ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags17a16 |
|---|---|
| Clone Library Name | barley_pub |
>AROK_ARATH (Q9SJ05) Probable shikimate kinase, chloroplast precursor (EC| 2.7.1.71) Length = 292 Score = 149 bits (376), Expect = 7e-36 Identities = 72/121 (59%), Positives = 95/121 (78%) Frame = -2 Query: 622 SSMHRLVVATGGGAVIRPVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQPSAD 443 SS +++VV+TGGGAVIRP+NW+YM KG+SI LDVPL+ALA RIA VGT SRPLL S D Sbjct: 170 SSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGD 229 Query: 442 PYTAAFTKLSLLAEQRGDAYANADVRVSLEELAAKKGHDDVSQLTPTDIAVEALQKIKNF 263 Y+ AF +LS + ++RG+AY NA+ RVSLE +AAK+G+ +VS LTPT+IA+E Q + Sbjct: 230 AYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEVSQVLSQL 289 Query: 262 V 260 + Sbjct: 290 L 290
>AROK_LYCES (Q00497) Shikimate kinase, chloroplast precursor (EC 2.7.1.71)| Length = 300 Score = 138 bits (347), Expect = 2e-32 Identities = 69/121 (57%), Positives = 88/121 (72%) Frame = -2 Query: 622 SSMHRLVVATGGGAVIRPVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQPSAD 443 S MHRLVV+TGGGAV+RP+NWR+M KG+S+ LDVPL+ALAKRI GT SRPLL + S D Sbjct: 172 SLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESGD 231 Query: 442 PYTAAFTKLSLLAEQRGDAYANADVRVSLEELAAKKGHDDVSQLTPTDIAVEALQKIKNF 263 Y +L+ L E RG+ YANA RVSLE +A K+ DV +TP +I +E L +I+NF Sbjct: 232 VYDTTLKRLTTLMETRGENYANASARVSLENIALKR-EKDVCHITPAEITLEVLIQIENF 290 Query: 262 V 260 + Sbjct: 291 L 291
>AROK_ANASP (Q8YXG9) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 181 Score = 64.7 bits (156), Expect = 2e-10 Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 2/124 (1%) Frame = -2 Query: 619 SMHRLVVATGGGAVIRPVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLL--DQPSA 446 S +L VATGGG V+R NW Y+ GL + LDVP+D L R+A +RPLL D P Sbjct: 75 SYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLA--ADTTRPLLQDDDPKG 132 Query: 445 DPYTAAFTKLSLLAEQRGDAYANADVRVSLEELAAKKGHDDVSQLTPTDIAVEALQKIKN 266 KL L EQR Y+ AD+R+ + ++ TP IA + +Q I + Sbjct: 133 --------KLRSLLEQRTPLYSQADLRICVN-----------AEETPEQIANKVMQAIPS 173 Query: 265 FVTE 254 + + Sbjct: 174 VLKQ 177
>AROK_SYNEL (Q8DKH7) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 183 Score = 64.3 bits (155), Expect = 3e-10 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 2/93 (2%) Frame = -2 Query: 622 SSMHRLVVATGGGAVIRPVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQPSAD 443 SS H LVVATGGG V+ P+NW Y+ G+ + L VPL L +R+ Q RPLL + + Sbjct: 76 SSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPLAVLCQRLRQ--DRERPLLQEQPLE 133 Query: 442 PYTAAFTKLSLLAEQRGDAYANAD--VRVSLEE 350 +L L + R YA AD +R++LE+ Sbjct: 134 ------ERLGELLQARQHLYAQADLELRITLED 160
>AROK_SYNY3 (P72796) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 189 Score = 55.5 bits (132), Expect = 1e-07 Identities = 35/86 (40%), Positives = 46/86 (53%) Frame = -2 Query: 610 RLVVATGGGAVIRPVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQPSADPYTA 431 R V+ATGGG V+R NW Y+ GL I LD L+ L R+ G +RPLL + + Sbjct: 83 RSVIATGGGVVLRRQNWSYLHHGLVIWLDGSLELLLARLQ--GDEARPLLQVENLE---- 136 Query: 430 AFTKLSLLAEQRGDAYANADVRVSLE 353 +L L QR YA AD+R L+ Sbjct: 137 --ERLGNLLAQRQPLYAQADLRFPLQ 160
