ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
2ref|NM_192811.1| Oryza sativa (japonica cultivar-group), predic... 283 3e-73
3gb|AY105958.1| Zea mays PCO114043 mRNA sequence 264 3e-67
4gb|AY109071.1| Zea mays PCO122073 mRNA sequence 204 3e-49
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
6dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
7dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
8gb|AC159399.2| Physcomitrella patens clone JGIASYB-5M3, complete... 56 1e-04
9ref|NM_196521.1| Oryza sativa (japonica cultivar-group) putative... 52 0.002
10dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb00... 52 0.002
12dbj|AK099316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
13dbj|AK064344.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
14gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
15ref|NM_001031451.1| Gallus gallus FYN binding protein (FYB-120/1... 44 0.54
16gb|AC157930.7| Mus musculus chromosome 5, clone RP24-151E22, com... 44 0.54
17emb|AJ720995.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.54
18gb|AC158240.5| Pan troglodytes BAC clone CH251-542M19 from chrom... 44 0.54
19gb|AC102477.18| Mus musculus chromosome 5, clone RP24-405C17, co... 44 0.54
20gb|AC009955.4|AC009955 Homo sapiens BAC clone RP11-256I23 from 2... 44 0.54
21emb|AJ408882.1|HSA408882 Homo sapiens partial ASIC4 gene for aci... 44 0.54
22gb|AC171062.5| Rhesus Macaque BAC CH250-364H15 (Children's Hosp... 44 0.54
23gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, co... 42 2.2
24gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, com... 42 2.2
25ref|XM_544750.2| PREDICTED: Canis familiaris similar to acheron ... 42 2.2
26emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 2.2
27gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, comple... 42 2.2
28dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 42 2.2
29dbj|AB228413.1| Aspergillus oryzae cDNA, contig sequence: AoEST5286 42 2.2
30dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 42 2.2
31dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 42 2.2
32dbj|AP002793.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.2
33gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, comple... 42 2.2
34emb|AL772323.8| Mouse DNA sequence from clone RP23-370F9 on chro... 42 2.2
35gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Child... 40 8.5
36gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome... 40 8.5
37ref|NM_018357.2| Homo sapiens La ribonucleoprotein domain family... 40 8.5
38gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, comp... 40 8.5
39ref|XM_726134.1| Plasmodium yoelii yoelii str. 17XNL origin reco... 40 8.5
40ref|XM_668171.1| Plasmodium berghei strain ANKA hypothetical pro... 40 8.5
41emb|AL391688.1| Human DNA sequence from clone RP11-524D16 on chr... 40 8.5
42ref|XM_964220.1| PREDICTED: Tribolium castaneum similar to CG400... 40 8.5
43emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4,... 40 8.5
44gb|BC014018.2| Homo sapiens La ribonucleoprotein domain family, ... 40 8.5
45emb|AL833876.1|HSM805170 Homo sapiens mRNA; cDNA DKFZp762N186 (f... 40 8.5
46emb|CR592697.1| full-length cDNA clone CS0DF010YN23 of Fetal bra... 40 8.5
47dbj|AK002058.1| Homo sapiens cDNA FLJ11196 fis, clone PLACE10076... 40 8.5
48gb|AC090868.4| Homo sapiens chromosome 15, clone RP11-795G3, com... 40 8.5
49gb|BC009446.1| Homo sapiens La ribonucleoprotein domain family, ... 40 8.5
50gb|BC006082.1| Homo sapiens La ribonucleoprotein domain family, ... 40 8.5
51gb|AC010859.5| Homo sapiens chromosome , clone RP11-3D19, comple... 40 8.5
52gb|AY014830.1| Mus musculus lysyl hydroxylase 3 (Plod3) gene, co... 40 8.5
53gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome... 40 8.5
54dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
55gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-13... 40 8.5
56gb|AC117469.3| Homo sapiens 3 BAC RP11-513G11 (Roswell Park Canc... 40 8.5
57gb|AC015912.16| Homo sapiens chromosome 17, clone RP11-670E13, c... 40 8.5
58ref|XM_220782.2| PREDICTED: Rattus norvegicus RAS-like, family 1... 40 8.5
59gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, c... 40 8.5
60gb|AF443829.1| Homo sapiens acheron mRNA, complete cds 40 8.5
61gb|AF443828.1| Homo sapiens acheron mRNA, complete cds 40 8.5
62emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigrov... 40 8.5
63dbj|AK130092.1| Homo sapiens cDNA FLJ26582 fis, clone LNF07059 40 8.5
64dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clo... 40 8.5
65emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephal... 40 8.5
66gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complet... 40 8.5
67gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complet... 40 8.5
68emb|CT025549.13| Mouse DNA sequence from clone RP24-235K10 on ch... 40 8.5
69emb|AL591207.15| Mouse DNA sequence from clone RP23-392O3 on chr... 40 8.5
70emb|AL645911.14| Mouse DNA sequence from clone RP23-25M3 on chro... 40 8.5 
>dbj|AK100460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N11, full
            insert sequence
          Length = 1327

