ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16l14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192684.1| Oryza sativa (japonica cultivar-group), predic... 80 9e-12
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
3dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
4dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
5emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on ch... 46 0.12
6dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 44 0.47
7emb|AL672091.4| Mouse DNA sequence from clone RP23-185L10 on chr... 44 0.47
8gb|BC085096.1| Mus musculus cDNA clone MGC:102640 IMAGE:30731739... 42 1.9
9ref|NM_027285.2| Mus musculus RIKEN cDNA 1700029I01 gene (170002... 42 1.9
10gb|AC122491.3| Mus musculus BAC clone RP24-390D3 from chromosome... 42 1.9
11ref|XM_987785.1| PREDICTED: Mus musculus similar to zinc finger ... 42 1.9
12ref|XM_001006744.1| PREDICTED: Mus musculus similar to reduced e... 42 1.9
13gb|BC066875.1| Mus musculus cDNA clone MGC:76795 IMAGE:30111586,... 42 1.9
14ref|XM_984726.1| PREDICTED: Mus musculus similar to zinc finger ... 42 1.9
15ref|XM_984410.1| PREDICTED: Mus musculus similar to zinc finger ... 42 1.9
16ref|XM_993901.1| PREDICTED: Mus musculus similar to zinc finger ... 42 1.9
17gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, comple... 42 1.9
18gb|AC117210.3| Mus musculus BAC clone RP23-286E20 from 10, compl... 42 1.9
19gb|AC138642.10| Mus musculus chromosome 3, clone RP23-21O7, comp... 42 1.9
20gb|AY357935.1|AY357926S10 Macaca fascicularis bestrophin (VMD2) ... 42 1.9
21gb|AY357925.1| Macaca fascicularis bestrophin (VMD2) mRNA, compl... 42 1.9
22gb|BC108336.1| Mus musculus similar to zinc finger protein 665, ... 42 1.9
23gb|BC085112.1| Mus musculus similar to RIKEN cDNA 1700029I01, mR... 42 1.9
24ref|XM_790515.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.9
25emb|CR788296.8| Mouse DNA sequence from clone RP23-17C23 on chro... 42 1.9
26dbj|AK139880.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 42 1.9
27gb|AY920776.1| Nausithoe rubra large subunit 28S ribosomal RNA g... 42 1.9
28gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome ... 42 1.9
29dbj|AB179420.1| Macaca fascicularis testis cDNA clone: QtsA-1964... 42 1.9
30emb|AL626778.12| Mouse DNA sequence from clone RP23-326E2 on chr... 42 1.9
31gb|AC020893.6| Homo sapiens chromosome 5 clone CTC-250P20, compl... 42 1.9
32gb|BC096621.1| Mus musculus RIKEN cDNA 1700029I01 gene, mRNA (cD... 42 1.9
33ref|XM_347236.2| PREDICTED: Rattus norvegicus SEC23A (S. cerevis... 42 1.9
34ref|NM_001037926.1| Mus musculus similar to zinc finger protein ... 42 1.9
35ref|NM_001014397.1| Mus musculus similar to RIKEN cDNA 1700029I0... 42 1.9
36emb|AL731663.12| Mouse DNA sequence from clone RP23-360J20 on ch... 42 1.9
37emb|AL929465.6| Mouse DNA sequence from clone RP23-395N7 on chro... 42 1.9
38gb|BC024323.1| Mus musculus RIKEN cDNA 1700029I01 gene, mRNA (cD... 42 1.9
39emb|AL954334.4| Mouse DNA sequence from clone RP24-93B5 on chrom... 42 1.9
40emb|AL606987.11| Mouse DNA sequence from clone RP23-383I4 on chr... 42 1.9
41emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on ch... 42 1.9
42emb|AL713973.7| Mouse DNA sequence from clone RP23-60A13 on chro... 42 1.9
43emb|AL606931.6| Mouse DNA sequence from clone RP23-162H3 on chro... 42 1.9
44gb|AC150753.3| Bos taurus BAC CH240-283G19 (Children's Hospital... 40 7.3
45ref|XM_414818.1| PREDICTED: Gallus gallus similar to unconventio... 40 7.3
46emb|BX001006.7| Zebrafish DNA sequence from clone DKEY-148M7 in ... 40 7.3
47emb|AL354868.10| Human DNA sequence from clone RP11-339A7 on chr... 40 7.3
48emb|BX649458.8| Zebrafish DNA sequence from clone DKEY-14P20 in ... 40 7.3
49gb|AC008618.7| Homo sapiens chromosome 5 clone CTB-146E17, compl... 40 7.3
50gb|AC008565.6|AC008565 Homo sapiens chromosome 5 clone CTC-538F1... 40 7.3
51dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
52gb|AF091786.1|AF091786 Oncorhynchus nerka non-classical MHC clas... 40 7.3
53gb|AC153902.4| Mus musculus 6 BAC RP23-5K15 (Roswell Park Cancer... 40 7.3
54emb|BX470104.1| Zebrafish DNA sequence from clone DKEY-148M7, co... 40 7.3
55gb|M19647.1|RATKALA Rat renal kallikrein gene, complete cds, clo... 40 7.3 
>ref|NM_192684.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2505

