ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags17a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 64 6e-07
2gb|AC125120.4| Mus musculus BAC clone RP24-267M16 from chromosom... 46 0.14
3gb|AC147248.5| Mus musculus BAC clone RP24-83D19 from 1, complet... 46 0.14
4ref|XM_389862.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.2
5gb|AC073066.5| Homo sapiens BAC clone RP11-149P12 from 2, comple... 42 2.2
6emb|AL355099.5|CNS05TCI Human chromosome 14 DNA sequence BAC R-1... 42 2.2
7gb|AC147867.3| Gopherus agassizii clone TAMGA-59P20, complete se... 40 8.7
8ref|XM_529935.1| PREDICTED: Pan troglodytes LOC455290 (LOC455290... 40 8.7
9gb|AC164310.2| Mus musculus BAC clone RP23-139E15 from chromosom... 40 8.7
10gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, com... 40 8.7
11gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, c... 40 8.7
12gb|AC131783.4| Mus musculus BAC clone RP24-377P12 from chromosom... 40 8.7
13gb|AC131763.4| Mus musculus BAC clone RP24-231M1 from chromosome... 40 8.7
14gb|AC145569.3| Mus musculus BAC clone RP24-89N16 from chromosome... 40 8.7
15gb|AC145605.3| Mus musculus BAC clone RP24-246N9 from chromosome... 40 8.7
16gb|AC147265.2| Mus musculus BAC clone RP24-233K2 from chromosome... 40 8.7
17gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosom... 40 8.7
18gb|AC145577.2| Mus musculus BAC clone RP24-382J15 from chromosom... 40 8.7
19gb|AC183431.1| Mus musculus BAC clone RP24-128G23 from chromosom... 40 8.7
20gb|AC175670.3| Mus musculus BAC clone RP24-304I16 from chromosom... 40 8.7
21gb|AC175494.3| Mus musculus BAC clone RP24-75G20 from chromosome... 40 8.7
22gb|AC132591.4| Mus musculus BAC clone RP24-279A11 from chromosom... 40 8.7
23gb|AC140255.4| Mus musculus BAC clone RP24-291E19 from chromosom... 40 8.7
24gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome... 40 8.7
25gb|AC140258.4| Mus musculus BAC clone RP24-295F23 from chromosom... 40 8.7
26gb|AC140423.2| Mus musculus BAC clone RP24-446B23 from chromosom... 40 8.7
27gb|AC142412.3| Mus musculus BAC clone RP24-75E18 from chromosome... 40 8.7
28gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosom... 40 8.7
29gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosom... 40 8.7
30gb|AC145596.3| Mus musculus BAC clone RP24-211L15 from chromosom... 40 8.7
31gb|AC140390.1| Mus musculus BAC clone RP24-207C7 from chromosome... 40 8.7
32gb|AC134852.4| Mus musculus BAC clone RP24-248B6 from chromosome... 40 8.7
33gb|AC142473.2| Mus musculus BAC clone RP24-448M19 from chromosom... 40 8.7
34gb|AC142253.3| Mus musculus BAC clone RP24-555O3 from chromosome... 40 8.7
35emb|CR730313.2|CNS0GQGE Tetraodon nigroviridis full-length cDNA 40 8.7
36emb|CR726849.2|CNS0GNS7 Tetraodon nigroviridis full-length cDNA 40 8.7
37emb|CR722624.2|CNS0GKIU Tetraodon nigroviridis full-length cDNA 40 8.7
38emb|CR722552.2|CNS0GKGU Tetraodon nigroviridis full-length cDNA 40 8.7
39emb|CR722220.2|CNS0GK7M Tetraodon nigroviridis full-length cDNA 40 8.7
40emb|CR721383.2|CNS0GJKD Tetraodon nigroviridis full-length cDNA 40 8.7
41emb|CR708412.2|CNS0G9K8 Tetraodon nigroviridis full-length cDNA 40 8.7
42emb|CR700498.2|CNS0G3GE Tetraodon nigroviridis full-length cDNA 40 8.7
43emb|CR692110.2|CNS0FWZE Tetraodon nigroviridis full-length cDNA 40 8.7
44emb|CR690548.2|CNS0FVS0 Tetraodon nigroviridis full-length cDNA 40 8.7
45emb|CR684372.2|CNS0FR0G Tetraodon nigroviridis full-length cDNA 40 8.7