 Score =  291 bits (147), Expect = 1e-75
 Identities = 291/339 (85%)
 Strand = Plus / Minus

                                                                        
Query: 145  ttttttagtttcacttcttcggcgtatctgcataattccaggtgaatttcgcaaatgaag 204
            |||||||| || ||||||| ||||| || ||||| ||||||||| | |  |||||||| |
Sbjct: 1149 ttttttagctttacttctttggcgtgtcagcatacttccaggtgtaatgtgcaaatgagg 1090

                                                                        
Query: 205  tatattgccttccaccggccacatcttcttcgcgtatctcattgctaatctctttgaggt 264
            |||| || |||||||| || |||||||||||||||| ||   |    |||||||| ||||
Sbjct: 1089 tatactgtcttccaccagcgacatcttcttcgcgtacctggctagagatctctttcaggt 1030

                                                                        
Query: 265  catcttctgtgagcttcacctttaaggagtcaatgttggagtctagattcttgatcttag 324
            |||| || ||||| |||||||||||||||||||||||||  ||||| || || ||||| |
Sbjct: 1029 catcatccgtgaggttcacctttaaggagtcaatgttggcatctaggttttttatcttgg 970

                                                                        
Query: 325  ttgtccctggtatcggaaccacatcatccccttgatgcagaacccaggctaaagctagct 384
            |||| |||||||| || |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 969  ttgttcctggtattgggaccacatcatccccttgatgaagaacccaagctaaagctagct 910

                                                                        
Query: 385  gagcagggctgcaatggtgcttcttggccagttcttccattttcagataaagttgcttgt 444
            ||||||||||||| ||||||||||||||||| |||||| ||||||||||||| || || |
Sbjct: 909  gagcagggctgcactggtgcttcttggccagctcttccgttttcagataaagctgtttat 850

                                                   
Query: 445  tcttctccaggttttcagcagaaaaacgtggatggcctt 483
            |||||||||  |||||||||||||| |||||||| ||||
Sbjct: 849  tcttctccaaattttcagcagaaaatcgtggatgtcctt 811



 Score =  135 bits (68), Expect = 2e-28
 Identities = 116/132 (87%)
 Strand = Plus / Minus

                                                                       
Query: 485 ctgcagagaggcacaatctcgggctcgatgtcgcgtgcccacagagaccactccatctgc 544
           |||||||| |||||||| ||||| || ||||| || ||||| ||||||||||||||||| 
Sbjct: 712 ctgcagagcggcacaatttcgggttcaatgtcacgagcccagagagaccactccatctga 653

                                                                       
Query: 545 acagcagagatggggtgcacagcgtgagcacgcctgatggtgtcggggctcgcctccgat 604
           || |||| ||| |||||||| || ||||| |||||||||||||| |||||||||||||||
Sbjct: 652 actgcagtgattgggtgcacggcatgagctcgcctgatggtgtcagggctcgcctccgat 593

                       
Query: 605 aacccaatgtac 616
           | ||||||||||
Sbjct: 592 agcccaatgtac 581
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>ref|NM_192811.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 888

 Score =  283 bits (143), Expect = 3e-73
 Identities = 281/327 (85%)
 Strand = Plus / Minus

                                                                       
Query: 157 acttcttcggcgtatctgcataattccaggtgaatttcgcaaatgaagtatattgccttc 216
           ||||||| ||||| || ||||| ||||||||| | |  |||||||| ||||| || ||||
Sbjct: 886 acttctttggcgtgtcagcatacttccaggtgtaatgtgcaaatgaggtatactgtcttc 827

                                                                       
Query: 217 caccggccacatcttcttcgcgtatctcattgctaatctctttgaggtcatcttctgtga 276
           |||| || |||||||||||||||| ||   |    |||||||| |||||||| || ||||
Sbjct: 826 caccagcgacatcttcttcgcgtacctggctagagatctctttcaggtcatcatccgtga 767

                                                                       
Query: 277 gcttcacctttaaggagtcaatgttggagtctagattcttgatcttagttgtccctggta 336
           | |||||||||||||||||||||||||  ||||| || || ||||| ||||| |||||||
Sbjct: 766 ggttcacctttaaggagtcaatgttggcatctaggttttttatcttggttgttcctggta 707

                                                                       
Query: 337 tcggaaccacatcatccccttgatgcagaacccaggctaaagctagctgagcagggctgc 396
           | || |||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 706 ttgggaccacatcatccccttgatgaagaacccaagctaaagctagctgagcagggctgc 647

                                                                       
Query: 397 aatggtgcttcttggccagttcttccattttcagataaagttgcttgttcttctccaggt 456
           | ||||||||||||||||| |||||| ||||||||||||| || || ||||||||||  |
Sbjct: 646 actggtgcttcttggccagctcttccgttttcagataaagctgtttattcttctccaaat 587

