GR +R+C V+LPGG LEIEW +N +YMTGPA+ VF G Sbjct: 232 AAVLTGRGDRRCTVELPGGNLEIEWSAQDNRLYMTGPAQRVFSG 275
>DAPF_SYNEL (Q8DGM2) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 93.2 bits (230), Expect = 6e-19 Identities = 51/114 (44%), Positives = 63/114 (55%), Gaps = 5/114 (4%) Frame = -1 Query: 646 VLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXX 467 V V L L+ +GP+FEHH FP RTNTEFVQVL L+MRVWER Sbjct: 172 VEDVAALDLAVLGPQFEHHPAFPQRTNTEFVQVLGSDRLRMRVWERGAGMTLACGTGACA 231 Query: 466 XXXXXVL-----EGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 VL G + + V+LPGG L+I W + H+YMTGPA AVF G++ Sbjct: 232 TLVAAVLTGCLSPGGDQAQATVELPGGDLQIRWDLPSQHLYMTGPALAVFSGTL 285
>DAPF_BACTN (Q8AAB7) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 267 Score = 90.1 bits (222), Expect = 5e-18 Identities = 42/109 (38%), Positives = 59/109 (54%) Frame = -1 Query: 646 VLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXX 467 V + + L +IGP+ E++ +FP RTN EF Q++ + ++MRVWER Sbjct: 157 VEDITQINLPEIGPQLENYHLFPDRTNVEFAQIVGKDTIRMRVWERGSGITQACGTGACA 216 Query: 466 XXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 VL G A RKC + + GG + IEW E H+ MTGPA VF G + Sbjct: 217 TAVAAVLHGLAGRKCDIIMDGGTVTIEWEEATGHILMTGPATKVFDGEM 265
>DAPF_PSEFL (O05322) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 86.3 bits (212), Expect = 8e-17 Identities = 40/111 (36%), Positives = 57/111 (51%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 L+V ++ + ++GPK EHH FPAR N F+QV+ R ++RVWER Sbjct: 164 LRVADINSAPVHELGPKIEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGA 223 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + ++DLPGG L IEW V MTGPA V+ G + Sbjct: 224 CAAAVAAISQGWMDSPLLIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQV 274
>DAPF_PSESM (Q88B09) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 84.7 bits (208), Expect = 2e-16 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 VL+VDD+ + +GPK EHH FPAR N F+ V+ R ++RVWER Sbjct: 163 VLRVDDINNAPVHTLGPKIEHHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTG 222 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + ++DLPGG L IEW + V MTGPA V+ G + Sbjct: 223 ACAAAVAAISQGWMDSPLLIDLPGGRLSIEWAGPGHPVMMTGPATRVYEGQV 274
>DAPF_RHIME (Q92L46) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 301 Score = 84.3 bits (207), Expect = 3e-16 Identities = 39/102 (38%), Positives = 54/102 (52%) Frame = -1 Query: 625 KLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVL 446 +L GP E+H +FP R N ++ SR + +R WER Sbjct: 178 ELDRFGPLLENHPIFPERANISIARIRSRQEMDLRTWERGAGLTLACGSAACAAAVNGAR 237 Query: 445 EGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 GR ER V++PGGPL+IEWRE ++HV MTGPAE + G++ Sbjct: 238 TGRTERMVTVNVPGGPLKIEWRERDDHVIMTGPAEWEWSGTV 279
>DAPF_PASMU (P57962) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 82.4 bits (202), Expect = 1e-15 Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+QVDD++ +++ GP E+HE FP R N F+QV+ R H+K+RV+ER Sbjct: 161 VVQVDDIQTANVEQLGPLLENHERFPERVNAGFMQVIHRGHIKLRVYERGAGETQACGSG 220 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 V++G + K VDLPGG L IEW ++MTG A V+ G I Sbjct: 221 ACAAVAVGVMQGLLDSKVQVDLPGGSLIIEWEGVGKPLFMTGDATHVYDGVI 272
>DAPF_YERPE (P46357) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 81.3 bits (199), Expect = 2e-15 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+QVDD+ ++++ GP E+HE FP R N F+QV+SR H+++RV+ER Sbjct: 161 VMQVDDVSVANVALLGPVLENHERFPERANIGFMQVVSRDHIRLRVYERGAGETQACGSG 220 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 V++ V+LPGG L I W+ + +YMTGPA V+ G I Sbjct: 221 ACAAVAVGVVQDLLNENVHVELPGGSLHIRWQGPGHPLYMTGPATHVYDGFI 272