46emb|CR660978.2|CNS0F8ZC Tetraodon nigroviridis full-length cDNA 40 8.7
47emb|CR645135.2|CNS0EWR9 Tetraodon nigroviridis full-length cDNA 40 8.7
48emb|CR642342.2|CNS0EULO Tetraodon nigroviridis full-length cDNA 40 8.7
49emb|CR641927.2|CNS0EUA5 Tetraodon nigroviridis full-length cDNA 40 8.7
50emb|CR638532.2|CNS0ERNU Tetraodon nigroviridis full-length cDNA 40 8.7
51emb|CR634746.2|CNS0EOQO Tetraodon nigroviridis full-length cDNA 40 8.7
52gb|AC110917.11| Mus musculus, clone RP23-155I20, complete sequence 40 8.7
53emb|AL591394.11| Human DNA sequence from clone RP11-1145B22 on c... 40 8.7
54emb|Y12776.1|ATY12776 Arabidopsis thaliana DNA, 40 kb surroundin... 40 8.7
55gb|AC174232.4| Mus musculus BAC clone RP24-66G1 from chromosome ... 40 8.7
56emb|AJ620212.1| TT virus ORF1 and ORF2, isolate tth6 40 8.7
57gb|AY678298.1| Lycopersicon esculentum clone 56B23 chromosome 6,... 40 8.7
58gb|AC132294.4| Mus musculus BAC clone RP24-324F17 from chromosom... 40 8.7
59gb|AC174478.3| Mus musculus BAC clone RP24-72B9 from chromosome ... 40 8.7
60gb|AC182366.4| Mus musculus BAC clone RP24-360I14 from chromosom... 40 8.7
61gb|AC182454.2| Mus musculus BAC clone RP24-141G12 from chromosom... 40 8.7
62gb|AC174641.3| Mus musculus BAC clone RP24-406C15 from chromosom... 40 8.7
63gb|AC144648.3| Mus musculus BAC clone RP24-318J19 from chromosom... 40 8.7
64gb|AC060761.10| Mus musculus chromosome 17, clone RP23-218D19, c... 40 8.7
65gb|DP000007.1| Gopherus agassizii target 1 genomic scaffold 40 8.7
66gb|AC009077.7|AC009077 Homo sapiens chromosome 16 clone RP11-331... 40 8.7
67gb|AC175461.3| Mus musculus BAC clone RP24-64J17 from chromosome... 40 8.7
68gb|AC175710.2| Mus musculus BAC clone RP24-44O16 from chromosome... 40 8.7
69gb|AC007599.6| Homo sapiens chromosome 16 clone RP11-177N22, com... 40 8.7
70gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, comple... 40 8.7
71gb|AC173708.4| Mus musculus BAC clone RP24-140O8 from chromosome... 40 8.7
72gb|AC012305.7| Homo sapiens BAC clone RP11-84G18 from 2, complet... 40 8.7
73gb|AC175033.2| Mus musculus BAC clone RP24-283I7 from chromosome... 40 8.7
74gb|AC141474.4| Mus musculus BAC clone RP24-192L11 from chromosom... 40 8.7
75gb|AC061957.3|F22L4 Sequence of BAC F22L4 from Arabidopsis thali... 40 8.7
76gb|AC009526.4|AC009526 Arabidopsis thaliana chromosome I BAC F2J... 40 8.7
77gb|AC007533.2|AC007533 Homo sapiens chromosome 16 clone RPCI-11_... 40 8.7
78gb|AC145585.4| Mus musculus BAC clone RP24-167E2 from Y, complet... 40 8.7
79gb|AC145579.4| Mus musculus BAC clone RP24-371G22 from Y, comple... 40 8.7
80gb|AC004031.1|AC004031 Homo sapiens 12q24 PAC RPCI1-261P5 (Roswe... 40 8.7
81gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, comp... 40 8.7
82emb|AL627183.16| Mouse DNA sequence from clone RP23-345H2 on chr... 40 8.7
83emb|AL845262.3| Mouse DNA sequence from clone RP23-14N22 on chro... 40 8.7
84dbj|AB036933.1| Arabidopsis thaliana AtHDC gene for histidine de... 40 8.7
85emb|AL670670.7| Mouse DNA sequence from clone RP23-234O7 on chro... 40 8.7 
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 125  tataaaatatagggggagtgttgatcctagtgtgtgtgtcttgc 168
            |||||||||||||||||||||||||||   ||||||||||||||
Sbjct: 9176 tataaaatatagggggagtgttgatccggatgtgtgtgtcttgc 9219
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>gb|AC125120.4| Mus musculus BAC clone RP24-267M16 from chromosome 1, complete sequence
          Length = 183382