                                      
Query: 457 tttcagcagaaaaacgtggatggcctt 483
           ||||||||||||| |||||||| ||||
Sbjct: 586 tttcagcagaaaatcgtggatgtcctt 560
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>gb|AY105958.1| Zea mays PCO114043 mRNA sequence
          Length = 1434

 Score =  264 bits (133), Expect = 3e-67
 Identities = 257/297 (86%), Gaps = 1/297 (0%)
 Strand = Plus / Minus

                                                                        
Query: 158  cttcttcggcgtatctgcataattccaggtgaatttcgcaaatgaagtatattgccttcc 217
            |||||| |||||||| || || |||||||||   |  |||||||||||  |||| |||||
Sbjct: 1115 cttctttggcgtatcagcgtacttccaggtggtatgtgcaaatgaagtgaattgtcttcc 1056

                                                                        
Query: 218  accggccacatcttcttcgcgtatctcattgctaatctctttgaggtcatcttctgtgag 277
            ||| |||||||||||||| |||||||   |||  || ||||| || || || ||||| ||
Sbjct: 1055 accagccacatcttcttcccgtatctggctgcccatttctttcagatcttcgtctgtcag 996

                                                                        
Query: 278  cttcacctttaaggagtcaatgttggagtctagattcttgatcttag-ttgtccctggta 336
             |||||||| ||||||||||||||||| |||||||||||||| || | ||||||||||||
Sbjct: 995  tttcaccttcaaggagtcaatgttggaatctagattcttgattttgggttgtccctggta 936

                                                                        
Query: 337  tcggaaccacatcatccccttgatgcagaacccaggctaaagctagctgagcagggctgc 396
            | |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 935  taggaaccacatcatctccttgatgcagaacccatgctaaagctagctgagcagggctgc 876

                                                                     
Query: 397  aatggtgcttcttggccagttcttccattttcagataaagttgcttgttcttctcca 453
            | |||||||| ||||||||||||||||||  || ||||| |||||||||||||||||
Sbjct: 875  actggtgcttattggccagttcttccattcgcaaataaatttgcttgttcttctcca 819



 Score =  145 bits (73), Expect = 2e-31
 Identities = 124/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 484 tctgcagagaggcacaatctcgggctcgatgtcgcgtgcccacagagaccactccatctg 543
           ||||||||| |||||||| |||||||| |||||||| | ||| |||||||||||||||||
Sbjct: 691 tctgcagagcggcacaatttcgggctcaatgtcgcgagaccagagagaccactccatctg 632

                                                                       
Query: 544 cacagcagagatggggtgcacagcgtgagcacgcctgatggtgtcggggctcgcctccga 603
           ||| || | ||| ||||||||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 631 caccgcggtgatcgggtgcacagcatgtgcacgcctgatggtgtccgggctcgcctctga 572

                                
Query: 604 taacccaatgtacttgacctt 624
            || || ||||||||||||||
Sbjct: 571 caatccgatgtacttgacctt 551
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>gb|AY109071.1| Zea mays PCO122073 mRNA sequence
          Length = 1331

 Score =  204 bits (103), Expect = 3e-49
 Identities = 211/247 (85%)
 Strand = Plus / Minus

                                                                        
Query: 207  tattgccttccaccggccacatcttcttcgcgtatctcattgctaatctctttgaggtca 266
            ||||| |||||||| |||||||||||| | |||||||   ||| ||| || || ||||| 
Sbjct: 1123 tattgtcttccaccagccacatcttctgcacgtatctggctgccaatttccttcaggtcc 1064

                                                                        
Query: 267  tcttctgtgagcttcacctttaaggagtcaatgttggagtctagattcttgatcttagtt 326
            ||  |||||||||||||||| |||||||||| |||||  ||||| |||||  | || |||
Sbjct: 1063 tcagctgtgagcttcaccttcaaggagtcaacgttggcatctaggttcttcgtttttgtt 1004

                                                                        
Query: 327  gtccctggtatcggaaccacatcatccccttgatgcagaacccaggctaaagctagctga 386
            ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1003 gtccctggtataggaaccacatcatccccttgacgcagaacccaggctagagctagctga 944

                                                                        
Query: 387  gcagggctgcaatggtgcttcttggccagttcttccattttcagataaagttgcttgttc 446
            || |||||||| |||| |||||| ||||  ||||| |||||||| ||||  |||||||||
Sbjct: 943  gctgggctgcactggtacttcttcgccaaatcttctattttcaggtaaatctgcttgttc 884

                   
Query: 447  ttctcca 453
            |||||||
Sbjct: 883  ttctcca 877



 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Minus

                                                                       
Query: 484 tctgcagagaggcacaatctcgggctcgatgtcgcgtgcccacagagaccactccatctg 543
           ||||||||| ||||| ||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 749 tctgcagagtggcacgatctcgggctcgatgtctcgggaccagagcgaccactccatctg 690