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                        
Query: 379  tcagctcttctctccttgatgcatcctcggcttcttggaangcggtgtcatgaaaagctt 438
            ||||| ||||||| |  |||| ||||||  |||||| ||| | |||||||||||||||||
Sbjct: 2505 tcagcccttctctgcccgatgtatcctcaacttctttgaaggtggtgtcatgaaaagctt 2446

                                           
Query: 439  tctaacagatgtaacgggatcatcctcctca 469
            ||||||||| ||||| || ||||||||||||
Sbjct: 2445 tctaacagacgtaacagggtcatcctcctca 2415
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                            
Query: 379      tcagctcttctctccttgatgcatcctcggcttcttggaangcggtgtcatgaaaagctt 438
                ||||| ||||||| |  |||| ||||||  |||||| ||| | |||||||||||||||||
Sbjct: 23857324 tcagcccttctctgcccgatgtatcctcaacttctttgaaggtggtgtcatgaaaagctt 23857265

                                             
Query: 439      tctaacagatgtaacgggatcatcctcct 467
                ||||||||| ||||| || ||||||||||
Sbjct: 23857264 tctaacagacgtaacagggtcatcctcct 23857236



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 21       ctacagtttacaggtgctgaacag 44
                |||||||| |||||||||||||||
Sbjct: 42870608 ctacagttgacaggtgctgaacag 42870631
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>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0704D04
          Length = 147638

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 379  tcagctcttctctccttgatgcatcctcggcttcttggaangcggtgtcatgaaaagctt 438
            ||||| ||||||| |  |||| ||||||  |||||| ||| | |||||||||||||||||
Sbjct: 3728 tcagcccttctctgcccgatgtatcctcaacttctttgaaggtggtgtcatgaaaagctt 3669

                                         
Query: 439  tctaacagatgtaacgggatcatcctcct 467
            ||||||||| ||||| || ||||||||||
Sbjct: 3668 tctaacagacgtaacagggtcatcctcct 3640
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>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0681B11
          Length = 144091

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                          
Query: 379    tcagctcttctctccttgatgcatcctcggcttcttggaangcggtgtcatgaaaagctt 438
              ||||| ||||||| |  |||| ||||||  |||||| ||| | |||||||||||||||||
Sbjct: 137909 tcagcccttctctgcccgatgtatcctcaacttctttgaaggtggtgtcatgaaaagctt 137850

                                           
Query: 439    tctaacagatgtaacgggatcatcctcct 467
              ||||||||| ||||| || ||||||||||
Sbjct: 137849 tctaacagacgtaacagggtcatcctcct 137821
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>emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on chromosome 13 Contains the
              gene for a novel protein (FLJ31208), three novel genes, a
              novel pseudogene and three CpG islands, complete sequence
          Length = 178850

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 242    ctgtttccctttttcttgttccc 264
              |||||||||||||||||||||||
Sbjct: 139789 ctgtttccctttttcttgttccc 139767
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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 500    gaaactccatctcctcttttat 521
              ||||||||||||||||||||||
Sbjct: 581911 gaaactccatctcctcttttat 581932
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>emb|AL672091.4| Mouse DNA sequence from clone RP23-185L10 on chromosome X, complete
              sequence
          Length = 206291