>DAPF_VIBPA (Q87KJ4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 80.5 bits (197), Expect = 4e-15 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V VDD+ +D+ GP E HE FP R N F+QV+SR H+++RV+ER Sbjct: 163 VTVVDDVDTADVDTLGPLLESHERFPERVNAGFMQVVSRDHIRLRVYERGAGETQACGSG 222 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 +L+G + V LPGG L I W+ ++MTGPA VF G + Sbjct: 223 ACGAVAVGILQGLLDESVKVSLPGGELHISWQGPGKPLFMTGPATHVFDGQL 274
>DAPF_PSEPK (Q88CF3) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 80.5 bits (197), Expect = 4e-15 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLKLS---DIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 VL+VDD++ + ++GPK E+H FP R N F+QV+ R +RVWER Sbjct: 163 VLRVDDVQTAPVHELGPKIENHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTG 222 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + +DLPGG L IEW V MTGPA V+ G + Sbjct: 223 ACAAAVAAISQGWMDSPVSLDLPGGRLHIEWAGPGKPVMMTGPAVRVYEGQV 274
>DAPF_HAEIN (P44859) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 80.5 bits (197), Expect = 4e-15 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+QVDD++ +++ GP E HE FP R N F+Q++++ H+K+RV+ER Sbjct: 161 VVQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSG 220 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 +++G VDLPGG L IEW + +YMTG A ++ G I Sbjct: 221 ACAAVAVGIMQGLLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFI 272
>DAPF_LEPIC (Q72W63) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 281 Score = 79.3 bits (194), Expect = 9e-15 Identities = 39/105 (37%), Positives = 51/105 (48%) Frame = -1 Query: 634 DDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXX 455 D+ + IGP E H +FP R N EFV + + HL R WER Sbjct: 176 DEFPVRGIGPLIERHSIFPKRVNVEFVTIRGKDHLYQRTWERGAGETLACGTGACAVMVA 235 Query: 454 XVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 L GR+ + +DL GG L I+W+E N + MTGPA +F G I Sbjct: 236 GNLTGRSGKDVQIDLRGGTLRIQWQESGN-ILMTGPAREIFSGEI 279
>DAPF_BRUSU (Q8FYF0) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 303 Score = 78.6 bits (192), Expect = 2e-14 Identities = 40/101 (39%), Positives = 50/101 (49%) Frame = -1 Query: 625 KLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVL 446 +L GP E+H +FP R N V S + +R WER Sbjct: 178 ELDKFGPLLENHPIFPERANISIAHVTSSDTIDLRTWERGAGLTRACGSAACAAAVSAAR 237 Query: 445 EGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGS 323 GR RK V++PGGPL IEWR+D +HV MTGPAE F G+ Sbjct: 238 TGRTGRKVTVNVPGGPLLIEWRDD-DHVMMTGPAEWEFSGT 277
>DAPF_BRUME (Q8YJF0) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 303 Score = 78.6 bits (192), Expect = 2e-14 Identities = 40/101 (39%), Positives = 50/101 (49%) Frame = -1 Query: 625 KLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVL 446 +L GP E+H +FP R N V S + +R WER Sbjct: 178 ELDKFGPLLENHPIFPERANISIAHVTSSDTIDLRTWERGAGLTRACGSAACAAAVSAAR 237 Query: 445 EGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGS 323 GR RK V++PGGPL IEWR+D +HV MTGPAE F G+ Sbjct: 238 TGRTGRKVTVNVPGGPLLIEWRDD-DHVMMTGPAEWEFSGT 277
>DAPF_ECOLI (P0A6K1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 78.6 bits (192), Expect = 2e-14 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+QVDD+ + +GP E HE FP R N F+QV+ R H+++RV+ER Sbjct: 161 VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG 220 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + V+LPGG L+I W+ + +YMTGPA V+ G I Sbjct: 221 ACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
