>DCN1L_DROME (Q9VUQ8) DCN1-like protein (Defective in cullin neddylation protein|
           1-like protein)
          Length = 288

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEYLTEN 381
           DTW  LL+F   ID  +SNYD EGAWP LID+FVE+  EN
Sbjct: 207 DTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEWCQEN 246

>DCNL2_MOUSE (Q8BZJ7) DCN1-like protein 2 (Defective in cullin neddylation|
           protein 2-like protein 2) (DCUN1 domain-containing
           protein 2)
          Length = 258

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEY 393
           DTW  LL+F   I  +LSNYDEEGAWP LID+FVEY
Sbjct: 210 DTWNLLLDFGNMIADDLSNYDEEGAWPVLIDDFVEY 245

>DCNL2_HUMAN (Q6PH85) DCN1-like protein 2 (Defective in cullin neddylation|
           protein 2-like protein 2) (DCUN1 domain-containing
           protein 2)
          Length = 259

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEY 393
           DTW  LL+F   I  ++SNYDEEGAWP LID+FVEY
Sbjct: 211 DTWNLLLDFGNMIADDMSNYDEEGAWPVLIDDFVEY 246

>DCNL4_BRARE (Q5RHX6) DCN1-like protein 4 (Defective in cullin neddylation|
           protein 1-like protein 4) (DCUN1 domain-containing
           protein 4)
          Length = 280

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEY 393
           D W  +LEF +TI+ +LSNYDE+GAWP L+DEFVE+
Sbjct: 238 DQWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEW 273

>DCNL4_HUMAN (Q92564) DCN1-like protein 4 (Defective in cullin neddylation|
           protein 1-like protein 4) (DCUN1 domain-containing
           protein 4)
          Length = 292

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEY 393
           D W  +LEF +TI+ +LSNYDE+GAWP L+DEFVE+
Sbjct: 250 DQWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEW 285

>DCNL4_MOUSE (Q8CCA0) DCN1-like protein 4 (Defective in cullin neddylation|
           protein 1-like protein 4) (DCUN1 domain-containing
           protein 4)
          Length = 292

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEY 393
           D W  +LEF +TI  +LSNYDE+GAWP L+DEFVE+
Sbjct: 250 DQWCNVLEFSRTISLDLSNYDEDGAWPVLLDEFVEW 285

>DCN1_CAEEL (Q9U3C8) Defective in cullin neddylation protein 1|
          Length = 295

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 22/40 (55%), Positives = 29/40 (72%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEYLTEN 381
           DTW    +F+    P+LS+YD+EGAWP LID+FV+Y  EN
Sbjct: 235 DTWNLFWDFILLSKPDLSDYDDEGAWPVLIDQFVDYCREN 274

>DCNL1_MOUSE (Q9QZ73) DCN1-like protein 1 (Defective in cullin neddylation|
           protein 1-like protein 1) (DCUN1 domain-containing
           protein 1) (Testis-specific protein 3)
          Length = 259

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEY 393
           DTW  LL+F   I  ++SNYDEEGAWP LID+FVE+
Sbjct: 211 DTWNLLLDFSSMIADDMSNYDEEGAWPVLIDDFVEF 246

>DCN1_CRYNE (Q5KHV1) Defective in cullin neddylation protein 1|
          Length = 279

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 21/39 (53%), Positives = 29/39 (74%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEYLTE 384
           DTW  L++F + ID +   YDE+GAWP +ID+FVEY+ E
Sbjct: 236 DTWALLVDFARGIDKDFKEYDEDGAWPSMIDDFVEYVRE 274

>DCNL1_HUMAN (Q96GG9) DCN1-like protein 1 (Defective in cullin neddylation|
           protein 1-like protein 1) (DCUN1 domain-containing
           protein 1) (Squamous cell carcinoma-related oncogene)
          Length = 259

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEY 393
           DTW  LL+F   I  ++SNYDEEGAWP LID+FVE+
Sbjct: 211 DTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEF 246

>DCNL1_CHICK (Q5ZKU1) DCN1-like protein 1 (Defective in cullin neddylation|
           protein 1-like protein 1) (DCUN1 domain-containing
           protein 1)
          Length = 259

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEY 393
           DTW  LL+F   I  ++SNYDEEGAWP LID+FVE+
Sbjct: 211 DTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEF 246

>DCN1_SCHPO (Q8WZK4) Defective in cullin neddylation protein 1|
          Length = 251

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = -3

Query: 500 DTWXQLLEFVKTI--DPELSNYDEEGAWPYLIDEFVEYLTENG 378
           DTW +L +F   +  DP  SNYD EGAWP LIDEFV Y  E+G
Sbjct: 203 DTWNELWDFSVFVKSDPNCSNYDFEGAWPTLIDEFVSYYREHG 245

>DCN1_CAEBR (Q60YT5) Defective in cullin neddylation protein 1|
          Length = 292

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEYLTEN 381
           DTW    +F+     +LS+YDEEGAWP LID+FV++  EN
Sbjct: 233 DTWNLFWDFIVLGKEDLSDYDEEGAWPVLIDQFVDHCREN 272

>DCN1_YARLI (Q6C0B6) Defective in cullin neddylation protein 1|
          Length = 240

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
 Frame = -3

Query: 500 DTWXQLLEFV--KTIDPELSNYDEEGAWPYLIDEFVEYLTE 384
           D W  L EF+  +  DP L +YDE+GAWP +IDE+VE+L E
Sbjct: 200 DAWNMLYEFMLFQAKDPSLESYDEDGAWPSVIDEYVEFLKE 240

>DCN1_USTMA (Q4PF67) Defective in cullin neddylation protein 1|
          Length = 319