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 239    catctgtttccctttttcttgttccc 264
              |||||||||||||| |||||||||||
Sbjct: 188853 catctgtttcccttgttcttgttccc 188828
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>gb|BC085096.1| Mus musculus cDNA clone MGC:102640 IMAGE:30731739, complete cds
          Length = 2875

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2429 ggtgtcatgaaaagctttcta 2409
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>ref|NM_027285.2| Mus musculus RIKEN cDNA 1700029I01 gene (1700029I01Rik), mRNA
          Length = 4593

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2370 ggtgtcatgaaaagctttcta 2350
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>gb|AC122491.3| Mus musculus BAC clone RP24-390D3 from chromosome 3, complete sequence
          Length = 175092

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 422    ggtgtcatgaaaagctttcta 442
              |||||||||||||||||||||
Sbjct: 106636 ggtgtcatgaaaagctttcta 106656
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>ref|XM_987785.1| PREDICTED: Mus musculus similar to zinc finger protein 665
            (LOC671566), mRNA
          Length = 3762

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2108 ggtgtcatgaaaagctttcta 2088
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>ref|XM_001006744.1| PREDICTED: Mus musculus similar to reduced expression 2 (LOC673960),
            mRNA
          Length = 1418

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 1206 ggtgtcatgaaaagctttcta 1186
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>gb|BC066875.1| Mus musculus cDNA clone MGC:76795 IMAGE:30111586, complete cds
          Length = 2891

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2453 ggtgtcatgaaaagctttcta 2433
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>ref|XM_984726.1| PREDICTED: Mus musculus similar to zinc finger protein 665
            (LOC666581), mRNA
          Length = 3672

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2644 ggtgtcatgaaaagctttcta 2624
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>ref|XM_984410.1| PREDICTED: Mus musculus similar to zinc finger protein 665
            (LOC666532), mRNA
          Length = 4391

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2741 ggtgtcatgaaaagctttcta 2721
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>ref|XM_993901.1| PREDICTED: Mus musculus similar to zinc finger protein 665
            (LOC668033), mRNA
          Length = 2832

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2598 ggtgtcatgaaaagctttcta 2578
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>gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, complete sequence
          Length = 209508

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 422    ggtgtcatgaaaagctttcta 442
              |||||||||||||||||||||
Sbjct: 156347 ggtgtcatgaaaagctttcta 156367
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>gb|AC117210.3| Mus musculus BAC clone RP23-286E20 from 10, complete sequence
          Length = 178173

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 422    ggtgtcatgaaaagctttcta 442
              |||||||||||||||||||||
Sbjct: 130654 ggtgtcatgaaaagctttcta 130674
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>gb|AC138642.10| Mus musculus chromosome 3, clone RP23-21O7, complete sequence
          Length = 252108

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 1333 ggtgtcatgaaaagctttcta 1353
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>gb|AY357935.1|AY357926S10 Macaca fascicularis bestrophin (VMD2) gene, exon 10
          Length = 726

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 ctgaaactccatctcctcttt 518
           |||||||||||||||||||||
Sbjct: 63  ctgaaactccatctcctcttt 43
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>gb|AY357925.1| Macaca fascicularis bestrophin (VMD2) mRNA, complete cds
          Length = 2187

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 498  ctgaaactccatctcctcttt 518
            |||||||||||||||||||||
Sbjct: 1194 ctgaaactccatctcctcttt 1174
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>gb|BC108336.1| Mus musculus similar to zinc finger protein 665, mRNA (cDNA clone
            MGC:117846 IMAGE:30462068), complete cds
          Length = 2825

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2591 ggtgtcatgaaaagctttcta 2571
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>gb|BC085112.1| Mus musculus similar to RIKEN cDNA 1700029I01, mRNA (cDNA clone
            MGC:102641 IMAGE:30731985), complete cds
          Length = 2819

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2374 ggtgtcatgaaaagctttcta 2354
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>ref|XM_790515.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4877-PA,
           isoform A (LOC590930), mRNA
          Length = 3363

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 381 agctcttctctccttgatgca 401
           |||||||||||||||||||||
Sbjct: 550 agctcttctctccttgatgca 530
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>emb|CR788296.8| Mouse DNA sequence from clone RP23-17C23 on chromosome 4, complete
           sequence
          Length = 32853