>AROKB_THEMA (Q9WYI3) Bifunctional shikimate kinase/3-dehydroquinate synthase| [Includes: Shikimate kinase (EC 2.7.1.71) (SK); 3-dehydroquinate synthase (EC 4.2.3.4)] Length = 492 Score = 39.7 bits (91), Expect = 0.007 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQ 455 +VVATGGG V+ P N +KK ++ L P + L +R+ T +RPLL + Sbjct: 72 VVVATGGGVVVDPENRELLKKEKTLFLYAPPEVLMERVT---TENRPLLSE 119
>AROK_ACIAD (Q6F7E4) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 180 Score = 35.0 bits (79), Expect = 0.18 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = -2 Query: 622 SSMHRLVVATGGGAVIRPVNWRYMK-KGLSIMLDVPLDALAKRIAQVGTASRPLL 461 +S LV+ATGGG V +P N Y+K +G+ + L P++ +R + +RPLL Sbjct: 76 TSRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTPVELQLQRTYR--DKNRPLL 128
>AROL_SALTY (P63603) Shikimate kinase 2 (EC 2.7.1.71) (Shikimate kinase II)| (SKII) Length = 181 Score = 33.1 bits (74), Expect = 0.68 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = -2 Query: 604 VVATGGGAVIRPVNWRYMKK-GLSIMLDVPLDALAKRI-AQVGTASRPLL 461 VVATGGG ++ N RYM + G+ I L P+ L R+ A+ RP L Sbjct: 74 VVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEAEPEADLRPTL 123
>AROL_SALTI (P63604) Shikimate kinase 2 (EC 2.7.1.71) (Shikimate kinase II)| (SKII) Length = 181 Score = 33.1 bits (74), Expect = 0.68 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = -2 Query: 604 VVATGGGAVIRPVNWRYMKK-GLSIMLDVPLDALAKRI-AQVGTASRPLL 461 VVATGGG ++ N RYM + G+ I L P+ L R+ A+ RP L Sbjct: 74 VVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEAEPEADLRPTL 123
>AROK_HAEIN (P43880) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 180 Score = 32.7 bits (73), Expect = 0.89 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Frame = -2 Query: 622 SSMHRLVVATGGGAVIRPVNWRYMK-KGLSIMLDVPLDALAKRIAQVGTASRPLLDQPSA 446 + M +V++TGGGAV+ N Y+ +G+ I L+ ++ +R + RPLL Q + Sbjct: 71 TQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLL-QDAE 127 Query: 445 DPYTAAFTKLSLLAEQRGDAYAN-ADVRVSLEELAAK 338 +P L LA+ R Y AD+ + +E AK Sbjct: 128 NPRQV----LEDLAKIRNPLYEEIADITLPTDEQNAK 160
>AROK_XYLFT (Q87DU8) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 180 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -2 Query: 604 VVATGGGAVIRPVN-WRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQ 455 ++ATGGG ++ P N R K+G + L + ++ +R+A RPLL Q Sbjct: 77 LIATGGGTILDPENRHRMQKRGFVVFLKINVNTQLERLAH--DRYRPLLQQ 125
>AROL_YERPE (Q8ZC15) Shikimate kinase 2 (EC 2.7.1.71) (Shikimate kinase II)| (SKII) Length = 174 Score = 32.0 bits (71), Expect = 1.5 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = -2 Query: 610 RLVVATGGGAVIRPVNWRYMK-KGLSIMLDVPLDALAKRIAQ-VGTASRPLL 461 + VVATGGGAV+ N +M+ G I L LAKR+A+ A RP L Sbjct: 72 KTVVATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAKRLAEDPEEAQRPSL 123
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 32.0 bits (71), Expect = 1.5 Identities = 17/54 (31%), Positives = 21/54 (38%) Frame = -1 Query: 524 CAFGCTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKG 363 C GC CE + + PS C H G + RGC + C CKG Sbjct: 4539 CEEGCVCEPDYVLSNDKCVPSSECGCKDAH-GVLIPESKTWVSRGCTKNCTCKG 4591
>AROK_XYLFA (Q9PDP4) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 180 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -2 Query: 604 VVATGGGAVIRPVNWRYM-KKGLSIMLDVPLDALAKRIAQVGTASRPLLDQ 455 ++ATGGG ++ P N R M ++G + L + ++ +R+A RPLL Q Sbjct: 77 LIATGGGTILDPENRRCMQERGFVVFLKINVNTQLERLAH--DRYRPLLQQ 125