                                                                       
Query: 544 cacagcagagatggggtgcacagcgtgagcacgcctgatggtgtcggggctcgcctccga 603
           ||| || | |||||| ||||| ||||| ||||| | ||| ||||| ||||| ||||| ||
Sbjct: 689 cacggcggtgatgggatgcacggcgtgcgcacggcggattgtgtctgggctggcctctga 630

                                
Query: 604 taacccaatgtacttgacctt 624
            || || ||||||||||||||
Sbjct: 629 caagccgatgtacttgacctt 609
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  194 bits (98), Expect = 2e-46
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                            
Query: 330      cctggtatcggaaccacatcatccccttgatgcagaacccaggctaaagctagctgagca 389
                |||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 24576720 cctggtattgggaccacatcatccccttgatgaagaacccaagctaaagctagctgagca 24576779

                                                                            
Query: 390      gggctgcaatggtgcttcttggccagttcttccattttcagataaagttgcttgttcttc 449
                |||||||| ||||||||||||||||| |||||| ||||||||||||| || || ||||||
Sbjct: 24576780 gggctgcactggtgcttcttggccagctcttccgttttcagataaagctgtttattcttc 24576839

                                                  
Query: 450      tccaggttttcagcagaaaaacgtggatggcctt 483
                ||||  |||||||||||||| |||||||| ||||
Sbjct: 24576840 tccaaattttcagcagaaaatcgtggatgtcctt 24576873



 Score =  135 bits (68), Expect = 2e-28
 Identities = 116/132 (87%)
 Strand = Plus / Plus

                                                                            
Query: 485      ctgcagagaggcacaatctcgggctcgatgtcgcgtgcccacagagaccactccatctgc 544
                |||||||| |||||||| ||||| || ||||| || ||||| ||||||||||||||||| 
Sbjct: 24577142 ctgcagagcggcacaatttcgggttcaatgtcacgagcccagagagaccactccatctga 24577201

                                                                            
Query: 545      acagcagagatggggtgcacagcgtgagcacgcctgatggtgtcggggctcgcctccgat 604
                || |||| ||| |||||||| || ||||| |||||||||||||| |||||||||||||||
Sbjct: 24577202 actgcagtgattgggtgcacggcatgagctcgcctgatggtgtcagggctcgcctccgat 24577261

                            
Query: 605      aacccaatgtac 616
                | ||||||||||
Sbjct: 24577262 agcccaatgtac 24577273



 Score =  105 bits (53), Expect = 2e-19
 Identities = 155/189 (82%)
 Strand = Plus / Plus

                                                                            
Query: 145      ttttttagtttcacttcttcggcgtatctgcataattccaggtgaatttcgcaaatgaag 204
                |||||||| || ||||||| ||||| || ||||| ||||||||| | |  |||||||| |
Sbjct: 24575936 ttttttagctttacttctttggcgtgtcagcatacttccaggtgtaatgtgcaaatgagg 24575995

                                                                            
Query: 205      tatattgccttccaccggccacatcttcttcgcgtatctcattgctaatctctttgaggt 264
                |||| || |||||||| || |||||||||||||||| ||   |    |||||||| ||||
Sbjct: 24575996 tatactgtcttccaccagcgacatcttcttcgcgtacctggctagagatctctttcaggt 24576055

                                                                            
Query: 265      catcttctgtgagcttcacctttaaggagtcaatgttggagtctagattcttgatcttag 324
                |||| || ||||| |||||||||||||||||||||||||  ||||| || || ||||| |
Sbjct: 24576056 catcatccgtgaggttcacctttaaggagtcaatgttggcatctaggttttttatcttgg 24576115

                         
Query: 325      ttgtccctg 333
                |||| ||||
Sbjct: 24576116 ttgttcctg 24576124
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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1040D09
          Length = 148102

 Score =  194 bits (98), Expect = 2e-46
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                        
Query: 330  cctggtatcggaaccacatcatccccttgatgcagaacccaggctaaagctagctgagca 389
            |||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2683 cctggtattgggaccacatcatccccttgatgaagaacccaagctaaagctagctgagca 2742

                                                                        
Query: 390  gggctgcaatggtgcttcttggccagttcttccattttcagataaagttgcttgttcttc 449
            |||||||| ||||||||||||||||| |||||| ||||||||||||| || || ||||||
Sbjct: 2743 gggctgcactggtgcttcttggccagctcttccgttttcagataaagctgtttattcttc 2802

                                              
Query: 450  tccaggttttcagcagaaaaacgtggatggcctt 483
            ||||  |||||||||||||| |||||||| ||||
Sbjct: 2803 tccaaattttcagcagaaaatcgtggatgtcctt 2836



 Score =  135 bits (68), Expect = 2e-28
 Identities = 116/132 (87%)
 Strand = Plus / Plus

                                                                        
Query: 485  ctgcagagaggcacaatctcgggctcgatgtcgcgtgcccacagagaccactccatctgc 544
            |||||||| |||||||| ||||| || ||||| || ||||| ||||||||||||||||| 
Sbjct: 3105 ctgcagagcggcacaatttcgggttcaatgtcacgagcccagagagaccactccatctga 3164