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 422 ggtgtcatgaaaagctttcta 442
           |||||||||||||||||||||
Sbjct: 497 ggtgtcatgaaaagctttcta 477
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>dbj|AK139880.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
            clone:B020031M12 product:hypothetical Zn-finger, C2H2
            type/KRAB box containing protein, full insert sequence
          Length = 2534

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2341 ggtgtcatgaaaagctttcta 2321
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>gb|AY920776.1| Nausithoe rubra large subunit 28S ribosomal RNA gene, partial
           sequence
          Length = 3306

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 234 aactccatctgtttccctttt 254
           |||||||||||||||||||||
Sbjct: 381 aactccatctgtttccctttt 361
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>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   atttctttaatcaccataaca 159
             |||||||||||||||||||||
Sbjct: 13910 atttctttaatcaccataaca 13930
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>dbj|AB179420.1| Macaca fascicularis testis cDNA clone: QtsA-19642, similar to human
            vitelliform macular dystrophy (Best disease,
            bestrophin)(VMD2), mRNA, RefSeq: NM_004183.1
          Length = 2583

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 498  ctgaaactccatctcctcttt 518
            |||||||||||||||||||||
Sbjct: 1591 ctgaaactccatctcctcttt 1571
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>emb|AL626778.12| Mouse DNA sequence from clone RP23-326E2 on chromosome 4, complete
              sequence
          Length = 186208

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 422    ggtgtcatgaaaagctttcta 442
              |||||||||||||||||||||
Sbjct: 123298 ggtgtcatgaaaagctttcta 123278
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>gb|AC020893.6| Homo sapiens chromosome 5 clone CTC-250P20, complete sequence
          Length = 124235

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 130   gtcctccagatttctttaatc 150
             |||||||||||||||||||||
Sbjct: 79325 gtcctccagatttctttaatc 79305
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>gb|BC096621.1| Mus musculus RIKEN cDNA 1700029I01 gene, mRNA (cDNA clone MGC:106059
            IMAGE:30464103), complete cds
          Length = 4593

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2370 ggtgtcatgaaaagctttcta 2350
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>ref|XM_347236.2| PREDICTED: Rattus norvegicus SEC23A (S. cerevisiae) (predicted)
            (Sec23a_predicted), mRNA
          Length = 4034

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 139  atttctttaatcaccataaca 159
            |||||||||||||||||||||
Sbjct: 3126 atttctttaatcaccataaca 3106
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>ref|NM_001037926.1| Mus musculus similar to zinc finger protein 665 (MGC117846), mRNA
          Length = 2825

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2591 ggtgtcatgaaaagctttcta 2571
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>ref|NM_001014397.1| Mus musculus similar to RIKEN cDNA 1700029I01 (LOC433804), mRNA
          Length = 2819

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2374 ggtgtcatgaaaagctttcta 2354
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>emb|AL731663.12| Mouse DNA sequence from clone RP23-360J20 on chromosome 4, complete
             sequence
          Length = 181033

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   ggtgtcatgaaaagctttcta 442
             |||||||||||||||||||||
Sbjct: 73242 ggtgtcatgaaaagctttcta 73222
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>emb|AL929465.6| Mouse DNA sequence from clone RP23-395N7 on chromosome 4, complete
              sequence
          Length = 197037

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 422    ggtgtcatgaaaagctttcta 442
              |||||||||||||||||||||
Sbjct: 126832 ggtgtcatgaaaagctttcta 126812
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>gb|BC024323.1| Mus musculus RIKEN cDNA 1700029I01 gene, mRNA (cDNA clone MGC:19361
            IMAGE:4242170), complete cds
          Length = 2812

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 2586 ggtgtcatgaaaagctttcta 2566
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>emb|AL954334.4| Mouse DNA sequence from clone RP24-93B5 on chromosome 4, complete
             sequence
          Length = 125201

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   ggtgtcatgaaaagctttcta 442
             |||||||||||||||||||||
Sbjct: 54489 ggtgtcatgaaaagctttcta 54469
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>emb|AL606987.11| Mouse DNA sequence from clone RP23-383I4 on chromosome 4, complete
              sequence
          Length = 212647

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 422    ggtgtcatgaaaagctttcta 442
              |||||||||||||||||||||
Sbjct: 167073 ggtgtcatgaaaagctttcta 167093
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>emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on chromosome 4, complete
            sequence
          Length = 185210