>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated| protein 10.6) (High sulfur keratin-associated protein 10.6) (Keratin-associated protein 18-6) (Keratin-associated protein 18.6) Length = 365 Score = 31.6 bits (70), Expect = 2.0 Identities = 37/144 (25%), Positives = 49/144 (34%), Gaps = 26/144 (18%) Frame = -1 Query: 611 STSCCYWRWC--CHSTSQLEIYEERSVYHVGCAFGCT----CEANCTSRDCFSAPSRSAI 450 S+SCC C C S+ + E S GC CT +++C C S+P + A Sbjct: 169 SSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPTCCTSSPCQQAC 228 Query: 449 C*SI---------------HSGFHET--QPAR*AKRGCLRKC---RCKGLS*RACSQKGS 330 C + S ++ QPA C C C G S C Q Sbjct: 229 CVPVCCVPVCCVPTCSEDSSSCCQQSSCQPACCTSSPCQHACCVPVCSGASTSCCQQSS- 287 Query: 329 **CLSANPD*YCCRGPAKN*EFCH 258 C A CCR + CH Sbjct: 288 --CQPACCTASCCRSSSSVSLLCH 309
>AROK_VIBCH (Q9KNV1) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 174 Score = 31.2 bits (69), Expect = 2.6 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%) Frame = -2 Query: 607 LVVATGGGAVIRPVNW-RYMKKGLSIMLDVPLDALAKRIAQVG-TASRPLLDQPSADPYT 434 +V+ATGGG+VI N R +G+ + L+ ++ K++A+ RPLL Sbjct: 76 IVLATGGGSVISKENRNRLSARGIVVYLETTIE---KQLARTNRDKKRPLLQTDCPREV- 131 Query: 433 AAFTKLSLLAEQRGDAYAN-ADVRVSLEELAAK 338 L LAE R Y AD+ V ++ +AK Sbjct: 132 -----LEQLAEDRNPLYEEIADITVRTDDQSAK 159
>AROK_PASMU (P57925) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 175 Score = 31.2 bits (69), Expect = 2.6 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMK-KGLSIMLDVPLDALAKRIAQVGTASRPLLDQPSADPYTA 431 +V++TGGGAV+ N ++ +G+ I L+ ++ +R + RPLL Q DP Sbjct: 76 IVLSTGGGAVLSKENRNHLSARGIVIYLETTVEKQYQRTQR--DKKRPLL-QEVEDPRQV 132 Query: 430 AFTKLSLLAEQRGDAYAN-ADVRVSLEELAAK 338 L LA+ R Y AD+ + +E +AK Sbjct: 133 ----LEDLAKIRNPLYEEIADITLPTDEQSAK 160
>END4_THEVO (Q97A09) Probable endonuclease 4 (EC 3.1.21.2) (Endonuclease IV)| (Endodeoxyribonuclease IV) Length = 280 Score = 31.2 bits (69), Expect = 2.6 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%) Frame = +2 Query: 95 KE*INKVERYKVKIQGTNKLGPKFYKGCIQPEVASFVPGTNL*VG-------EWATGHGM 253 KE I KVE +KVK+ N G G E+ + G + VG WA G+ Sbjct: 132 KEAIEKVETHKVKLLVENTAGQGNVIGSTIYEIGQIIDGFDSSVGVCIDTCHAWAAGYD- 190 Query: 254 LSDKILNFLQGLDSNI 301 +++K F+ LDS I Sbjct: 191 ITNKYDEFIDELDSAI 206
>AROK_PSEAE (P34003) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 172 Score = 30.8 bits (68), Expect = 3.4 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMKKGLSIM-LDVPLDALAKRIAQVGTASRPLLDQPS 449 +V+ATGGGAV+R N + ++ G ++ L ++ R A+ +RPLL +P+ Sbjct: 73 MVIATGGGAVMRDGNRQVLRAGGRVVYLHASVEHQIARTAR--DRNRPLLQKPN 124
>SYK_HAEDU (Q7VLU5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 498 Score = 30.4 bits (67), Expect = 4.4 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%) Frame = -2 Query: 529 LDVPLDALAKR--IAQVGTASRPLLDQPSADPYTAAFTKLSLLAEQRGDAYANADVRVS- 359 LD+ + LA+R +A++ P ++ D Y A+ + AE GDA +ADV+V Sbjct: 7 LDLNGEMLARREKLAKIRAMGNPFPNRFRRDAY--AYALQAEYAEMAGDALKDADVQVKV 64 Query: 358 LEELAAKKGHDDVSQLTPTDIAVEALQKIKNFVTEHSMASGPFAD 224 + + K+ S T D++ +I+ +V ++A G + D Sbjct: 65 VGRIMLKRVMGKASFFTIQDVS----GQIQLYVARDNLAEGVYVD 105
