ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16j07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465531.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
2ref|XM_507481.1| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
3ref|XM_507480.1| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
4ref|XM_507479.1| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
5ref|XM_507478.1| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
6ref|XM_507477.1| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
7ref|XM_507476.1| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
8ref|XM_506800.2| PREDICTED Oryza sativa (japonica cultivar-group... 111 2e-21
9dbj|AB112061.1| Oryza sativa (indica cultivar-group) OsCTP gene,... 111 2e-21
10dbj|AK119187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
11dbj|AK104516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
12dbj|AK104503.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
13dbj|AK104351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
14dbj|AK104241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
15dbj|AK104223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
16dbj|AK104187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
17dbj|AK071205.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
19dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
20gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete seq... 44 0.44
21emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c1... 44 0.44
22gb|AC148004.3| Mus musculus BAC clone RP23-352J18 from chromosom... 42 1.7
23gb|AC117191.4| Mus musculus BAC clone RP23-58O15 from 18, comple... 42 1.7
24emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in... 42 1.7
25gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 42 1.7
26dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.7
27emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chr... 42 1.7
28ref|NM_191437.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
29ref|XM_415711.1| PREDICTED: Gallus gallus similar to huntingtin ... 40 6.8
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.8
31gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome... 40 6.8
32gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosom... 40 6.8
33gb|AC117248.3| Mus musculus BAC clone RP24-345A14 from chromosom... 40 6.8
34emb|CR931814.13| Zebrafish DNA sequence from clone DKEY-236E8 in... 40 6.8
35gb|AC068467.7| Homo sapiens chromosome 8, clone RP11-643F5, comp... 40 6.8
36emb|BX088597.18| Zebrafish DNA sequence from clone DKEY-171P23 i... 40 6.8
37gb|AC104249.7| Homo sapiens chromosome 11, clone RP11-1084A14, c... 40 6.8
38gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, co... 40 6.8
39dbj|AK122911.1| Homo sapiens cDNA FLJ16588 fis, clone TESTI40010... 40 6.8
40gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand ... 40 6.8
41gb|AC120570.5| Rattus norvegicus 1 BAC CH230-96N8 (Children's Ho... 40 6.8
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
43emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chr... 40 6.8
44gb|AC107613.15| Homo sapiens X BAC RP11-501H19 (Roswell Park Can... 40 6.8
45gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 40 6.8
46gb|AC117498.6| Homo sapiens 12 BAC RP11-579D7 (Roswell Park Canc... 40 6.8
47dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 6.8
48emb|BX001023.12| Zebrafish DNA sequence from clone CH211-233F10 ... 40 6.8
49gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, co... 40 6.8 
>ref|XM_465531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1103

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgcct 627
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>ref|XM_507481.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1112

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 723 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 664

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 663 ccattggggccattggctgtagcaatttgcct 632
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>ref|XM_507480.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1110

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgcct 627
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>ref|XM_507479.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1110

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgcct 627
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>ref|XM_507478.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1115

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 723 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 664

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 663 ccattggggccattggctgtagcaatttgcct 632
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>ref|XM_507477.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1116

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 724 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 665

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 664 ccattggggccattggctgtagcaatttgcct 633
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>ref|XM_507476.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1114

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 720 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 661

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 660 ccattggggccattggctgtagcaatttgcct 629
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>ref|XM_506800.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1130

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 725 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 666

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 665 ccattggggccattggctgtagcaatttgcct 634
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>dbj|AB112061.1| Oryza sativa (indica cultivar-group) OsCTP gene, complete cds
          Length = 741

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 316 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 257

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 256 ccattggggccattggctgtagcaatttgcct 225
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>dbj|AK119187.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G07, full
           insert sequence
          Length = 1110

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgcct 627
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>dbj|AK104516.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C03, full
           insert sequence
          Length = 1115

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 723 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 664

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 663 ccattggggccattggctgtagcaatttgcct 632
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>dbj|AK104503.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F05, full
           insert sequence
          Length = 1110

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgcct 627
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>dbj|AK104351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G09, full
           insert sequence
          Length = 1114

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 720 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 661

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 660 ccattggggccattggctgtagcaatttgcct 629
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>dbj|AK104241.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B07, full
           insert sequence
          Length = 1112

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 723 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 664

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 663 ccattggggccattggctgtagcaatttgcct 632
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>dbj|AK104223.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E10, full
           insert sequence
          Length = 1114