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 8220 ggtgtcatgaaaagctttcta 8200
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>emb|AL713973.7| Mouse DNA sequence from clone RP23-60A13 on chromosome 4, complete
            sequence
          Length = 79377

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  ggtgtcatgaaaagctttcta 442
            |||||||||||||||||||||
Sbjct: 9324 ggtgtcatgaaaagctttcta 9304
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>emb|AL606931.6| Mouse DNA sequence from clone RP23-162H3 on chromosome 4, complete
             sequence
          Length = 108136

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   ggtgtcatgaaaagctttcta 442
             |||||||||||||||||||||
Sbjct: 47315 ggtgtcatgaaaagctttcta 47295
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>gb|AC150753.3| Bos taurus  BAC CH240-283G19 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 181464

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tcttttatcctgagcaagta 533
             ||||||||||||||||||||
Sbjct: 41270 tcttttatcctgagcaagta 41251
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>ref|XM_414818.1| PREDICTED: Gallus gallus similar to unconventional myosin-15
            (LOC416514), mRNA
          Length = 10208

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  cagctcttctctccttgatg 399
            ||||||||||||||||||||
Sbjct: 7948 cagctcttctctccttgatg 7929
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>emb|BX001006.7| Zebrafish DNA sequence from clone DKEY-148M7 in linkage group 3, complete
              sequence
          Length = 193997

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    tcctccagatttctttaatc 150
              ||||||||||||||||||||
Sbjct: 178364 tcctccagatttctttaatc 178383
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>emb|AL354868.10| Human DNA sequence from clone RP11-339A7 on chromosome 6 Contains a
             ribosomal protein L21 (RPL21) pseudogene, complete
             sequence
          Length = 164018

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    acaggtgctgaacagcaaatgaca 53
             |||||||||||| |||||||||||
Sbjct: 35821 acaggtgctgaatagcaaatgaca 35798
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>emb|BX649458.8| Zebrafish DNA sequence from clone DKEY-14P20 in linkage group 2, complete
              sequence
          Length = 147578

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    tcctccagatttctttaatc 150
              ||||||||||||||||||||
Sbjct: 103978 tcctccagatttctttaatc 103997
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>gb|AC008618.7| Homo sapiens chromosome 5 clone CTB-146E17, complete sequence
          Length = 139029

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  catctgtttccctttttctt 258
            ||||||||||||||||||||
Sbjct: 9951 catctgtttccctttttctt 9932
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>gb|AC008565.6|AC008565 Homo sapiens chromosome 5 clone CTC-538F12, complete sequence
          Length = 167086

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    catctgtttccctttttctt 258
              ||||||||||||||||||||
Sbjct: 113323 catctgtttccctttttctt 113342
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>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518C01
          Length = 173555

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    ctacagtttacaggtgctgaacag 44
             |||||||| |||||||||||||||
Sbjct: 64342 ctacagttgacaggtgctgaacag 64365
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>gb|AF091786.1|AF091786 Oncorhynchus nerka non-classical MHC class I heavy chain (Onne-UAA)
           mRNA, Onne-UAA*0101 allele, partial cds, alternatively
           spliced
          Length = 1113

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 catctgtttccctttttctt 258
           ||||||||||||||||||||
Sbjct: 475 catctgtttccctttttctt 456
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>gb|AC153902.4| Mus musculus 6 BAC RP23-5K15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208717

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    ctgtttccctttttcttgtt 261
              ||||||||||||||||||||
Sbjct: 100414 ctgtttccctttttcttgtt 100395
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>emb|BX470104.1| Zebrafish DNA sequence from clone DKEY-148M7, complete sequence
          Length = 43130

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   tcctccagatttctttaatc 150
             ||||||||||||||||||||
Sbjct: 27497 tcctccagatttctttaatc 27516
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>gb|M19647.1|RATKALA Rat renal kallikrein gene, complete cds, clone RSKG-7
          Length = 6257

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 143 ctttaatcaccataacatgaacag 166
           |||||||||||| |||||||||||
Sbjct: 921 ctttaatcaccaaaacatgaacag 944


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,216,226
Number of Sequences: 3902068
Number of extensions: 4216226
Number of successful extensions: 103781
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103652
Number of HSP's gapped (non-prelim): 129
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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