ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HEY1_HUMAN (Q9Y5J3) Hairy/enhancer-of-split related with YRPW mo... 30 4.6
2HEY1_CANFA (Q9TSZ2) Hairy/enhancer-of-split related with YRPW mo... 30 4.6
3HEY1_MOUSE (Q9WV93) Hairy/enhancer-of-split related with YRPW mo... 30 4.6
4MARF_DROME (Q7YU24) Transmembrane GTPase Marf (EC 3.6.5.-) (Mito... 30 6.1

>HEY1_HUMAN (Q9Y5J3) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy|
           and enhancer of split related 1) (HESR-1)
           (Cardiovascular helix-loop-helix factor 2) (HES-related
           repressor protein 2) (HERP2)
          Length = 304

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = -2

Query: 465 KRRRGMSILRRRYRLLNTLGWISKLHVSQFKTQKDGLLLSSKIL 334
           KRRRG+   RRR R+ N+L  + +L  S F+ Q    L  ++IL
Sbjct: 51  KRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEIL 94



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>HEY1_CANFA (Q9TSZ2) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy|
           and enhancer of split related 1) (HESR-1)
          Length = 304

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = -2

Query: 465 KRRRGMSILRRRYRLLNTLGWISKLHVSQFKTQKDGLLLSSKIL 334
           KRRRG+   RRR R+ N+L  + +L  S F+ Q    L  ++IL
Sbjct: 51  KRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEIL 94



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>HEY1_MOUSE (Q9WV93) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy|
           and enhancer of split-related 1) (HESR-1)
          Length = 299

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = -2

Query: 465 KRRRGMSILRRRYRLLNTLGWISKLHVSQFKTQKDGLLLSSKIL 334
           KRRRG+   RRR R+ N+L  + +L  S F+ Q    L  ++IL
Sbjct: 51  KRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEIL 94



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>MARF_DROME (Q7YU24) Transmembrane GTPase Marf (EC 3.6.5.-) (Mitochondrial|
           assembly regulatory factor) (Mitofusin)
          Length = 810

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = -1

Query: 586 SSTYTRLQYTFDTCVEGISDETPEDEGRMLITKAVWSKLHKEKTWDEYIKEKIQIAKH 413
           SST+ RL  T DT    ++DE    + ++ I +A   +L   +    YI+ ++ I +H
Sbjct: 747 SSTFARLCRTVDTATTDMNDELKTLDSQLNILEANQKQLKLLRNKANYIQNELDIFEH 804


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,763,797
Number of Sequences: 219361
Number of extensions: 2000659
Number of successful extensions: 4411
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4411
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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