>NJMU_HUMAN (Q9HAS0) Protein Njmu-R1| Length = 366 Score = 30.4 bits (67), Expect = 4.4 Identities = 22/88 (25%), Positives = 38/88 (43%) Frame = -2 Query: 484 GTASRPLLDQPSADPYTAAFTKLSLLAEQRGDAYANADVRVSLEELAAKKGHDDVSQLTP 305 G+A L+ PS+ Y + S LA+QRGD+ + + E G D L Sbjct: 23 GSAEERRLEPPSSSHYCLYSYRGSRLAQQRGDSEDGSPSGTNAE---TPSGDDFSLSLAD 79 Query: 304 TDIAVEALQKIKNFVTEHSMASGPFADL 221 T++ E ++++F+ + F L Sbjct: 80 TNLPSEVEPELRSFIAKRLSRGAVFEGL 107
>AROK_LACLC (P43906) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 162 Score = 30.4 bits (67), Expect = 4.4 Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 2/113 (1%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMKKGLSIM-LDVPLDALAKRIAQVGTASRPLLDQPSADPYTA 431 +++ATGGG + P N + + ++ L D L KRI+ RPL A Sbjct: 67 IIIATGGGIIENPKNLNVLDRASRVVFLTADFDTLWKRISMDWQNVRPLAQDKEA----- 121 Query: 430 AFTKLSLLAEQRGDAYA-NADVRVSLEELAAKKGHDDVSQLTPTDIAVEALQK 275 LL E+R Y+ AD+ + DV+ +P IA + +K Sbjct: 122 ----AQLLFEKRMKDYSLVADLTI------------DVTDKSPEQIAEQIREK 158
>TYDP_CAEEL (Q9TXV7) Probable tyrosyl-DNA phosphodiesterase (EC 3.1.4.-)| (Tyr-DNA phosphodiesterase) Length = 451 Score = 30.4 bits (67), Expect = 4.4 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -1 Query: 221 INWFRGQRMQPQAECNPCRISAPICLYLV 135 INWFRGQ +Q NP P +YLV Sbjct: 275 INWFRGQFLQSLEGANPSPKQKPAKMYLV 303
>MT2B_PIG (P79380) Metallothionein-2B (MT-2B) (Metallothionein-IIB) (MT-IIB)| Length = 61 Score = 30.4 bits (67), Expect = 4.4 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -1 Query: 524 CAFG--CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS 357 CA G CTC +C +DC + + C PA A+ C + C CKG S Sbjct: 7 CAAGGSCTCAGSCKCKDCRCTSCKKSCC--------SCCPAGCAR--CAQGCICKGAS 54
>MT1_COLLI (P15786) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 63 Score = 30.4 bits (67), Expect = 4.4 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Frame = -1 Query: 524 CAFG--CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS*R 351 CA G CTC NC ++C C S G PA AK C + C CKG Sbjct: 8 CAAGGTCTCGDNCKCKNC--------KCTSCKKGCCSCCPAGCAK--CAQGCVCKGPPSA 57 Query: 350 ACS 342 CS Sbjct: 58 KCS 60
>MT2_SHEEP (P68302) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 30.0 bits (66), Expect = 5.8 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = -1 Query: 512 CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS 357 CTC +C +DC A + + C P AK C + C CKG S Sbjct: 13 CTCAGSCKCKDCKCASCKKSCC--------SCCPVGCAK--CAQGCVCKGAS 54
>MT2_BOVIN (P68301) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 30.0 bits (66), Expect = 5.8 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = -1 Query: 512 CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS 357 CTC +C +DC A + + C P AK C + C CKG S Sbjct: 13 CTCAGSCKCKDCKCASCKKSCC--------SCCPVGCAK--CAQGCVCKGAS 54
>MT2H_BOVIN (P55943) Metallothionein-II, hippocampal (MT-2)| Length = 61 Score = 30.0 bits (66), Expect = 5.8 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -1 Query: 524 CAFG--CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS 357 CA G CTC +CT + C A + + C P AK C + C CKG S Sbjct: 7 CATGGSCTCANSCTCKACKCASCKKSCC--------SCCPVGCAK--CAQGCICKGAS 54
>MT2A_PIG (P79379) Metallothionein-2A (MT-2A) (Metallothionein-IIA) (MT-IIA)| Length = 61 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Frame = -1 Query: 524 CAFG--CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS 357 CA G CTC +C +DC + + C P AK C + C CKG S Sbjct: 7 CAAGGSCTCAGSCKCKDCKCTSCKKSCC--------SCCPVGCAK--CAQGCICKGAS 54