                                                                        
Query: 545  acagcagagatggggtgcacagcgtgagcacgcctgatggtgtcggggctcgcctccgat 604
            || |||| ||| |||||||| || ||||| |||||||||||||| |||||||||||||||
Sbjct: 3165 actgcagtgattgggtgcacggcatgagctcgcctgatggtgtcagggctcgcctccgat 3224

                        
Query: 605  aacccaatgtac 616
            | ||||||||||
Sbjct: 3225 agcccaatgtac 3236



 Score =  105 bits (53), Expect = 2e-19
 Identities = 155/189 (82%)
 Strand = Plus / Plus

                                                                        
Query: 145  ttttttagtttcacttcttcggcgtatctgcataattccaggtgaatttcgcaaatgaag 204
            |||||||| || ||||||| ||||| || ||||| ||||||||| | |  |||||||| |
Sbjct: 1899 ttttttagctttacttctttggcgtgtcagcatacttccaggtgtaatgtgcaaatgagg 1958

                                                                        
Query: 205  tatattgccttccaccggccacatcttcttcgcgtatctcattgctaatctctttgaggt 264
            |||| || |||||||| || |||||||||||||||| ||   |    |||||||| ||||
Sbjct: 1959 tatactgtcttccaccagcgacatcttcttcgcgtacctggctagagatctctttcaggt 2018

                                                                        
Query: 265  catcttctgtgagcttcacctttaaggagtcaatgttggagtctagattcttgatcttag 324
            |||| || ||||| |||||||||||||||||||||||||  ||||| || || ||||| |
Sbjct: 2019 catcatccgtgaggttcacctttaaggagtcaatgttggcatctaggttttttatcttgg 2078

                     
Query: 325  ttgtccctg 333
            |||| ||||
Sbjct: 2079 ttgttcctg 2087
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>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0686E09
          Length = 156425

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                          
Query: 145    ttttttagtttcacttcttcggcgtatctgcataattccaggtgaatttcgcaaatgaag 204
              |||||||| || ||||||| ||||| || ||||| ||||||||| | |  |||||||| |
Sbjct: 156320 ttttttagctttacttctttggcgtgtcagcatacttccaggtgtaatgtgcaaatgagg 156379

                                                  
Query: 205    tatattgccttccaccggccacatcttcttcgcgta 240
              |||| || |||||||| || ||||||||||||||||
Sbjct: 156380 tatactgtcttccaccagcgacatcttcttcgcgta 156415
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>gb|AC159399.2| Physcomitrella patens clone JGIASYB-5M3, complete sequence
          Length = 35474

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 527   agagaccactccatctgcacagcagagatggggtgcacagcgtgagcacgcctgat 582
             ||||||||||| ||||||||||||| ||||||||| || || || ||||| |||||
Sbjct: 31607 agagaccactcaatctgcacagcagtgatggggtggaccgcatgcgcacgtctgat 31552
to top
>ref|NM_196521.1| Oryza sativa (japonica cultivar-group) putative polyprotein
           (OSJNBa0006I13.8), mRNA
          Length = 1305

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 339 ggaaccacatcatccccttgatgcagaacccagg 372
           ||||| ||||||||||||||||| ||||||||||
Sbjct: 839 ggaacaacatcatccccttgatgaagaacccagg 806



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 agagaccactccatctgcac 546
           ||||||||||||||||||||
Sbjct: 554 agagaccactccatctgcac 535
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 339      ggaaccacatcatccccttgatgcagaacccagg 372
                ||||| ||||||||||||||||| ||||||||||
Sbjct: 14220328 ggaacaacatcatccccttgatgaagaacccagg 14220295



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 527      agagaccactccatctgcac 546
                ||||||||||||||||||||
Sbjct: 14219559 agagaccactccatctgcac 14219540
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>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
             complete sequence
          Length = 142737

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 339   ggaaccacatcatccccttgatgcagaacccagg 372
             ||||| ||||||||||||||||| ||||||||||
Sbjct: 92401 ggaacaacatcatccccttgatgaagaacccagg 92368



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   agagaccactccatctgcac 546
             ||||||||||||||||||||
Sbjct: 91632 agagaccactccatctgcac 91613
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>dbj|AK099316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145C18, full
           insert sequence
          Length = 1334

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 339 ggaaccacatcatccccttgatgcagaacccagg 372
           ||||| ||||||||||||||||| ||||||||||
Sbjct: 920 ggaacaacatcatccccttgatgaagaacccagg 887



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 agagaccactccatctgcac 546
           ||||||||||||||||||||
Sbjct: 635 agagaccactccatctgcac 616
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>dbj|AK064344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H09, full
           insert sequence
          Length = 1355

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 339 ggaaccacatcatccccttgatgcagaacccagg 372
           ||||| ||||||||||||||||| ||||||||||
Sbjct: 935 ggaacaacatcatccccttgatgaagaacccagg 902