>DAPF_ECOL6 (Q8FBN6) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 78.6 bits (192), Expect = 2e-14 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+QVDD+ + +GP E HE FP R N F+QV+ R H+++RV+ER Sbjct: 161 VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG 220 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + V+LPGG L+I W+ + +YMTGPA V+ G I Sbjct: 221 ACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
>DAPF_ECO57 (P0A6K2) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 78.6 bits (192), Expect = 2e-14 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+QVDD+ + +GP E HE FP R N F+QV+ R H+++RV+ER Sbjct: 161 VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG 220 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + V+LPGG L+I W+ + +YMTGPA V+ G I Sbjct: 221 ACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272
>DAPF_VIBVY (Q7MQC1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 78.6 bits (192), Expect = 2e-14 Identities = 38/106 (35%), Positives = 54/106 (50%) Frame = -1 Query: 637 VDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXX 458 VD ++ +GP E HE FP R N F+QV++R +++RV+ER Sbjct: 169 VDSAEVETLGPLLESHERFPERVNAGFMQVVNREQIRLRVYERGAGETQACGSGACGAVA 228 Query: 457 XXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 +L+G + V LPGG L I W+ +YMTGPA VF G + Sbjct: 229 VGILQGLLDENVTVSLPGGDLHIHWQGPGKPLYMTGPATHVFDGQL 274
>DAPF_VIBVU (Q8DD81) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 78.6 bits (192), Expect = 2e-14 Identities = 38/106 (35%), Positives = 54/106 (50%) Frame = -1 Query: 637 VDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXX 458 VD ++ +GP E HE FP R N F+QV++R +++RV+ER Sbjct: 169 VDSAEVETLGPLLESHERFPERVNAGFMQVVNREQIRLRVYERGAGETQACGSGACGAVA 228 Query: 457 XXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 +L+G + V LPGG L I W+ +YMTGPA VF G + Sbjct: 229 VGILQGLLDENVTVSLPGGDLHIHWQGPGKPLYMTGPATHVFDGQL 274
>DAPF_VIBCH (Q9KVL6) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 78.6 bits (192), Expect = 2e-14 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V VDD++ + +GP E HE FP R N F+QV+SR + +RV+ER Sbjct: 163 VTVVDDIRTAAVETLGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSG 222 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 +L+G + + V LPGG LEI W+ +YMTGPA ++ G I Sbjct: 223 ACAAVAVGILQGLLDEQVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274
>DAPF_SALTY (P0A1F2) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 77.0 bits (188), Expect = 5e-14 Identities = 38/111 (34%), Positives = 58/111 (52%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 ++V VD + +GP E HE FP R N F+QV+ R H+++RV+ER Sbjct: 162 IQVDNVDTAAVETLGPVLESHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGA 221 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + V+LPGG L+I W+ + +YMTGPA ++ G I Sbjct: 222 CAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFI 272
>DAPF_SALTI (P0A1F3) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 77.0 bits (188), Expect = 5e-14 Identities = 38/111 (34%), Positives = 58/111 (52%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 ++V VD + +GP E HE FP R N F+QV+ R H+++RV+ER Sbjct: 162 IQVDNVDTAAVETLGPVLESHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGA 221 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + V+LPGG L+I W+ + +YMTGPA ++ G I Sbjct: 222 CAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFI 272