>CUL2_CAEEL (Q17390) Cullin-2| Length = 776 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/62 (29%), Positives = 26/62 (41%) Frame = +2 Query: 377 ICVSIPSLLSEQAEFRESRCVWISRWLI*KGPRSSPDLCNSLRKCIQRHIQHDRQTFLHI 556 ICVSIP+ LSE+ L N ++ CIQ H++ RQ + + Sbjct: 46 ICVSIPTPLSER-------------------------LYNEVKACIQEHVRQKRQDIVDV 80 Query: 557 SP 562 P Sbjct: 81 DP 82
>AROK_NEIGO (O50467) Shikimate kinase (EC 2.7.1.71) (SK) (Fragment)| Length = 134 Score = 29.6 bits (65), Expect = 7.6 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMKK-GLSIMLDVPLDALAKRIAQVGTASRPLLDQPSADP 440 +V++TGGGAV++ N ++K G + L P + L +R SRPLL ADP Sbjct: 41 IVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTR--CDNSRPLLQ--VADP 93
>UVRC_CHLTE (Q8KBI0) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 626 Score = 29.6 bits (65), Expect = 7.6 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQPSADPYTAA 428 LV+ GG + V W+ +++ + LD+P+ LAKR+ ++ + P DPY Sbjct: 487 LVLIDGGKGQVN-VAWQVLQE---LGLDLPVAGLAKRLEEIYVPNEP-------DPYNLP 535 Query: 427 FTK--LSLLAEQRGDAY 383 T L LL + R +A+ Sbjct: 536 KTSPALKLLQQLRDEAH 552
>AROK_NEIMB (P63600) Putative shikimate kinase (EC 2.7.1.71)| Length = 170 Score = 29.6 bits (65), Expect = 7.6 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMKK-GLSIMLDVPLDALAKRIAQVGTASRPLLDQPSADP 440 +V++TGGGAV++ N ++K G + L P + L +R SRPLL ADP Sbjct: 77 IVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTR--CDNSRPLLQ--VADP 129
>AROK_NEIMA (P63599) Putative shikimate kinase (EC 2.7.1.71)| Length = 170 Score = 29.6 bits (65), Expect = 7.6 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMKK-GLSIMLDVPLDALAKRIAQVGTASRPLLDQPSADP 440 +V++TGGGAV++ N ++K G + L P + L +R SRPLL ADP Sbjct: 77 IVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTR--CDNSRPLLQ--VADP 129
>KR107_HUMAN (P60409) Keratin-associated protein 10-7 (Keratin-associated| protein 10.7) (High sulfur keratin-associated protein 10.7) (Keratin-associated protein 18-7) (Keratin-associated protein 18.7) Length = 370 Score = 29.6 bits (65), Expect = 7.6 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 6/61 (9%) Frame = -1 Query: 611 STSCCYWRWC--CHSTSQLEIYEERSVYHVGCAFGCT----CEANCTSRDCFSAPSRSAI 450 S+SCC C C S+ + E S GC CT +++C C S+P + A Sbjct: 169 SSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCKPACCTSSPCQQAC 228 Query: 449 C 447 C Sbjct: 229 C 229
>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated| protein 10.11) (High sulfur keratin-associated protein 10.11) (Keratin-associated protein 18-11) (Keratin-associated protein 18.11) Length = 298 Score = 29.6 bits (65), Expect = 7.6 Identities = 22/61 (36%), Positives = 24/61 (39%) Frame = -1 Query: 611 STSCCYWRWCCHSTSQLEIYEERSVYHVGCAFGCTCEANCTSRDCFSAPSRSAIC*SIHS 432 ST C CC TS C C C A+C S C A SR A C S+ S Sbjct: 247 STCCVPVSSCCAPTSS-------------CQSSCCCPASCVSLLCRPASSRLA-CYSLCS 292 Query: 431 G 429 G Sbjct: 293 G 293
