ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16h14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ000242.1|HVJ000242 Hordeum vulgare mRNA for expressed sequ... 700 0.0
2ref|XM_476651.1| Oryza sativa (japonica cultivar-group), mRNA 305 7e-80
3dbj|AK069726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 7e-80
4gb|AY106174.1| Zea mays PCO144723 mRNA sequence 285 6e-74
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
6dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
7ref|XM_705187.1| Candida albicans SC5314 Bem1-like protein (CaO1... 44 0.41
8ref|XM_705171.1| Candida albicans SC5314 Bem1-like protein (CaO1... 44 0.41
9ref|XM_602751.2| PREDICTED: Bos taurus similar to chromosome 20 ... 42 1.6
10ref|XM_866049.1| PREDICTED: Bos taurus similar to chromosome 20 ... 42 1.6
11gb|AC142114.3| Mus musculus BAC clone RP23-421C24 from chromosom... 42 1.6
12gb|AC096658.1| Homo sapiens BAC clone RP11-29C24 from 7, complet... 42 1.6
13gb|AC142307.1| Pan troglodytes BAC clone RP43-131H12 from 7, com... 42 1.6
14dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related... 42 1.6
15emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chro... 42 1.6
16gb|AC152076.4| Mus musculus BAC clone RP23-326O10 from chromosom... 40 6.3
17ref|XM_581880.2| PREDICTED: Bos taurus similar to cartilage inte... 40 6.3
18gb|AC113495.15| Mus musculus chromosome 9, clone RP23-361O11, co... 40 6.3
19gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 ma... 40 6.3
20gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosom... 40 6.3
21gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete s... 40 6.3
22gb|AC090329.6| Homo sapiens chromosome 18, clone RP11-793M6, com... 40 6.3
23emb|AL645643.7| Mouse DNA sequence from clone RP23-253F13 on chr... 40 6.3
24gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, com... 40 6.3
25gb|AC093328.3| Homo sapiens chromosome 8, clone RP11-30J20, comp... 40 6.3
26gb|AC161113.2| Mus musculus BAC clone RP24-362N9 from chromosome... 40 6.3
27dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
28gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, comple... 40 6.3
29gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complet... 40 6.3
30gb|AF445393.1|F445385S08 Homo sapiens MAP4K3 (MAP4K3) gene, exon... 40 6.3
31emb|AL772137.8| Mouse DNA sequence from clone RP23-229A22 on chr... 40 6.3
32emb|CT025670.8| Mouse DNA sequence from clone RP24-384G18 on chr... 40 6.3 
>emb|AJ000242.1|HVJ000242 Hordeum vulgare mRNA for expressed sequence tag
          Length = 774

 Score =  700 bits (353), Expect = 0.0
 Identities = 362/366 (98%)
 Strand = Plus / Minus

                                                                       
Query: 104 ggagacctccggtgccgggtctcgtcgccttcagctatgctaccctctggcttccacatg 163
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ggagacctccggtgccgggtctcgtcgccttcagctatgctaccctctggcttccacatg 715

                                                                       
Query: 164 acgtccttcaggccattcgagatactatggtnaaacttgtggaattcnatggtgtcgcca 223
           ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||
Sbjct: 714 acgtccttcaggccattcgagatactatggtaaaacttgtggaattcgagggtgtcgcca 655

                                                                       
Query: 224 ttcgacttgcggagctccaccatgtatagngagggtgtcacttcaaaaacctctgttgca 283
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 654 ttcgacttgcggagctccaccatgtatagtgagggtgtcacttcaaaaacctctgttgca 595

                                                                       
Query: 284 atcgccagctgacctttccttccaggattctctccttgcaacttcagcttgtagttgcgc 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 atcgccagctgacctttccttccaggattctctccttgcaacttcagcttgtagttgcgc 535

                                                                       
Query: 344 ttctgtacattgaagcccatgggtcctgctgctgcttcaattttcgacaatatttcattt 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttctgtacattgaagcccatgggtcctgctgctgcttcaattttcgacaatatttcattt 475

                                                                       
Query: 404 gctggaagcctcgatgcaaaccgtgtttcacgtttaacagaatcagtttgcttctcaaaa 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gctggaagcctcgatgcaaaccgtgtttcacgtttaacagaatcagtttgcttctcaaaa 415

