>IRA2_YEAST (P19158) Inhibitory regulator protein IRA2|
          Length = 3079

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
 Frame = +1

Query: 310 HNHPS-----DGNTGHPLR---DQDEQEHLNQLRYALHVPLRQSKSVDHFQSH 444
           HNHPS     D   GH LR     +  E+   +R ++ VP+ Q+ +  H  SH
Sbjct: 229 HNHPSHCKMIDSTLGHILRFVAASNPSEYFEFIRKSVQVPVTQTHTHSHSHSH 281

>RP1_CANFA (Q8MJ04) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein|
            homolog)
          Length = 2141

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 292  VCTXRNHNHPSDGNTGHPLRDQDEQEHLNQLRYALHVPLRQSKSVD 429
            VCT   H   S GN  HP+ D   +     +  A+H  L++  S+D
Sbjct: 1863 VCTSVTHGFTSAGNKVHPVSDDTIKNQPLPVNNAIHGALQEGDSLD 1908

>HYPB_SYNY3 (P74218) Probable hydrogenase nickel incorporation protein hypB|
          Length = 285

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 280 GDAAVCT-XRNHNHPSDGNTGHPLRDQDEQEH 372
           G +AV T   +H+H  DGN  H   D D+QEH
Sbjct: 6   GCSAVGTVAHSHHHHGDGNFAHSHDDHDQQEH 37

>E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related protein E74A)|
          Length = 873

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 21/83 (25%), Positives = 33/83 (39%)
 Frame = +1

Query: 250 SELPAVHDSFGDAAVCTXRNHNHPSDGNTGHPLRDQDEQEHLNQLRYALHVPLRQSKSVD 429
           +E+P V  S   +     + H H          + Q +Q+HL Q +       +Q +   
Sbjct: 316 TEIPIVKQSTSPSPHQQQQQHQHQQQ-------QQQQQQQHLQQTQQQQQQQQQQQQQQQ 368

Query: 430 HFQSHXKAGXLVHIKRELSILKT 498
             Q    A  L+HIK E + L T
Sbjct: 369 QQQVFGSATTLLHIKTEQNALLT 391

>RHP42_SCHPO (P87235) DNA repair protein rhp42|
          Length = 686

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 13/55 (23%), Positives = 30/55 (54%)
 Frame = +1

Query: 349 RDQDEQEHLNQLRYALHVPLRQSKSVDHFQSHXKAGXLVHIKRELSILKTTARIR 513
           R++D ++   +      VP+R+ KS   F++H +   + H++RE ++L     ++
Sbjct: 423 RNKDAEDIYEEKELESKVPIREPKSFADFKNHPEFVLIRHLRREEALLPNAKPVK 477


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,067,774
Number of Sequences: 219361
Number of extensions: 1183961
Number of successful extensions: 2263
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2263
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)