| Clone Name | rbags16l08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CT107_HUMAN (Q5JX69) Protein C20orf107 precursor | 28 | 8.5 | 2 | V122_ASFL5 (P26706) LIS 121-2 protein precursor | 28 | 8.5 |
|---|
>CT107_HUMAN (Q5JX69) Protein C20orf107 precursor| Length = 171 Score = 27.7 bits (60), Expect = 8.5 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Frame = -2 Query: 155 CSWXPPSGSVWQCPRRPKNKATSXRLAYIT-NLPEHTHSWVGS 30 CS+ S+ Q P+ K I NLPEHT W+GS Sbjct: 16 CSYAFMFSSLRQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGS 58
>V122_ASFL5 (P26706) LIS 121-2 protein precursor| Length = 121 Score = 27.7 bits (60), Expect = 8.5 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Frame = -2 Query: 191 TGSPRSSYVXXWCSWXPPSGSVWQCPRR-PKNKATSXRLAYITNLPEHTHSWVGSSIF 21 T P S + WC++ P W C KNK T R + HS V +F Sbjct: 26 TQHPPKSELSYWCTYVPQCDFCWDCQDGICKNKITESRFI------DSNHSIVNCRVF 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,960,439 Number of Sequences: 219361 Number of extensions: 473443 Number of successful extensions: 1059 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1042 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1059 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)