                 
Query: 464 agggtg 469
           ||||||
Sbjct: 414 agggtg 409
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>ref|XM_476651.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1893

 Score =  305 bits (154), Expect = 7e-80
 Identities = 268/307 (87%)
 Strand = Plus / Minus

                                                                        
Query: 139  tatgctaccctctggcttccacatgacgtccttcaggccattcgagatactatggtnaaa 198
            |||||||| ||| ||||||||||| || || ||||||||||| |||||  | ||||  ||
Sbjct: 1595 tatgctactctccggcttccacatcacatctttcaggccattggagatgttgtggtagaa 1536

                                                                        
Query: 199  cttgtggaattcnatggtgtcgccattcgacttgcggagctccaccatgtatagngaggg 258
            ||| |||||||| |  |||||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1535 cttatggaattcaagagtgtcgccgttagatttgcggagctcaaccatgtacagcgaggg 1476

                                                                        
Query: 259  tgtcacttcaaaaacctctgttgcaatcgccagctgacctttccttccaggattctctcc 318
             || ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 1475 cgtgacttcaaaaacctctgttgcaattgcaagctgacctttccttcctggattctctcc 1416

                                                                        
Query: 319  ttgcaacttcagcttgtagttgcgcttctgtacattgaagcccatgggtcctgctgctgc 378
            |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 1415 ttgcaacttcagcttgtagttgcgcttctgtacattaaagcccatgggtccagcagctgc 1356

                                                                        
Query: 379  ttcaattttcgacaatatttcatttgctggaagcctcgatgcaaaccgtgtttcacgttt 438
            |||||||||||||||||| || ||||| || ||||| |||||||| | |||||| || ||
Sbjct: 1355 ttcaattttcgacaatatctcgtttgcaggcagccttgatgcaaatcttgtttctcgctt 1296

                   
Query: 439  aacagaa 445
             ||||||
Sbjct: 1295 cacagaa 1289
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>dbj|AK069726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M13, full
            insert sequence
          Length = 1894

 Score =  305 bits (154), Expect = 7e-80
 Identities = 268/307 (87%)
 Strand = Plus / Minus

                                                                        
Query: 139  tatgctaccctctggcttccacatgacgtccttcaggccattcgagatactatggtnaaa 198
            |||||||| ||| ||||||||||| || || ||||||||||| |||||  | ||||  ||
Sbjct: 1594 tatgctactctccggcttccacatcacatctttcaggccattggagatgttgtggtagaa 1535

                                                                        
Query: 199  cttgtggaattcnatggtgtcgccattcgacttgcggagctccaccatgtatagngaggg 258
            ||| |||||||| |  |||||||| || || ||||||||||| |||||||| || |||||
Sbjct: 1534 cttatggaattcaagagtgtcgccgttagatttgcggagctcaaccatgtacagcgaggg 1475

                                                                        
Query: 259  tgtcacttcaaaaacctctgttgcaatcgccagctgacctttccttccaggattctctcc 318
             || ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 1474 cgtgacttcaaaaacctctgttgcaattgcaagctgacctttccttcctggattctctcc 1415

                                                                        
Query: 319  ttgcaacttcagcttgtagttgcgcttctgtacattgaagcccatgggtcctgctgctgc 378
            |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 1414 ttgcaacttcagcttgtagttgcgcttctgtacattaaagcccatgggtccagcagctgc 1355

                                                                        
Query: 379  ttcaattttcgacaatatttcatttgctggaagcctcgatgcaaaccgtgtttcacgttt 438
            |||||||||||||||||| || ||||| || ||||| |||||||| | |||||| || ||
Sbjct: 1354 ttcaattttcgacaatatctcgtttgcaggcagccttgatgcaaatcttgtttctcgctt 1295

                   
Query: 439  aacagaa 445
             ||||||
Sbjct: 1294 cacagaa 1288
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>gb|AY106174.1| Zea mays PCO144723 mRNA sequence
          Length = 1844

 Score =  285 bits (144), Expect = 6e-74
 Identities = 300/353 (84%)
 Strand = Plus / Minus