>DAPF_PSEAE (Q51564) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 76.6 bits (187), Expect = 6e-14 Identities = 39/111 (35%), Positives = 53/111 (47%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 L+V VD + +GP+ E H FP + N F+QVL H ++RVWER Sbjct: 164 LRVENVDSAPVHSLGPQLEVHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGA 223 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + +G + +DLPGG L IEW V MTGPA V+ G + Sbjct: 224 CAAAVAGIRQGWLQSPVQIDLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQV 274
>DAPF_BRAJA (Q89X45) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 291 Score = 76.6 bits (187), Expect = 6e-14 Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 3/111 (2%) Frame = -1 Query: 646 VLQVDDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 + VDD+ D+ GP E+H +FP R N ++ R H+ +R WER Sbjct: 171 IFWVDDVNAYDLARFGPLLENHPIFPERANITLAHIVDRDHITIRTWERGAGLTRACGSA 230 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGS 323 RAER + LPGG L IEWRE ++HV MTG A + G+ Sbjct: 231 ACATAVAAARLKRAERNVEITLPGGKLGIEWRERDDHVLMTGTATFEYEGN 281
>DAPF_SHEON (Q8E9H5) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 275 Score = 76.3 bits (186), Expect = 8e-14 Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDL---KLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 VL V+D+ +++IG HE FP N F+QV++ H+K+RV+ER Sbjct: 162 VLDVEDVANANVAEIGALLTKHERFPRGVNVGFMQVVNAGHIKLRVYERGAAETLACGTG 221 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 ++G+ +++ VDLPGG L I W + ++MTGPA+ V+ G I Sbjct: 222 ACAAVVVGQIQGKLDQQVQVDLPGGSLTINWEGEGKPLWMTGPAQHVYDGQI 273
>DAPF_LEPIN (Q8F9V5) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 281 Score = 76.3 bits (186), Expect = 8e-14 Identities = 38/105 (36%), Positives = 50/105 (47%) Frame = -1 Query: 634 DDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXX 455 D+ + IGP E H +FP R N EFV + + HL R WER Sbjct: 176 DEFPVRGIGPLIERHSIFPKRVNVEFVTIRGKDHLYQRTWERGAGETLACGTGACAVMVA 235 Query: 454 XVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 L R+ + +DL GG L I+W+E N + MTGPA +F G I Sbjct: 236 GNLTRRSGKDVQIDLRGGTLRIQWQESGN-ILMTGPAREIFSGEI 279
>DAPF_HAEDU (Q7VPN0) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 75.5 bits (184), Expect = 1e-13 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 VLQVDD++ + +G E H FP R N F+Q++ R H+K+RV+ER Sbjct: 161 VLQVDDIEQATVHQLGALLEKHHRFPERANVGFMQIIDRHHIKLRVFERGVGETKACGSG 220 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 +++G + V LPGG L+IEW+ +YMTG A ++ G I Sbjct: 221 ACAAVAVGIMQGVLDANVQVSLPGGTLQIEWQGKGKPLYMTGTATHIYDGFI 272
>DAPF_AGRT5 (Q8UC03) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 299 Score = 73.9 bits (180), Expect = 4e-13 Identities = 41/105 (39%), Positives = 50/105 (47%), Gaps = 4/105 (3%) Frame = -1 Query: 622 LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLE 443 L GP E+H MFP + N QV+S S L+ R WER Sbjct: 179 LERFGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACASAVSAART 238 Query: 442 GRAERKCIVDLPGG----PLEIEWREDNNHVYMTGPAEAVFYGSI 320 GR RK +D+ PL I+WRED NHV MTGPAE + GS+ Sbjct: 239 GRTGRKVTIDVASSPVRVPLTIDWRED-NHVVMTGPAEWEWSGSV 282
>DAPF_OCEIH (Q8ENX2) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 73.2 bits (178), Expect = 7e-13 Identities = 42/112 (37%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V VDD++ L +GP E FP N EF++V+S + L RVWER Sbjct: 169 VFFVDDIEKAPLETLGPTIEKDMRFPESINVEFIEVVSPTELNFRVWERGSGITQACGTG 228 Query: 475 XXXXXXXXVLEGRAERK--CIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 L + + +V L GG L IEW+ED NHV+MTGPAE + G Sbjct: 229 ACAAVVAATLNEKVTKSHPIVVHLAGGDLNIEWKED-NHVWMTGPAEVIATG 279