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 agagaccactccatctgcac 546
           ||||||||||||||||||||
Sbjct: 650 agagaccactccatctgcac 631
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 339      ggaaccacatcatccccttgatgcagaacccagg 372
                ||||| ||||||||||||||||| ||||||||||
Sbjct: 14228570 ggaacaacatcatccccttgatgaagaacccagg 14228537



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 527      agagaccactccatctgcac 546
                ||||||||||||||||||||
Sbjct: 14227801 agagaccactccatctgcac 14227782
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>ref|NM_001031451.1| Gallus gallus FYN binding protein (FYB-120/130) (FYB), mRNA
          Length = 3618

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 127  atcactgtctccacaatctttt 148
            ||||||||||||||||||||||
Sbjct: 2310 atcactgtctccacaatctttt 2289
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>gb|AC157930.7| Mus musculus chromosome 5, clone RP24-151E22, complete sequence
          Length = 146346

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 269    ttctgtgagcttcacctttaaggagtcaat 298
              |||||||| ||| |||||||||||||||||
Sbjct: 114836 ttctgtgaccttgacctttaaggagtcaat 114865
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>emb|AJ720995.1| Gallus gallus mRNA for hypothetical protein, clone 32b13
          Length = 3618

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 127  atcactgtctccacaatctttt 148
            ||||||||||||||||||||||
Sbjct: 2310 atcactgtctccacaatctttt 2289
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>gb|AC158240.5| Pan troglodytes BAC clone CH251-542M19 from chromosome unknown,
             complete sequence
          Length = 217064

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 538   catctgcacagcagagatgggg 559
             ||||||||||||||||||||||
Sbjct: 70396 catctgcacagcagagatgggg 70375
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>gb|AC102477.18| Mus musculus chromosome 5, clone RP24-405C17, complete sequence
          Length = 179495

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 269  ttctgtgagcttcacctttaaggagtcaat 298
            |||||||| ||| |||||||||||||||||
Sbjct: 5189 ttctgtgaccttgacctttaaggagtcaat 5160
to top
>gb|AC009955.4|AC009955 Homo sapiens BAC clone RP11-256I23 from 2, complete sequence
          Length = 135033

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 538  catctgcacagcagagatgggg 559
            ||||||||||||||||||||||
Sbjct: 2892 catctgcacagcagagatgggg 2871
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>emb|AJ408882.1|HSA408882 Homo sapiens partial ASIC4 gene for acid sensing ion channel 4,
           exons 2-5
          Length = 1315

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 538 catctgcacagcagagatgggg 559
           ||||||||||||||||||||||
Sbjct: 297 catctgcacagcagagatgggg 276
to top
>gb|AC171062.5| Rhesus Macaque  BAC CH250-364H15 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 164174

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 538    catctgcacagcagagatgggg 559
              ||||||||||||||||||||||
Sbjct: 156204 catctgcacagcagagatgggg 156183
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>gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, complete sequence
          Length = 196891

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 423    attttcagataaagttgcttgttct 447
              |||||||||||| ||||||||||||
Sbjct: 153846 attttcagataatgttgcttgttct 153870
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>gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, complete sequence
          Length = 195146

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 423    attttcagataaagttgcttgttct 447
              |||||||||||| ||||||||||||
Sbjct: 192475 attttcagataatgttgcttgttct 192499
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>ref|XM_544750.2| PREDICTED: Canis familiaris similar to acheron isoform 1
           (LOC487625), mRNA
          Length = 2254

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 446 cttctccaggttttcagcagaaaaa 470
           |||||||||||||||| ||||||||
Sbjct: 633 cttctccaggttttcatcagaaaaa 609
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 540     tctgcacagcagagatggggtgcacagcgtgagcacg 576
               ||||||| |||| |||||||||||| ||||| |||||
Sbjct: 4415495 tctgcaccgcagtgatggggtgcaccgcgtgcgcacg 4415459
to top
>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence
          Length = 183554

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    cttccaccggccacatcttct 233
              |||||||||||||||||||||
Sbjct: 138871 cttccaccggccacatcttct 138851
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 460     cagcagaaaaacgtggatggc 480
               |||||||||||||||||||||
Sbjct: 3013634 cagcagaaaaacgtggatggc 3013614
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>dbj|AB228413.1| Aspergillus oryzae cDNA, contig sequence: AoEST5286
          Length = 600

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 534 actccatctgcacagcagagatggggtgcacagcgtg 570
           |||||||||||||||| | ||||||||| || |||||
Sbjct: 569 actccatctgcacagcggcgatggggtggacggcgtg 533
to top
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 553    gatggggtgcacagcgtgagc 573
              |||||||||||||||||||||
Sbjct: 829591 gatggggtgcacagcgtgagc 829571
to top
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 534   actccatctgcacagcagagatggggtgcacagcgtg 570
             |||||||||||||||| | ||||||||| || |||||
Sbjct: 97301 actccatctgcacagcggcgatggggtggacggcgtg 97337
to top
>dbj|AP002793.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-691L4, complete
             sequence
          Length = 181140