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 411   atgtgtttagcaatctgtatctt 433
             |||||||||||||||||||||||
Sbjct: 54411 atgtgtttagcaatctgtatctt 54433
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>gb|AC147248.5| Mus musculus BAC clone RP24-83D19 from 1, complete sequence
          Length = 176741

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 411    atgtgtttagcaatctgtatctt 433
              |||||||||||||||||||||||
Sbjct: 174281 atgtgtttagcaatctgtatctt 174303
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>ref|XM_389862.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09686.1)
            partial mRNA
          Length = 2094

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tcttctctttgtgaagcttgc 477
            |||||||||||||||||||||
Sbjct: 2062 tcttctctttgtgaagcttgc 2042
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>gb|AC073066.5| Homo sapiens BAC clone RP11-149P12 from 2, complete sequence
          Length = 169286

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 599   aaaattgtatacacttctcat 619
             |||||||||||||||||||||
Sbjct: 50842 aaaattgtatacacttctcat 50822
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>emb|AL355099.5|CNS05TCI Human chromosome 14 DNA sequence BAC R-1A16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155827

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 425    ctgtatcttctccttaatata 445
              |||||||||||||||||||||
Sbjct: 139000 ctgtatcttctccttaatata 139020
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>gb|AC147867.3| Gopherus agassizii clone TAMGA-59P20, complete sequence
          Length = 87205

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   ttgccttgtttataaaatat 134
             ||||||||||||||||||||
Sbjct: 57749 ttgccttgtttataaaatat 57730
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>ref|XM_529935.1| PREDICTED: Pan troglodytes LOC455290 (LOC455290), mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  taaaatatagggggagtgtt 146
            ||||||||||||||||||||
Sbjct: 1753 taaaatatagggggagtgtt 1772
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>gb|AC164310.2| Mus musculus BAC clone RP23-139E15 from chromosome 8, complete sequence
          Length = 204269

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             |||||||||||||| |||||||||
Sbjct: 33334 aatgtgtttagcaaactgtatctt 33357
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>gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, complete sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  aagcaacgaacaatattttg 343
            ||||||||||||||||||||
Sbjct: 8942 aagcaacgaacaatattttg 8923
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>gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, complete sequence
          Length = 159722

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 163    tcttgcattccacaagcattcatt 186
              |||| |||||||||||||||||||
Sbjct: 100304 tcttccattccacaagcattcatt 100281
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>gb|AC131783.4| Mus musculus BAC clone RP24-377P12 from chromosome Y, complete sequence
          Length = 223801

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 197478 aatgtgtttagcaatttgtatctt 197455
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>gb|AC131763.4| Mus musculus BAC clone RP24-231M1 from chromosome Y, complete sequence
          Length = 152276

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 82060 aatgtgtttagcaatttgtatctt 82083
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>gb|AC145569.3| Mus musculus BAC clone RP24-89N16 from chromosome Y, complete sequence
          Length = 204741