>DAPF_CAUCR (Q9A280) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 288 Score = 71.6 bits (174), Expect = 2e-12 Identities = 34/97 (35%), Positives = 45/97 (46%) Frame = -1 Query: 610 GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAE 431 G EHH +FP N F + SR H++++VWER V G + Sbjct: 186 GSLVEHHPLFPEGVNVGFAHIASRDHIRLKVWERGAGLTQACGTGACAAQVAAVRRGLTD 245 Query: 430 RKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 RK V+ G L IEWRE + HV MTGP + G + Sbjct: 246 RKARVEFDTGSLTIEWRESDGHVIMTGPITMEYAGKL 282
>DAPF_THETN (Q8R9S4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 70.5 bits (171), Expect = 4e-12 Identities = 36/111 (32%), Positives = 53/111 (47%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 L V ++ + ++GPK E +FP TN +FV+V ++ +R WER Sbjct: 163 LFVSSFEESFMKELGPKIEKSSLFPEGTNVDFVKVEDEENISVRTWERGVGLTLACGSGA 222 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 L GR R V G L +EW+EDN+ +Y++G E VF G I Sbjct: 223 SASAVVSSLLGRTRRSVNVHFKAGVLLVEWKEDNS-IYLSGEVEEVFRGEI 272
>DAPF_BACSU (O32114) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 67.0 bits (162), Expect = 5e-11 Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Frame = -1 Query: 646 VLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXX 467 + ++ L+ +GP E FP N EFV+ ++ L RVWER Sbjct: 173 IADIEQAPLTTLGPVIEKDPRFPEGINVEFVETVNEQELHFRVWERGSGITQACGTGACA 232 Query: 466 XXXXXVLEGRAERK--CIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 VL G ++R V L GG L I W+ DN HV MTGPAE V G Sbjct: 233 AAVASVLNGVSKRNQDITVHLAGGDLVINWK-DNGHVMMTGPAETVCEG 280
>DAPF_BACHD (Q9K7F0) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 67.0 bits (162), Expect = 5e-11 Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Frame = -1 Query: 637 VDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXX 458 ++D + +GP E HE FP N EFVQV+S + + RVWER Sbjct: 174 IEDAPVEQVGPLLEKHEAFPDWVNVEFVQVVSPTEIHFRVWERGSGITQACGTGACAAVV 233 Query: 457 XXVLEGRAER--KCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSIV 317 VL G ++ + V L GG L I W E N V MTG AE + G+ V Sbjct: 234 ASVLNGFTQKGQEVTVHLLGGDLTISWLE-NGDVLMTGAAETICEGTYV 281
>DAPF_XANAC (Q8PPQ1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 64.7 bits (156), Expect = 2e-10 Identities = 36/109 (33%), Positives = 50/109 (45%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 ++V +VD + +G + + FP N F QV+ H+++RV+ER Sbjct: 172 VEVGRVDAAPVERVGALLQQNAAFPDSVNVGFAQVVDPVHVRLRVFERGVGETLACGSGA 231 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 + GR ER V LPGG L I W D V M+GPA VF G Sbjct: 232 CAAAAVLMQRGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVFVFDG 280
>DAPF_XANCP (Q8P548) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 63.9 bits (154), Expect = 4e-10 Identities = 35/109 (32%), Positives = 51/109 (46%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 ++V +VD + +G + + FP N F QV+ +H+++RV+ER Sbjct: 172 VEVGRVDAAPVERVGALLQQNAAFPESVNVGFAQVVDPAHVRLRVYERGVGETLACGSGA 231 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 + GR ER V LPGG L I W + V M+GPA VF G Sbjct: 232 CAAAVVLMHRGRVERDVRVSLPGGELRIRWAGEQAQVVMSGPAVFVFDG 280
>DAPF_XYLFT (Q87DI4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 62.8 bits (151), Expect = 9e-10 Identities = 33/104 (31%), Positives = 46/104 (44%) Frame = -1 Query: 637 VDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXX 458 +D + IGP + H FP N FVQV+ +++RV+ER Sbjct: 177 IDVAPVERIGPLLQQHSAFPESVNVSFVQVIDPGLVRLRVYERGAGETLACGSGACAAAV 236 Query: 457 XXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 + GR R V LPGG L ++W V ++GPA VF G Sbjct: 237 VLMQRGRVGRDVRVVLPGGTLRVQWPVSGGPVTLSGPARCVFDG 280
