>dbj|AK064856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H11, full
            insert sequence
          Length = 1588

 Score =  115 bits (58), Expect = 5e-23
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                        
Query: 51   gatcaaaatgagtgccattttcatccctgatcattcnccttttcaaaccatttttatgtg 110
            |||||||||||||  |||||||||| |||||||||| |||||||| ||||||||||||||
Sbjct: 1230 gatcaaaatgagtatcattttcatctctgatcattcgccttttcagaccatttttatgtg 1171

                                       
Query: 111  atccggnaattgcccatangcaaccat 137
            |||| | ||||||||||| ||||||||
Sbjct: 1170 atccaggaattgcccataggcaaccat 1144

>ref|XM_469483.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1102

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 51  gatcaaaatgagtgccattttcatccctgatcattcnccttttcaaaccatttttatgtg 110
           |||||||||||||  |  ||||||| |||||||||| ||||||||  |||||||||||||
Sbjct: 674 gatcaaaatgagtatcgatttcatctctgatcattcgccttttcaggccatttttatgtg 615

                                      
Query: 111 atccggnaattgcccatangcaaccat 137
           |||| | ||||||||| | ||||||||
Sbjct: 614 atccaggaattgcccaaaggcaaccat 588

>dbj|AK104750.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F05, full
           insert sequence
          Length = 1089

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 51  gatcaaaatgagtgccattttcatccctgatcattcnccttttcaaaccatttttatgtg 110
           |||||||||||||  |  ||||||| |||||||||| ||||||||  |||||||||||||
Sbjct: 656 gatcaaaatgagtatcgatttcatctctgatcattcgccttttcaggccatttttatgtg 597

                                      
Query: 111 atccggnaattgcccatangcaaccat 137
           |||| | ||||||||| | ||||||||
Sbjct: 596 atccaggaattgcccaaaggcaaccat 570

>dbj|AK103821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147H12, full
           insert sequence
          Length = 1230

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 51  gatcaaaatgagtgccattttcatccctgatcattcnccttttcaaaccatttttatgtg 110
           |||||||||||||  |  ||||||| |||||||||| ||||||||  |||||||||||||
Sbjct: 687 gatcaaaatgagtatcgatttcatctctgatcattcgccttttcaggccatttttatgtg 628

                                      
Query: 111 atccggnaattgcccatangcaaccat 137
           |||| | ||||||||| | ||||||||
Sbjct: 627 atccaggaattgcccaaaggcaaccat 601

>dbj|AK060138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E10, full
           insert sequence
          Length = 1089

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 51  gatcaaaatgagtgccattttcatccctgatcattcnccttttcaaaccatttttatgtg 110
           |||||||||||||  |  ||||||| |||||||||| ||||||||  |||||||||||||
Sbjct: 656 gatcaaaatgagtatcgatttcatctctgatcattcgccttttcaggccatttttatgtg 597

                                      
Query: 111 atccggnaattgcccatangcaaccat 137
           |||| | ||||||||| | ||||||||
Sbjct: 596 atccaggaattgcccaaaggcaaccat 570

>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 51    gatcaaaatgagtgccattttcatccctgatcattcnccttttcaaaccat 101
             |||||||||||||  |||||||||| |||||||||| |||||||| |||||
Sbjct: 61168 gatcaaaatgagtatcattttcatctctgatcattcgccttttcagaccat 61218



 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 102   ttttatgtgatccggnaattgcccatangcaaccat 137
             ||||||||||||| | ||||||||||| ||||||||
Sbjct: 61312 ttttatgtgatccaggaattgcccataggcaaccat 61347

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 51       gatcaaaatgagtgccattttcatccctgatcattcnccttttcaaaccat 101
                |||||||||||||  |||||||||| |||||||||| |||||||| |||||
Sbjct: 23129393 gatcaaaatgagtatcattttcatctctgatcattcgccttttcagaccat 23129443



 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 102      ttttatgtgatccggnaattgcccatangcaaccat 137
                ||||||||||||| | ||||||||||| ||||||||
Sbjct: 23129537 ttttatgtgatccaggaattgcccataggcaaccat 23129572

>gb|AY112156.1| Zea mays CL1582_10 mRNA sequence
          Length = 891

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 7   ttccagtggtacaaactctttctgatcataaagcggggagggacgatcaaaatgagtgcc 66
           |||||| |||||||| |||||||| |||||    |||||||| | ||||||||| || ||
Sbjct: 507 ttccagcggtacaaattctttctggtcataggctggggaggggcaatcaaaatgtgtacc 566

                             
Query: 67  attttcatccctgatcat 84
           ||||||||| ||||||||
Sbjct: 567 attttcatctctgatcat 584

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 102      ttttatgtgatccggnaattgcccatangcaaccat 137
                ||||||||||||| | ||||||||| | ||||||||
Sbjct: 28258554 ttttatgtgatccaggaattgcccaaaggcaaccat 28258589



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 51       gatcaaaatgagtgccattttcatccctgatcattcnccttttca 95
                |||||||||||||  |  ||||||| |||||||||| ||||||||
Sbjct: 28258410 gatcaaaatgagtatcgatttcatctctgatcattcgccttttca 28258454

>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
              sequence
          Length = 122497

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 102    ttttatgtgatccggnaattgcccatangcaaccat 137
              ||||||||||||| | ||||||||| | ||||||||
Sbjct: 109695 ttttatgtgatccaggaattgcccaaaggcaaccat 109730