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 110047 aatgtgtttagcaatttgtatctt 110070
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>gb|AC145605.3| Mus musculus BAC clone RP24-246N9 from chromosome Y, complete sequence
          Length = 147478

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 81862 aatgtgtttagcaatttgtatctt 81839
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>gb|AC147265.2| Mus musculus BAC clone RP24-233K2 from chromosome Y, complete sequence
          Length = 171430

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 132989 aatgtgtttagcaatttgtatctt 132966
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>gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosome Y, complete sequence
          Length = 208700

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 141390 aatgtgtttagcaatttgtatctt 141413
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>gb|AC145577.2| Mus musculus BAC clone RP24-382J15 from chromosome Y, complete sequence
          Length = 223903

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 195788 aatgtgtttagcaatttgtatctt 195811
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>gb|AC183431.1| Mus musculus BAC clone RP24-128G23 from chromosome y, complete
            sequence
          Length = 158633

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 410  aatgtgtttagcaatctgtatctt 433
            ||||||||||||||| ||||||||
Sbjct: 1449 aatgtgtttagcaatttgtatctt 1426
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>gb|AC175670.3| Mus musculus BAC clone RP24-304I16 from chromosome y, complete sequence
          Length = 168071

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 110724 aatgtgtttagcaatttgtatctt 110701
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>gb|AC175494.3| Mus musculus BAC clone RP24-75G20 from chromosome y, complete sequence
          Length = 229858

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 130467 aatgtgtttagcaatttgtatctt 130490
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>gb|AC132591.4| Mus musculus BAC clone RP24-279A11 from chromosome Y, complete sequence
          Length = 141121

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 54639 aatgtgtttagcaatttgtatctt 54662
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>gb|AC140255.4| Mus musculus BAC clone RP24-291E19 from chromosome Y, complete sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 78944 aatgtgtttagcaatttgtatctt 78921
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>gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome Y, complete sequence
          Length = 162710

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 16931 aatgtgtttagcaatttgtatctt 16908
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>gb|AC140258.4| Mus musculus BAC clone RP24-295F23 from chromosome Y, complete sequence
          Length = 176758

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 151099 aatgtgtttagcaatttgtatctt 151122
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>gb|AC140423.2| Mus musculus BAC clone RP24-446B23 from chromosome Y, complete sequence
          Length = 203358

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 171037 aatgtgtttagcaatttgtatctt 171014
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>gb|AC142412.3| Mus musculus BAC clone RP24-75E18 from chromosome Y, complete sequence
          Length = 175697

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 12562 aatgtgtttagcaatttgtatctt 12585
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>gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosome Y, complete sequence
          Length = 199089

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 42488 aatgtgtttagcaatttgtatctt 42511
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>gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosome Y, complete
            sequence
          Length = 143221

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 410  aatgtgtttagcaatctgtatctt 433
            ||||||||||||||| ||||||||
Sbjct: 2106 aatgtgtttagcaatttgtatctt 2083
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>gb|AC145596.3| Mus musculus BAC clone RP24-211L15 from chromosome Y, complete sequence
          Length = 155644

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 81327 aatgtgtttagcaatttgtatctt 81304
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>gb|AC140390.1| Mus musculus BAC clone RP24-207C7 from chromosome Y, complete sequence
          Length = 121757

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 58290 aatgtgtttagcaatttgtatctt 58267
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>gb|AC134852.4| Mus musculus BAC clone RP24-248B6 from chromosome Y, complete sequence
          Length = 186637

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 110351 aatgtgtttagcaatttgtatctt 110374
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>gb|AC142473.2| Mus musculus BAC clone RP24-448M19 from chromosome Y, complete sequence
          Length = 143928

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 109563 aatgtgtttagcaatttgtatctt 109540
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>gb|AC142253.3| Mus musculus BAC clone RP24-555O3 from chromosome Y, complete sequence
          Length = 153917