>DAPF_METJA (Q58519) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 295 Score = 62.8 bits (151), Expect = 9e-10 Identities = 33/103 (32%), Positives = 49/103 (47%) Frame = -1 Query: 622 LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLE 443 L IG + EHHE FP R N FV+VL+ + +++ WER Sbjct: 192 LDVIGKEIEHHEAFPERINVHFVKVLNPNEIRIVTWERGAGYTTACGTGTTASVIMAHKL 251 Query: 442 GRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSIVH 314 G+ + + L GG LEIE ++D VYM G A V+ +++ Sbjct: 252 GKTNNRVLAHLDGGDLEIEIKDDG--VYMIGDAVMVYDAKLIN 292
>DAPF1_ANASP (P54897) Diaminopimelate epimerase 1 (EC 5.1.1.7) (DAP epimerase 1)| Length = 285 Score = 62.0 bits (149), Expect = 2e-09 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 3/112 (2%) Frame = -1 Query: 646 VLQVDDLKLS---DIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+ +DD+ + GP FE + +FP RTN +F++VL RS +++ +WER Sbjct: 162 VILLDDINSEVARNFGPIFEGYPLFPNRTNVQFMKVLDRSTIQIEIWERGAGYTLASGSS 221 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 G + K IV +PGG + I+ ++D H+ MT + G + Sbjct: 222 SSAAAATAHKLGLCDSKIIVKMPGGDILIQIKDD-FHISMTDSVTKLAQGEL 272
>DAPF_NEIMB (Q9K060) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 283 Score = 61.6 bits (148), Expect = 2e-09 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 5/116 (4%) Frame = -1 Query: 646 VLQVDDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+ VDD++ + + G E H FP R N F+QV+ R+ +++RV+ER Sbjct: 168 VIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQVVGRTAIRLRVFERGVGETQACGTG 227 Query: 475 XXXXXXXXVLEGRAERKCIVD--LPGGPLEIEWREDNNHVYMTGPAEAVFYGSIVH 314 + G + V+ LPGG L IEW V MTGPAEAVF G + + Sbjct: 228 ACAAVVAGIRLGLLDEGKTVEVVLPGGTLYIEW-ACGGDVMMTGPAEAVFEGELAY 282
>DAPF_NEIMA (Q9JV69) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 283 Score = 61.6 bits (148), Expect = 2e-09 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 5/116 (4%) Frame = -1 Query: 646 VLQVDDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 V+ VDD++ + + G E H FP R N F+Q++SR+ +++RV+ER Sbjct: 168 VIVVDDVECAQVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGVGETQACGTG 227 Query: 475 XXXXXXXXVLEGRAERKCIVD--LPGGPLEIEWREDNNHVYMTGPAEAVFYGSIVH 314 + G + V+ LPGG L IEW V MTGPAE VF G + + Sbjct: 228 ACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEW-ACGGDVMMTGPAETVFEGELAY 282
>DAPF_METTH (O27389) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 59.3 bits (142), Expect = 1e-08 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 5/115 (4%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 ++ VDD + L +GP E+H +FP R N FV+V+S S + M WER Sbjct: 169 IIFVDDAEGVDLDRLGPAIENHPLFPERINVHFVEVVSPSEIIMVTWERGAGPTMACGTG 228 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHV--YMTGPAEAVFYGSIV 317 V + + +V LPGG L+I+ +D + YM G A VF G ++ Sbjct: 229 ATASVIAGVKLEKLDDSVLVHLPGGELKIDVYQDGTELGAYMEGDAVMVFDGILL 283
>DAPF_RALSO (Q8Y344) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 292 Score = 58.5 bits (140), Expect = 2e-08 Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 3/109 (2%) Frame = -1 Query: 637 VDDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXX 467 VDD + + GP E H +FP R N F+++ R +++RV+ER Sbjct: 173 VDDAEAFPVREDGPLIESHAVFPRRVNAGFMEIADRHAIRLRVYERGAGETLACGTGACA 232 Query: 466 XXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + G + V GG L I W + V MTGPA VF G++ Sbjct: 233 AAVAGIRRGLLDSPVKVTTHGGDLTIAWAGEGEPVMMTGPATTVFEGTL 281