                                                                        
Query: 107  gacctccggtgccgggtctcgtcgccttcagctatgctaccctctggcttccacatgacg 166
            |||||||  ||||| | ||||||||||||  | ||||  | ||| ||||||||||| |||
Sbjct: 1692 gacctcctttgccgcgcctcgtcgccttccacgatgccgctctccggcttccacatcacg 1633

                                                                        
Query: 167  tccttcaggccattcgagatactatggtnaaacttgtggaattcnatggtgtcgccattc 226
            |||||||| ||||| |||||  | ||||  |||||||||||||| | ||||||||| || 
Sbjct: 1632 tccttcagtccatttgagatgttgtggtagaacttgtggaattcaagggtgtcgccgttg 1573

                                                                        
Query: 227  gacttgcggagctccaccatgtatagngagggtgtcacttcaaaaacctctgttgcaatc 286
            |||||||| ||||| |||||||| || || || || || || |||||||||||||| || 
Sbjct: 1572 gacttgcgcagctcaaccatgtacagggaaggcgtgacctcgaaaacctctgttgcgatg 1513

                                                                        
Query: 287  gccagctgacctttccttccaggattctctccttgcaacttcagcttgtagttgcgcttc 346
            ||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||
Sbjct: 1512 gccagctgacctttccttccagggttctccccttgcagcttcagcttatagttgcgcttc 1453

                                                                        
Query: 347  tgtacattgaagcccatgggtcctgctgctgcttcaattttcgacaatatttcatttgct 406
            || || ||||||||||||||||| ||||||||||| || ||||||| ||| |||||||| 
Sbjct: 1452 tgaacgttgaagcccatgggtcccgctgctgcttcgatcttcgacagtatctcatttgca 1393

                                                                 
Query: 407  ggaagcctcgatgcaaaccgtgtttcacgtttaacagaatcagtttgcttctc 459
            |||||||| || ||||||| |||||| || ||||||||| | |||||||||||
Sbjct: 1392 ggaagccttgacgcaaaccttgtttctcgcttaacagaacccgtttgcttctc 1340
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                           
Query: 331     cttgtagttgcgcttctgtacattgaagcccatgggtcctgctgctgcttcaattttcga 390
               |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 2676485 cttgtagttgcgcttctgtacattaaagcccatgggtccagcagctgcttcaattttcga 2676544

                                                                      
Query: 391     caatatttcatttgctggaagcctcgatgcaaaccgtgtttcacgtttaacagaa 445
               |||||| || ||||| || ||||| |||||||| | |||||| || || ||||||
Sbjct: 2676545 caatatctcgtttgcaggcagccttgatgcaaatcttgtttctcgcttcacagaa 2676599



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                           
Query: 272     acctctgttgcaatcgccagctgacctttccttccaggattctctccttgcaacttcagc 331
               |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2676337 acctctgttgcaattgcaagctgacctttccttcctggattctctccttgcaacttcagc 2676396

                
Query: 332     t 332
               |
Sbjct: 2676397 t 2676397



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                           
Query: 203     tggaattcnatggtgtcgccattcgacttgcggagctccaccatgtatagngagggtgtc 262
               |||||||| |  |||||||| || || ||||||||||| |||||||| || ||||| || 
Sbjct: 2676150 tggaattcaagagtgtcgccgttagatttgcggagctcaaccatgtacagcgagggcgtg 2676209

                            
Query: 263     acttcaaaaacct 275
               |||||||||||||
Sbjct: 2676210 acttcaaaaacct 2676222



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 139     tatgctaccctctggcttccacatgacgtccttcaggccattcgagat 186
               |||||||| ||| ||||||||||| || || ||||||||||| |||||
Sbjct: 2675990 tatgctactctccggcttccacatcacatctttcaggccattggagat 2676037
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>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1027_G06
          Length = 121885

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                          
Query: 331    cttgtagttgcgcttctgtacattgaagcccatgggtcctgctgctgcttcaattttcga 390
              |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 102203 cttgtagttgcgcttctgtacattaaagcccatgggtccagcagctgcttcaattttcga 102262