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 722 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 663

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 662 ccattggggccattggctgtagcaatttgcct 631
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>dbj|AK104187.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G08, full
           insert sequence
          Length = 1103

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgcct 627
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>dbj|AK071205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085D08, full
           insert sequence
          Length = 1130

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 414 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 473
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 725 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 666

                                           
Query: 474 ccattagggccactggctgtagcaatttgcct 505
           ||||| |||||| |||||||||||||||||||
Sbjct: 665 ccattggggccattggctgtagcaatttgcct 634
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                            
Query: 429      ttggacagtgccttctccattgagaacaggtagtccctattatatccattagggccactg 488
                ||||||| |||||||||||||||||||||||| ||||| ||||  ||||| |||||| ||
Sbjct: 15776747 ttggacaatgccttctccattgagaacaggtaatccctgttattcccattggggccattg 15776806

                                 
Query: 489      gctgtagcaatttgcct 505
                |||||||||||||||||
Sbjct: 15776807 gctgtagcaatttgcct 15776823
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>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1342_D02
          Length = 125460

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 429   ttggacagtgccttctccattgagaacaggtagtccctattatatccattagggccactg 488
             ||||||| |||||||||||||||||||||||| ||||| ||||  ||||| |||||| ||
Sbjct: 34687 ttggacaatgccttctccattgagaacaggtaatccctgttattcccattggggccattg 34746

                              
Query: 489   gctgtagcaatttgcct 505
             |||||||||||||||||
Sbjct: 34747 gctgtagcaatttgcct 34763
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>gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete sequence
          Length = 92738

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 37    attattaagggaagcaataaca 58
             ||||||||||||||||||||||
Sbjct: 31125 attattaagggaagcaataaca 31104
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>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE
          Length = 136068

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 37     attattaagggaagcaataaca 58
              ||||||||||||||||||||||
Sbjct: 108220 attattaagggaagcaataaca 108199
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>gb|AC148004.3| Mus musculus BAC clone RP23-352J18 from chromosome 18, complete
             sequence
          Length = 206275

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   aagaaaattagcacacaccct 143
             |||||||||||||||||||||
Sbjct: 86610 aagaaaattagcacacaccct 86630
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>gb|AC117191.4| Mus musculus BAC clone RP23-58O15 from 18, complete sequence
          Length = 149461

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   aagaaaattagcacacaccct 143
             |||||||||||||||||||||
Sbjct: 11764 aagaaaattagcacacaccct 11784
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>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14,
             complete sequence
          Length = 160671

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   tgccaaagaaaattagcacac 138
             |||||||||||||||||||||
Sbjct: 80647 tgccaaagaaaattagcacac 80667
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>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
             sequence
          Length = 173386

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 434   cagtgccttctccattgagaa 454
             |||||||||||||||||||||
Sbjct: 85782 cagtgccttctccattgagaa 85802
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 334     cgtcggagccggtaaccttcttctc 358
               ||||||||||||| |||||||||||
Sbjct: 1270477 cgtcggagccggtcaccttcttctc 1270453



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     cgacctgcccagcaccttcc 381
               ||||||||||||||||||||
Sbjct: 1530479 cgacctgcccagcaccttcc 1530498
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>emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chromosome 11, complete
             sequence
          Length = 76047

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 434   cagtgccttctccattgagaa 454
             |||||||||||||||||||||
Sbjct: 28524 cagtgccttctccattgagaa 28544
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>ref|NM_191437.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 990

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 380 cctcacctcatccgcaagca 399
           ||||||||||||||||||||
Sbjct: 166 cctcacctcatccgcaagca 185
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>ref|XM_415711.1| PREDICTED: Gallus gallus similar to huntingtin interacting protein
           1 (LOC417463), mRNA
          Length = 7071

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 gcccagcaccttcctcacct 387
           ||||||||||||||||||||
Sbjct: 721 gcccagcaccttcctcacct 702
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      ttgccaaagaaaattagcac 136
                ||||||||||||||||||||
Sbjct: 34130858 ttgccaaagaaaattagcac 34130839
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>gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome 9, complete sequence
          Length = 245088

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 66    tctcaggctttcgcattagcactc 89
             |||||||||||| |||||||||||
Sbjct: 22520 tctcaggctttcccattagcactc 22497
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>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence
          Length = 152908