>DAPF_XYLFA (Q9PD98) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 58.5 bits (140), Expect = 2e-08 Identities = 32/104 (30%), Positives = 46/104 (44%) Frame = -1 Query: 637 VDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXX 458 +D + IG + H FP N FVQV+ +++RV+ER Sbjct: 177 IDVAPVERIGSLLQQHVAFPESVNVGFVQVIDPGLVRLRVYERGAGETLACGSGACAAAV 236 Query: 457 XXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 + GR R V LPGG L ++W V ++GPA+ VF G Sbjct: 237 VLMQRGRVGRDVRVVLPGGTLRVQWPVSGGPVTLSGPAKCVFDG 280
>DAPF_BUCAI (P57649) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 58.2 bits (139), Expect = 2e-08 Identities = 32/111 (28%), Positives = 53/111 (47%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 +KV V + ++ IG E + +FP N F+++L++ H+K+RV+ER Sbjct: 172 IKVQSVKNAPVNIIGDSIEKNPIFPEGVNVSFMEILNKKHIKLRVYERNVGETKACGSAA 231 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + + V+L GG L I W+ +YM GPA+ V+ G I Sbjct: 232 CAAVAVGIAQKLLSDTVHVELLGGKLIIIWKGFGTPLYMVGPAKHVYDGYI 282
>DAPF_RHILO (Q98EB6) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 294 Score = 57.4 bits (137), Expect = 4e-08 Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Frame = -1 Query: 625 KLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVL 446 +L GP E+H +FP R N QV S + +R WER Sbjct: 178 ELERFGPLLENHPIFPERANITIAQVTSPESMIIRTWERGAGLTKACGSAACASVVAAAR 237 Query: 445 EGRAERKCIVDLP-GGPLEIEWREDNNHVYMTGPAEAVFYGS 323 R R + P GG L +EW DN+HV +TG AE F GS Sbjct: 238 TRRTGRSVNLLTPGGGTLHVEWL-DNDHVILTGAAEWEFSGS 278
>DAPF_BUCBP (P59582) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 56.2 bits (134), Expect = 8e-08 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Frame = -1 Query: 646 VLQVDDLK---LSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXX 476 ++ V++LK + IG H++FP N FV+VLS++ + +RV+ER Sbjct: 173 IIYVNNLKKYPVKKIGFYLSTHKIFPEGINVNFVEVLSKNEIALRVYERGVGETLACGSG 232 Query: 475 XXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 + +G + V+L G L+I W+ + +YMTGPA V+ G Sbjct: 233 ACASVALGIQQGLLFNEVQVNLLNGILKINWKGGSEKLYMTGPAVHVYDG 282
>DAPF_BUCAP (Q8K901) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 52.4 bits (124), Expect = 1e-06 Identities = 30/111 (27%), Positives = 54/111 (48%) Frame = -1 Query: 652 LKVLQVDDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXX 473 +KV +++ + IG E + +FP N F++V++++H+++RV+ER Sbjct: 172 IKVESINNAPVKKIGELLEKNSIFPQGINVGFMKVINKNHIQLRVYERDVGETQSCGSGA 231 Query: 472 XXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 + + VDL GG L I+W+ N +YM G A ++ G I Sbjct: 232 CAAVAVGIAKNLLCDNVKVDLLGGNLIIKWKGFNYPLYMIGTACHIYDGYI 282
>DAPF_CLOPE (Q46185) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 272 Score = 45.4 bits (106), Expect = 1e-04 Identities = 26/98 (26%), Positives = 44/98 (44%) Frame = -1 Query: 616 DIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGR 437 + G E +E+FP TN F +V+ R+ +++R WER G Sbjct: 174 ECGRDIEKYELFPQGTNVNFCKVIDRNTMEVRTWERGAGPTLACGTGNCASVIAANKLGL 233 Query: 436 AERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGS 323 +++ V +PGG L++ +D V M G A + G+ Sbjct: 234 VDKEVKVIVPGGELKVNIEDDG--VKMIGNASFICDGT 269
>DAPF_AQUAE (O67693) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 279 Score = 42.7 bits (99), Expect = 0.001 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 4/118 (3%) Frame = -1 Query: 646 VLQVDDLKLSDIGPKFEHHEMF-PARTNTEFVQVLSRSHLKMRVWERXXXXXXXX-XXXX 473 V V+ + + +G HE F P TN FVQ +S +K+R +ER Sbjct: 160 VEDVEKVNVIKLGRAIRFHEEFQPKGTNVNFVQPVSEDTIKVRTYERGVESETLACGTGA 219 Query: 472 XXXXXXXVLEGRAERK--CIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSIVH*VL 305 L+G ++K ++ G L I++ ED V++TG VF G + VL Sbjct: 220 TACAIVSYLKGLVKKKPVNVLTRSGEVLTIDFSEDLKEVFLTGSVYKVFEGRLSEEVL 277