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 51     gatcaaaatgagtgccattttcatccctgatcattcnccttttca 95
              |||||||||||||  |  ||||||| |||||||||| ||||||||
Sbjct: 109551 gatcaaaatgagtatcgatttcatctctgatcattcgccttttca 109595

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 102      ttttatgtgatccggnaattgcccatangcaaccat 137
                ||||||||||||| | ||||||||| | ||||||||
Sbjct: 28349878 ttttatgtgatccaggaattgcccaaaggcaaccat 28349913



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 51       gatcaaaatgagtgccattttcatccctgatcattcnccttttca 95
                |||||||||||||  |  ||||||| |||||||||| ||||||||
Sbjct: 28349734 gatcaaaatgagtatcgatttcatctctgatcattcgccttttca 28349778

>emb|AL031650.22|HS1018D12 Human DNA sequence from clone RP5-1018D12 on chromosome 20q11.1-11.22
            Contains part of a CDK5 regulatory subunit associated
            protein 3 (CDK5RAP3) pseudogene, the RPL31P3 gene for
            ribosomal protein L31 pseudogene 3, a novel pseudogene,
            the DEFB118 gene for defensin beta 118 and the 3' end of
            the the DEFB119 gene for defensin beta 119, complete
            sequence
          Length = 98490

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   aatgagtgccattttcatccc 77
            |||||||||||||||||||||
Sbjct: 1187 aatgagtgccattttcatccc 1167

>emb|AL445066.1|TACID4 Thermoplasma acidophilum complete genome; segment 4/5
          Length = 297750

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    gccattttcatccctgatca 83
             ||||||||||||||||||||
Sbjct: 65957 gccattttcatccctgatca 65938

>gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete sequence
          Length = 124189

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    aactctttctgatcataaag 39
             ||||||||||||||||||||
Sbjct: 68260 aactctttctgatcataaag 68241

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 22       ctctttctgatcataaagcg 41
                ||||||||||||||||||||
Sbjct: 24356809 ctctttctgatcataaagcg 24356828

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 94       caaaccatttttatgtgatc 113
                ||||||||||||||||||||
Sbjct: 27367568 caaaccatttttatgtgatc 27367587

>gb|AC138123.2| Homo sapiens 12 BAC RP11-202G11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 107706

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ccagtggtacaaactctttc 28
             ||||||||||||||||||||
Sbjct: 68467 ccagtggtacaaactctttc 68486

>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    caaaccatttttatgtgatc 113
             ||||||||||||||||||||
Sbjct: 69095 caaaccatttttatgtgatc 69114

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 22       ctctttctgatcataaagcg 41
                ||||||||||||||||||||
Sbjct: 24285015 ctctttctgatcataaagcg 24285034

>emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058_H10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103803

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ctctttctgatcataaagcg 41
             ||||||||||||||||||||
Sbjct: 20341 ctctttctgatcataaagcg 20360

>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 135793

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     ctctttctgatcataaagcg 41
              ||||||||||||||||||||
Sbjct: 133583 ctctttctgatcataaagcg 133602

>emb|CR855369.3| Chicken DNA sequence from clone WAG-89C18, complete sequence
          Length = 112938

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     tgagtgccattttcatccc 77
              |||||||||||||||||||
Sbjct: 106343 tgagtgccattttcatccc 106325

>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence
          Length = 115385

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 93    tcaaaccatttttatgtga 111
             |||||||||||||||||||
Sbjct: 98630 tcaaaccatttttatgtga 98648

>gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complete sequence
          Length = 79804

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 93    tcaaaccatttttatgtga 111
             |||||||||||||||||||
Sbjct: 12039 tcaaaccatttttatgtga 12057

>gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, complete sequence
          Length = 227506

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    cttttcaaaccatttttat 107
             |||||||||||||||||||
Sbjct: 36491 cttttcaaaccatttttat 36473

>gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, complete sequence
          Length = 203493

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 89     cttttcaaaccatttttat 107
              |||||||||||||||||||
Sbjct: 106952 cttttcaaaccatttttat 106970

>gb|AC123530.4| Mus musculus BAC clone RP24-194D2 from chromosome 10, complete sequence
          Length = 164420

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    tcaaaatgagtgccatttt 71
             |||||||||||||||||||
Sbjct: 62198 tcaaaatgagtgccatttt 62216

>dbj|AB106563.1| Ulva pertusa act gene for actin, complete cds
          Length = 12048

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 56   aaatgagtgccattttcat 74
            |||||||||||||||||||
Sbjct: 5494 aaatgagtgccattttcat 5512

>gb|U37521.1|SSU37521 Sus scrofa E-selectin gene, complete cds
          Length = 9906

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    tttcatttccagtggtaca 19
            |||||||||||||||||||
Sbjct: 5534 tttcatttccagtggtaca 5552

>dbj|AP007300.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29K22, TM0275,
             complete sequence
          Length = 104570

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    caaaccatttttatgtgat 112
             |||||||||||||||||||
Sbjct: 54694 caaaccatttttatgtgat 54676


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,138,449
Number of Sequences: 3902068
Number of extensions: 1138449
Number of successful extensions: 73611
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73375
Number of HSP's gapped (non-prelim): 236
length of query: 183
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 161
effective length of database: 17,147,199,772
effective search space: 2760699163292
effective search space used: 2760699163292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)