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 525   acagagaccactccatctgcacagc 549
             |||||||||||| ||||||||||||
Sbjct: 67868 acagagaccactgcatctgcacagc 67844
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>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence
          Length = 256632

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    cttccaccggccacatcttct 233
              |||||||||||||||||||||
Sbjct: 151824 cttccaccggccacatcttct 151844
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>emb|AL772323.8| Mouse DNA sequence from clone RP23-370F9 on chromosome 2, complete
             sequence
          Length = 212243

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 381   agctgagcagggctgcaatgg 401
             |||||||||||||||||||||
Sbjct: 66863 agctgagcagggctgcaatgg 66883
to top
>gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 156223

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 540    tctgcacagcagagatgggg 559
              ||||||||||||||||||||
Sbjct: 101066 tctgcacagcagagatgggg 101047
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>gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome 16, complete sequence
          Length = 189550

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   cacaatcttttttagtttca 157
             ||||||||||||||||||||
Sbjct: 33342 cacaatcttttttagtttca 33361
to top
>ref|NM_018357.2| Homo sapiens La ribonucleoprotein domain family, member 6 (LARP6),
           transcript variant 1, mRNA
          Length = 2065

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 404 cttctccaggttttcatcagaaaa 381
to top
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence
          Length = 289751

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   ctccatctgcacagcagaga 554
             ||||||||||||||||||||
Sbjct: 46462 ctccatctgcacagcagaga 46481
to top
>ref|XM_726134.1| Plasmodium yoelii yoelii str. 17XNL origin recognition complex
           subunit 2 (PY03235) partial mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  gacaattcacaagatgaaga 69
           ||||||||||||||||||||
Sbjct: 106 gacaattcacaagatgaaga 125
to top
>ref|XM_668171.1| Plasmodium berghei strain ANKA hypothetical protein (PB000518.03.0)
            partial mRNA
          Length = 1167

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   gacaattcacaagatgaaga 69
            ||||||||||||||||||||
Sbjct: 1078 gacaattcacaagatgaaga 1097
to top
>emb|AL391688.1| Human DNA sequence from clone RP11-524D16 on chromosome X Contains the
             3' end of the gene for sushi-repeat protein (SRPUL) and
             the 3' end of the SYTL4 gene for synaptotagmin-like 4
             (granuphilin-a), complete sequence
          Length = 46229

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   agaccactccatctgcacag 548
             ||||||||||||||||||||
Sbjct: 25205 agaccactccatctgcacag 25186
to top
>ref|XM_964220.1| PREDICTED: Tribolium castaneum similar to CG40084-PC.3 (LOC657784),
           mRNA
          Length = 2787

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 cacatcatccccttgatgca 363
           ||||||||||||||||||||
Sbjct: 858 cacatcatccccttgatgca 839
to top
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20,
              complete sequence
          Length = 145825

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 523    ccacagagaccactccatctgcacagcagagatggggtgcacagcgtg 570
              ||||||||||||||| | ||| ||||| | |||||| ||||| |||||
Sbjct: 101978 ccacagagaccactcaagctggacagctgtgatgggatgcactgcgtg 101931
to top
>gb|BC014018.2| Homo sapiens La ribonucleoprotein domain family, member 6,
           transcript variant 1, mRNA (cDNA clone MGC:20301
           IMAGE:4127153), complete cds
          Length = 2022

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 361 cttctccaggttttcatcagaaaa 338
to top
>emb|AL833876.1|HSM805170 Homo sapiens mRNA; cDNA DKFZp762N186 (from clone DKFZp762N186)
          Length = 2024

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 364 cttctccaggttttcatcagaaaa 341
to top
>emb|CR592697.1| full-length cDNA clone CS0DF010YN23 of Fetal brain of Homo sapiens
           (human)
          Length = 2004

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 393 cttctccaggttttcatcagaaaa 370
to top
>dbj|AK002058.1| Homo sapiens cDNA FLJ11196 fis, clone PLACE1007688, weakly similar
           to LA PROTEIN HOMOLOG
          Length = 2061

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 404 cttctccaggttttcatcagaaaa 381
to top
>gb|AC090868.4| Homo sapiens chromosome 15, clone RP11-795G3, complete sequence
          Length = 183890

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 446   cttctccaggttttcagcagaaaa 469
             |||||||||||||||| |||||||
Sbjct: 69564 cttctccaggttttcatcagaaaa 69541
to top
>gb|BC009446.1| Homo sapiens La ribonucleoprotein domain family, member 6,
           transcript variant 1, mRNA (cDNA clone MGC:15884
           IMAGE:3529516), complete cds
          Length = 2018

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 357 cttctccaggttttcatcagaaaa 334
to top
>gb|BC006082.1| Homo sapiens La ribonucleoprotein domain family, member 6,
           transcript variant 1, mRNA (cDNA clone MGC:12583
           IMAGE:2961587), complete cds
          Length = 2018

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 357 cttctccaggttttcatcagaaaa 334
to top
>gb|AC010859.5| Homo sapiens chromosome , clone RP11-3D19, complete sequence
          Length = 171301