>DAPF_CORGL (Q8NP73) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 277 Score = 38.9 bits (89), Expect = 0.014 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Frame = -1 Query: 607 PKFEHHEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLE-GRAE 431 P F+ E FP N E V L + MRVWER + + G E Sbjct: 182 PTFDQ-EFFPHGVNVEIVTELEDDAVSMRVWERGVGETRSCGTGTVAAACAALADAGLGE 240 Query: 430 RKCIVDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 V +PGG +E++ +D + +TGP+ + G + Sbjct: 241 GTVKVCVPGGEVEVQIFDDGS--TLTGPSAIIALGEV 275
>DAPF_WIGBR (Q8D2T4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 38.5 bits (88), Expect = 0.018 Identities = 19/91 (20%), Positives = 38/91 (41%) Frame = -1 Query: 592 HEMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVD 413 + +FP + N + +L +K++V+ER + + +K V+ Sbjct: 184 NNIFPNKINISIMNILDFDLIKLKVYERGSGETQSCGSAAAAAAAVAIYYKKLNKKIKVN 243 Query: 412 LPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 G L + W + N + + GPA ++ G I Sbjct: 244 FSRGNLYVYWEKIGNFMSIIGPANHIYDGKI 274
>DAPF_CHLTE (Q8KAX9) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 257 Score = 37.4 bits (85), Expect = 0.040 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 4/113 (3%) Frame = -1 Query: 646 VLQVDDLKLSDIGPKFEHH-EMFPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXX 470 V +D L + G H+ E+FP TN F+++ + L +R +ER Sbjct: 143 VNNLDQLDVLTEGGNIRHNKELFPDGTNVNFLEITAPDALSIRTFERGVEDETLACGTGT 202 Query: 469 XXXXXXVLEGRAERKCIVDLP---GGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 +V + G L + + E + +Y+ GPA AV+ G+I Sbjct: 203 VAAALMSFRLGKVTSSLVRVKVKSGETLMVGFNEMMDEIYLEGPARAVYRGTI 255
>DAPF_CHLPN (Q9Z833) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 257 Score = 36.6 bits (83), Expect = 0.069 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = -1 Query: 640 QVDDLKLSDIGPKFEHHEMF-PARTNTEFVQVLSRSHLKMRVWER 509 ++ L LS +GP +H+ F P N FVQ+L L++R +ER Sbjct: 154 EISTLDLSILGPFLRYHQTFSPDGVNVNFVQILGHCQLRVRTYER 198
>DAPF_COREF (Q8FPE1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 283 Score = 33.9 bits (76), Expect = 0.45 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Frame = -1 Query: 583 FPARTNTEFVQVLSRS----HLKMRVWERXXXXXXXXXXXXXXXXXXXVLE-GRAERKCI 419 FP N E V L+ + MRVWER + + G+A Sbjct: 191 FPRGVNVELVTELADGLDDPAIHMRVWERGVGETRSCGTGTVAAARAALADAGQAVGTVT 250 Query: 418 VDLPGGPLEIEWREDNNHVYMTGPAEAVFYGSI 320 V +PGG +E+ RE+ + +TGP+ + G++ Sbjct: 251 VYVPGGAVEVGIREETS--TLTGPSRIIATGTV 281
>DAPF_LEIXX (Q6AE05) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 292 Score = 33.5 bits (75), Expect = 0.58 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%) Frame = -1 Query: 418 VDLPGGPLEIEW--REDNNHVYMTGPAEAVFYGSI 320 VD+PGG + + ED HV ++GPAE V+ G++ Sbjct: 255 VDVPGGTVGVRMFPTEDGEHVALSGPAELVYTGAL 289
>DAPF_STRCO (O69969) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 289 Score = 31.2 bits (69), Expect = 2.9 Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 7/93 (7%) Frame = -1 Query: 583 FPARTNTEFVQVLSRSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKC------ 422 +P N EFV H+ MRV ER + Sbjct: 186 YPDGVNVEFVVDRGPRHVAMRVHERGSGETRSCGTGACAVAVATARRDGLDPAATGTPAT 245 Query: 421 -IVDLPGGPLEIEWREDNNHVYMTGPAEAVFYG 326 VD+PGG L I R D + MTGPA V G Sbjct: 246 YTVDVPGGTLVITERPD-GEIEMTGPAVIVAEG 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,286,351 Number of Sequences: 219361 Number of extensions: 1680246 Number of successful extensions: 3960 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 3862 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3927 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