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 19/40 (47%), Positives = 29/40 (72%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEYLTEN 381
           DTW Q L+F K I+ + SN+D + AWP +ID+FV ++ +N
Sbjct: 270 DTWMQFLDFTKEINSDFSNHDFDAAWPSIIDDFVLWVRDN 309

>DCN1_YEAST (Q12395) Defective in cullin neddylation protein 1|
          Length = 269

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = -3

Query: 500 DTWXQLLEFVK---TIDPELSNYDEEGAWPYLIDEFVEYLTE 384
           DTW  LL F K   TI   +S+YDE  AWP++IDEF E L +
Sbjct: 226 DTWRMLLLFFKRYPTIQKIISDYDETAAWPFIIDEFYECLQD 267

>DCN1_CANGA (Q6FJR2) Defective in cullin neddylation protein 1|
          Length = 273

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = -3

Query: 500 DTWXQLLEFVK---TIDPELSNYDEEGAWPYLIDEFVEYLTE 384
           DTW  LL F K   ++D   + Y+E  AWPY IDEF EYL E
Sbjct: 228 DTWQMLLLFFKKFPSLDAIKTEYNEADAWPYTIDEFYEYLEE 269

>DCN1_MAGGR (Q52DM9) Defective in cullin neddylation protein 1|
          Length = 281

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 500 DTWXQLLEFV--KTIDPELSNYDEEGAWPYLIDEFVEYLTENG 378
           D W Q L+F    T D  LS +  EG+WP +ID FVE+L   G
Sbjct: 228 DMWNQTLDFAVKSTADSTLSFWTPEGSWPSVIDGFVEWLRNKG 270

>DCN1_CANAL (Q5ADL9) Defective in cullin neddylation protein 1|
          Length = 304

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = -3

Query: 500 DTWXQLLEFVKTI---DP-ELSNYDEEGAWPYLIDEFVEYL 390
           D+W     F K I   DP +  +YDE  AWP ++DEF+EYL
Sbjct: 258 DSWSMFYLFFKEIVLIDPIKFKDYDEMAAWPSVVDEFLEYL 298

>DCN1_ASHGO (Q750Y3) Defective in cullin neddylation protein 1|
          Length = 256

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 500 DTWXQLLEFVKTIDPE---LSNYDEEGAWPYLIDEFVEYL 390
           DTW     F +    +   L +Y+E  +WP +IDE+ E++
Sbjct: 211 DTWDMFPRFAQRFPDDTELLEHYNELASWPLVIDEYYEWV 250

>FIBG_HUMAN (P02679) Fibrinogen gamma chain precursor|
          Length = 453

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
 Frame = -3

Query: 194 DFTG*DCK------LYQSGLYFVLPLSATAYPKHLLVYC*MGDGS 78
           D TG DC+        QSGLYF+ PL A    +  LVYC + DGS
Sbjct: 173 DITGKDCQDIANKGAKQSGLYFIKPLKAN---QQFLVYCEI-DGS 213

>FIBG_BOVIN (P12799) Fibrinogen gamma-B chain precursor (Gamma')|
          Length = 444

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
 Frame = -3

Query: 194 DFTG*DCK------LYQSGLYFVLPLSATAYPKHLLVYC*MGDGS 78
           D TG DC+        +SGLYF+ PL A    K  LVYC + DGS
Sbjct: 171 DVTGRDCQDVANKGAKESGLYFIRPLKA----KQFLVYCEI-DGS 210

>RPOB_BARQU (Q9KJM5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1383

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 3   PSCQQYDQYRYHKFALPHTWTCMNYRPIAH 92
           PS    D YR  KF   +  TC+N RP+ H
Sbjct: 756 PSKSGVDIYRLQKFQRSNQSTCINQRPLVH 785

>RPOB_BARHE (Q9KJG4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1383

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 3   PSCQQYDQYRYHKFALPHTWTCMNYRPIAH 92
           PS    D YR  KF   +  TC+N RP+ H
Sbjct: 756 PSKSGVDIYRLQKFQRSNQSTCINQRPLVH 785

>GR05A_DROME (Q9W497) Gustatory receptor for trehalose (Trehalose receptor)|
          Length = 444

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = -2

Query: 213 NLLAQG*FHWLGLQTLSIWFVFCAAPICYSLPKTLIGLLLNGRWVYSSCRSRYEVMRTCD 34
           N L  G FH      L++   FC  P+C     T  GL  N R    S R  Y  +  C 
Sbjct: 46  NFLHDGSFHEAVAPVLAVAQCFCLMPVCGISAPTYRGLSFNRR----SWRFWYSSLYLCS 101

Query: 33  IGID 22
             +D
Sbjct: 102 TSVD 105

>DCN1_EMENI (Q5AWS1) Defective in cullin neddylation protein 1|
          Length = 308

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 500 DTWXQLLEFVKTI--DPELSNYDEEGAWPYLIDEFVEYL 390
           D W Q+  F++    D     + E+GAWP  +D+FV ++
Sbjct: 258 DLWQQVEVFMRKTHEDEAFGWWSEDGAWPGTLDDFVAWV 296

>FIBG_MOUSE (Q8VCM7) Fibrinogen gamma chain precursor|
          Length = 436

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
 Frame = -3

Query: 194 DFTG*DCK------LYQSGLYFVLPLSATAYPKHLLVYC*MGDGS 78
           D TG DC+        +SGLYF+ PL A    +  LVYC + DGS
Sbjct: 172 DTTGKDCQEIANKGAKESGLYFIRPLKA---KQQFLVYCEI-DGS 212


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,912,680
Number of Sequences: 219361
Number of extensions: 1654972
Number of successful extensions: 3258
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3258
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)