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     acaagatgaagatacaggga 77
              ||||||||||||||||||||
Sbjct: 123845 acaagatgaagatacaggga 123864
to top
>gb|AY014830.1| Mus musculus lysyl hydroxylase 3 (Plod3) gene, complete cds
          Length = 15549

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tcttctgtgagcttcacctt 286
             ||||||||||||||||||||
Sbjct: 11337 tcttctgtgagcttcacctt 11356
to top
>gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome 13, complete
            sequence
          Length = 199707

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 268  cttctgtgagcttcacctttaagg 291
            |||||||||||||||| |||||||
Sbjct: 6929 cttctgtgagcttcacttttaagg 6952
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 523      ccacagagaccactccatctgcacagcagagatggggtgcacagcgtg 570
                ||||||||||||||| | ||| ||||| | |||||| ||||| |||||
Sbjct: 16141228 ccacagagaccactcaagctggacagctgtgatgggatgcactgcgtg 16141181
to top
>gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-138H8, complete sequence
          Length = 172850

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 446   cttctccaggttttcagcagaaaa 469
             |||||||||||||||| |||||||
Sbjct: 13177 cttctccaggttttcatcagaaaa 13154
to top
>gb|AC117469.3| Homo sapiens 3 BAC RP11-513G11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144820

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    agatgaagatacagggagca 80
             ||||||||||||||||||||
Sbjct: 64196 agatgaagatacagggagca 64177
to top
>gb|AC015912.16| Homo sapiens chromosome 17, clone RP11-670E13, complete sequence
          Length = 118172

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 316  tgatcttagttgtccctggt 335
            ||||||||||||||||||||
Sbjct: 7153 tgatcttagttgtccctggt 7134
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>ref|XM_220782.2| PREDICTED: Rattus norvegicus RAS-like, family 10, member B
           (predicted) (Rasl10b_predicted), mRNA
          Length = 1269

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 540 tctgcacagcagagatgggg 559
           ||||||||||||||||||||
Sbjct: 7   tctgcacagcagagatgggg 26
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>gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, complete sequence
          Length = 160484

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   tgatcttagttgtccctggt 335
             ||||||||||||||||||||
Sbjct: 19005 tgatcttagttgtccctggt 19024
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>gb|AF443829.1| Homo sapiens acheron mRNA, complete cds
          Length = 2057

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 403 cttctccaggttttcatcagaaaa 380
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>gb|AF443828.1| Homo sapiens acheron mRNA, complete cds
          Length = 2057

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 403 cttctccaggttttcatcagaaaa 380
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>emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigroviridis, T-cell receptor alpha
             delta locus (germline)
          Length = 74861

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   gatggtgtcggggctcgcct 599
             ||||||||||||||||||||
Sbjct: 49484 gatggtgtcggggctcgcct 49465
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>dbj|AK130092.1| Homo sapiens cDNA FLJ26582 fis, clone LNF07059
          Length = 1537

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 cttctccaggttttcagcagaaaa 469
           |||||||||||||||| |||||||
Sbjct: 304 cttctccaggttttcatcagaaaa 281
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>dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clone: KB1573B4, complete
             sequence
          Length = 157927

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    acaagatgaagatacaggga 77
             ||||||||||||||||||||
Sbjct: 80102 acaagatgaagatacaggga 80121
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>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 262797

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    cttcttggccagttcttcca 423
              ||||||||||||||||||||
Sbjct: 104212 cttcttggccagttcttcca 104193
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>gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complete sequence
          Length = 195371

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    tcttctgtgagcttcacctt 286
              ||||||||||||||||||||
Sbjct: 183078 tcttctgtgagcttcacctt 183097
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>gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complete sequence
          Length = 177652

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    tcttctgtgagcttcacctt 286
              ||||||||||||||||||||
Sbjct: 149502 tcttctgtgagcttcacctt 149483
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>emb|CT025549.13| Mouse DNA sequence from clone RP24-235K10 on chromosome 13, complete
              sequence
          Length = 162143

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 268    cttctgtgagcttcacctttaagg 291
              |||||||||||||||| |||||||
Sbjct: 113971 cttctgtgagcttcacttttaagg 113994
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>emb|AL591207.15| Mouse DNA sequence from clone RP23-392O3 on chromosome 12, complete
             sequence
          Length = 211056

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   ctccatctgcacagcagaga 554
             ||||||||||||||||||||
Sbjct: 61129 ctccatctgcacagcagaga 61110
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>emb|AL645911.14| Mouse DNA sequence from clone RP23-25M3 on chromosome 11, complete
             sequence
          Length = 244653

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   cttggccagttcttccattt 426
             ||||||||||||||||||||
Sbjct: 11820 cttggccagttcttccattt 11801


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,171,219
Number of Sequences: 3902068
Number of extensions: 6171219
Number of successful extensions: 130867
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130548
Number of HSP's gapped (non-prelim): 316
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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