>AROK_LACLA (Q9CEU1) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 162 Score = 29.3 bits (64), Expect = 9.9 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 2/113 (1%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRYMKKGLSIM-LDVPLDALAKRIAQVGTASRPLLDQPSADPYTA 431 +++ATGGG + P N + + ++ L + L +RI+ RPL A Sbjct: 67 IIIATGGGIIENPKNLEALDREAGVVFLTADFETLWERISMDLQNVRPLAQDKKA----- 121 Query: 430 AFTKLSLLAEQRGDAYAN-ADVRVSLEELAAKKGHDDVSQLTPTDIAVEALQK 275 LL E+R + YA AD+ + DV+ +P I E +K Sbjct: 122 ----AQLLFEKRKNDYAKVADLTI------------DVTDKSPEQIVEEIREK 158
>AROL_ERWCH (P10880) Shikimate kinase 2 (EC 2.7.1.71) (Shikimate kinase II)| (SKII) Length = 173 Score = 29.3 bits (64), Expect = 9.9 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = -2 Query: 604 VVATGGGAVIRPVNWRYMK-KGLSIMLDVPLDALAKRI-AQVGTASRP-LLDQPSADPYT 434 VVATGGG V+ N ++M+ G + L P + LA R+ A RP L +P A+ Sbjct: 74 VVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQASPQAHQRPTLTGRPIAEEME 133 Query: 433 AAFTKLSLL 407 A + L Sbjct: 134 AVLREREAL 142
>DNLI_AERPE (Q9YD18) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 602 Score = 29.3 bits (64), Expect = 9.9 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Frame = -2 Query: 607 LVVATGGGAVIRPVNWRY--MKKGLSIMLDVP----LDALAKRIAQVGTASRPLLDQPSA 446 L +A GGGA RPV R ++ L + +V +DAL QVG RP+L + Sbjct: 187 LAMAFGGGAHARPVIERAYNLRADLGYIAEVVAREGVDALRGVKPQVGVPIRPMLAERGR 246 Query: 445 DP 440 DP Sbjct: 247 DP 248
>YG1E_YEAST (P53213) Hypothetical 11.7 kDa protein in VMA7-RPS25A intergenic| region Length = 109 Score = 29.3 bits (64), Expect = 9.9 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -2 Query: 379 NADVRVSLEELAAKKGHDDVSQLTPTDIA--VEALQKIKNFVTEHSMASGPFADL*IGSG 206 N D RVS EEL K+ D + L +A V ++ + + E + G D+ + +G Sbjct: 10 NVDERVSSEELCGKEVKDTEAILGVDKLALLVASVLDVNDSTAESEVMEGAVLDVVLLAG 69 Query: 205 DKGCNLRLNATLV 167 C L+ ++V Sbjct: 70 TNSCERTLSGSVV 82
>MT2B_RABIT (P80289) Metallothionein-2B (MT-2B) (Metallothionein-IIB) (MT-IIB)| Length = 61 Score = 29.3 bits (64), Expect = 9.9 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -1 Query: 524 CAFG--CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS 357 CA G CTC ++C ++C + + C +G + C + C CKG S Sbjct: 7 CATGDSCTCASSCKCKECKCTSCKKSCCSCCPAGCTK----------CAQGCICKGAS 54
>MT1F_PIG (P79378) Metallothionein-1F (MT-1F) (Metallothionein-IF) (MT-IF)| Length = 61 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = -1 Query: 512 CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS 357 CTC +CT + C + + C PA AK C + C CKG S Sbjct: 13 CTCAGSCTCKACRCTSCKKSCC--------SCCPAGCAK--CAQGCICKGAS 54
>MT1A_RABIT (P11957) Metallothionein-1A (MT-1A) (Metallothionein-IA) (MT-IA)| Length = 61 Score = 29.3 bits (64), Expect = 9.9 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -1 Query: 524 CAFG--CTCEANCTSRDCFSAPSRSAIC*SIHSGFHETQPAR*AKRGCLRKCRCKGLS 357 CA G CTC ++C ++C + + C +G + C + C CKG S Sbjct: 7 CATGNSCTCASSCKCKECKCTSCKKSCCSCCPAGCTK----------CAQGCICKGAS 54
>LDH_MYCPU (Q98PG4) L-lactate dehydrogenase (EC 1.1.1.27) (L-LDH)| Length = 315 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -2 Query: 307 PTDIAVEALQKIKNFVTEHSMASGPFAD 224 P DI QK+ NF E M+SG F D Sbjct: 121 PVDILATVFQKVTNFPKEKVMSSGTFLD 148 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,512,227 Number of Sequences: 219361 Number of extensions: 1794150 Number of successful extensions: 5409 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 5186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5398 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