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 28022 aatgtgtttagcaatttgtatctt 28045
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>emb|CR730313.2|CNS0GQGE Tetraodon nigroviridis full-length cDNA
          Length = 913

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 737 aaactgcctttgtaatcaac 756
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>emb|CR726849.2|CNS0GNS7 Tetraodon nigroviridis full-length cDNA
          Length = 904

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 736 aaactgcctttgtaatcaac 755
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>emb|CR722624.2|CNS0GKIU Tetraodon nigroviridis full-length cDNA
          Length = 1020

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 733 aaactgcctttgtaatcaac 752
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>emb|CR722552.2|CNS0GKGU Tetraodon nigroviridis full-length cDNA
          Length = 961

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 684 aaactgcctttgtaatcaac 703
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>emb|CR722220.2|CNS0GK7M Tetraodon nigroviridis full-length cDNA
          Length = 1021

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 734 aaactgcctttgtaatcaac 753
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>emb|CR721383.2|CNS0GJKD Tetraodon nigroviridis full-length cDNA
          Length = 1019

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 735 aaactgcctttgtaatcaac 754
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>emb|CR708412.2|CNS0G9K8 Tetraodon nigroviridis full-length cDNA
          Length = 907

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 734 aaactgcctttgtaatcaac 753
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>emb|CR700498.2|CNS0G3GE Tetraodon nigroviridis full-length cDNA
          Length = 996

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 726 aaactgcctttgtaatcaac 745
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>emb|CR692110.2|CNS0FWZE Tetraodon nigroviridis full-length cDNA
          Length = 995

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 723 aaactgcctttgtaatcaac 742
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>emb|CR690548.2|CNS0FVS0 Tetraodon nigroviridis full-length cDNA
          Length = 1012

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 725 aaactgcctttgtaatcaac 744
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>emb|CR684372.2|CNS0FR0G Tetraodon nigroviridis full-length cDNA
          Length = 905

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 737 aaactgcctttgtaatcaac 756
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>emb|CR660978.2|CNS0F8ZC Tetraodon nigroviridis full-length cDNA
          Length = 842

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 685 aaactgcctttgtaatcaac 704
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>emb|CR645135.2|CNS0EWR9 Tetraodon nigroviridis full-length cDNA
          Length = 905

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 737 aaactgcctttgtaatcaac 756
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>emb|CR642342.2|CNS0EULO Tetraodon nigroviridis full-length cDNA
          Length = 1012

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 729 aaactgcctttgtaatcaac 748
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>emb|CR641927.2|CNS0EUA5 Tetraodon nigroviridis full-length cDNA
          Length = 959

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 698 aaactgcctttgtaatcaac 717
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>emb|CR638532.2|CNS0ERNU Tetraodon nigroviridis full-length cDNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 969 aaactgcctttgtaatcaac 988
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>emb|CR634746.2|CNS0EOQO Tetraodon nigroviridis full-length cDNA
          Length = 865

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 aaactgcctttgtaatcaac 500
           ||||||||||||||||||||
Sbjct: 697 aaactgcctttgtaatcaac 716
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>gb|AC110917.11| Mus musculus, clone RP23-155I20, complete sequence
          Length = 193005

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   aagcaacgaacaatattttg 343
             ||||||||||||||||||||
Sbjct: 43549 aagcaacgaacaatattttg 43568
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>emb|AL591394.11| Human DNA sequence from clone RP11-1145B22 on chromosome Xp11.21-11.23
             Contains part of the gene for a novel zinc finger protein,
             complete sequence
          Length = 46442

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   tccttctgggtcttaaattg 381
             ||||||||||||||||||||
Sbjct: 22333 tccttctgggtcttaaattg 22352
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>emb|Y12776.1|ATY12776 Arabidopsis thaliana DNA, 40 kb surrounding ACS1 locus
          Length = 38483

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 598  taaaattgtatacacttctcatgt 621
            ||||| ||||||||||||||||||
Sbjct: 5958 taaaaatgtatacacttctcatgt 5935
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>gb|AC174232.4| Mus musculus BAC clone RP24-66G1 from chromosome y, complete sequence
          Length = 196032

