>ref|NM_190260.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1278

 Score =  170 bits (86), Expect = 2e-39
 Identities = 137/153 (89%), Gaps = 6/153 (3%)
 Strand = Plus / Minus

                                                                        
Query: 203  agctcatcatggtagtcatc---ccagtgatccctgttgcgtcttttgtatctgtccttg 259
            ||||||||||||||||||||   |||||||||||| |  |||||||||||||||||||||
Sbjct: 1274 agctcatcatggtagtcatcatcccagtgatccctatgacgtcttttgtatctgtccttg 1215

                                                                        
Query: 260  tagtggtccctgccacggngtcgatcacccctctctctcctacgtcgctctccttcctcc 319
            || |   ||||||||||| | |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1214 taat---ccctgccacggtgccgatcacccctctctctcctccgtcgctctccttcctcc 1158

                                             
Query: 320  cttgcttgttgagcttccttatcttctctagct 352
            |||||| ||| |||||||||||| |||||||||
Sbjct: 1157 cttgctcgttcagcttccttatcctctctagct 1125

>dbj|AK099626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B02, full
            insert sequence
          Length = 1784

 Score =  170 bits (86), Expect = 2e-39
 Identities = 137/153 (89%), Gaps = 6/153 (3%)
 Strand = Plus / Minus

                                                                        
Query: 203  agctcatcatggtagtcatc---ccagtgatccctgttgcgtcttttgtatctgtccttg 259
            ||||||||||||||||||||   |||||||||||| |  |||||||||||||||||||||
Sbjct: 1414 agctcatcatggtagtcatcatcccagtgatccctatgacgtcttttgtatctgtccttg 1355

                                                                        
Query: 260  tagtggtccctgccacggngtcgatcacccctctctctcctacgtcgctctccttcctcc 319
            || |   ||||||||||| | |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1354 taat---ccctgccacggtgccgatcacccctctctctcctccgtcgctctccttcctcc 1298

                                             
Query: 320  cttgcttgttgagcttccttatcttctctagct 352
            |||||| ||| |||||||||||| |||||||||
Sbjct: 1297 cttgctcgttcagcttccttatcctctctagct 1265

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 2e-24
 Identities = 89/98 (90%), Gaps = 3/98 (3%)
 Strand = Plus / Plus

                                                                            
Query: 241      tcttttgtatctgtccttgtagtggtccctgccacggngtcgatcacccctctctctcct 300
                ||||||||||||||||||||| |   ||||||||||| | ||||||||||||||||||||
Sbjct: 38924737 tcttttgtatctgtccttgtaat---ccctgccacggtgccgatcacccctctctctcct 38924793

                                                      
Query: 301      acgtcgctctccttcctcccttgcttgttgagcttcct 338
                 |||||||||||||||||||||||| ||| ||||||||
Sbjct: 38924794 ccgtcgctctccttcctcccttgctcgttcagcttcct 38924831

>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1078G07
          Length = 199457

 Score =  121 bits (61), Expect = 2e-24
 Identities = 89/98 (90%), Gaps = 3/98 (3%)
 Strand = Plus / Plus

                                                                          
Query: 241    tcttttgtatctgtccttgtagtggtccctgccacggngtcgatcacccctctctctcct 300
              ||||||||||||||||||||| |   ||||||||||| | ||||||||||||||||||||
Sbjct: 197619 tcttttgtatctgtccttgtaat---ccctgccacggtgccgatcacccctctctctcct 197675

                                                    
Query: 301    acgtcgctctccttcctcccttgcttgttgagcttcct 338
               |||||||||||||||||||||||| ||| ||||||||
Sbjct: 197676 ccgtcgctctccttcctcccttgctcgttcagcttcct 197713

>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0696G06
          Length = 142571

 Score =  121 bits (61), Expect = 2e-24
 Identities = 89/98 (90%), Gaps = 3/98 (3%)
 Strand = Plus / Plus

                                                                         
Query: 241   tcttttgtatctgtccttgtagtggtccctgccacggngtcgatcacccctctctctcct 300
             ||||||||||||||||||||| |   ||||||||||| | ||||||||||||||||||||
Sbjct: 89523 tcttttgtatctgtccttgtaat---ccctgccacggtgccgatcacccctctctctcct 89579

                                                   
Query: 301   acgtcgctctccttcctcccttgcttgttgagcttcct 338
              |||||||||||||||||||||||| ||| ||||||||
Sbjct: 89580 ccgtcgctctccttcctcccttgctcgttcagcttcct 89617

>gb|AY105822.1| Zea mays PCO122996 mRNA sequence
          Length = 1660

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 203  agctcatcatggtagtcatcccagtgatccctgt 236
            ||||||||||||||||| ||||||||||| ||||
Sbjct: 1308 agctcatcatggtagtcgtcccagtgatctctgt 1275

>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE
          Length = 243542

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     aagtttttgacttttgagtt 33
              ||||||||||||||||||||
Sbjct: 209750 aagtttttgacttttgagtt 209731

>gb|AC124134.8| Mus musculus chromosome 12, clone RP23-235G12, complete sequence
          Length = 220574

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    ctctccttcctcccttgctt 326
              ||||||||||||||||||||
Sbjct: 182513 ctctccttcctcccttgctt 182494

>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence
          Length = 113836

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aagtttttgacttttgagtt 33
             ||||||||||||||||||||
Sbjct: 57602 aagtttttgacttttgagtt 57583

>emb|AL353146.9| Human DNA sequence from clone RP11-168O10 on chromosome 10 Contains the
              IFIT1 gene for interferon-induced protein with
              tetratricopeptide repeats 1, the 5' end of a variant of the
              LIPA gene for lipase A lysosomal acid cholesterol esterase
              (Wolman disease), the gene for retinoic acid- and
              interferon-inducible protein (58kD) (RI58), a novel gene,
              the gene for a novel protein similar to monocarboxylate,
              the 3' end of a novel gene and a CpG island, complete
              sequence
          Length = 126887

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    tccttcctcccttgcttgtt 329
              ||||||||||||||||||||
Sbjct: 121628 tccttcctcccttgcttgtt 121609

>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3
              Contains part of a pseudogene similar to KIAA1272,
              KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins,
              the 3' end of the CSDUFD1 gene for cystatin and DUF19
              domain containing 1, a novel gene, the FCMD gene for
              Fukuyama type congenital muscular dystrophy protein, the
              TAL2 gene for T-cell acute lymphocytic leukemia 2 protein
              and two CpG islands, complete sequence
          Length = 167005

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    gctctccttcctcccttgct 325
              ||||||||||||||||||||
Sbjct: 135525 gctctccttcctcccttgct 135544

>gb|AC131961.1| Drosophila pseudoobscura  FOSMID DPSF1-548A3 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 39990

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   gaacacttcaattattggcagcaa 134
             ||||||||||||| ||||||||||
Sbjct: 38135 gaacacttcaatttttggcagcaa 38112

>gb|AC125041.2| Mus musculus BAC clone RP23-337J19 from chromosome 12, complete sequence
          Length = 202288

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    ctctccttcctcccttgctt 326
              ||||||||||||||||||||
Sbjct: 136731 ctctccttcctcccttgctt 136750


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,646,111
Number of Sequences: 3902068
Number of extensions: 2646111
Number of successful extensions: 51959
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51902
Number of HSP's gapped (non-prelim): 50
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)