>SPD5_CAEEL (P91349) Spindle-defective protein 5|
          Length = 1198

 Score = 35.8 bits (81), Expect = 0.040
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 408 SLVLQRLAELEAKVHALEEKPSEMPCEKEELLNAAVRRVDALEAELIVTKKALHEA 241
           S +  + AELEA +H +  K  E+ CE    LN A+ RVD  +   +  + AL EA
Sbjct: 764 STLKSQFAELEANLHQVNSKLGEVRCE----LNEALARVDGEQETRVKAENALEEA 815

>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)|
          Length = 1147

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 371 RFTRLKKNLPKCLARKK-SCLMLLSAVWMHWK--LSSL*QRRLCTRLLSGKR 225
           R+     +L +CL RK   C + +   W HWK     L QR++   LL GK+
Sbjct: 664 RYPETLFHLEECLDRKDYDCTLRIQKAWRHWKSRKHQLEQRKMAADLLKGKK 715

>MRCKB_HUMAN (Q9Y5S2) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)|
           (CDC42-binding protein kinase beta) (Myotonic dystrophy
           kinase-related CDC42-binding kinase beta) (Myotonic
           dystrophy protein kinase-like beta) (MRCK beta)
           (DMPK-like beta)
          Length = 1711

 Score = 31.6 bits (70), Expect = 0.76
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = -2

Query: 405 LVLQRLAELE---AKVHALEEKPSEMPCEKEELLNAAVRRVDALEAELIVTKKALHEALI 235
           L LQ  +EL    A++ A ++K S    +KEE +  A ++VDA+  E+   +K   E   
Sbjct: 572 LALQEFSELNERMAELRAQKQKVSRQLRDKEEEMEVATQKVDAMRQEMRRAEKLRKELEA 631

Query: 234 RQEELLAYVDRK 199
           + ++ +A   ++
Sbjct: 632 QLDDAVAEASKE 643

>RAD50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase|
          Length = 876

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
 Frame = -2

Query: 399 LQRLAELEAKVHALEEKPSEMPCEKEEL------LNAAVRRVDALEAELIVTKKALH--- 247
           LQRL ++ +KV  LE + +E+    EEL      L +   R+++ E EL   K+ L    
Sbjct: 277 LQRLGDVPSKVRELENEEAELRRRIEELRNLLDDLRSLRNRLESAEEELEGVKRELEELK 336

Query: 246 -EALIRQEELLAYVDR 202
            EA +  E L+ + D+
Sbjct: 337 DEAGVDPERLVEFKDK 352

>NOG1_ENCCU (Q8SVJ8) Nucleolar GTP-binding protein 1|
          Length = 528

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -2

Query: 405 LVLQRLAELEAKVHALE-EKPSEMPCEKEELLNAAVRRVDALEAELIVTKKALHEALIRQ 229
           L L  + + +A +  LE +K  EM CEKEE ++A    V A+  +L++ ++   E  I  
Sbjct: 292 LGLSGMEDKKAIMSFLEGKKYMEMSCEKEENIDA----VKAMACDLLLDER--FERKINS 345

Query: 228 EELLAYVDRKTI 193
           E L  Y++R TI
Sbjct: 346 ERLSEYINRITI 357

>HOME2_HUMAN (Q9NSB8) Homer protein homolog 2 (Homer-2) (Cupidin)|
          Length = 354

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = -2

Query: 411 FSLVLQRLAELEAKVHALEEKPSEMPCEKEELLNAAVRRVDALEAELIVTKKALHEALIR 232
           FS+       L  K+  LEE+ SE+  EKE+      RR++ LEAEL   +  L + L +
Sbjct: 215 FSICRDENDRLRNKIDELEEQCSEINREKEKNTQLK-RRIEELEAELREKETELKD-LRK 272

Query: 231 QEELL 217
           Q E++
Sbjct: 273 QSEII 277

>POLG_CSFVB (P21530) Genome polyprotein [Contains: N-terminal protease (EC|
            3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
            E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
            (gp33); Envelope glycoprotein E2 (gp55); p7;
            Nonstructural protein 2
          Length = 3898

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 372  KVHALEEKPSEMPCEKEELLNAA 304
            KVHAL+E+   MPC  +E++++A
Sbjct: 953  KVHALDERLGPMPCRPKEIVSSA 975