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 181494 aatgtgtttagcaatttgtatctt 181517
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>emb|AJ620212.1| TT virus ORF1 and ORF2, isolate tth6
          Length = 3740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  tgtgtcttgcattccacaag 178
            ||||||||||||||||||||
Sbjct: 1684 tgtgtcttgcattccacaag 1665
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>gb|AY678298.1| Lycopersicon esculentum clone 56B23 chromosome 6, genomic sequence
          Length = 198768

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   ccaatttctcttctcttttg 225
             ||||||||||||||||||||
Sbjct: 10579 ccaatttctcttctcttttg 10598



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  ccaatttctcttctcttttg 225
            ||||||||||||||||||||
Sbjct: 5651 ccaatttctcttctcttttg 5670
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>gb|AC132294.4| Mus musculus BAC clone RP24-324F17 from chromosome y, complete sequence
          Length = 174347

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 35522 aatgtgtttagcaatttgtatctt 35499
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>gb|AC174478.3| Mus musculus BAC clone RP24-72B9 from chromosome y, complete sequence
          Length = 186313

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 90527 aatgtgtttagcaatttgtatctt 90550
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>gb|AC182366.4| Mus musculus BAC clone RP24-360I14 from chromosome y, complete
            sequence
          Length = 154476

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 410  aatgtgtttagcaatctgtatctt 433
            ||||||||||||||| ||||||||
Sbjct: 4458 aatgtgtttagcaatttgtatctt 4435
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>gb|AC182454.2| Mus musculus BAC clone RP24-141G12 from chromosome y, complete sequence
          Length = 181595

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 128040 aatgtgtttagcaatttgtatctt 128063
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>gb|AC174641.3| Mus musculus BAC clone RP24-406C15 from chromosome y, complete sequence
          Length = 174265

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 120874 aatgtgtttagcaatttgtatctt 120851
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>gb|AC144648.3| Mus musculus BAC clone RP24-318J19 from chromosome y, complete sequence
          Length = 162911

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 136485 aatgtgtttagcaatttgtatctt 136508
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>gb|AC060761.10| Mus musculus chromosome 17, clone RP23-218D19, complete sequence
          Length = 228922

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   gtgtgtgtgtcttgcattcc 173
             ||||||||||||||||||||
Sbjct: 38639 gtgtgtgtgtcttgcattcc 38658
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>gb|DP000007.1| Gopherus agassizii target 1 genomic scaffold
          Length = 183005

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   ttgccttgtttataaaatat 134
             ||||||||||||||||||||
Sbjct: 57749 ttgccttgtttataaaatat 57730
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>gb|AC009077.7|AC009077 Homo sapiens chromosome 16 clone RP11-331B16, complete sequence
          Length = 185167

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   tgacagccaatttctcttct 219
             ||||||||||||||||||||
Sbjct: 38334 tgacagccaatttctcttct 38315
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>gb|AC175461.3| Mus musculus BAC clone RP24-64J17 from chromosome y, complete sequence
          Length = 219754

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 211272 aatgtgtttagcaatttgtatctt 211249
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>gb|AC175710.2| Mus musculus BAC clone RP24-44O16 from chromosome y, complete sequence
          Length = 185928

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 155277 aatgtgtttagcaatttgtatctt 155254
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>gb|AC007599.6| Homo sapiens chromosome 16 clone RP11-177N22, complete sequence
          Length = 182101

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 596    tataaaattgtatacacttctcat 619
              |||||||| |||||||||||||||
Sbjct: 155475 tataaaatggtatacacttctcat 155498
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>gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, complete sequence
          Length = 191594

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tgacagccaatttctcttct 219
             ||||||||||||||||||||
Sbjct: 58195 tgacagccaatttctcttct 58214
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>gb|AC173708.4| Mus musculus BAC clone RP24-140O8 from chromosome y, complete sequence
          Length = 165998

