| Clone Name | rbags17a11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UC25_MAIZE (P80631) Unknown protein from 2D-PAGE of etiolated co... | 30 | 5.4 | 2 | IRK1_CAEEL (P52192) Inward rectifier potassium channel irk-1 | 29 | 7.1 |
|---|
>UC25_MAIZE (P80631) Unknown protein from 2D-PAGE of etiolated coleoptile (Spot| 77) (Fragment) Length = 15 Score = 29.6 bits (65), Expect = 5.4 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -2 Query: 497 ALGGLSRSFPVEAXE 453 A+GGLSRSFPVEA E Sbjct: 1 AIGGLSRSFPVEAFE 15
>IRK1_CAEEL (P52192) Inward rectifier potassium channel irk-1| Length = 505 Score = 29.3 bits (64), Expect = 7.1 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +2 Query: 158 NRSCDVPPLPTPSPISY 208 NRS D PLP+PSP SY Sbjct: 417 NRSSDSTPLPSPSPYSY 433 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,192,564 Number of Sequences: 219361 Number of extensions: 622100 Number of successful extensions: 2106 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2059 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2105 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)