>RL7A_ANOGA (O76732) 60S ribosomal protein L7a|
          Length = 271

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = -2

Query: 399 LQRL-AELEAKVHALEEKPSEMPCEKEELLNAAVRRVDALEAELIV 265
           +QRL A+ EAK    EE PS+   +  + +N+ V+ V+  +A+L++
Sbjct: 117 VQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVKMVEQKKAQLVI 162

>ZN291_HUMAN (Q9BY12) Zinc finger protein 291|
          Length = 1399

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/68 (29%), Positives = 37/68 (54%)
 Frame = -2

Query: 402 VLQRLAELEAKVHALEEKPSEMPCEKEELLNAAVRRVDALEAELIVTKKALHEALIRQEE 223
           VL +L E E +++ L+E+      EK+    A   R  ALEAE    +  + E L++++E
Sbjct: 640 VLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAE---RQARVEELLMKRKE 696

Query: 222 LLAYVDRK 199
             A ++++
Sbjct: 697 QEARIEQQ 704

>HOME2_MOUSE (Q9QWW1) Homer protein homolog 2 (Homer-2) (Cupidin)|
           (VASP/Ena-related gene up-regulated during seizure and
           LTP 2) (Vesl-2)
          Length = 354

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = -2

Query: 411 FSLVLQRLAELEAKVHALEEKPSEMPCEKEELLNAAVRRVDALEAELIVTKKALHEALIR 232
           FS+       L +K+  LEE+ SE+  EKE+      RR++ LE+E+   +  L + L +
Sbjct: 215 FSICRDENDRLRSKIEELEEQCSEINREKEKNTQLK-RRIEELESEVRDKEMELKD-LRK 272

Query: 231 QEELL 217
           Q E++
Sbjct: 273 QSEII 277

>RF1_SHEON (Q8EAR3) Peptide chain release factor 1 (RF-1)|
          Length = 363

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -2

Query: 411 FSLVLQRLAELEAKVHALEEKPSEMPCEKEELLNAAVRRVDALEAEL 271
           F    Q  A+LE+    LEE  +EM    +E + AA   ++ LEAEL
Sbjct: 52  FKAYQQAQADLESAKEMLEEDDAEMREMAQEEIKAAKVELERLEAEL 98

>SEPT6_MOUSE (Q9R1T4) Septin-6|
          Length = 433

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 342 EMPCEKEELLNAAVRRVDALEAELIVTKKALHEALIRQEEL 220
           E+  ++EE+    V+RV   EAEL   +K LHE   R ++L
Sbjct: 333 ELQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKL 373

>SEPT6_HUMAN (Q14141) Septin-6|
          Length = 433

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 342 EMPCEKEELLNAAVRRVDALEAELIVTKKALHEALIRQEEL 220
           E+  ++EE+    V+RV   EAEL   +K LHE   R ++L
Sbjct: 333 ELQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKL 373

>IF2_BARQU (Q6G0P2) Translation initiation factor IF-2|
          Length = 845

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -2

Query: 387 AELEAKVHALEEKPSEMPCEKEELLNAAVRRVDALEAELIVTKKALHEALIRQEE 223
           AE+EA++ ALEE   +    +E++   A RR+   E  L   ++A+ E  I QEE
Sbjct: 93  AEMEARLRALEEAHIQERITREKVEEQA-RRIKEREESL---RQAVQETEIHQEE 143

>POLG_CSFVA (P19712) Genome polyprotein [Contains: N-terminal protease (EC|
            3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
            E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
            (gp33); Envelope glycoprotein E2 (gp55); p7;
            Nonstructural protein 2
          Length = 3898

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 372  KVHALEEKPSEMPCEKEELLNA 307
            KVHAL+E+   MPC  +E++++
Sbjct: 953  KVHALDERLGPMPCRPKEIVSS 974

>LIRB5_HUMAN (O75023) Leukocyte immunoglobulin-like receptor subfamily B member|
           5 precursor (Leukocyte immunoglobulin-like receptor 8)
           (LIR-8) (CD85c antigen)
          Length = 590

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
 Frame = -2

Query: 378 EAKVHALEEKPSEMPCEKEELLNAAVR------------RVDALEAELIVTKKALHEALI 235
           E K   L+++ S +   +EE+LNAAV+            R  A EA   VT   LH   +
Sbjct: 503 EPKDQGLQKRASPVADIQEEILNAAVKDTQPKDGVEMDARAAASEAPQDVTYAQLHSLTL 562

Query: 234 RQE 226
           R+E
Sbjct: 563 RRE 565


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,503,896
Number of Sequences: 219361
Number of extensions: 761235
Number of successful extensions: 2371
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2369
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)