ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 40 0.002
2GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX) ... 30 1.8
3POLG_PVYC (P22601) Genome polyprotein [Contains: P1 proteinase (... 29 2.4
4OPGD_XANCP (Q8P3C6) Glucans biosynthesis protein D precursor 29 2.4
5OPGD_XANAC (Q8PEQ6) Glucans biosynthesis protein D precursor 29 2.4
6C71AO_ARATH (Q9STK9) Cytochrome P450 71A24 (EC 1.14.-.-) 29 3.1
7V120_HHV11 (P10221) Capsid assembly protein UL37 28 4.0
8APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 28 4.0
9OPGD_XYLFA (Q9PA38) Glucans biosynthesis protein D precursor 28 4.0
10FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 27 9.0

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 396 CANPATRINWDGIHMTETAYMYIAAGWLWGPYAQPPI 286
           CA P+ R+NWDG H TE A  Y       G ++ PP+
Sbjct: 337 CACPSVRVNWDGAHYTEAANEYFFDQISTGAFSDPPV 373



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>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)|
           (Endo-1,4-beta-glucanase) (Cellulase) (Fragment)
          Length = 224

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 381 TRINWDGIHMTETAYMYIAAGW 316
           T I+WDG+H++E  Y  IA  W
Sbjct: 112 TDISWDGLHLSEIGYTKIANIW 133



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>POLG_PVYC (P22601) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3] (Fragment)
          Length = 856

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 271 WHGLENRRLRVRAPEPTGGDVHVCSLRHVDAVPVDTCGGVSA 396
           W GL++   R+R P       H C    +D +PV+ CG V+A
Sbjct: 291 WKGLDDNWARMRYPSD-----HTC----IDGLPVEDCGRVAA 323



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>OPGD_XANCP (Q8P3C6) Glucans biosynthesis protein D precursor|
          Length = 533

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = -3

Query: 378 RINWDG---IHMTETAYMYIAAG-WLWGPYAQPPILK 280
           R++WD    IH T+   M+   G W+W P   PP L+
Sbjct: 280 RMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHLR 316



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>OPGD_XANAC (Q8PEQ6) Glucans biosynthesis protein D precursor|
          Length = 533

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = -3

Query: 378 RINWDG---IHMTETAYMYIAAG-WLWGPYAQPPILK 280
           R++WD    IH T+   M+   G W+W P   PP L+
Sbjct: 280 RMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHLR 316



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>C71AO_ARATH (Q9STK9) Cytochrome P450 71A24 (EC 1.14.-.-)|
          Length = 486

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 385 RHTYQLGRHPHDGDCIHVHRRRLALGPLRATAYSQGHATIYGSQD 251
           R+ +QLGRHPH   C   HR     GPL    +      +  S D
Sbjct: 42  RNLHQLGRHPHRSLCSLSHR----YGPLMLLHFGSVPVLVVSSAD 82



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>V120_HHV11 (P10221) Capsid assembly protein UL37|
          Length = 1123

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 256  EIHRSWHGLENRRLRVRAPEPTGGDVHVCSLRHVDA 363
            E+H +W GL+  R  V AP  +  D    ++R V A
Sbjct: 932  ELHDTWKGLQTERAVVVAPLVSSADQRAAAIREVMA 967



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 396 CANPATRINWDGIHMTETAYMYI 328
           C N ++ + WDG+H T+ AY  I
Sbjct: 498 CPNTSSYLFWDGVHPTQRAYKTI 520



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>OPGD_XYLFA (Q9PA38) Glucans biosynthesis protein D precursor|
          Length = 537

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = -3

Query: 378 RINWDG---IHMTETAYMYIAAG-WLWGPYAQPPILK 280
           R+ WD    IH T+  ++    G W+W P   PP L+
Sbjct: 283 RMGWDWRPEIHDTDGLFLLTGNGEWIWRPLCNPPYLR 319



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 396 CANPATRINWDGIHMTETAYMYI 328
           C  P   + WDG+H T+ A  +I
Sbjct: 335 CDEPDKAVVWDGVHFTQAANKFI 357


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,022,010
Number of Sequences: 219361
Number of extensions: 944373
Number of successful extensions: 2022
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2022
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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