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 1      gcagcacagnaagtgctgaagtc 23
              ||||||||| |||||||||||||
Sbjct: 131361 gcagcacaggaagtgctgaagtc 131383
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>gb|AC117248.3| Mus musculus BAC clone RP24-345A14 from chromosome 9, complete sequence
          Length = 185810

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 66    tctcaggctttcgcattagcactc 89
             |||||||||||| |||||||||||
Sbjct: 73038 tctcaggctttcccattagcactc 73061
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>emb|CR931814.13| Zebrafish DNA sequence from clone DKEY-236E8 in linkage group 5, complete
              sequence
          Length = 155089

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     gccaaatgcatttattatta 43
              ||||||||||||||||||||
Sbjct: 131517 gccaaatgcatttattatta 131498
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>gb|AC068467.7| Homo sapiens chromosome 8, clone RP11-643F5, complete sequence
          Length = 185895

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  aatagttgccaaagaaaatt 131
            ||||||||||||||||||||
Sbjct: 9186 aatagttgccaaagaaaatt 9205
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>emb|BX088597.18| Zebrafish DNA sequence from clone DKEY-171P23 in linkage group 5,
              complete sequence
          Length = 172098

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     gccaaatgcatttattatta 43
              ||||||||||||||||||||
Sbjct: 161916 gccaaatgcatttattatta 161897
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>gb|AC104249.7| Homo sapiens chromosome 11, clone RP11-1084A14, complete sequence
          Length = 171265

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   agagatgtgcacagctggag 315
             ||||||||||||||||||||
Sbjct: 39723 agagatgtgcacagctggag 39742
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>gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, complete sequence
          Length = 176485

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   agagatgtgcacagctggag 315
             ||||||||||||||||||||
Sbjct: 37857 agagatgtgcacagctggag 37838
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>dbj|AK122911.1| Homo sapiens cDNA FLJ16588 fis, clone TESTI4001036, highly  similar
            to Dihydropyridine-sensitive L-type, calcium channel
            beta-3 subunit
          Length = 4029

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  cctgcccagcaccttcctca 384
            ||||||||||||||||||||
Sbjct: 1071 cctgcccagcaccttcctca 1052
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>gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand 1, SCYA4, chemokine
             K203, and chemokine ah294 genes, complete cds
          Length = 112034

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   gcccagcaccttcctcacct 387
             ||||||||||||||||||||
Sbjct: 14416 gcccagcaccttcctcacct 14435
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>gb|AC120570.5| Rattus norvegicus 1 BAC CH230-96N8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227607

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     caaatgcatttattattaag 45
              ||||||||||||||||||||
Sbjct: 130692 caaatgcatttattattaag 130711
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      ttgccaaagaaaattagcac 136
                ||||||||||||||||||||
Sbjct: 34221330 ttgccaaagaaaattagcac 34221311
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>emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chromosome 4, complete
             sequence
          Length = 210141

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   gtcagaggaaaatgccatct 227
             ||||||||||||||||||||
Sbjct: 32569 gtcagaggaaaatgccatct 32588
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>gb|AC107613.15| Homo sapiens X BAC RP11-501H19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132501

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    aagtcgccaaatgcatttattatt 42
             |||| |||||||||||||||||||
Sbjct: 23311 aagttgccaaatgcatttattatt 23334
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   ttgccaaagaaaattagcac 136
             ||||||||||||||||||||
Sbjct: 94670 ttgccaaagaaaattagcac 94651
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>gb|AC117498.6| Homo sapiens 12 BAC RP11-579D7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144383

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   cctgcccagcaccttcctca 384
             ||||||||||||||||||||
Sbjct: 72530 cctgcccagcaccttcctca 72549
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 483    ccactggctgtagcaatttg 502
              ||||||||||||||||||||
Sbjct: 770330 ccactggctgtagcaatttg 770349
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>emb|BX001023.12| Zebrafish DNA sequence from clone CH211-233F10 in linkage group 5,
           complete sequence
          Length = 168064

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 24  gccaaatgcatttattatta 43
           ||||||||||||||||||||
Sbjct: 930 gccaaatgcatttattatta 949
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>gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, complete sequence
          Length = 182926

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   tccagccatgccgctcttct 257
             ||||||||||||||||||||
Sbjct: 89307 tccagccatgccgctcttct 89326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,486,760
Number of Sequences: 3902068
Number of extensions: 4486760
Number of successful extensions: 108567
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108395
Number of HSP's gapped (non-prelim): 172
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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