                                                                     
Query: 391    caatatttcatttgctggaagcctcgatgcaaaccgtgtttcacgtttaacagaa 445
              |||||| || ||||| || ||||| |||||||| | |||||| || || ||||||
Sbjct: 102263 caatatctcgtttgcaggcagccttgatgcaaatcttgtttctcgcttcacagaa 102317



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                          
Query: 272    acctctgttgcaatcgccagctgacctttccttccaggattctctccttgcaacttcagc 331
              |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 102055 acctctgttgcaattgcaagctgacctttccttcctggattctctccttgcaacttcagc 102114

               
Query: 332    t 332
              |
Sbjct: 102115 t 102115



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                          
Query: 203    tggaattcnatggtgtcgccattcgacttgcggagctccaccatgtatagngagggtgtc 262
              |||||||| |  |||||||| || || ||||||||||| |||||||| || ||||| || 
Sbjct: 101868 tggaattcaagagtgtcgccgttagatttgcggagctcaaccatgtacagcgagggcgtg 101927

                           
Query: 263    acttcaaaaacct 275
              |||||||||||||
Sbjct: 101928 acttcaaaaacct 101940



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 139    tatgctaccctctggcttccacatgacgtccttcaggccattcgagat 186
              |||||||| ||| ||||||||||| || || ||||||||||| |||||
Sbjct: 101708 tatgctactctccggcttccacatcacatctttcaggccattggagat 101755
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>ref|XM_705187.1| Candida albicans SC5314 Bem1-like protein (CaO19.177), mRNA
          Length = 1453

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 376 tgcttcaattttcgacaatatttcat 401
           |||||||||||| |||||||||||||
Sbjct: 663 tgcttcaattttagacaatatttcat 638
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>ref|XM_705171.1| Candida albicans SC5314 Bem1-like protein (CaO19.7810), mRNA
          Length = 1453

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 376 tgcttcaattttcgacaatatttcat 401
           |||||||||||| |||||||||||||
Sbjct: 663 tgcttcaattttagacaatatttcat 638
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>ref|XM_602751.2| PREDICTED: Bos taurus similar to chromosome 20 open reading frame 42,
            transcript variant 1 (LOC524427), mRNA
          Length = 4362

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 401  tttgctggaagcctcgatgca 421
            |||||||||||||||||||||
Sbjct: 2743 tttgctggaagcctcgatgca 2723
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>ref|XM_866049.1| PREDICTED: Bos taurus similar to chromosome 20 open reading frame 42,
            transcript variant 2 (LOC524427), mRNA
          Length = 4471

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 401  tttgctggaagcctcgatgca 421
            |||||||||||||||||||||
Sbjct: 2852 tttgctggaagcctcgatgca 2832
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>gb|AC142114.3| Mus musculus BAC clone RP23-421C24 from chromosome 14, complete
             sequence
          Length = 196408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 287   gccagctgacctttccttcca 307
             |||||||||||||||||||||
Sbjct: 89406 gccagctgacctttccttcca 89426
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>gb|AC096658.1| Homo sapiens BAC clone RP11-29C24 from 7, complete sequence
          Length = 77142

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 298  tttccttccaggattctctccttgc 322
            ||||||||||||||| |||||||||
Sbjct: 7784 tttccttccaggattttctccttgc 7808
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>gb|AC142307.1| Pan troglodytes BAC clone RP43-131H12 from 7, complete sequence
          Length = 158646

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 298   tttccttccaggattctctccttgc 322
             ||||||||||||||| |||||||||
Sbjct: 43322 tttccttccaggattttctccttgc 43298
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>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon
              cluster
          Length = 249555

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 346    ctgtacattgaagcccatggg 366
              |||||||||||||||||||||
Sbjct: 178446 ctgtacattgaagcccatggg 178466
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>emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chromosome 2, complete
             sequence
          Length = 181014

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 139   tatgctaccctctggcttccacatg 163
             |||||| ||||||||||||||||||
Sbjct: 63668 tatgctgccctctggcttccacatg 63692
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>gb|AC152076.4| Mus musculus BAC clone RP23-326O10 from chromosome 18, complete
             sequence
          Length = 215816