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 110637 aatgtgtttagcaatttgtatctt 110614
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>gb|AC012305.7| Homo sapiens BAC clone RP11-84G18 from 2, complete sequence
          Length = 190385

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   ctttgtgaagcttgctccaa 482
             ||||||||||||||||||||
Sbjct: 57655 ctttgtgaagcttgctccaa 57636
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>gb|AC175033.2| Mus musculus BAC clone RP24-283I7 from chromosome y, complete sequence
          Length = 153678

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 115315 aatgtgtttagcaatttgtatctt 115292
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>gb|AC141474.4| Mus musculus BAC clone RP24-192L11 from chromosome y, complete sequence
          Length = 178464

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 129460 aatgtgtttagcaatttgtatctt 129437
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>gb|AC061957.3|F22L4 Sequence of BAC F22L4 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 66131

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 598   taaaattgtatacacttctcatgt 621
             ||||| ||||||||||||||||||
Sbjct: 31577 taaaaatgtatacacttctcatgt 31600
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>gb|AC009526.4|AC009526 Arabidopsis thaliana chromosome I BAC F2J6 genomic sequence, complete
             sequence
          Length = 108061

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   ttagcaatctgtatcttctcctta 440
             ||||||| ||||||||||||||||
Sbjct: 47480 ttagcaagctgtatcttctcctta 47503
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>gb|AC007533.2|AC007533 Homo sapiens chromosome 16 clone RPCI-11_474B12, complete sequence
          Length = 153053

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 596   tataaaattgtatacacttctcat 619
             |||||||| |||||||||||||||
Sbjct: 19106 tataaaatggtatacacttctcat 19129
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>gb|AC145585.4| Mus musculus BAC clone RP24-167E2 from Y, complete sequence
          Length = 156839

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             ||||||||||||||| ||||||||
Sbjct: 84361 aatgtgtttagcaatttgtatctt 84338
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>gb|AC145579.4| Mus musculus BAC clone RP24-371G22 from Y, complete sequence
          Length = 174048

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 125607 aatgtgtttagcaatttgtatctt 125630
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>gb|AC004031.1|AC004031 Homo sapiens 12q24 PAC RPCI1-261P5 (Roswell Park Cancer Institute
            Human PAC library) complete sequence
          Length = 74507

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  ccacaagcattcattcttaa 191
            ||||||||||||||||||||
Sbjct: 7830 ccacaagcattcattcttaa 7849
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>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence
          Length = 262831

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aatgtgtttagcaatctgtatctt 433
              ||||||||||||||| ||||||||
Sbjct: 168108 aatgtgtttagcaatttgtatctt 168131
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>emb|AL627183.16| Mouse DNA sequence from clone RP23-345H2 on chromosome 4, complete
             sequence
          Length = 216153

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aatgtgtttagcaatctgtatctt 433
             |||||||||||||| |||||||||
Sbjct: 96117 aatgtgtttagcaaactgtatctt 96140
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>emb|AL845262.3| Mouse DNA sequence from clone RP23-14N22 on chromosome 2, complete
              sequence
          Length = 207718

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    gtgtgtgtgtcttgcattcc 173
              ||||||||||||||||||||
Sbjct: 170585 gtgtgtgtgtcttgcattcc 170566
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>dbj|AB036933.1| Arabidopsis thaliana AtHDC gene for histidine decarboxylase,
           complete cds
          Length = 3564

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 417 ttagcaatctgtatcttctcctta 440
           ||||||| ||||||||||||||||
Sbjct: 777 ttagcaagctgtatcttctcctta 754
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>emb|AL670670.7| Mouse DNA sequence from clone RP23-234O7 on chromosome X, complete
            sequence
          Length = 91811

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 547  aagtatcaaaagtgtattgc 566
            ||||||||||||||||||||
Sbjct: 7528 aagtatcaaaagtgtattgc 7547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,745,498
Number of Sequences: 3902068
Number of extensions: 6745498
Number of successful extensions: 133469
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133317
Number of HSP's gapped (non-prelim): 152
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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