| Clone Name | rbags16h12 |
|---|---|
| Clone Library Name | barley_pub |
>ERG1_PANGI (O48651) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 539 Score = 88.2 bits (217), Expect = 6e-18 Identities = 40/49 (81%), Positives = 44/49 (89%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGVGRLM 2 MR ACFDYLSL G+CS GPIALLSGLNPRP+SL HFFAVAI+GVGRL+ Sbjct: 440 MRNACFDYLSLGGICSQGPIALLSGLNPRPISLFLHFFAVAIYGVGRLL 488
>ERG12_BRANA (O65726) Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene| epoxidase 1,2) (SE 1,2) Length = 518 Score = 59.3 bits (142), Expect = 3e-09 Identities = 25/49 (51%), Positives = 36/49 (73%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGVGRLM 2 MRQ CFDYLS G ++G +AL+ G+NPRPLSL H F +++ +G+L+ Sbjct: 416 MRQGCFDYLSSGGFRTSGLMALIGGMNPRPLSLFYHLFVISLSSIGQLL 464
>ERG1_HUMAN (Q14534) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 574 Score = 58.9 bits (141), Expect = 4e-09 Identities = 26/45 (57%), Positives = 33/45 (73%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGV 14 +R+ACF Y L G C GP+ LLS L+P PL+L+ HFFAVAI+ V Sbjct: 487 LRKACFLYFKLGGECVAGPVGLLSVLSPNPLALIGHFFAVAIYAV 531
>ERG11_BRANA (O65727) Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene| epoxidase 1,1) (SE 1,1) Length = 506 Score = 58.5 bits (140), Expect = 5e-09 Identities = 25/49 (51%), Positives = 35/49 (71%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGVGRLM 2 MRQ CFDYLS G ++G +ALL G+NPRPLSL+ H + + +G+L+ Sbjct: 415 MRQGCFDYLSSGGFRTSGMMALLGGMNPRPLSLIFHLCGITLSSIGQLL 463
>ERG11_ARATH (O65404) Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene| epoxidase 1,1) (SE 1,1) Length = 516 Score = 57.8 bits (138), Expect = 8e-09 Identities = 24/49 (48%), Positives = 35/49 (71%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGVGRLM 2 MRQ C+DYLS G ++G +ALL G+NPRP+SL+ H A+ + +G L+ Sbjct: 414 MRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIYHLCAITLSSIGHLL 462
>ERG1_MOUSE (P52019) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 572 Score = 55.1 bits (131), Expect = 5e-08 Identities = 24/43 (55%), Positives = 31/43 (72%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIF 20 +R+ACF Y L G C GP+ LLS L+P PL L+ HFF+VAI+ Sbjct: 485 LRKACFLYFKLGGECVTGPVGLLSILSPHPLVLIRHFFSVAIY 527
>ERG1_RAT (P52020) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 573 Score = 53.9 bits (128), Expect = 1e-07 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIF 20 +R+ACF Y L G C GP+ LLS L+P PL L+ HFF+VA++ Sbjct: 486 LRKACFLYFKLGGECLTGPVGLLSILSPDPLLLIRHFFSVAVY 528
>ERG12_ARATH (O65402) Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene| epoxidase 1,2) (SE 1,2) Length = 517 Score = 53.5 bits (127), Expect = 2e-07 Identities = 24/49 (48%), Positives = 34/49 (69%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGVGRLM 2 MRQ +DYL G ++G +ALL G+NPRPLSLV H A+ + +G+L+ Sbjct: 415 MRQGVYDYLCSGGFRTSGMMALLGGMNPRPLSLVYHLCAITLSSIGQLL 463
>ERG1_CANAL (Q92206) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 496 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/45 (51%), Positives = 28/45 (62%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGV 14 +R CF Y G C NGPI LLSG+ P P+ L HFF+VA + V Sbjct: 412 LRNGCFKYFQRGGECVNGPIGLLSGMLPFPMLLFNHFFSVAFYSV 456
>ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99.7) (Squalene| epoxidase) (SE) Length = 457 Score = 48.1 bits (113), Expect = 6e-06 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGV 14 + C DY G C GPI LL GL+ P L+ HF+AV ++G+ Sbjct: 373 LESGCIDYFKRGGNCVEGPIRLLGGLDHSPSHLIGHFYAVCLYGI 417
>ERG13_ARATH (O65403) Squalene monooxygenase 2 (EC 1.14.99.7) (Squalene| epoxidase 2) (SE 2) Length = 516 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/49 (40%), Positives = 31/49 (63%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGVGRLM 2 MRQ CF+YL+ + G + +L G+NP PL+LV H A+ + +G L+ Sbjct: 414 MRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLTSMGHLL 462
>ERG1_YEAST (P32476) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 496 Score = 45.1 bits (105), Expect = 5e-05 Identities = 19/45 (42%), Positives = 27/45 (60%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGV 14 +++ CF Y G C N P+ LSG+ P+PL L FFAVA + + Sbjct: 412 LQKGCFKYFQRGGDCVNKPVEFLSGVLPKPLQLTRVFFAVAFYTI 456
>ERG1_CANGA (O13306) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 489 Score = 44.3 bits (103), Expect = 9e-05 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGV 14 +++ CF Y G C N P+A L+G+ P+PL L FFAVA + + Sbjct: 405 LQKGCFKYFQRGGDCVNLPVAFLAGVLPKPLLLTRVFFAVAFYTI 449
>ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 497 Score = 35.8 bits (81), Expect = 0.033 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -1 Query: 148 MRQACFDYLSLXGVCSNGPIALLSGLNPRPLSLVAHFFAVAIFGV 14 +++ CF+YL PI+ LSG+ P P L FF VA++ V Sbjct: 413 LQKGCFEYLGRGEDWVRQPISFLSGVLPSPYLLTKVFFTVALYSV 457 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,778,009 Number of Sequences: 219361 Number of extensions: 248117 Number of successful extensions: 694 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 682 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 691 length of database: 80,573,946 effective HSP length: 24 effective length of database: 75,309,282 effective search space used: 1807422768 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)