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   taccctctggcttccacatg 163
             ||||||||||||||||||||
Sbjct: 85547 taccctctggcttccacatg 85528
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>ref|XM_581880.2| PREDICTED: Bos taurus similar to cartilage intermediate layer
            protein, nucleotide pyrophosphohydrolase (LOC505573),
            mRNA
          Length = 5526

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  ctctggcttccacatgacgt 167
            ||||||||||||||||||||
Sbjct: 4837 ctctggcttccacatgacgt 4818
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>gb|AC113495.15| Mus musculus chromosome 9, clone RP23-361O11, complete sequence
          Length = 195356

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    accctctggcttccacatga 164
              ||||||||||||||||||||
Sbjct: 112273 accctctggcttccacatga 112292
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>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence
          Length = 191014

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 140    atgctaccctctggcttccacatg 163
              |||||| |||||||||||||||||
Sbjct: 125165 atgctatcctctggcttccacatg 125188
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>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence
          Length = 210014

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 140    atgctaccctctggcttccacatg 163
              |||||| |||||||||||||||||
Sbjct: 153532 atgctatcctctggcttccacatg 153555
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>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence
          Length = 116810

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ctgctgctgcttcaattttc 388
             ||||||||||||||||||||
Sbjct: 74212 ctgctgctgcttcaattttc 74193
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>gb|AC090329.6| Homo sapiens chromosome 18, clone RP11-793M6, complete sequence
          Length = 141741

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   atttcatttgctggaagcct 414
             ||||||||||||||||||||
Sbjct: 19488 atttcatttgctggaagcct 19507
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>emb|AL645643.7| Mouse DNA sequence from clone RP23-253F13 on chromosome 13 Contains part
              of the Gmds gene for GDP-mannose 4, 6-dehydratase, complete
              sequence
          Length = 185384

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 151    tggcttccacatgacgtccttcag 174
              ||||||||| ||||||||||||||
Sbjct: 154813 tggcttccagatgacgtccttcag 154790
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>gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, complete sequence
          Length = 163126

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   tgctaccctctggcttccacatga 164
             |||||||||||||| |||||||||
Sbjct: 29768 tgctaccctctggcctccacatga 29791
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>gb|AC093328.3| Homo sapiens chromosome 8, clone RP11-30J20, complete sequence
          Length = 163640

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    atagaacatgaaaaaacatccata 41
             |||||||||||||||||| |||||
Sbjct: 99066 atagaacatgaaaaaacaaccata 99089
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>gb|AC161113.2| Mus musculus BAC clone RP24-362N9 from chromosome 9, complete sequence
          Length = 171642

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   accctctggcttccacatga 164
             ||||||||||||||||||||
Sbjct: 47063 accctctggcttccacatga 47082
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 67       ttttatcttctacctcctaacatt 90
                |||| |||||||||||||||||||
Sbjct: 18881681 ttttttcttctacctcctaacatt 18881658
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>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 446    tcagtttgcttctcaaaaag 465
              ||||||||||||||||||||
Sbjct: 133682 tcagtttgcttctcaaaaag 133701
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>gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complete sequence
          Length = 166660

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     aggactttcctgaggttcct 60
              ||||||||||||||||||||
Sbjct: 100499 aggactttcctgaggttcct 100518
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>gb|AF445393.1|F445385S08 Homo sapiens MAP4K3 (MAP4K3) gene, exons 9 through 12
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 446  tcagtttgcttctcaaaaag 465
            ||||||||||||||||||||
Sbjct: 1326 tcagtttgcttctcaaaaag 1345
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>emb|AL772137.8| Mouse DNA sequence from clone RP23-229A22 on chromosome 4, complete
            sequence
          Length = 165975

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 140  atgctaccctctggcttccacatg 163
            ||||||||||||||| ||||||||
Sbjct: 7045 atgctaccctctggcctccacatg 7068
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>emb|CT025670.8| Mouse DNA sequence from clone RP24-384G18 on chromosome 17, complete
              sequence
          Length = 199300

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 325    cttcagcttgtagttgcgcttctg 348
              ||||||||| ||||||||||||||
Sbjct: 167072 cttcagcttctagttgcgcttctg 167095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,223,967
Number of Sequences: 3902068
Number of extensions: 4223967
Number of successful extensions: 75133
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75044
Number of HSP's gapped (non-prelim): 89
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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