>CHAC_ECOLI (P39163) Cation transport protein chaC|
          Length = 231

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = -1

Query: 499 IATASGPNGYNRDYLFSMEKALSNISHEDDSIIVLADEVRKVLGRS 362
           IA ASGP G N  YLFS+E+ L  +  +DD +  L   V+K+L  +
Sbjct: 175 IAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAEN 220

>VG20_BPT4 (P13334) Structural protein of head (Tail tube protein Gp20)|
          Length = 524

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 329 WYVGAGNLLLCRPAQHLPHLIRKHNDRVVFMAYIGQ 436
           WYV  GN+   + A+H+ H++    +RVV+ A  G+
Sbjct: 285 WYVDTGNMPARKAAEHMQHVMNTMKNRVVYDASTGK 320

>DCE2_HUMAN (Q05329) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic
           acid decarboxylase)
          Length = 585

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 270 FQHSKKSGMAGLAKQMAFSSDHTHS*HSPIERSAVYFGSGT 148
           F   K+ GMA L + +AF+S+H+   H  +++ A   G GT
Sbjct: 259 FPEVKEKGMAALPRLIAFTSEHS---HFSLKKGAAALGIGT 296

>DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa protein|
           downstream of CRK) (DOCK180) (Fragments)
          Length = 1027

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 186 ENVKSEYGQRKMPS-VSLIQPCRSSCYVETATVPSGRAEMCTAGVCDFNGTSEP 344
           E V+ +YG R MPS +   +  R    V + T+PS    +  A V  F+  S P
Sbjct: 768 EKVEKQYGVRTMPSGLDDRRGSRPRSMVRSFTMPSSSRPLSVASVSSFSSDSTP 821

>DCE2_RAT (Q05683) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic
           acid decarboxylase)
          Length = 585

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 270 FQHSKKSGMAGLAKQMAFSSDHTHS*HSPIERSAVYFGSGT 148
           F   K+ GMA + + +AF+S+H+   H  +++ A   G GT
Sbjct: 259 FPEVKEKGMAAVPRLIAFTSEHS---HFSLKKGAAALGIGT 296

>DCE2_PIG (P48321) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic
           acid decarboxylase)
          Length = 585

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 270 FQHSKKSGMAGLAKQMAFSSDHTHS*HSPIERSAVYFGSGT 148
           F   K+ GMA + + +AF+S+H+   H  +++ A   G GT
Sbjct: 259 FPEVKEKGMAAVPRLIAFTSEHS---HFSLKKGAAALGIGT 296

>DCE2_MOUSE (P48320) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic
           acid decarboxylase)
          Length = 585

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 270 FQHSKKSGMAGLAKQMAFSSDHTHS*HSPIERSAVYFGSGT 148
           F   K+ GMA + + +AF+S+H+   H  +++ A   G GT
Sbjct: 259 FPEVKEKGMAAVPRLIAFTSEHS---HFSLKKGAAALGIGT 296

>DCE2_CANFA (Q4PRC2) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate|
           decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic
           acid decarboxylase)
          Length = 585

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 270 FQHSKKSGMAGLAKQMAFSSDHTHS*HSPIERSAVYFGSGT 148
           F   K+ GMA + + +AF+S+H+   H  +++ A   G GT
Sbjct: 259 FPEVKEKGMAAVPRLIAFTSEHS---HFSLKKGAAALGIGT 296

>VATI1_TREPA (O83444) V-type ATP synthase subunit I 1 (EC 3.6.3.14) (V-type|
           ATPase subunit I 1)
          Length = 622

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 368 AQHLPHLIRKHNDRVVFMAYIGQCLLH*EQVVP 466
           A+ +  ++R H+DRV     I QC+ H E+  P
Sbjct: 83  AEAVEQIVRTHSDRVELAQRIAQCIAHLERCEP 115

>PGK_HELHP (Q7VJB6) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 402

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
 Frame = -1

Query: 454 FSMEKALSNISHEDDSIIVLADEVRKVLGRSTEKK---------VTGSDVPLKSHTPAVH 302
           F M+K+L     EDD    L  E RK+L ++ EKK         V+  D+    H     
Sbjct: 240 FDMQKSLV----EDD----LVSEARKILDKAKEKKVKIYLPVDVVSTDDIKEHRHIKITP 291

Query: 301 ISALPEGTVAV 269
              +PEG +AV
Sbjct: 292 AQDIPEGFMAV 302


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,287,209
Number of Sequences: 219361
Number of extensions: 1319937
Number of successful extensions: 3023
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3023
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)